View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3852_low_32 (Length: 212)
Name: NF3852_low_32
Description: NF3852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3852_low_32 |
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Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 33710185 - 33710360
Alignment:
| Q |
20 |
aaccattaaaagttagttcacaatcaaatgcaattctctcatcctgtccactttctatatcaatacacaaaatgtcctacaattcctggcttacaattgt |
119 |
Q |
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| T |
33710185 |
aaccattaaaagttagctcataatcaaatgcaattctctcatcctgtccactttctatatcaatacacaaaatgtcctacaattcctggcttacaattgt |
33710284 |
T |
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| Q |
120 |
ccagccactacttcaaaaagctaaaattgaaaaaactcaacacctccaaataatgtaaatgttgtctccacctttg |
195 |
Q |
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| T |
33710285 |
tctgccactactccaaaaagctaaaattgaaaaaactcaacacctccatataatgtaaatgttgtctccacttttg |
33710360 |
T |
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