View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3845_low_30 (Length: 217)
Name: NF3845_low_30
Description: NF3845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3845_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 12312642 - 12312457
Alignment:
| Q |
14 |
cagagagtttgcttccttcaacttccaatcttctcaaatgtgaacaattcttaacaaagagttcaatagccttagattctatccccaaacaatgcataac |
113 |
Q |
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| T |
12312642 |
cagagagtttgcttccttcaacttccaatcttctcaaatgtgaacaattcttaacaaagagttcaatagccatagattctatccccaaacaatgcataac |
12312543 |
T |
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| Q |
114 |
atcaacattttcaagtctcttgcaactcctaaccatggtaaccaatgccaaattagtaagtcctttacaccctctaaccttcaaat |
199 |
Q |
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| T |
12312542 |
atcaacattttcaagtctcttgcaactcctaaccatggtaaccaatgccaaattagtaagccctttacaccctctaaccttcaaat |
12312457 |
T |
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