View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3850_low_5 (Length: 316)

Name: NF3850_low_5
Description: NF3850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3850_low_5
NF3850_low_5
[»] scaffold0026 (2 HSPs)
scaffold0026 (13-281)||(11834-12102)
scaffold0026 (13-265)||(111491-111741)
[»] chr7 (29 HSPs)
chr7 (13-269)||(18873164-18873420)
chr7 (13-264)||(15167979-15168230)
chr7 (13-260)||(10895795-10896042)
chr7 (13-268)||(14422789-14423043)
chr7 (13-275)||(12709833-12710095)
chr7 (13-275)||(13122904-13123166)
chr7 (13-264)||(16009382-16009631)
chr7 (25-275)||(13743526-13743774)
chr7 (55-275)||(12590633-12590851)
chr7 (55-275)||(13007280-13007497)
chr7 (68-262)||(16677152-16677348)
chr7 (68-262)||(17651388-17651584)
chr7 (209-301)||(21230923-21231015)
chr7 (209-288)||(20311026-20311107)
chr7 (209-264)||(11382871-11382926)
chr7 (209-264)||(11389348-11389403)
chr7 (209-301)||(148619-148711)
chr7 (145-264)||(13679428-13679548)
chr7 (210-265)||(2971254-2971309)
chr7 (210-265)||(20906461-20906516)
chr7 (210-264)||(11311059-11311113)
chr7 (229-270)||(831628-831669)
chr7 (229-270)||(1196808-1196849)
chr7 (229-270)||(34958578-34958619)
chr7 (208-264)||(46625961-46626017)
chr7 (210-265)||(29181109-29181164)
chr7 (212-265)||(31155396-31155449)
chr7 (181-265)||(14319629-14319713)
chr7 (213-265)||(16091078-16091130)
[»] chr5 (17 HSPs)
chr5 (13-269)||(22750945-22751201)
chr5 (13-301)||(38144500-38144786)
chr5 (13-264)||(28370055-28370304)
chr5 (13-264)||(19512191-19512441)
chr5 (55-269)||(23528478-23528690)
chr5 (209-288)||(22438723-22438803)
chr5 (209-301)||(42961566-42961658)
chr5 (200-264)||(18407944-18408008)
chr5 (200-264)||(23111200-23111264)
chr5 (249-301)||(1856445-1856497)
chr5 (249-301)||(21674415-21674467)
chr5 (210-265)||(19236900-19236955)
chr5 (150-276)||(34830024-34830150)
chr5 (212-265)||(22461158-22461211)
chr5 (212-265)||(22467782-22467835)
chr5 (210-265)||(20781744-20781799)
chr5 (236-265)||(17021913-17021942)
[»] chr3 (29 HSPs)
chr3 (13-264)||(14762758-14763009)
chr3 (15-262)||(38310802-38311049)
chr3 (32-262)||(20247791-20248021)
chr3 (25-262)||(24192771-24193009)
chr3 (13-264)||(9534133-9534382)
chr3 (13-265)||(23370505-23370756)
chr3 (13-262)||(55499104-55499353)
chr3 (96-288)||(16801444-16801635)
chr3 (13-265)||(24933828-24934077)
chr3 (55-275)||(41455087-41455305)
chr3 (203-264)||(18929239-18929300)
chr3 (200-264)||(17240513-17240577)
chr3 (249-301)||(24122221-24122273)
chr3 (249-301)||(13967762-13967814)
chr3 (249-301)||(13973237-13973289)
chr3 (210-265)||(13302240-13302295)
chr3 (210-265)||(13323787-13323842)
chr3 (151-265)||(10389443-10389557)
chr3 (151-265)||(10414532-10414646)
chr3 (151-265)||(10421202-10421316)
chr3 (210-265)||(12033444-12033499)
chr3 (210-265)||(13312896-13312951)
chr3 (210-265)||(17131732-17131787)
chr3 (210-265)||(51301589-51301644)
chr3 (210-265)||(14865846-14865901)
chr3 (230-265)||(23392819-23392854)
chr3 (208-262)||(16801027-16801081)
chr3 (229-265)||(2247649-2247685)
chr3 (214-270)||(10833303-10833359)
[»] scaffold1773 (1 HSPs)
scaffold1773 (13-272)||(983-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-272)||(49984-50241)
[»] chr6 (32 HSPs)
chr6 (31-264)||(23057760-23057993)
chr6 (13-275)||(29614136-29614398)
chr6 (13-301)||(18800242-18800529)
chr6 (13-264)||(23839003-23839253)
chr6 (13-275)||(10986170-10986431)
chr6 (29-264)||(4477678-4477912)
chr6 (130-275)||(930085-930229)
chr6 (13-262)||(21565214-21565462)
chr6 (55-275)||(12168211-12168428)
chr6 (55-275)||(19287120-19287337)
chr6 (55-275)||(19785859-19786076)
chr6 (55-275)||(19878304-19878521)
chr6 (55-275)||(19884080-19884297)
chr6 (151-265)||(34639986-34640100)
chr6 (151-265)||(34646660-34646774)
chr6 (209-301)||(24512807-24512899)
chr6 (151-265)||(25469704-25469816)
chr6 (54-264)||(9187338-9187550)
chr6 (208-264)||(25348486-25348542)
chr6 (181-265)||(31252394-31252478)
chr6 (208-262)||(25598643-25598697)
chr6 (208-264)||(25397172-25397228)
chr6 (208-264)||(19471335-19471391)
chr6 (250-301)||(933615-933666)
chr6 (208-262)||(2286769-2286823)
chr6 (176-265)||(11288668-11288758)
chr6 (230-264)||(18659450-18659484)
chr6 (230-264)||(24441673-24441707)
chr6 (212-265)||(15458492-15458545)
chr6 (212-265)||(15465087-15465140)
chr6 (237-265)||(28288509-28288537)
chr6 (230-270)||(29415551-29415591)
[»] chr4 (17 HSPs)
chr4 (13-275)||(8045822-8046083)
chr4 (10-275)||(11847908-11848179)
chr4 (151-265)||(53483646-53483760)
chr4 (209-301)||(15408139-15408231)
chr4 (104-265)||(27906159-27906321)
chr4 (208-264)||(8834895-8834951)
chr4 (208-264)||(13888641-13888697)
chr4 (181-262)||(14486632-14486713)
chr4 (208-264)||(15245215-15245271)
chr4 (208-259)||(22724691-22724742)
chr4 (229-270)||(15747551-15747592)
chr4 (208-264)||(15308120-15308176)
chr4 (210-265)||(16146830-16146885)
chr4 (250-301)||(43284008-43284059)
chr4 (234-264)||(15069781-15069811)
chr4 (234-264)||(15076381-15076411)
chr4 (208-265)||(14912081-14912138)
[»] scaffold0029 (1 HSPs)
scaffold0029 (54-275)||(111726-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (13-275)||(740-1002)
[»] scaffold0025 (1 HSPs)
scaffold0025 (25-262)||(14398-14635)
[»] chr8 (17 HSPs)
chr8 (13-262)||(8727735-8727984)
chr8 (13-275)||(23866418-23866680)
chr8 (13-265)||(44477428-44477678)
chr8 (13-265)||(44492586-44492836)
chr8 (13-301)||(27940815-27941104)
chr8 (55-275)||(17054439-17054656)
chr8 (155-264)||(18614217-18614327)
chr8 (209-301)||(14056527-14056619)
chr8 (200-264)||(23482053-23482117)
chr8 (209-297)||(25111976-25112064)
chr8 (249-301)||(30765873-30765925)
chr8 (208-264)||(39364919-39364975)
chr8 (210-264)||(29643386-29643440)
chr8 (210-265)||(24320670-24320725)
chr8 (237-300)||(21325730-21325794)
chr8 (208-264)||(21931696-21931752)
chr8 (241-300)||(21321132-21321192)
[»] scaffold0247 (1 HSPs)
scaffold0247 (13-301)||(11146-11433)
[»] chr2 (20 HSPs)
chr2 (13-264)||(19661454-19661703)
chr2 (13-264)||(6483523-6483772)
chr2 (13-264)||(6486990-6487239)
chr2 (13-275)||(26583632-26583892)
chr2 (13-262)||(23089057-23089305)
chr2 (13-262)||(23878813-23879060)
chr2 (13-264)||(23101463-23101713)
chr2 (151-265)||(5706023-5706137)
chr2 (209-301)||(6260135-6260227)
chr2 (200-264)||(23265133-23265197)
chr2 (200-264)||(23280201-23280265)
chr2 (203-264)||(21908353-21908414)
chr2 (257-301)||(19665037-19665081)
chr2 (208-264)||(24661576-24661632)
chr2 (210-265)||(10577-10632)
chr2 (210-265)||(25180929-25180984)
chr2 (97-275)||(23168288-23168470)
chr2 (97-275)||(23579545-23579727)
chr2 (193-274)||(26885166-26885246)
chr2 (181-265)||(27207719-27207803)
[»] scaffold0117 (2 HSPs)
scaffold0117 (13-275)||(1887-2148)
scaffold0117 (13-275)||(8564-8825)
[»] chr1 (16 HSPs)
chr1 (13-264)||(20437024-20437274)
chr1 (151-275)||(41111977-41112100)
chr1 (200-264)||(32651563-32651627)
chr1 (200-264)||(18712790-18712854)
chr1 (209-264)||(19663517-19663572)
chr1 (208-264)||(20805320-20805376)
chr1 (209-264)||(11158093-11158148)
chr1 (208-262)||(10811785-10811839)
chr1 (210-265)||(20851132-20851187)
chr1 (210-265)||(20857759-20857814)
chr1 (210-265)||(21706276-21706331)
chr1 (210-265)||(21710818-21710873)
chr1 (234-264)||(24476350-24476380)
chr1 (234-264)||(25091418-25091448)
chr1 (230-263)||(18271338-18271371)
chr1 (230-263)||(18275992-18276025)
[»] scaffold0553 (1 HSPs)
scaffold0553 (13-265)||(10195-10446)
[»] scaffold0544 (1 HSPs)
scaffold0544 (13-265)||(1525-1776)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-301)||(17973-18261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (25-275)||(109-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (96-301)||(30743-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (13-262)||(3295-3544)
[»] scaffold0077 (1 HSPs)
scaffold0077 (13-262)||(3624-3872)
[»] scaffold0796 (2 HSPs)
scaffold0796 (74-270)||(1727-1920)
scaffold0796 (74-270)||(5750-5943)
[»] scaffold0634 (1 HSPs)
scaffold0634 (13-105)||(3466-3558)
[»] scaffold0456 (4 HSPs)
scaffold0456 (182-269)||(904-991)
scaffold0456 (182-269)||(8049-8136)
scaffold0456 (25-121)||(806-901)
scaffold0456 (25-121)||(7951-8046)
[»] scaffold0107 (1 HSPs)
scaffold0107 (209-301)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (153-271)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (209-298)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (211-301)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (209-288)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (200-264)||(16811-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (200-264)||(116887-116951)
scaffold0004 (230-263)||(60441-60474)
[»] scaffold0461 (1 HSPs)
scaffold0461 (200-264)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (200-264)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (200-264)||(101928-101992)
[»] scaffold0249 (2 HSPs)
scaffold0249 (257-301)||(2212-2256)
scaffold0249 (191-265)||(13894-13969)
[»] scaffold0124 (2 HSPs)
scaffold0124 (209-264)||(34276-34331)
scaffold0124 (208-265)||(35438-35495)
[»] scaffold0815 (1 HSPs)
scaffold0815 (213-275)||(1453-1515)
[»] scaffold2054 (1 HSPs)
scaffold2054 (176-275)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (181-265)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (145-264)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (208-264)||(12296-12352)
[»] scaffold0261 (1 HSPs)
scaffold0261 (97-275)||(23559-23738)
[»] scaffold0139 (1 HSPs)
scaffold0139 (209-264)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (193-274)||(493019-493099)
[»] scaffold0790 (1 HSPs)
scaffold0790 (236-276)||(5480-5520)
[»] scaffold0096 (1 HSPs)
scaffold0096 (208-268)||(39503-39563)
[»] scaffold0348 (2 HSPs)
scaffold0348 (210-265)||(9336-9391)
scaffold0348 (250-298)||(14620-14668)
[»] scaffold0127 (1 HSPs)
scaffold0127 (210-265)||(10239-10294)
[»] scaffold0034 (1 HSPs)
scaffold0034 (104-262)||(73178-73337)
[»] scaffold0023 (1 HSPs)
scaffold0023 (210-265)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (210-264)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (181-265)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (208-264)||(2628-2684)
[»] scaffold0053 (1 HSPs)
scaffold0053 (210-265)||(79490-79545)
[»] scaffold0481 (1 HSPs)
scaffold0481 (218-263)||(676-721)
[»] scaffold0600 (1 HSPs)
scaffold0600 (208-264)||(732-788)
[»] scaffold0180 (1 HSPs)
scaffold0180 (215-264)||(11630-11681)
[»] scaffold0031 (2 HSPs)
scaffold0031 (208-264)||(121902-121958)
scaffold0031 (208-264)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (212-264)||(69749-69801)


Alignment Details
Target: scaffold0026 (Bit Score: 237; Significance: 1e-131; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 13 - 281
Target Start/End: Complemental strand, 12102 - 11834
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  12102 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattat 12003  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  12002 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaat 11903  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgatta 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11902 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagatta 11834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 111491 - 111741
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  111491 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 111589  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111590 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 111688  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111689 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 18873164 - 18873420
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18873164 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 18873263  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873264 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 18873363  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 269  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18873364 tttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 15167979 - 15168230
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15167979 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 15168078  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168079 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 15168178  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15168179 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 260
Target Start/End: Complemental strand, 10896042 - 10895795
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10896042 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 10895943  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaa 211  Q
    ||||||| |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  10895942 attacaagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaa 10895844  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttac 260  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10895843 ttttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 14422789 - 14423043
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| |||||||     
T  14422789 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattac 14422887  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14422888 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 14422986  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422987 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 12710095 - 12709833
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacatta 111  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||||||||| ||||||||||  |||||||||||||    
T  12710095 catcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacatta 12709997  T
Q  112 tattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtca 210  Q
    ||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12709996 tattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtca 12709897  T
Q  211 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12709896 a-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 13123166 - 13122904
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacatta 111  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||||||||| ||||||||||  |||||||||||||    
T  13123166 catcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacatta 13123068  T
Q  112 tattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtca 210  Q
    ||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13123067 tattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtca 13122968  T
Q  211 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13122967 a-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 16009382 - 16009631
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||  | |||||||||||||||||| |||||||     
T  16009382 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattac 16009480  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  16009481 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaat 16009579  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009580 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 25 - 275
Target Start/End: Original strand, 13743526 - 13743774
Alignment:
Q  25 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaa 124  Q
    ||||||||||| |||||| ||  |||||||| ||| ||||||||||||||||||| |||| ||||||||| |||| ||||||||  ||| ||||| | ||    
T  13743526 attcatcaatttatccaaccaagcataattt-caaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  125 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 224  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaatta 13743723  T
Q  225 tagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13743724 taaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 55 - 275
Target Start/End: Complemental strand, 12590851 - 12590633
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  12590851 ttcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatca 12590754  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12590753 gaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 12590655  T
Q  254 cccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||    
T  12590654 cccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 55 - 275
Target Start/End: Original strand, 13007280 - 13007497
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  13007280 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 13007376  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13007377 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 13007475  T
Q  254 cccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||    
T  13007476 cccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  68 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 167  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  168 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 68 - 262
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  68 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 167  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  168 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 21231015 - 21230923
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 21230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 20311107 - 20311026
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag--ttttgcagaatgattacacagca 288  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagca 20311026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 148619 - 148711
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatcagttccta 148711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  145 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgaga 243  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| ||||| |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  244 gatagtctcacccttacctta 264  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  229 ttatgattattgagagatagtctcacccttaccttagttttg 270  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  229 ttatgattattgagagatagtctcacccttaccttagttttg 270  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  229 ttatgattattgagagatagtctcacccttaccttagttttg 270  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 14319713 - 14319629
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||| | |||||| |  |||| | ||||||||||||||||| ||||  || ||||| ||||| || ||||||||||||||    
T  14319713 tttatcttcaagaactattcttttagattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttag 14319629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 13 - 269
Target Start/End: Original strand, 22750945 - 22751201
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22750945 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 22751044  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751045 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 22751144  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 269  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22751145 tttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 301
Target Start/End: Complemental strand, 38144786 - 38144500
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| || |||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  38144786 catcatacaaatcttcatcaattcatccaatcaatcgtaattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 38144688  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  38144687 attacaatagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaat 38144589  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144588 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 38144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 28370304 - 28370055
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  28370304 catcatacaaatcttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 28370206  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28370205 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 28370107  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370106 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 19512191 - 19512441
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  19512191 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 19512289  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
     |||||| |||||||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19512290 gttacaatagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 19512388  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19512389 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 23528478 - 23528690
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  23528478 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatca 23528575  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23528576 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 23528674  T
Q  254 cccttaccttagtttt 269  Q
    ||||||||||||||||    
T  23528675 cccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 22438803 - 22438723
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 288  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 22438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 42961566 - 42961658
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 42961658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 1856497 - 1856445
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 1856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 21674467 - 21674415
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 21674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 34830024 - 34830150
Alignment:
Q  150 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatag 248  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  |||||||| |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataa 34830122  T
Q  249 tctcacccttaccttagttttgcagaat 276  Q
    || ||||||||||||||  |||||||||    
T  34830123 tcccacccttaccttagaattgcagaat 34830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 265
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  236 tattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 14763009 - 14762758
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14763009 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattat 14762910  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762909 attacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 14762810  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14762809 tttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 15 - 262
Target Start/End: Complemental strand, 38311049 - 38310802
Alignment:
Q  15 tcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatat 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38311049 tcatacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatat 38310950  T
Q  115 tacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattt 214  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38310949 tacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatat 38310850  T
Q  215 tcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  38310849 tcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 32 - 262
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  32 aattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacat 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  132 gattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 231  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  232 tgattattgagagatagtctcacccttacct 262  Q
    |||||||||||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 25 - 262
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  25 attcatcaattcatccaatcactcataattttcaatcaatttatgat-cacagcaacaacaaagattaagttttcattctgaacattatattacaacaga 123  Q
    ||||||||||| ||||||||| ||||| |||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| | |||||||||||    
T  24192771 attcatcaatttatccaatcaatcata-ttttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  124 attaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaat 222  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  223 tatagattatgattattgagagatagtctcacccttacct 262  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 9534133 - 9534382
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||  | |||||||||||||||||| |||||||     
T  9534133 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattac 9534231  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    |||||||||||||||||||||| | |||||||| | || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9534232 attacaacagaattaacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 9534330  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534331 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 23370756 - 23370505
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  23370756 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 23370658  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  23370657 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaa 23370559  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23370558 ttttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 55499353 - 55499104
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || || ||||||||||||||||| | ||| ||||||||||||||||||||||||||||   | |||||||| |||||||| |||||| |     
T  55499353 catcatacaaaacttgatcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcac 55499255  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   || ||| |||||||||    
T  55499254 attacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcagttaggtcaa 55499157  T
Q  212 tttt-cagaaattatagattat-gattattgagagatagtctcacccttacct 262  Q
    |||| | ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  55499156 ttttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 96 - 288
Target Start/End: Complemental strand, 16801635 - 16801444
Alignment:
Q  96 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 194  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  195 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagca 288  Q
    ||| ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 24934077 - 24933828
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacatta 111  Q
    ||||||||| | |||||||||||||| ||||   ||| || || ||||||||| ||| ||  |||||||||||  ||||||| ||||||||| |||||||    
T  24934077 catcatacaaatattcatcaattcatacaatacatcaaaaatt-caatcaattaatggattgcagcaacaacatggattaagctttcattcttaacatta 24933979  T
Q  112 tattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa 211  Q
     ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||   |||  |||| |||||||||||| ||||||||||||    
T  24933978 aattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaa 24933881  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24933880 ttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 275
Target Start/End: Complemental strand, 41455305 - 41455087
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || |||||||| | |  ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  41455305 ttcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatca 41455208  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    ||||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41455207 gaatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 41455109  T
Q  254 cccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||    
T  41455108 cccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  203 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 24122273 - 24122221
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 13967814 - 13967762
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 13973289 - 13973237
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 250  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  251 tcacccttaccttag 265  Q
     ||||||||||||||    
T  10389457 ccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 250  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  251 tcacccttaccttag 265  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 250  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  251 tcacccttaccttag 265  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  230 tatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  229 ttatgattattgagagatagtctcacccttaccttag 265  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 10833359 - 10833303
Alignment:
Q  214 ttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 270  Q
    ||||||| ||||| | |||||||| |||  | |||||||||||||||||||||||||    
T  10833359 ttcagaatttatacactatgattactgaatgttagtctcacccttaccttagttttg 10833303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 983 - 1240
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  983 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattat 1081  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  1082 attacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa- 1180  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgca 272  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 49984 - 50241
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49984 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattat 50082  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  50083 attacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa- 50181  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgca 272  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 31 - 264
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  31 caattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaaca 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  131 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 230  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  231 atgattattgagagatagtctcacccttacctta 264  Q
    |||||||| |||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 29614398 - 29614136
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||      
T  29614398 catcatacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacatt-c 29614300  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattta-tcttccaaaactatgcaattaggtcaa 211  Q
    | ||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||    
T  29614299 aatacaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaa 29614200  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614199 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 13 - 301
Target Start/End: Original strand, 18800242 - 18800529
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||  || |||||||||||||||||||| | ||| |||||||||||||| |||||||| |||||| | |||||||| ||||||| ||||||| |     
T  18800242 catcataccaaacttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcac 18800340  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  18800341 attacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaa 18800439  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  18800440 ttttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttccta 18800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 23839003 - 23839253
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | ||||||||||||||||||||||||||     
T  23839003 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattac 23839101  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaa-actatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23839102 attacaacagaattaacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaa 23839200  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839201 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 10986431 - 10986170
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| || |||||| ||||||||||||||||||| |||||  | ||||||||||||||||||||||||||     
T  10986431 catcatacaaatcttcatcaattcatccaatcaatcgtaattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattac 10986333  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10986332 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 10986234  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  10986233 tttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 29 - 264
Target Start/End: Original strand, 4477678 - 4477912
Alignment:
Q  29 atcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaa 128  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| |||||||||||||||     
T  4477678 atcaaatcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  129 catgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatag 227  Q
    |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4477777 catgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatag 4477875  T
Q  228 attatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||||||||||||||    
T  4477876 attatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 130 - 275
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  130 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 229  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  230 tatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 21565462 - 21565214
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||  | |||||||| |||||||| |||| | |     
T  21565462 catcatacagaacttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcac 21565364  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||    
T  21565363 attacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaa 21565266  T
Q  212 ttttcagaaattatagattat-gattattgagagatagtctcacccttacct 262  Q
    ||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  21565265 ttttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 55 - 275
Target Start/End: Original strand, 12168211 - 12168428
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  12168211 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 12168307  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12168308 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 12168406  T
Q  254 cccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||    
T  12168407 cccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 55 - 275
Target Start/End: Original strand, 19287120 - 19287337
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  19287120 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 19287216  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19287217 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 19287315  T
Q  254 cccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||    
T  19287316 cccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 55 - 275
Target Start/End: Complemental strand, 19786076 - 19785859
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  19786076 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 19785980  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19785979 gaatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctca 19785881  T
Q  254 cccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||    
T  19785880 cccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 55 - 275
Target Start/End: Original strand, 19878304 - 19878521
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  19878304 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 19878400  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19878401 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 19878499  T
Q  254 cccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||    
T  19878500 cccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 55 - 275
Target Start/End: Original strand, 19884080 - 19884297
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  19884080 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 19884176  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19884177 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 19884275  T
Q  254 cccttaccttagttttgcagaa 275  Q
    |||| |||||||||||||||||    
T  19884276 ccctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 34640100 - 34639986
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 250  Q
    |||||| ||||||||||||||||   ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34640100 tcagaaccatcatcaaaccctaattttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtc 34640001  T
Q  251 tcacccttaccttag 265  Q
    |||||||||||||||    
T  34640000 tcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 34646774 - 34646660
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 250  Q
    |||||| ||||||||||||||||   ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34646774 tcagaaccatcatcaaaccctaattttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtc 34646675  T
Q  251 tcacccttaccttag 265  Q
    |||||||||||||||    
T  34646674 tcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 24512899 - 24512807
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttccta 24512807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 250  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  251 tcacccttaccttag 265  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 264
Target Start/End: Original strand, 9187338 - 9187550
Alignment:
Q  54 tttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||| |||| || |||||||| |||||  | ||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| ||||    
T  9187338 tttcattcaaattctgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttca 9187437  T
Q  154 gaatcatcatcaaaccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtc 250  Q
     ||||| |||||| ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| ||||||||||||||||||    
T  9187438 aaatcagcatcaa-ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtc 9187536  T
Q  251 tcacccttacctta 264  Q
    ||||||||||||||    
T  9187537 tcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 933666 - 933615
Alignment:
Q  250 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||| ||||||||| |||| || |||| ||||||||||||    
T  933666 ctcacccttaccttagatttgcagaaagattgcatagcaaaatcggttccta 933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 265
Target Start/End: Complemental strand, 11288758 - 11288668
Alignment:
Q  176 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288758 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  230 tatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  230 tatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 265
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  237 attgagagatagtctcacccttaccttag 265  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 29415591 - 29415551
Alignment:
Q  230 tatgattattgagagatagtctcacccttaccttagttttg 270  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttg 29415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 8046083 - 8045822
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8046083 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattat 8045984  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    ||||||| ||||||||||| ||  |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||     
T  8045983 attacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa- 8045885  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 275
Target Start/End: Original strand, 11847908 - 11848179
Alignment:
Q  10 catcatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacat 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11847908 catcatcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacat 11848007  T
Q  110 tatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------tttatcttccaaaactatgcaat 203  Q
    ||||||| || || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      || || || ||||||||||| |     
T  11848008 tatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccac 11848107  T
Q  204 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848108 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 151 - 265
Target Start/End: Original strand, 53483646 - 53483760
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagt 249  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagt 53483744  T
Q  250 ctcacccttaccttag 265  Q
    ||||||||||||||||    
T  53483745 ctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 15408139 - 15408231
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||| | ||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttccta 15408231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 265
Target Start/End: Original strand, 27906159 - 27906321
Alignment:
Q  104 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaa 202  Q
    |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | |    
T  27906159 gaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctcaattttatcttcaagaactattcta 27906258  T
Q  203 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    |||  | ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906259 ttatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 259  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  229 ttatgattattgagagatagtctcacccttaccttagttttg 270  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 43284059 - 43284008
Alignment:
Q  250 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||| ||||||||| |||| ||||||  ||||||||||||    
T  43284059 ctcacccttaccttagatttgcagaaagattgcacagcgaaatcggttccta 43284008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 264
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  234 attattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 264
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  234 attattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 54 - 275
Target Start/End: Original strand, 111726 - 111948
Alignment:
Q  54 tttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  111726 tttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttca 111825  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattattgagagatagtctc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  111826 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctc 111925  T
Q  253 acccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||||    
T  111926 acccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 1002 - 740
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  1002 catcatacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaacattat 904  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    ||||||| || |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  903 attacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaa 804  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  803 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  25 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaa 124  Q
    ||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||| || ||||||||||||||||| |||||| | ||||||||||||    
T  14635 attcatcaatttatccaatcaatcata-ttttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  125 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaatt 223  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  224 atagattatgattattgagagatagtctcacccttacct 262  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 8727984 - 8727735
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||     
T  8727984 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattac 8727885  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8727884 attacaacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 8727786  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8727785 ttttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 23866418 - 23866680
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacatta 111  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||| ||||||||||| ||||||||||  |||||||||||||    
T  23866418 catcatacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaacaa-gattaagtttatattctgaacatta 23866516  T
Q  112 tattacaac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtca 210  Q
    ||||||||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23866517 tattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtca 23866616  T
Q  211 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23866617 a-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 44477428 - 44477678
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  44477428 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 44477526  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44477527 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 44477625  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477626 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 44492586 - 44492836
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  44492586 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 44492684  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44492685 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 44492783  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492784 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 301
Target Start/End: Complemental strand, 27941104 - 27940815
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||  | ||||||| ||||||||||||||||||     
T  27941104 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcataacaacagtatagattaaattttcattctgaacattac 27941006  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat--ttatcttccaa-aactatgcaattaggtc 209  Q
    |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||  | ||||  |||| || ||| ||| || | | |    |    
T  27941005 attacaacagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaattcccaattcttatttttcaagaacaattctaatcaaac 27940907  T
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27940906 aattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 27940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 55 - 275
Target Start/End: Original strand, 17054439 - 17054656
Alignment:
Q  55 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttca 153  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || |||    
T  17054439 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 17054535  T
Q  154 gaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17054536 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctca 17054634  T
Q  254 cccttaccttagttttgcagaa 275  Q
    |||||||||| |||||||||||    
T  17054635 cccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  155 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 253  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||||||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  254 cccttacctta 264  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 14056619 - 14056527
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttccta 14056527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 25111976 - 25112064
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggtt 297  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||| |||| |||| |||| || ||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaagattgcacaacaaaatcggtt 25112064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 30765925 - 30765873
Alignment:
Q  249 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 30765873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 21325794 - 21325730
Alignment:
Q  237 attgagagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 300  Q
    |||||||| ||| |||||||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21325794 attgagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21325730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 21321192 - 21321132
Alignment:
Q  241 agagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 300  Q
    |||| ||||||| |||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21321192 agagttagtctcgcccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 301
Target Start/End: Original strand, 11146 - 11433
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||  |  ||||||| ||||||| ||||||| |     
T  11146 catcatacaaaacttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcac 11244  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  11245 attacaacagaattaacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaa 11343  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  11344 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 11433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 19661703 - 19661454
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| |||||||     
T  19661703 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattac 19661605  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661604 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 19661506  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  19661505 tttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 6483523 - 6483772
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  6483523 catcatacaaatcttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 6483621  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6483622 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 6483720  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483721 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 6486990 - 6487239
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  6486990 catcatacaaatcttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 6487088  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     ||||||||||||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6487089 gttacaacagaattaacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaat 6487187  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487188 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 26583632 - 26583892
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||| |||||||||||| || |  |||||   | |||| || ||||||||||||||  | |||||| |  |||||||||||||| |     
T  26583632 catcatacaaaatttcaccaattcatccaaccaattctaattacaattcaaattgtgatcacagcaacattatagattaggaattcattctgaacatcac 26583731  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaat 212  Q
     |||||||| | |||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  26583732 tttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaactatgcaattaggtcaat 26583830  T
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583831 tt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 23089305 - 23089057
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||  | |||||||| |||||||| |||| | |     
T  23089305 catcatacagaacttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcac 23089207  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||    
T  23089206 attacaacataattaacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaa 23089109  T
Q  212 ttttcagaaattatagattat-gattattgagagatagtctcacccttacct 262  Q
    ||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  23089108 ttttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 262
Target Start/End: Original strand, 23878813 - 23879060
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||| |  || ||||||||||||||||||||||| |||||  | |||||||| ||||||||||||||| |     
T  23878813 catcatacaaaacttcatcaattcatccaatcaattcta-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcac 23878911  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||  ||||| |||||||||||| | |||||||||||||||||| ||| | |||   || |||||||||||||    
T  23878912 attacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcct-caaggttaagcaattaggtcaa 23879009  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    ||||  ||||||||| || || |||| ||||||||||||||||||||||||    
T  23879010 tttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 23101713 - 23101463
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || ||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||||  | |||||||| |||||||| |||| | |     
T  23101713 catcatacagaacttcatgaattcatccaatcaattata-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcac 23101615  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   ||  ||||||||||||    
T  23101614 attacaacataattaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaattaggtcaa 23101517  T
Q  212 ttttcagaaattatagattat-gattattgagagatagtctcacccttacctta 264  Q
    ||||| ||||||| | |||||  |||| ||||||||||||||||||||||||||    
T  23101516 ttttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagt 249  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  250 ctcacccttaccttag 265  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 6260227 - 6260135
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||  ||| ||||| ||  ||||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260227 caattttcagaaaccatatattataatcgttgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 6260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  203 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 19665081 - 19665037
Alignment:
Q  257 ttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcggttccta 19665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 275
Target Start/End: Complemental strand, 23168470 - 23168288
Alignment:
Q  97 tcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt----atcttccaa 192  Q
    |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    |||||| ||    
T  23168470 tcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaatttttttatcttc-aa 23168372  T
Q  193 aactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||||| | ||||| | |||||| ||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23168371 aactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 275
Target Start/End: Complemental strand, 23579727 - 23579545
Alignment:
Q  97 tcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt----atcttccaa 192  Q
    |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    |||||| ||    
T  23579727 tcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaatttttttatcttc-aa 23579629  T
Q  193 aactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||||| | ||||| | |||||| ||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23579628 aactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  193 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 274  Q
    |||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 27207803 - 27207719
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||| | |||||| |  |||| | ||||||||||||||||| ||||  || ||||| ||||| || ||||||||||||||    
T  27207803 tttatcttcaagaactattcttttagattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttag 27207719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 2148 - 1887
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||| ||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||     
T  2148 catcgtacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaa 2049  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa- 211  Q
    ||||||| ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||     
T  2048 attacaagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaat 1951  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 8825 - 8564
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    |||| ||||||||||||||||||||| |||||||| || | |||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||     
T  8825 catcgtacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaa 8726  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa- 211  Q
    ||||||| ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||     
T  8725 attacaagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaat 8628  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 20437274 - 20437024
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | ||||||||||||||||||||||||||     
T  20437274 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattac 20437176  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20437175 attacaacataattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaa 20437077  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437076 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 41111977 - 41112100
Alignment:
Q  151 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 250  Q
    ||||||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 41112075  T
Q  251 tcacccttaccttagttttgcagaa 275  Q
    |||||||||||||||||||||||||    
T  41112076 tcacccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 264
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  234 attattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 264
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  234 attattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  230 tatgattattgagagatagtctcacccttacctt 263  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  230 tatgattattgagagatagtctcacccttacctt 263  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 10446 - 10195
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  10446 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 10348  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10347 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaa 10249  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10248 ttttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 1776 - 1525
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||     
T  1776 catcatacaaatcttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattac 1678  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaa 211  Q
    |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1677 attacaacagaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaa 1579  T
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1578 ttttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 13 - 301
Target Start/End: Original strand, 17973 - 18261
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| | ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||||||||| || |||||||||||||||| |||| |     
T  17973 catcatacaaatattcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcac 18071  T
Q  113 attacaa-cagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtca 210  Q
    ||||||| ||||||||||||||  |||||| ||||||| | ||||||||||| ||||| ||||||||||||||| |||| ||| ||| ||||||||||||    
T  18072 attacaaacagaattaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtca 18170  T
Q  211 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18171 attttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacaacacaatcggttccta 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 25 - 275
Target Start/End: Original strand, 109 - 356
Alignment:
Q  25 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaacagaa 124  Q
    ||||||||||| |||||| || ||||||||| ||| ||||||||||||||| ||| |||| ||||||||| |||| ||||||||  ||| ||||| | ||    
T  109 attcatcaatttatccaaccaatcataattt-caaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  125 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 224  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  225 tagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 96 - 301
Target Start/End: Original strand, 30743 - 30949
Alignment:
Q  96 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 194  Q
    ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| ||||||||||||||||||| ||||||||| | |||||||||    
T  30743 ttcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaa 30842  T
Q  195 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  30843 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcg 30942  T
Q  295 gttccta 301  Q
     ||||||    
T  30943 attccta 30949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 3544 - 3295
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||  | |||||||| ||||||||||||||| |     
T  3544 catcatacaaaacttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcac 3446  T
Q  113 attacaacagaattaacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtca 210  Q
    ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||||   || ||||||||||||    
T  3445 attacaacaaaattaacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatc-cccaaggttaagcaattaggtca 3348  T
Q  211 attttcagaaattatagattat-gattattgagagatagtctcacccttacct 262  Q
    |||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3347 attttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 3872 - 3624
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattat 112  Q
    ||||||||| || |||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||  | |||||||| |||||||| |||||| |     
T  3872 catcatacaaaacttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcac 3774  T
Q  113 attacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaa 211  Q
    ||||||||| |||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||    
T  3773 attacaacataattaacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaa 3676  T
Q  212 ttttcagaaattatagattat-gattattgagagatagtctcacccttacct 262  Q
    ||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3675 ttttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 74 - 270
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  74 cagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 173  Q
    |||||||| ||  ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  174 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 270  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 74 - 270
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  74 cagcaacaacaaagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 173  Q
    |||||||| ||  ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  174 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 270  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 3466 - 3558
Alignment:
Q  13 catcatacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 105  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3466 catcatacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 80; Significance: 2e-37; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 904 - 991
Alignment:
Q  182 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 269  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  182 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 269  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 806 - 901
Alignment:
Q  25 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaaca 121  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  25 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaaca 121  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 40587 - 40495
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 40495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  153 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 251  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  252 cacccttaccttagttttgc 271  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 135473 - 135562
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 298  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||| |||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttc 135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 22646 - 22556
Alignment:
Q  211 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||  ||| ||||||| ||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttccta 22556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 17643 - 17723
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 288  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 17723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  230 tatgattattgagagatagtctcacccttacctt 263  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  200 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 2256 - 2212
Alignment:
Q  257 ttaccttagttttgcagaatgattacacagcacaatcggttccta 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcggttccta 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 13969 - 13894
Alignment:
Q  191 aaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    |||||||| ||||||| | |||||| ||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13969 aaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  213 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 680 - 780
Alignment:
Q  176 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 274  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  275 a 275  Q
    |    
T  780 a 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  145 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgaga 243  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| ||||| |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  244 gatagtctcacccttacctta 264  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 275
Target Start/End: Complemental strand, 23738 - 23559
Alignment:
Q  97 tcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattta-tcttccaaaac 195  Q
    |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||  ||||||||  ||||| | |||    
T  23738 tcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctcaattttgtcttcaagaac 23639  T
Q  196 tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 275  Q
    ||| |  |||| | ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||  ||||||||    
T  23638 tattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  209 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  193 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 274  Q
    |||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 5480 - 5520
Alignment:
Q  236 tattgagagatagtctcacccttaccttagttttgcagaat 276  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaat 5520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 268  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 14668 - 14620
Alignment:
Q  250 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 298  Q
    |||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  14668 ctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttc 14620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 262
Target Start/End: Original strand, 73178 - 73337
Alignment:
Q  104 gaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaa 202  Q
    |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||  |||||||| |||||| | | |||| | |    
T  73178 gaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctcaattttatcttcaagagctatccta 73277  T
Q  203 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 262  Q
    |||| | |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73278 ttagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0453 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  181 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| ||||| ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  210 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 265  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  218 gaaattatagattatgattattgagagatagtctcacccttacctt 263  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 732 - 788
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  215 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 264  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  208 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 69749 - 69801
Alignment:
Q  212 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 264  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta 69801  T

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