View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3849_high_28 (Length: 266)
Name: NF3849_high_28
Description: NF3849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3849_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 7118402 - 7118671
Alignment:
| Q |
11 |
cacagagcctagaacctttgatttagtaagtatatatttttgttagtgttaccgaatgattttgtcagagttagtgaaatgatgttttgtatct------ |
104 |
Q |
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| T |
7118402 |
cacacagcctagaacctttgatttagtaagtatatatttttgttagtgttactgaatgattttgtcagagttagtgaaatgatgttttgtatcttgagat |
7118501 |
T |
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| Q |
105 |
---------tttaaacctatttcaacacatgtaagttgataattacttatatttatatcaacgtggttacaatcacaaataaaaaacatttaagcataca |
195 |
Q |
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| T |
7118502 |
ctttgatcttttaaacctatttcaacacatgtaagttgataaatacttatatttatatcaacgtggttacaatcacaaattaaaaacatttaagcataca |
7118601 |
T |
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| Q |
196 |
cataagagtaatcatttaattatatattaaaaatgtgtatgtttagtttcacttatagaggggccaatat |
265 |
Q |
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| T |
7118602 |
cataagagtaatcatttaattatatattaaaaatgtgtatgtttagtttcacttatagaggggccaatat |
7118671 |
T |
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