View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3843_low_21 (Length: 238)
Name: NF3843_low_21
Description: NF3843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3843_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 37245039 - 37245264
Alignment:
| Q |
1 |
tacacactatatactgtacatgaagtaacctctctattagatattttgtgcatgcttcaatcattgctcttaccataagcaagatgcatcatcttcagga |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37245039 |
tacacactatatactgtacatgaagtaacctctccattagatattttgtgcatgcttcaatcattgctcttaccataagcaagatgcatcatcttcagga |
37245138 |
T |
|
| Q |
101 |
attaaaggactcctacaaagtggacatgtaatgttccaataatccaaccacttctccaaacacactttatgaaaaacatggccacatgatatgcaatagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37245139 |
attaaaggactcctacaaagtggacatgtaatgttccaataatccaaccacttctccaaacacactttatgaaaaacatggccacatgatatgcaatagt |
37245238 |
T |
|
| Q |
201 |
ttatctctgattcaggttcaaattga |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
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|
| T |
37245239 |
ttatctctgattcaggttcaaattga |
37245264 |
T |
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