View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3853_low_5 (Length: 251)

Name: NF3853_low_5
Description: NF3853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3853_low_5
NF3853_low_5
[»] chr2 (33 HSPs)
chr2 (14-251)||(22732646-22732883)
chr2 (14-251)||(22741838-22742075)
chr2 (14-251)||(23065709-23065946)
chr2 (14-251)||(23075159-23075396)
chr2 (51-251)||(23039482-23039682)
chr2 (14-251)||(20321314-20321551)
chr2 (28-251)||(23028348-23028571)
chr2 (28-251)||(23030095-23030318)
chr2 (14-251)||(21319875-21320112)
chr2 (14-251)||(23104599-23104836)
chr2 (28-251)||(24678821-24679044)
chr2 (14-249)||(24704354-24704589)
chr2 (14-251)||(22462353-22462590)
chr2 (14-251)||(24656530-24656767)
chr2 (70-251)||(24816767-24816948)
chr2 (14-251)||(23115931-23116168)
chr2 (166-251)||(10872181-10872266)
chr2 (166-251)||(22322369-22322454)
chr2 (14-251)||(24873625-24873862)
chr2 (159-251)||(16984571-16984663)
chr2 (166-251)||(9338913-9338998)
chr2 (166-251)||(9487547-9487632)
chr2 (159-251)||(16931838-16931930)
chr2 (166-251)||(27374600-27374685)
chr2 (166-251)||(44382597-44382682)
chr2 (159-251)||(17002331-17002423)
chr2 (169-248)||(21901874-21901953)
chr2 (166-249)||(24713367-24713450)
chr2 (166-249)||(24265703-24265786)
chr2 (75-125)||(19818281-19818331)
chr2 (169-218)||(23097045-23097094)
chr2 (70-218)||(28351242-28351390)
chr2 (52-123)||(20849048-20849119)
[»] scaffold0090 (1 HSPs)
scaffold0090 (14-251)||(30334-30571)
[»] scaffold0120 (2 HSPs)
scaffold0120 (14-251)||(11995-12232)
scaffold0120 (25-251)||(14816-15042)
[»] scaffold0490 (1 HSPs)
scaffold0490 (14-251)||(623-860)
[»] chr8 (35 HSPs)
chr8 (14-251)||(18880432-18880669)
chr8 (21-246)||(6518144-6518369)
chr8 (14-251)||(21672284-21672521)
chr8 (14-251)||(17354673-17354910)
chr8 (14-251)||(19981736-19981973)
chr8 (14-251)||(22420668-22420905)
chr8 (14-251)||(22524182-22524419)
chr8 (103-251)||(21390725-21390873)
chr8 (103-251)||(21780051-21780199)
chr8 (28-251)||(21163319-21163542)
chr8 (30-251)||(17829761-17829982)
chr8 (14-251)||(30309919-30310156)
chr8 (14-251)||(32603914-32604151)
chr8 (52-248)||(6606282-6606478)
chr8 (14-251)||(15537152-15537389)
chr8 (14-249)||(22043589-22043824)
chr8 (166-251)||(22990805-22990890)
chr8 (159-251)||(19116166-19116258)
chr8 (166-251)||(17670952-17671037)
chr8 (44-249)||(22114210-22114415)
chr8 (14-135)||(22994563-22994684)
chr8 (166-249)||(18860345-18860428)
chr8 (166-249)||(22117105-22117188)
chr8 (166-249)||(22125889-22125972)
chr8 (166-251)||(19481003-19481088)
chr8 (166-249)||(20015193-20015276)
chr8 (178-251)||(3274874-3274947)
chr8 (25-218)||(21330371-21330564)
chr8 (70-218)||(21998271-21998419)
chr8 (21-184)||(21968896-21969059)
chr8 (169-235)||(20391871-20391937)
chr8 (166-239)||(19497093-19497166)
chr8 (49-185)||(21981764-21981900)
chr8 (49-218)||(22003891-22004060)
chr8 (70-132)||(21929316-21929378)
[»] scaffold0218 (1 HSPs)
scaffold0218 (14-251)||(24061-24298)
[»] scaffold0071 (1 HSPs)
scaffold0071 (14-249)||(2959-3194)
[»] chr3 (54 HSPs)
chr3 (14-249)||(15458997-15459232)
chr3 (14-251)||(17498013-17498250)
chr3 (14-251)||(19728081-19728318)
chr3 (14-251)||(15262943-15263180)
chr3 (14-251)||(15263755-15263992)
chr3 (52-251)||(14578030-14578229)
chr3 (14-251)||(14873156-14873393)
chr3 (14-251)||(12842682-12842919)
chr3 (30-251)||(15066393-15066611)
chr3 (14-251)||(23414361-23414598)
chr3 (49-251)||(12502266-12502469)
chr3 (70-251)||(12508181-12508362)
chr3 (43-251)||(16695486-16695694)
chr3 (163-246)||(24186514-24186597)
chr3 (159-251)||(13249363-13249455)
chr3 (159-251)||(13256009-13256101)
chr3 (159-251)||(48428766-48428858)
chr3 (166-249)||(15712782-15712865)
chr3 (166-251)||(3689262-3689347)
chr3 (166-251)||(6604054-6604139)
chr3 (102-251)||(11861675-11861824)
chr3 (166-251)||(12890028-12890113)
chr3 (166-251)||(15344971-15345056)
chr3 (166-251)||(15586118-15586203)
chr3 (166-251)||(16639092-16639177)
chr3 (166-251)||(20058780-20058865)
chr3 (166-251)||(26790139-26790224)
chr3 (166-251)||(43165994-43166079)
chr3 (166-251)||(5108265-5108350)
chr3 (166-251)||(5110135-5110220)
chr3 (166-251)||(5421656-5421741)
chr3 (166-251)||(6597374-6597459)
chr3 (166-251)||(10008919-10009004)
chr3 (166-251)||(10909529-10909614)
chr3 (73-251)||(23078640-23078818)
chr3 (96-249)||(15399174-15399327)
chr3 (166-251)||(16753427-16753512)
chr3 (52-129)||(28757773-28757850)
chr3 (166-251)||(53381745-53381830)
chr3 (169-245)||(13317284-13317360)
chr3 (70-249)||(15359373-15359552)
chr3 (102-251)||(16803606-16803755)
chr3 (52-129)||(47127398-47127475)
chr3 (65-125)||(13027982-13028042)
chr3 (169-248)||(15230938-15231017)
chr3 (169-248)||(15236806-15236885)
chr3 (164-218)||(17189739-17189793)
chr3 (160-229)||(10416751-10416820)
chr3 (159-236)||(12181691-12181768)
chr3 (52-132)||(2036510-2036590)
chr3 (52-132)||(2040251-2040331)
chr3 (52-132)||(14040197-14040277)
chr3 (169-221)||(16384087-16384139)
chr3 (159-251)||(17494982-17495074)
[»] scaffold0540 (1 HSPs)
scaffold0540 (14-251)||(10215-10452)
[»] scaffold0075 (2 HSPs)
scaffold0075 (14-251)||(54807-55043)
scaffold0075 (118-248)||(48465-48594)
[»] chr5 (34 HSPs)
chr5 (14-251)||(25430055-25430292)
chr5 (14-251)||(23474829-23475066)
chr5 (14-251)||(21331503-21331740)
chr5 (14-248)||(21883415-21883649)
chr5 (49-251)||(26735340-26735542)
chr5 (70-251)||(23461539-23461720)
chr5 (70-251)||(20804232-20804413)
chr5 (102-251)||(23526686-23526835)
chr5 (96-251)||(23536811-23536966)
chr5 (159-251)||(27522038-27522130)
chr5 (159-251)||(40712412-40712504)
chr5 (169-248)||(21982161-21982240)
chr5 (166-249)||(22329556-22329639)
chr5 (166-249)||(27682069-27682152)
chr5 (157-251)||(19773592-19773686)
chr5 (166-251)||(16360134-16360219)
chr5 (174-251)||(21631073-21631150)
chr5 (166-251)||(27665172-27665257)
chr5 (166-251)||(34570126-34570211)
chr5 (166-249)||(14996408-14996491)
chr5 (166-249)||(37288165-37288248)
chr5 (166-248)||(41774478-41774560)
chr5 (166-251)||(27613988-27614073)
chr5 (14-249)||(18782751-18782986)
chr5 (166-249)||(22138302-22138385)
chr5 (166-249)||(29472742-29472825)
chr5 (166-251)||(22351551-22351636)
chr5 (169-248)||(21560694-21560773)
chr5 (52-129)||(14883543-14883620)
chr5 (160-229)||(20770777-20770846)
chr5 (160-229)||(20779552-20779621)
chr5 (160-229)||(20825092-20825161)
chr5 (160-229)||(28891602-28891671)
chr5 (173-245)||(23670255-23670327)
[»] chr6 (38 HSPs)
chr6 (14-251)||(18404413-18404650)
chr6 (22-251)||(19667013-19667242)
chr6 (14-251)||(19868185-19868422)
chr6 (14-251)||(18181864-18182101)
chr6 (14-251)||(23081990-23082227)
chr6 (43-251)||(22437436-22437644)
chr6 (65-251)||(18660486-18660672)
chr6 (65-251)||(25958281-25958467)
chr6 (70-251)||(23084358-23084539)
chr6 (14-251)||(27558293-27558530)
chr6 (21-241)||(25756094-25756314)
chr6 (14-251)||(21765379-21765616)
chr6 (21-251)||(5835715-5835945)
chr6 (25-251)||(22828877-22829103)
chr6 (173-251)||(27558605-27558683)
chr6 (166-251)||(29589071-29589156)
chr6 (166-249)||(28259829-28259912)
chr6 (166-249)||(28286004-28286087)
chr6 (166-249)||(28313196-28313279)
chr6 (166-249)||(28338578-28338661)
chr6 (166-251)||(16575454-16575539)
chr6 (166-251)||(16619841-16619926)
chr6 (166-249)||(2871434-2871517)
chr6 (14-248)||(24292261-24292496)
chr6 (166-249)||(27206188-27206271)
chr6 (166-249)||(27242957-27243040)
chr6 (52-229)||(19881985-19882162)
chr6 (70-221)||(18326454-18326605)
chr6 (159-229)||(15462925-15462995)
chr6 (166-251)||(19456590-19456675)
chr6 (166-251)||(19466735-19466820)
chr6 (174-242)||(19485948-19486016)
chr6 (166-236)||(19438584-19438654)
chr6 (160-242)||(21566614-21566696)
chr6 (160-242)||(34642208-34642290)
chr6 (160-229)||(20010124-20010193)
chr6 (160-229)||(24515047-24515116)
chr6 (166-218)||(21475133-21475185)
[»] chr4 (26 HSPs)
chr4 (14-251)||(15109-15345)
chr4 (21-251)||(16241189-16241419)
chr4 (14-251)||(16219891-16220128)
chr4 (14-251)||(15144021-15144258)
chr4 (14-251)||(14700162-14700399)
chr4 (14-251)||(14163173-14163410)
chr4 (118-248)||(8742-8871)
chr4 (14-251)||(16247748-16247985)
chr4 (14-251)||(18603891-18604128)
chr4 (14-251)||(13514053-13514290)
chr4 (46-251)||(16349846-16350051)
chr4 (14-251)||(18223546-18223782)
chr4 (166-251)||(8390112-8390197)
chr4 (166-251)||(17091376-17091461)
chr4 (166-251)||(19775020-19775105)
chr4 (169-248)||(13879815-13879894)
chr4 (166-251)||(12480300-12480385)
chr4 (166-251)||(23959447-23959532)
chr4 (166-251)||(40476740-40476825)
chr4 (166-249)||(14300206-14300289)
chr4 (166-248)||(16233219-16233301)
chr4 (169-242)||(8709388-8709461)
chr4 (166-249)||(8049850-8049933)
chr4 (159-218)||(15267513-15267572)
chr4 (70-131)||(7358090-7358151)
chr4 (73-125)||(27904213-27904265)
[»] scaffold0017 (3 HSPs)
scaffold0017 (21-251)||(194210-194440)
scaffold0017 (199-251)||(16586-16638)
scaffold0017 (199-251)||(21108-21160)
[»] scaffold0423 (1 HSPs)
scaffold0423 (14-251)||(967-1204)
[»] scaffold0358 (1 HSPs)
scaffold0358 (14-251)||(9679-9916)
[»] scaffold0357 (1 HSPs)
scaffold0357 (28-251)||(17326-17549)
[»] scaffold0282 (2 HSPs)
scaffold0282 (14-251)||(12933-13170)
scaffold0282 (21-245)||(9464-9688)
[»] scaffold0122 (1 HSPs)
scaffold0122 (14-251)||(39932-40169)
[»] scaffold0403 (2 HSPs)
scaffold0403 (14-251)||(15643-15880)
scaffold0403 (96-251)||(300-455)
[»] chr7 (24 HSPs)
chr7 (14-251)||(15145264-15145501)
chr7 (14-251)||(11526698-11526935)
chr7 (14-251)||(14043387-14043624)
chr7 (14-251)||(14353417-14353654)
chr7 (43-251)||(17702834-17703042)
chr7 (14-251)||(9592056-9592293)
chr7 (43-249)||(16725820-16726026)
chr7 (14-249)||(12691192-12691427)
chr7 (15-249)||(14958199-14958433)
chr7 (163-249)||(11549595-11549681)
chr7 (163-251)||(48810583-48810671)
chr7 (48-251)||(11984684-11984887)
chr7 (14-249)||(15157401-15157636)
chr7 (166-251)||(44787847-44787932)
chr7 (166-249)||(13689732-13689815)
chr7 (166-251)||(18586667-18586752)
chr7 (163-249)||(15628218-15628304)
chr7 (166-251)||(10874141-10874226)
chr7 (166-249)||(11233709-11233792)
chr7 (166-251)||(8711294-8711379)
chr7 (166-251)||(18181431-18181516)
chr7 (166-251)||(14336085-14336170)
chr7 (169-229)||(13005180-13005240)
chr7 (70-191)||(15114906-15115027)
[»] scaffold0621 (2 HSPs)
scaffold0621 (21-251)||(749-979)
scaffold0621 (21-251)||(5166-5396)
[»] scaffold0413 (1 HSPs)
scaffold0413 (21-251)||(4274-4504)
[»] scaffold0114 (1 HSPs)
scaffold0114 (14-244)||(16684-16914)
[»] scaffold0102 (2 HSPs)
scaffold0102 (21-251)||(49687-49917)
scaffold0102 (155-236)||(43444-43525)
[»] scaffold0084 (1 HSPs)
scaffold0084 (14-251)||(8955-9192)
[»] chr1 (28 HSPs)
chr1 (14-249)||(21044558-21044793)
chr1 (104-251)||(22402310-22402457)
chr1 (14-251)||(16379812-16380049)
chr1 (14-251)||(22117432-22117669)
chr1 (70-251)||(21752765-21752946)
chr1 (14-210)||(20246977-20247173)
chr1 (73-251)||(20080840-20081018)
chr1 (14-251)||(17041420-17041657)
chr1 (14-251)||(21177085-21177322)
chr1 (14-251)||(19110084-19110321)
chr1 (7-245)||(20922163-20922401)
chr1 (14-251)||(22435147-22435384)
chr1 (14-175)||(22459484-22459645)
chr1 (14-175)||(22469913-22470074)
chr1 (166-251)||(21834017-21834102)
chr1 (168-251)||(24784416-24784499)
chr1 (166-251)||(16347153-16347238)
chr1 (166-251)||(16353802-16353887)
chr1 (166-251)||(51330051-51330136)
chr1 (166-251)||(33387588-33387673)
chr1 (166-251)||(41350228-41350313)
chr1 (169-248)||(18273519-18273598)
chr1 (14-249)||(21842929-21843164)
chr1 (70-131)||(20298252-20298313)
chr1 (169-221)||(22401065-22401117)
chr1 (70-129)||(52989611-52989670)
chr1 (160-229)||(20853310-20853379)
chr1 (28-125)||(24784280-24784377)
[»] scaffold0411 (1 HSPs)
scaffold0411 (14-251)||(9143-9380)
[»] scaffold0010 (4 HSPs)
scaffold0010 (16-251)||(5647-5882)
scaffold0010 (16-250)||(15157-15391)
scaffold0010 (16-131)||(22040-22155)
scaffold0010 (173-229)||(180333-180389)
[»] scaffold0476 (1 HSPs)
scaffold0476 (14-251)||(11498-11735)
[»] scaffold0198 (1 HSPs)
scaffold0198 (14-251)||(31019-31256)
[»] scaffold0718 (1 HSPs)
scaffold0718 (14-251)||(6337-6574)
[»] scaffold0575 (1 HSPs)
scaffold0575 (70-251)||(10351-10532)
[»] scaffold0273 (1 HSPs)
scaffold0273 (14-251)||(763-1000)
[»] scaffold0022 (3 HSPs)
scaffold0022 (14-251)||(34107-34344)
scaffold0022 (21-251)||(42364-42594)
scaffold0022 (21-251)||(76084-76314)
[»] scaffold0261 (3 HSPs)
scaffold0261 (14-221)||(1-208)
scaffold0261 (65-218)||(11800-11953)
scaffold0261 (65-218)||(19980-20133)
[»] scaffold0447 (1 HSPs)
scaffold0447 (14-251)||(1348-1584)
[»] scaffold0383 (1 HSPs)
scaffold0383 (14-251)||(4212-4448)
[»] scaffold0293 (2 HSPs)
scaffold0293 (14-249)||(16144-16379)
scaffold0293 (7-123)||(9190-9306)
[»] scaffold0207 (1 HSPs)
scaffold0207 (27-245)||(3903-4121)
[»] scaffold0023 (3 HSPs)
scaffold0023 (14-251)||(29909-30146)
scaffold0023 (94-251)||(42868-43025)
scaffold0023 (21-86)||(41353-41418)
[»] scaffold0342 (1 HSPs)
scaffold0342 (21-251)||(13607-13837)
[»] scaffold0278 (1 HSPs)
scaffold0278 (21-251)||(4283-4513)
[»] scaffold0395 (1 HSPs)
scaffold0395 (14-251)||(15858-16095)
[»] scaffold0011 (2 HSPs)
scaffold0011 (14-251)||(22868-23105)
scaffold0011 (49-133)||(36724-36808)
[»] scaffold1274 (1 HSPs)
scaffold1274 (15-251)||(349-585)
[»] scaffold0081 (2 HSPs)
scaffold0081 (28-251)||(22336-22559)
scaffold0081 (28-251)||(37760-37983)
[»] scaffold0080 (2 HSPs)
scaffold0080 (25-251)||(55369-55595)
scaffold0080 (28-251)||(32611-32834)
[»] scaffold0042 (2 HSPs)
scaffold0042 (7-251)||(36148-36392)
scaffold0042 (14-251)||(27084-27321)
[»] scaffold0077 (1 HSPs)
scaffold0077 (14-251)||(56990-57227)
[»] scaffold0819 (1 HSPs)
scaffold0819 (15-251)||(835-1071)
[»] scaffold0270 (2 HSPs)
scaffold0270 (70-251)||(7605-7786)
scaffold0270 (70-251)||(14735-14916)
[»] scaffold0130 (1 HSPs)
scaffold0130 (14-251)||(7114-7351)
[»] scaffold0012 (1 HSPs)
scaffold0012 (70-251)||(215811-215992)
[»] scaffold0040 (2 HSPs)
scaffold0040 (7-251)||(18577-18821)
scaffold0040 (71-251)||(110299-110479)
[»] scaffold0297 (2 HSPs)
scaffold0297 (14-251)||(6992-7229)
scaffold0297 (14-251)||(11759-11996)
[»] scaffold0064 (1 HSPs)
scaffold0064 (14-251)||(65865-66102)
[»] scaffold0029 (3 HSPs)
scaffold0029 (14-251)||(8946-9183)
scaffold0029 (166-251)||(107264-107349)
scaffold0029 (173-229)||(93388-93444)
[»] scaffold0546 (1 HSPs)
scaffold0546 (43-251)||(611-819)
[»] scaffold0109 (2 HSPs)
scaffold0109 (43-251)||(12488-12696)
scaffold0109 (96-251)||(41884-42039)
[»] scaffold0501 (1 HSPs)
scaffold0501 (14-194)||(631-811)
[»] scaffold0410 (1 HSPs)
scaffold0410 (14-249)||(875-1110)
[»] scaffold2059 (1 HSPs)
scaffold2059 (97-251)||(187-341)
[»] scaffold0289 (1 HSPs)
scaffold0289 (65-251)||(520-706)
[»] scaffold0259 (1 HSPs)
scaffold0259 (43-249)||(8989-9194)
[»] scaffold0046 (1 HSPs)
scaffold0046 (7-245)||(667-905)
[»] scaffold0451 (1 HSPs)
scaffold0451 (14-251)||(13365-13602)
[»] scaffold0001 (2 HSPs)
scaffold0001 (70-251)||(442384-442565)
scaffold0001 (72-218)||(167577-167723)
[»] scaffold0074 (1 HSPs)
scaffold0074 (70-248)||(6846-7024)
[»] scaffold0671 (1 HSPs)
scaffold0671 (65-250)||(3682-3867)
[»] scaffold0280 (1 HSPs)
scaffold0280 (43-251)||(23590-23798)
[»] scaffold0285 (1 HSPs)
scaffold0285 (29-251)||(5730-5952)
[»] scaffold0003 (2 HSPs)
scaffold0003 (14-248)||(425034-425268)
scaffold0003 (14-248)||(138421-138655)
[»] scaffold0331 (1 HSPs)
scaffold0331 (70-251)||(14394-14575)
[»] scaffold0028 (3 HSPs)
scaffold0028 (14-251)||(55733-55970)
scaffold0028 (14-249)||(21711-21946)
scaffold0028 (169-229)||(12203-12263)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-251)||(8685-8922)
[»] scaffold0008 (2 HSPs)
scaffold0008 (14-251)||(581-818)
scaffold0008 (159-251)||(139090-139182)
[»] scaffold0019 (1 HSPs)
scaffold0019 (14-249)||(171853-172088)
[»] scaffold0007 (2 HSPs)
scaffold0007 (7-218)||(162336-162547)
scaffold0007 (96-251)||(49394-49549)
[»] scaffold0305 (2 HSPs)
scaffold0305 (109-251)||(3596-3738)
scaffold0305 (14-80)||(3758-3824)
[»] scaffold0181 (1 HSPs)
scaffold0181 (97-251)||(28349-28503)
[»] scaffold0412 (1 HSPs)
scaffold0412 (14-251)||(14923-15160)
[»] scaffold0177 (2 HSPs)
scaffold0177 (14-251)||(14376-14613)
scaffold0177 (166-251)||(10843-10928)
[»] scaffold0079 (1 HSPs)
scaffold0079 (46-251)||(37230-37435)
[»] scaffold0044 (2 HSPs)
scaffold0044 (14-251)||(17892-18129)
scaffold0044 (166-245)||(4159-4238)
[»] scaffold1459 (1 HSPs)
scaffold1459 (45-251)||(458-664)
[»] scaffold0429 (1 HSPs)
scaffold0429 (65-251)||(808-994)
[»] scaffold0789 (1 HSPs)
scaffold0789 (14-251)||(656-893)
[»] scaffold1220 (1 HSPs)
scaffold1220 (49-251)||(468-670)
[»] scaffold0006 (2 HSPs)
scaffold0006 (181-251)||(104958-105028)
scaffold0006 (14-140)||(105038-105164)
[»] scaffold1600 (1 HSPs)
scaffold1600 (163-251)||(789-877)
[»] scaffold0529 (1 HSPs)
scaffold0529 (171-251)||(5820-5900)
[»] scaffold0393 (1 HSPs)
scaffold0393 (43-251)||(163-371)
[»] scaffold0034 (2 HSPs)
scaffold0034 (70-251)||(121559-121748)
scaffold0034 (73-131)||(71224-71282)
[»] scaffold0161 (1 HSPs)
scaffold0161 (65-251)||(36515-36701)
[»] scaffold0009 (1 HSPs)
scaffold0009 (166-251)||(229339-229424)
[»] scaffold0609 (1 HSPs)
scaffold0609 (169-248)||(8292-8371)
[»] scaffold0505 (1 HSPs)
scaffold0505 (163-242)||(2492-2571)
[»] scaffold0431 (1 HSPs)
scaffold0431 (14-249)||(11098-11333)
[»] scaffold0055 (1 HSPs)
scaffold0055 (166-248)||(22979-23061)
[»] scaffold0052 (1 HSPs)
scaffold0052 (166-248)||(7968-8050)
[»] scaffold1881 (1 HSPs)
scaffold1881 (200-251)||(1-52)
[»] scaffold0420 (1 HSPs)
scaffold0420 (14-61)||(7487-7534)
[»] scaffold0230 (1 HSPs)
scaffold0230 (70-221)||(17750-17901)
[»] scaffold0656 (1 HSPs)
scaffold0656 (14-176)||(114-276)
[»] scaffold0169 (1 HSPs)
scaffold0169 (14-56)||(35550-35592)
[»] scaffold0100 (1 HSPs)
scaffold0100 (163-229)||(11395-11461)
[»] scaffold0523 (2 HSPs)
scaffold0523 (71-132)||(6288-6349)
scaffold0523 (70-131)||(11134-11195)
[»] scaffold0058 (2 HSPs)
scaffold0058 (52-229)||(16175-16352)
scaffold0058 (160-251)||(22854-22945)
[»] scaffold0443 (1 HSPs)
scaffold0443 (52-123)||(12264-12335)
[»] scaffold0148 (1 HSPs)
scaffold0148 (70-125)||(6929-6984)
[»] scaffold0020 (1 HSPs)
scaffold0020 (166-236)||(98070-98140)
[»] scaffold0243 (1 HSPs)
scaffold0243 (214-251)||(23480-23517)
[»] scaffold0056 (1 HSPs)
scaffold0056 (70-131)||(274-335)
[»] scaffold0324 (1 HSPs)
scaffold0324 (16-60)||(2635-2679)


Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 22732646 - 22732883
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22732646 agacgtggctccaagagatggagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaatacatatgctagttgaggaggctga 22732745  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22732746 tgattggtgggtgagtcttctaactaccttagagcaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 22732845  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| | |||| ||||||||||||||    
T  22732846 gatgttcgtgggaagaaaaagatagagttccttgagct 22732883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 22741838 - 22742075
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||||| |||||||||||||| ||  |  ||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  22741838 agacgtggcttaaagagattgagagagttttccgtgtgatgcaatgcaccgaagtccagaaggtgcgttttggaacgcatatgctagctgaggaggctga 22741937  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| ||| || ||||| |||  ||| ||||||||||||||||||| ||||||||  | ||||||||||||||||||    
T  22741938 tgattggtggattagtcttctacctactttaaagcaagacggtgccgtgattacttgggctgtgtttagaagggagtttgtgaacagatactttccggaa 22742037  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| || |||||||||||    
T  22742038 gatgttcgcgggaagaaagagattgaattccttgagct 22742075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 23065946 - 23065709
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||||||  | ||||  |||||| ||||||| || || ||||||| ||| ||| ||||    
T  23065946 agacgtggctcaaagagattgagagagtgttcagtgtaatgcagtgttcagaggtcccaaaggtgtgttttggtacgcacatgctagctgaagagactga 23065847  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||| |||||||||||||||| |||| || ||| ||||  ||| ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23065846 tgatttgtgggtgagtcttctacctactttggagcaagatggtgctgttgtgacttgggctgtatttaggagggagttcctaaacagatactttccggaa 23065747  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| | |||| ||||||||||||||    
T  23065746 gatgttcgtgggaagaaaaagattgagttccttgagct 23065709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 23075396 - 23075159
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||||||  | ||||  |||||| ||||||| || || ||||||| ||| ||| ||||    
T  23075396 agacgtggctcaaagagattgagagagtgttcagtgtaatgcagtgttcagaggtcccaaaggtgtgttttggtacgcacatgctagctgaagagactga 23075297  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||| |||||||||||||||| |||| || ||| ||||  ||| ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23075296 tgatttgtgggtgagtcttctacctactttggagcaagatggtgctgttgtgacttgggctgtatttaggagggagttcctaaacagatactttccggaa 23075197  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| | |||| ||||||||||||||    
T  23075196 gatgttcgtgggaagaaaaagattgagttccttgagct 23075159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 251
Target Start/End: Original strand, 23039482 - 23039682
Alignment:
Q  51 gatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaa 150  Q
    ||||||||||||  |||| || ||||||| |||||| || || ||||||| |||||| ||||||||||| ||||||||||||||| ||||||| ||| ||    
T  23039482 gatgcagtgttcagaagttcataaggtgcattttggtacgcacatgctagctgaggaagctgatgattgctgggtgagtcttctacctaccttggagcaa 23039581  T
Q  151 gactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagc 250  Q
    ||  ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  23039582 gatggtgttgttgtgacttgggctgtgtttaggagggagttcctaaacaaatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagc 23039681  T
Q  251 t 251  Q
    |    
T  23039682 t 23039682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 20321551 - 20321314
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||| ||||| |||||||| ||||| ||  || |||| ||||||||||| ||||| ||||||  | | | |||||| |||||    
T  20321551 agacgtggcttaaagagattgaaagagttttccgtgttatgcaatgcactgaagttcagaaggtgcgatttggtacacatcagttggctgaggaagctga 20321452  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||||| ||||| ||||| ||||  ||| ||| || ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20321451 tgattggtgggttagtcttctacctaccctagagcaagatggtgctgttgtgacttgggctgtgtttaggagggagttcctaagcagatactttccggaa 20321352  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||  |||||| ||||||||| |||||||||||    
T  20321351 gatgttcgcaggaagaaagagatcgaattccttgagct 20321314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 28 - 251
Target Start/End: Original strand, 23028348 - 23028571
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtga 127  Q
    ||||| |||||||| |||||||||||||||||  || |||  ||||||||||| ||||| ||||||  ||| | |||||| ||||||||||||||||| |    
T  23028348 gagatcgagagagttttccgtgtgatgcagtgcactgaagatcagaaggtgcgatttggtacacattagctggctgaggaagctgatgattggtgggtta 23028447  T
Q  128 gtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaa 227  Q
    |||||||| ||||| ||||| ||||  ||| ||  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||    
T  23028448 gtcttctacctaccctagagcaagatggtgctgctgtgacttgggctgtgtttaggagggagttcctaagcagatactttccggaagatgtttgcgggaa 23028547  T
Q  228 gagagagatcgagttccttgagct 251  Q
    || |||||| |||||||| |||||    
T  23028548 gaaagagattgagttcctcgagct 23028571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 28 - 251
Target Start/End: Complemental strand, 23030318 - 23030095
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtga 127  Q
    ||||| || ||||| |||||||| || |||||  || |||| ||||||||||| ||||| ||||||  | | | |||||| ||||||||||||||| | |    
T  23030318 gagatagaaagagttttccgtgttatacagtgcactgaagttcagaaggtgcgatttggtacacatcagttggctgaggaagctgatgattggtggatta 23030219  T
Q  128 gtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaa 227  Q
    |||||||| |||| |||||| ||||| ||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  23030218 gtcttctacctactttagagcaagacggtgctgtggttacttgggttgtgtttagaagggagttcctgaacagatactttccggaagatgttcgcgggaa 23030119  T
Q  228 gagagagatcgagttccttgagct 251  Q
    || |||||| ||||||||||||||    
T  23030118 gaaagagatggagttccttgagct 23030095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 21319875 - 21320112
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| ||||| || ||  | |||||||||||||||||  |  | || ||||||||||| ||||| ||| ||  ||| | |||||| | |||    
T  21319875 agacgtggctcaaggagatcgaaaggattttccgtgtgatgcagtgcaccgaggttcagaaggtgcgatttggtacagatcagctggctgaggaagttga 21319974  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||||| ||||| ||||| ||||  | | ||| || |||||||||||||||||||| |||||||||| |||||||||| |||||    
T  21319975 tgattggtgggttagtcttctacctaccctagagcaagatggagctgttgtgacttgggctgtgtttaggagagagttcctaagcagatacttttcggaa 21320074  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  21320075 gatgttcgcgggaagaaagagatcgagttccttgagct 21320112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 23104599 - 23104836
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| |||||||  || ||||| |||||||| ||||||||   | |||| ||||||||||| ||||| ||||||  | | | |||||| |||||    
T  23104599 agacgtggcttaaagagacagaaagagttttccgtgttatgcagtgcattgaagttcagaaggtgcgatttggtacacatcagttggctgaggaagctga 23104698  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||| ||||| ||||||||| ||||| ||||| ||||  ||  ||  || |||||||||||||||||||||||||||||||  |||||||||||||||    
T  23104699 tgattgatgggttagtcttctacctaccctagagcaagatggtactgctgtgacttgggctgtgtttaggagggagttcctaagtagatactttccggaa 23104798  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||||||||| |||||||||||    
T  23104799 gatgttcgcgggaagaaagagatcgaattccttgagct 23104836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 251
Target Start/End: Complemental strand, 24679044 - 24678821
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtga 127  Q
    ||||| |||||||| |||||||| ||||| ||   | |||  ||||||||||| ||||| ||||||  ||| |  ||||| ||||||||||||||||| |    
T  24679044 gagatcgagagagttttccgtgttatgcaatgcattgaagatcagaaggtgcgatttggtacacatcagcttgccgaggaagctgatgattggtgggtta 24678945  T
Q  128 gtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaa 227  Q
    |||||||| ||||| ||||| ||||  ||| ||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  24678944 gtcttctacctaccctagagcaagatggtgctgttgtgacttgggctgtgtttaggagggagttcctaagcagatactttccggaagatgttcgcgggaa 24678845  T
Q  228 gagagagatcgagttccttgagct 251  Q
    ||  | ||| || |||||||||||    
T  24678844 gaaggggattgaattccttgagct 24678821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 24704354 - 24704589
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||  | ||||||||||||||||   || | || ||||| ||||||||||| || |||  ||||| |||||| |||||    
T  24704354 agacgtggcttaaggagatcgagaggattttccgtgtgatgcagtaaactgaggttcagaaagtgcgttttggtacgcatcagctagctgaggaagctga 24704453  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| || |||||| ||| | ||||| ||||  ||| ||  || |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  24704454 tgattggtgggttagccttctacctaacctagagcaagatggtgctgctgtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 24704553  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| ||||||| ||| |||||||||||||||    
T  24704554 gatgttcgcgggaagaaagaaatcgagttccttgag 24704589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 22462353 - 22462590
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||| ||  | |||||||||||||||||  || | |||||||| || || ||||| || |||  ||||| |||||| |||||    
T  22462353 agacgtggcttaaagagattgaaaggattttccgtgtgatgcagtgcactgaggtccagaaagtacgatttggtactcatcagctagctgaggaagctga 22462452  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||| ||||  | | ||   | |||||| ||||||| ||||| |||||||| |  |||||||||| ||||    
T  22462453 tgattggtgggttagtctgctacctaaccttgagcaagatggagctgctatgacttggtctgtgttcaggagagagttcctgagaagatactttctggaa 22462552  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||||||||||||||||||    
T  22462553 gatgttcgcgggaagaaggagatcgagttccttgagct 22462590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 24656530 - 24656767
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | |||||||||||||||||  || | || |||||  |||| || || || |||  ||||| |||||| ||||     
T  24656530 agacgtggcttaaggagattgagaggattttccgtgtgatgcagtgcactgaggttcagaaattgcgattcggtacgcatcagctagctgaggaagctgt 24656629  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| || |||||  ||| | ||||| ||||| ||| ||  || | |||||| ||||| ||||| |||||||| |  |||||||||||||||    
T  24656630 tgattggtgggttagccttctgcctaacctagagcaagacggtgctgctgtgagttgggcagtgttcaggagagagttcctgagaagatactttccggaa 24656729  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||||||||| ||||||||    
T  24656730 gatgttcgcgggaagaaagagatcgagttacttgagct 24656767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 251
Target Start/End: Original strand, 24816767 - 24816948
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| ||||| || || ||||||| |||||| |||||||| |||||||||||| ||||| ||| | ||||| | |   |||  || |||||||    
T  24816767 cagaaggtgcgctttggtacgcacatgctagctgaggaagctgatgactggtgggtgagtattctacctatcctagagcacggaggtggagttgttactt 24816866  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||  |||||||| || |||||| || ||||||||||||||||||||||||| || |||| |||||| ||||| ||||||||    
T  24816867 gggtagtgtttagaagagagttcttagacagatactttccggaagatgttcgcggaaagaaagagattgagtttcttgagct 24816948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 23115931 - 23116168
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||| ||||||||  || |||  ||||| ||||| ||||| || |||  ||||| |||||| |||||    
T  23115931 agacgtggcttaaagagattgagaggatcttccgtgttatgcagtgcactgaagatcagaaagtgcggtttggtactcatcagctagctgaggaagctga 23116030  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| |||||||| || |||||| ||||| | | | ||||  | | |||  | |||||||||||||| ||||| |||||||| |  |||||| || |||||    
T  23116031 tgactggtgggttagccttctacctacccttgggcaagaaggagctgttttgacttgggctgtgttcaggagagagttcctgagaagatacattacggaa 23116130  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  |||||||| |||||||||||    
T  23116131 gatgttcgcgggaagaaggagatcgaattccttgagct 23116168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 10872266 - 10872181
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || |||||||||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  10872266 acttgggctgttttcaggagggagttcctgagaagatactttccggaagatgttcgagggaagaaagagatcgaattccttgagct 10872181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 22322369 - 22322454
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  22322369 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgtgggaagaaagagatcgaattccttgagct 22322454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 24873625 - 24873862
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||| ||||||||  || |||  ||||| ||||| ||||| || |||  ||||| |||||| |||||    
T  24873625 agacgtggcttaaagagattgagaggattttccgtgttatgcagtgcactgaagatcagaaagtgcggtttggtactcatcagctagctgaggaagctga 24873724  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| ||||||||  | |||||| ||||| | | | ||||  | | ||| || || ||||||||||| ||||| |||||||| |  |||||||||||||||    
T  24873725 tgactggtgggttggccttctacctacccttgggcaagaaggagctgttgtgacctgggctgtgttcaggagagagttcctgagaagatactttccggaa 24873824  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||| || || ||||||||    
T  24873825 gatgttcgcgggaagaaggagattgaattgcttgagct 24873862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 16984663 - 16984571
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  16984663 tgtggtgacttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 16984571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 9338998 - 9338913
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  9338998 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 9338913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 9487632 - 9487547
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  9487632 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 9487547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 16931930 - 16931838
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||    
T  16931930 tgtggtgacttgggctgttttcaggagagagttcctgagaagatactttncggaagatgttcgcgggaagaaagagatcgaattccttgagct 16931838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 27374685 - 27374600
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||| | |||||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  27374685 acttgggctatttttaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 27374600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 44382597 - 44382682
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  44382597 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgagct 44382682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 17002423 - 17002331
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||    
T  17002423 tgtggtgacttgggctgttttcaggagagagttcctgagaagatacttttcggaagatgttcgcgggaagaaagagatcgaattccttgagct 17002331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 21901953 - 21901874
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||||||||||||||||||||| ||||  |||||||| |||||||| ||||| |||| |||||||||||| |||||    
T  21901953 tgggctgtgtttaggagggagttcctgaacaagtactttccagaagatgtccgtggaaagaaagagatcgagtttcttga 21901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 24713450 - 24713367
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  24713450 acttgggctgttttcaggagagagttcctcagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 24713367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 24265786 - 24265703
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || |||||||||||| | |  |||||||||| |||||||||||| |||||||  ||||||||||||||||||    
T  24265786 acttgggctgttttcaggagggagttcttgagaagatactttctggaagatgttcgcgggaagaaggagatcgagttccttgag 24265703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 19818331 - 19818281
Alignment:
Q  75 ggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggt 125  Q
    |||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  19818331 ggtgcgttttggcacgcatatgctagctgaggaggctgatgattggtgggt 19818281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 23097045 - 23097094
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    ||||||||||| |||||||| ||||| || ||||||||||||||||||||    
T  23097045 tgggctgtgttcaggagggaattcctgaatagatactttccggaagatgt 23097094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 218
Target Start/End: Complemental strand, 28351390 - 28351242
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| ||||| || |||||| ||| ||| || || ||||| |||||||||||||||||| | | | ||||| ||||  ||| ||| || || |    
T  28351390 cagaaggtgcggtttggcacgcatatgttagctgaagaagcagatgactggtgggtgagtcttctacccatcctagagcaagatggtgctgttgtaacct 28351291  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    ||| |||||| ||||| ||||| ||  |||| || |||||||| |||||    
T  28351290 gggttgtgttcaggagagagtttctggacaggtattttccggaggatgt 28351242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 20849119 - 20849048
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgg 123  Q
    |||||||||||| | || || |||||||| ||||| || || ||||||| ||| ||||||||||||||||||    
T  20849119 atgcagtgttctgaggttcaaaaggtgcggtttgggacgcacatgctagctgaagaggctgatgattggtgg 20849048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 30334 - 30571
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||  | || |  |||||||||||||| || || ||||||| |||||| |||||    
T  30334 agacgtggctcaaagagattgagagagtgttccgcgtgatgcagtgttcagaggttcgaaaggtgcgttttggtacgcacatgctagctgaggaagctga 30433  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30434 tgattggtgggtgagtcttctacctaccttagagcaagacggtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 30533  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  30534 gatgttcgcgggaagaaagagatcgagttccttgagct 30571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 158; Significance: 4e-84; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 12232 - 11995
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| || || ||||||| ||| || |||||    
T  12232 agacgtggctcaaagagattgagagagtgttccgtgtaatgcagtgttcagaagtccagaaggtgcgttttggtacgcacatgctagctgaagaagctga 12133  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| | || |||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12132 tgattggtgggtgagtcttctacccactttagagcaagacggtgttgtggttacttgggctgtgcttaggagagagttcctaaacagatactttccggaa 12033  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  12032 gatgttcgcgggaagaaagagattgagttccttgagct 11995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 25 - 251
Target Start/End: Complemental strand, 15042 - 14816
Alignment:
Q  25 aaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtggg 124  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||    
T  15042 aaagtgattgagagagtgttccgtgtaatgcagtgttctgaagtccagaaggtgcgttttggaacgcatatgctacctgaggaagctgatgattggtggg 14943  T
Q  125 tgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgg 224  Q
    |||| |||||| ||||  ||||| ||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||    
T  14942 tgagccttctacctactctagagcaagatggtgttgtggttacctgggctgtgtttaggagagagttcctaaacagatacattccggaagatgttcgcgg 14843  T
Q  225 gaagagagagatcgagttccttgagct 251  Q
     |||| ||||||  |||||||||||||    
T  14842 aaagaaagagattaagttccttgagct 14816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 860 - 623
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  860 agacgtggctcaaagagattgagagagtattccgcgtgatgcaatgttctgaagtccagaaggtgcgttttggaacgcatatgctagctgaggaagctga 761  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||||||||||  ||||  ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  760 tgattggtggattagtcttctacctaccttagaacaagatggtgctgtggttacctgggctgtgtttaggagagagttcctaaacagatactttccggaa 661  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  660 gatgttcgcgggaagaaagagattgagttccttgagct 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 9e-82; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 18880432 - 18880669
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||| || || ||||||||||||||||| || || ||||||| |||||| |||||    
T  18880432 agacgtggctcaaagagattgagagagtgttccacgtgatgcagtgttcaaaggttcagaaggtgcgttttggtacgcacatgctagctgaggaagctga 18880531  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||    
T  18880532 tgattggtgggtgagtcttctacctaccttagagcaaaacggtgatgtggttacttgggctgtgtttaggagagagttcttaaacagatacttttcggaa 18880631  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  18880632 gatgttcgtgggaagaaagagatcgagttccatgagct 18880669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 246
Target Start/End: Complemental strand, 6518369 - 6518144
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||| ||||| |||||||||||||||||||||||||||||  | || ||||||||| ||||||| || || ||||||| ||| || |||||||| |||    
T  6518369 gctcaaggagatagagagagtgttccgtgtgatgcagtgttcagaggttcagaaggtgtgttttggtacgcacatgctagctgaagaagctgatgactgg 6518270  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||||||||||| |||||| ||||| |||||||||  ||||||||||    
T  6518269 tgggtgagtcttctacctaccctagagcaagacggtgttgtggttacttgagctgtgtttaggagagagttcttaaaccgatactttctagaagatgttc 6518170  T
Q  221 gtgggaagagagagatcgagttcctt 246  Q
    | ||||||| ||||||||||||||||    
T  6518169 gagggaagaaagagatcgagttcctt 6518144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 21672521 - 21672284
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||| || |||  |||||||||||||||||||| ||||||  |   || || |||||    
T  21672521 agacgtggctcaaagagattgagagagtgttccgtgtgaagcagtgtactgaaggtcagaaggtgcgttttggaacgcatatgtcaaccgaagaagctga 21672422  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| |||||| | || |||||  ||| ||||||| ||||  ||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21672421 tgactggtggattagccttctgcctaacttagagcaagatggtgctgcggttacttgggctctgtttaggagggagttcctaaacagatactttccggaa 21672322  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||  |||||| |||||| |||||||| |||||    
T  21672321 gatgttcgcaggaagaaagagattgagttcctagagct 21672284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 17354673 - 17354910
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| || ||||| |||||||| ||||| ||| |  |||| ||||||||||||||||| ||||||  ||||| |||||| |||||    
T  17354673 agacgtggcttaaggagatcgaaagagttttccgtgttatgcaatgtaccgaagttcagaaggtgcgttttggtacacatcagctagctgaggaagctga 17354772  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||||| ||||| ||||| ||||  ||| ||  || |||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  17354773 tgattggtgggttagtcttctacctaccctagagcaagatggtgctgctgtgacttgggcagtgtttaggagggatttcctaagcagatactttccggaa 17354872  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  17354873 gatgttcgcgggaagaaagagattgagttccttgagct 17354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 19981973 - 19981736
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||||| |||||||||||||||||  |  |||| ||||||||||||||||| || |||  ||| | |||||| |||||    
T  19981973 agacgtggcttaaggagattgagagagttttccgtgtgatgcagtgcaccgaagttcagaaggtgcgttttggtactcatcagctggctgaggaagctga 19981874  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| || ||| ||||| ||  | | || ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19981873 tgattggtggattagtcttctacctactttcgagcaagacggtactattgtgacttgggctgtgtttaggagggagttcctaaacagatacattctggaa 19981774  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  19981773 gatgttcgcgggaagaaagagatagagttccttgagct 19981736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 22420668 - 22420905
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||||||||| || |   ||||| || | || ||||||||||||||||| || || ||||||| |||||| |||||    
T  22420668 agacgtggctcaaagagattgagagagtgttccgggttaatgagtgtactgaggttcagaaggtgcgttttggtacgcacatgctagctgaggaagctga 22420767  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | |  |||||| ||  | ||||| ||||  ||| ||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  22420768 tgattggtggattacccttctacctgtcctagagtaagatggtgctgttgttacttgggctgtgtttatgagagagttcctagacagatactttccggaa 22420867  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| | ||||| |||||| ||||||||||||||    
T  22420868 gatgttcgcgagaagaaagagattgagttccttgagct 22420905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 22524419 - 22524182
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||| ||||||||||| || || ||| | ||| || | || ||||| ||||||||||| || || ||||||| |||||| |||||    
T  22524419 agacgtggctcaaagagatagagagagtgtttcgggttatgtaatgtactgaggttcagaaagtgcgttttggtacgcacatgctagctgaggaagctga 22524320  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||| |||||||||||| || ||||  ||||| ||||  | | ||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||    
T  22524319 tgattgatgggtgagtcttttacctactctagagcaagatggcgctgttgttacttgggctgtgtttaggagagagttcctagacagatactttccgaaa 22524220  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||||||  |||||||||||||    
T  22524219 gatgttcgcgggaagaaagagattaagttccttgagct 22524182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 103 - 251
Target Start/End: Original strand, 21390725 - 21390873
Alignment:
Q  103 gaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagat 202  Q
    ||||| ||||||||||||||||| ||||||||| ||||| ||||| ||||| ||| ||| || || |||||||||||||||||||| |||||||||||||    
T  21390725 gaggaagctgatgattggtgggttagtcttctacctaccctagagcaagacggtgctgttgtgacatgggctgtgtttaggagggatttcctaaacagat 21390824  T
Q  203 actttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  21390825 actttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 21390873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 103 - 251
Target Start/End: Original strand, 21780051 - 21780199
Alignment:
Q  103 gaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagat 202  Q
    ||||| ||||||||||||||||| ||||||||| ||||| ||||| ||||| ||| ||| || || |||||||||||||||||||| |||||||||||||    
T  21780051 gaggaagctgatgattggtgggttagtcttctacctaccctagagcaagacggtgctgttgtgacatgggctgtgtttaggagggatttcctaaacagat 21780150  T
Q  203 actttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  21780151 actttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 21780199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 28 - 251
Target Start/End: Original strand, 21163319 - 21163542
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtga 127  Q
    ||||| || ||||| |||||||| ||||| ||  || |||| ||||||||||| ||||| ||||||  ||| | |||||| ||||||||| ||||||| |    
T  21163319 gagatcgacagagttttccgtgttatgcaatgcactgaagttcagaaggtgcgatttggtacacatcagctggctgaggaagctgatgatgggtgggtta 21163418  T
Q  128 gtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaa 227  Q
    |||||||| ||||| ||||| ||||  ||| ||   | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  21163419 gtcttctacctaccctagagcaagatggtgctgctatgacttgggctgtgtttaggagggagttcctaagcagatactttccggaagatgttcgcgggaa 21163518  T
Q  228 gagagagatcgagttccttgagct 251  Q
    ||  ||||| ||||||||||||||    
T  21163519 gaaggagattgagttccttgagct 21163542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 17829761 - 17829982
Alignment:
Q  30 gattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagt 129  Q
    |||||||||  | |||||| ||||||||||  || | ||||||||||| || ||||| || |||  ||||| ||| || ||||||||||||||||| |||    
T  17829761 gattgagaggatattccgtctgatgcagtgcactgaggtccagaaggtacgatttggtactcatcagctagctgatgaagctgatgattggtgggttagt 17829860  T
Q  130 cttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    |||| | ||||| | ||| ||||  | | |||||| ||||||| |||||| ||||| |||||| | |  ||||||||||||||||||||| | |||||||    
T  17829861 cttcaacctacccttgagcaagaaggagctgtggtgacttgggttgtgttcaggagagagttcttgagaagatactttccggaagatgtttgcgggaaga 17829960  T
Q  230 gagagatcgagttccttgagct 251  Q
      |||||||| |||||||||||    
T  17829961 aggagatcgaattccttgagct 17829982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 30309919 - 30310156
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | || ||||||||||||||  |  | ||||| || || || ||||| || |||  ||||| |||||| |||||    
T  30309919 agacgtggctaaaagagattgagaggatttttcgtgtgatgcagtgcaccgaggtccaaaaagtacgatttggtactcatcagctagctgaggaagctga 30310018  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||  ||||  | | ||| || |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  30310019 tgattggtgggttagtctgctacctaaccttgaacaagatggagctgttgtaacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 30310118  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||| ||||||||||||||    
T  30310119 gatgttcgcgggaagaaggagattgagttccttgagct 30310156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 32604151 - 32603914
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | |||||||||||||||||  || | ||||||||||| || ||||| || |||  ||||| |||||| |||||    
T  32604151 agacgtggcttaaggagattgagaggatattccgtgtgatgcagtgcactgaggtccagaaggtacgatttggtactcatcagctagctgaggaagctga 32604052  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||||| |||| ||||||| | ||||  | ||| || |  | | |||||| |||||||||||||| ||||| |||||| | |  |||||||||||||||    
T  32604051 tgattggggggttagtcttcaacctactcttgagcaataaggagctgtggtgacttgggctgtgttcaggagagagttcatgagaagatactttccggaa 32603952  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||| || |||||||  |||||||| || ||||||||    
T  32603951 gatgtccgcgggaagaaggagatcgaatttcttgagct 32603914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 248
Target Start/End: Original strand, 6606282 - 6606478
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaag 151  Q
    |||||||||||  | || ||||||||||| ||||| || || ||| ||| ||| ||||| |||||||||||||| |||||| || ||    | ||  |||    
T  6606282 atgcagtgttcagaggtgcagaaggtgcggtttggtacgcacatgttagctgaagaggcagatgattggtgggtaagtcttttacctgtgcttgaacaag 6606381  T
Q  152 actgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    |  ||| |||||| || |||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||| |||| |||||||||||| |||||    
T  6606382 atggtgctgtggtgacctgggctgtgtttaggagggagttcctgagcaggtactttccggaagatgtccgtggaaagaaagagatcgagtttcttga 6606478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 15537389 - 15537152
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||  | |||| ||||||||||||  || | || ||||| ||||| || || || |||  ||||| |||||||||| |    
T  15537389 agacgtggcttaaggagatcgagaggattttccttgtgatgcagtgcactgaggttcagaaagtgcgattcggtacgcatcagctagctgaggaggctaa 15537290  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||| ||||  | | ||  || |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  15537289 tgattggtgggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 15537190  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  |||||||| |||||||||||    
T  15537189 gatgttcgcgggaagaaggagatcgaattccttgagct 15537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 22043824 - 22043589
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| |||||||| |||||  | ||| | |||||||||||  || | |||||||| || || || || || |||  ||||| |||||| |||||    
T  22043824 agacgtggcttaaagagatggagaggattttcagagtgatgcagtgcactgaggtccagaaagtacgattcggtacgcatcagctagctgaggaagctga 22043725  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||| ||||| ||||| ||| ||| | | ||| ||||  | | ||  || |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  22043724 tgattgctgggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 22043625  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    || ||||| ||||||| |||||||||||||||||||    
T  22043624 gacgttcgcgggaagaaagagatcgagttccttgag 22043589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 22990890 - 22990805
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| | ||||||||  ||||||| |||||| ||||||||||||||    
T  22990890 acttgggctgtgtttaggagagagttcctagacagatactttccaggagatgttctcgggaagaaagagattgagttccttgagct 22990805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 19116258 - 19116166
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  19116258 tgtggtgacttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 19116166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 17670952 - 17671037
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  17670952 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 17671037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 249
Target Start/End: Original strand, 22114210 - 22114415
Alignment:
Q  44 tccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacctt 143  Q
    ||||| ||||||||||  || | ||||||||||| || ||||| || |||  ||||| |||| | || ||||| |||||||| ||||||||| ||||| |    
T  22114210 tccgtttgatgcagtgcactgaggtccagaaggtacgatttggtactcatcagctagctgagcaagccgatgactggtgggttagtcttctacctaccct 22114309  T
Q  144 agaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttc 243  Q
     ||| ||||  | | ||| || ||||| |||||||| |||||  ||||||| |  ||||||||||||||||||||| | |||||||  |||||||| |||    
T  22114310 tgagcaagaaggagctgttgtgacttgagctgtgttcaggagacagttcctgagaagatactttccggaagatgtttgcgggaagaaggagatcgaattc 22114409  T
Q  244 cttgag 249  Q
    ||||||    
T  22114410 cttgag 22114415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 22994684 - 22994563
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||| || || ||||| ||  || |  | ||||||||||||||||| || | |||||||| |||||| |||||    
T  22994684 agacgtggctcaaagagattgagagagtgtttcgggttatgcaatgcactgagattcagaaggtgcgttttggtacgcttatgctagctgaggaagctga 22994585  T
Q  114 tgattggtgggtgagtcttcta 135  Q
    |||||||||| | |||||||||    
T  22994584 tgattggtggattagtcttcta 22994563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 18860428 - 18860345
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  18860428 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 18860345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 22117105 - 22117188
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  22117105 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 22117188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 22125889 - 22125972
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  22125889 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 22125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 19481003 - 19481088
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  19481003 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgaattccttgagct 19481088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 20015193 - 20015276
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || | ||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  20015193 acttgggctgttttcaagagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgag 20015276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 3274947 - 3274874
Alignment:
Q  178 tttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||| |  ||||||||||||||||||||||||||||||| ||||||  |||| ||||||||    
T  3274947 tttaggagagagttcctgagaagatactttccggaagatgttcgtgggaagaaagagattcagtttcttgagct 3274874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 218
Target Start/End: Complemental strand, 21330564 - 21330371
Alignment:
Q  25 aaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtggg 124  Q
    ||||||||||||||  | ||| | ||||||||||||    | || ||||||||||| || || || || ||||||| |||||| | |||||| ||| |||    
T  21330564 aaagagattgagaggatcttcagagtgatgcagtgtagcgaggtgcagaaggtgcggttcggcacgcacatgctagctgaggaagttgatgactggcggg 21330465  T
Q  125 tgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    | ||||||||| ||  | ||||| ||||  ||||||| |||||||||||||| |||||||| |||||  | | |||||| |||||||| |||||    
T  21330464 ttagtcttctacctgtcctagagtaagatggtgttgttgttacttgggctgtatttaggagagagtttttgagcagatattttccggaggatgt 21330371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 21998271 - 21998419
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| || || || || ||| |||||||||| |||||||| |||||||| ||||||||| ||  | ||||| ||||  |||||||  ||||||    
T  21998271 cagaaggtgcggttcggcacgcacatggtagttgaggaagctgatgactggtgggttagtcttctatctgtcctagagcaagatggtgttgttattactt 21998370  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    ||||||| |||||||| || ||  | | ||||||||||| ||| |||||    
T  21998371 gggctgtatttaggagagaatttttgagcagatactttctggacgatgt 21998419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 21968896 - 21969059
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    ||||||||||| ||||||  | ||| | ||||||||||||  | | || ||||||||||| || || || || |||||||||||||| |||||||| |||    
T  21968896 gctcaaagagactgagaggatcttcagagtgatgcagtgtagtgaggtgcagaaggtgcggttcggcacgcacatgctagttgaggaagctgatgactgg 21968995  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttagga 184  Q
    ||||| ||||||||| ||  | ||||| ||||  ||| |   |||||||||||||| |||||||    
T  21968996 tgggttagtcttctacctgtcctagagcaagatggtgctcctgttacttgggctgtatttagga 21969059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 20391937 - 20391871
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagaga 235  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||| ||||| |||| |||||    
T  20391937 tgggctgtgtttaggagggagttcctgaacaggtacttcccagaagatgtccgtggtaagaaagaga 20391871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 19497166 - 19497093
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcga 239  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||    
T  19497166 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcga 19497093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 185
Target Start/End: Original strand, 21981764 - 21981900
Alignment:
Q  49 gtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagagg 148  Q
    ||||||||||||  | | || ||||||||||| || || || || ||| ||| |||||| |||||||| |||||||| ||||||||| ||  | |||||     
T  21981764 gtgatgcagtgtagtgaggtgcagaaggtgcggttcggcacgcacatggtagctgaggaagctgatgactggtgggttagtcttctacctgtcctagagc 21981863  T
Q  149 aagactgtgttgtggttacttgggctgtgtttaggag 185  Q
    ||||  |||||||  ||||||||||||| ||||||||    
T  21981864 aagatggtgttgttattacttgggctgtatttaggag 21981900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 22003891 - 22004060
Alignment:
Q  49 gtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagagg 148  Q
    ||||||||||||  | | || ||||||||||| || || || || ||| ||| |||||| |||||||| |||||||| ||||||||| ||  | |||||     
T  22003891 gtgatgcagtgtagtgaggtgcagaaggtgcggttcggcacgcacatggtagctgaggaagctgatgactggtgggttagtcttctacctgtcctagagc 22003990  T
Q  149 aagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    ||||  ||| |||  ||||||||||||| |||||||| || ||  | | ||||||||||| ||| |||||    
T  22003991 aagatggtgctgttattacttgggctgtatttaggagagaatttttgagcagatactttctggacgatgt 22004060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 21929378 - 21929316
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtctt 132  Q
    ||||||||||| ||||| || |||||| ||| ||| || ||||||||||||||||| ||||||    
T  21929378 cagaaggtgcggtttggtacgcatatgttagctgaagaagctgatgattggtgggtaagtctt 21929316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 24061 - 24298
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| ||||||||||| |||||||| ||||||||||||||  | ||||| |||||||||||||| || || ||||||| |||||| |||||    
T  24061 agacgtggctcaaggagattgagagggtgttccgcgtgatgcagtgttcagaggtccaaaaggtgcgttttggtacgcacatgctagctgaggaagctga 24160  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24161 tgattggtgggtgagtcttctacctaccttagagcaagacggtgttgtggttacttggactgtgtttaggagggagttcctaaacagatactttccggaa 24260  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||| |||||  ||||||||||    
T  24261 gatgttcgcgggaagaaagaaatcgaactccttgagct 24298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 3194 - 2959
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||| || ||||| ||||||||||||||  | ||||||||||||||||||| ||| |||||||||| |||||| |||||    
T  3194 agacgtggctcaaagagattgagagggttttccgcgtgatgcagtgttcagaggtccagaaggtgcgttttgtaacgcatatgctagctgaggaagctga 3095  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||||||||||| ||||| |||||||||||||||  |||||||||||||| ||||| |||||||||||||||||| ||    
T  3094 tgattggtggattagtcttctacctaccttagagcaagacggtgttgtggttacttatgctgtgtttaggagagagtttctaaacagatactttccgaaa 2995  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| ||||||| |||||||||||||||||||    
T  2994 gatgttcgcgggaagaaagagatcgagttccttgag 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 8e-76; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 15458997 - 15459232
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||| || ||||| ||||||||||||||  | ||||||||||||||||||| ||| |||||||||| |||||| |||||    
T  15458997 agacgtggctcaaagagattgagagggttttccgcgtgatgcagtgttcagaggtccagaaggtgcgttttgtaacgcatatgctagctgaggaagctga 15459096  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||||||||||| ||||| |||||||||||||||  |||||||||||||| ||||| |||||||||||||||||| ||    
T  15459097 tgattggtggattagtcttctacctaccttagagcaagacggtgttgtggttacttatgctgtgtttaggagagagtttctaaacagatactttccgaaa 15459196  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| ||||||| |||||||||||||||||||    
T  15459197 gatgttcgcgggaagaaagagatcgagttccttgag 15459232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 17498250 - 17498013
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| |||||| |||  || ||| | ||||||||||||||  | ||||||||||||||||||||||| ||||||||||  ||||| |||||    
T  17498250 agacgtggctcaaggagatttagaaggttttctgcgtgatgcagtgttcagaggtccagaaggtgcgttttggaacgcatatgctagccgaggaagctga 17498151  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||| ||||||||||||| ||| ||||||||||| ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  17498150 tgatcggtgggtgagtctgctacctaccttagagcaagacggtgctgtggttacctgggctgtgtttaggagagagttcctaaacagatactttccggaa 17498051  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  17498050 gatgttcgcgggaagaaagagatcgagttccttgagct 17498013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 19728318 - 19728081
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||| || || ||||| ||  || | || ||||||||||||||| | || || ||||||| |||||| |||||    
T  19728318 agacgtggctcaaagagattgagagagtgtttcgggttatgcaatgcactgaggttcagaaggtgcgttttagtacgcacatgctagctgaggaagctga 19728219  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
     ||||||||||||||||||||| ||||| ||||| ||||  |||  || |||||||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  19728218 cgattggtgggtgagtcttctacctaccctagagcaagatggtgcagttgttacttgggctgtatttaagagagagttcctagacagatactttccggaa 19728119  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  19728118 gatgttcgcgggaagaaagagattgagttccttgagct 19728081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 15263180 - 15262943
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| |||||||||||||||||||||| ||| ||||| ||  || | || ||||||||||||||||| ||||| ||||||| |||||| |||||    
T  15263180 agacgtggctgaaagagattgagagagtgttccatgttatgcaatgcactgaggttcagaaggtgcgttttggtacacacatgctagctgaggaagctga 15263081  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||  | ||||||||| ||||  ||||| ||||  |||  |  ||||||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  15263080 tgattggtgaattagtcttctacctactctagagcaagatggtgcagctgttacttgggctgtgtttaggagagagttcctagacaaatactttccggaa 15262981  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  15262980 gatgttcgcgggaagaaagagattgagttccttgagct 15262943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 15263992 - 15263755
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| |||||||||||||||||||||| ||| ||||| ||  || | || ||||||||||||||||| ||||| ||||||| |||||| |||||    
T  15263992 agacgtggctgaaagagattgagagagtgttccatgttatgcaatgcactgaggttcagaaggtgcgttttggtacacacatgctagctgaggaagctga 15263893  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||  | ||||||||| ||||  ||||| ||||  |||  |  ||||||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  15263892 tgattggtgaattagtcttctacctactctagagcaagatggtgcagctgttacttgggctgtgtttaggagagagttcctagacaaatactttccggaa 15263793  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  15263792 gatgttcgcgggaagaaagagattgagttccttgagct 15263755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 52 - 251
Target Start/End: Original strand, 14578030 - 14578229
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaag 151  Q
    |||||||||||  | |||||||||||||||||||| ||||||  ||||| | |||| ||||||||||||||||| ||||||||| ||||  ||||| |||    
T  14578030 atgcagtgttcagaggtccagaaggtgcgttttggcacacatcagctagctaaggaagctgatgattggtgggttagtcttctacctacactagagcaag 14578129  T
Q  152 actgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |  |||||||||||| |||||||||||| ||||| ||||||||  ||||||||||||||||||||||||| ||||||| ||||||  ||| |||||||||    
T  14578130 atagtgttgtggttatttgggctgtgttcaggagagagttcctggacagatactttccggaagatgttcgcgggaagaaagagattaagtaccttgagct 14578229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 14873156 - 14873393
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||||| || ||||| ||||| ||  || |||| ||||||||||| ||||| ||||||  |||||  ||||| |||||    
T  14873156 agacgtggcttaaggagatcgagagagtttttcgtgttatgcaatgcactgaagttcagaaggtgcgatttggtacacatcagctagccgaggaagctga 14873255  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| |||||| || ||||| ||||| ||||  ||| |   || ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  14873256 tgattggtgggttagtcttatacctaccctagagcaagatggtgctactgtgacttgggttgtgtttaggagggagttcctaagcagatactttccggaa 14873355  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  14873356 gatgttcgcgggaagaaagagattgagttccttgagct 14873393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 12842682 - 12842919
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||  ||||||||||||||||| || || ||| ||||| |  | || ||||| ||||||||||| || || ||||||| |||||| |||||    
T  12842682 agacgtggctcatggagattgagagagtgtttcgggttatgtagtgtacagaggttcagaaagtgcgttttggtacgcacatgctagctgaggaagctga 12842781  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||    ||||| ||||  ||||||| ||||||||||||||||||||||| ||||||||| |||||||| ||| ||||    
T  12842782 tgattggtggattagtcttctacctgttctagagcaagatggtgttgttgttacttgggctgtgtttaggagagagttcctagacagataccttctggaa 12842881  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||| |||| ||||||| |||||| ||||||||||||||    
T  12842882 gatattcgcgggaagaaagagattgagttccttgagct 12842919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 251
Target Start/End: Complemental strand, 15066611 - 15066393
Alignment:
Q  30 gattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagt 129  Q
    |||||||||||| |||||||||||||||||     |||| |||||||||   ||||| ||||||    | | |||||| ||||||||||||||||| |||    
T  15066611 gattgagagagttttccgtgtgatgcagtgcatcgaagttcagaaggtg---tttggtacacatcatttggctgaggaagctgatgattggtgggttagt 15066515  T
Q  130 cttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    |||||| ||||| ||||| ||||  ||  ||| || || || ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  15066514 cttctacctaccctagagcaagatggttctgttgtgacatgagctgtgtttaggagggagttcctaagcagatactttccgaaagatgttcgcgggaaga 15066415  T
Q  230 gagagatcgagttccttgagct 251  Q
     ||| || ||||||||||||||    
T  15066414 aagaaattgagttccttgagct 15066393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 23414361 - 23414598
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||| ||  | |||||||||||||||||  |  | |||||||| || || ||||| || |||  ||||| ||||||||||||    
T  23414361 agacgtggctaaaagagattgaaaggattttccgtgtgatgcagtgcaccgaggtccagaaagtacgatttggtactcatcagctagctgaggaggctga 23414460  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||| ||||  | | ||  || |||||||||||||| ||||| |||||||| |  ||||||||||| |||    
T  23414461 tgattggtgggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggctgtgttcaggagagagttcctgagaagatactttccagaa 23414560  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||||||||||||||||||    
T  23414561 gatgttcgcgggaagaaggagatcgagttccttgagct 23414598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 12502469 - 12502266
Alignment:
Q  49 gtgatgcagtgttctaaagtccagaaggtgcgtttt-ggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagag 147  Q
    |||||||||||  || | || ||||| ||||||||| || ||||||  ||||| |||||| ||||||||||||||||| || |||||| ||| | |||||    
T  12502469 gtgatgcagtgcactgaggttcagaaagtgcgtttttggtacacatcagctagctgaggaagctgatgattggtgggttagccttctacctaacctagag 12502370  T
Q  148 gaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttg 247  Q
     ||||  ||| ||| || ||||||| |||||| ||||| |||||||| |  |||||||||||||||||||||||  |||||| ||| |||||||||||||    
T  12502369 caagagggtgctgttgtgacttgggttgtgttcaggagagagttcctcagaagatactttccggaagatgttcgcaggaagaaagaaatcgagttccttg 12502270  T
Q  248 agct 251  Q
    ||||    
T  12502269 agct 12502266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 251
Target Start/End: Original strand, 12508181 - 12508362
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| ||||| ||||| ||| |||  ||||| ||||||||||||||||| ||| ||| | ||| ||||||| |  |  |||  || ||||| |    
T  12508181 cagaaggtgcgctttggtacacacatgttagcagaggaagctgatgattggtgggttagtattcaacctatcttagagcacaaaggtggagttgttacct 12508280  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| |||||||| |||| |||||||||| |||||||||| ||||||| ||| || ||||| ||||||||    
T  12508281 gggctgtgtttaggagagagttcctgaacatatactttccgcaagatgttcgcgggaagaaagaaattgagtttcttgagct 12508362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 251
Target Start/End: Complemental strand, 16695694 - 16695486
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    |||||||||||||||||  |  | |||||||| || || ||||| || |||  ||||| |||||| ||||||||||||||||| ||| | ||  ||| |     
T  16695694 ttccgtgtgatgcagtgcaccgaggtccagaaagtacgatttggtactcatcagctagctgaggaagctgatgattggtgggttagtttgctgcctaacc 16695595  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    | ||| ||||  | | ||| || |||||||||||||| ||||| |||||| | |  ||||||||||||||||||||||| |||||||  |||||||||||    
T  16695594 ttgagcaagatggagctgttgtgacttgggctgtgttcaggagagagttcatgagaagatactttccggaagatgttcgcgggaagaaggagatcgagtt 16695495  T
Q  243 ccttgagct 251  Q
    |||||||||    
T  16695494 ccttgagct 16695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 24186597 - 24186514
Alignment:
Q  163 gttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttcctt 246  Q
    ||||||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  24186597 gttacttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgagttcctt 24186514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 13249455 - 13249363
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  13249455 tgtggtgacttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 13249363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 13256101 - 13256009
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  13256101 tgtggtgacttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 13256009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 48428858 - 48428766
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  48428858 tgtggtgacttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 48428766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 15712782 - 15712865
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| |||||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  15712782 acttgggctgtttttaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 15712865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 3689347 - 3689262
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  3689347 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 3689262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 6604139 - 6604054
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || |||||||||||||| |  ||||||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  6604139 acttgggctgttttcaggagggagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgaattccttgagct 6604054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 11861824 - 11861675
Alignment:
Q  102 tgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacaga 201  Q
    |||||| ||||||||||||||||| || |||||| |||   ||||| ||||  ||| ||   | ||||||||| |||| ||||| |||||||| |  |||    
T  11861824 tgaggaagctgatgattggtgggttagccttctacctaatctagagcaagatggtgctgctatgacttgggctatgttcaggagagagttcctgagaaga 11861725  T
Q  202 tactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||||||| ||||||| | | |||||||||||||||||    
T  11861724 tactttccggaagatgttcgcgggaagaaataaatcgagttccttgagct 11861675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 12890113 - 12890028
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  12890113 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 12890028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 15344971 - 15345056
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  15344971 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 15345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 15586118 - 15586203
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  15586118 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 15586203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 16639177 - 16639092
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  16639177 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 16639092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 20058780 - 20058865
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  20058780 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 20058865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 26790139 - 26790224
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  26790139 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 26790224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 43166079 - 43165994
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  43166079 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 43165994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 5108265 - 5108350
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||| |||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  5108265 acttaggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 5108350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 5110135 - 5110220
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||| |||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  5110135 acttaggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 5110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 5421656 - 5421741
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || |||||||||||||| |  ||||||||||||||||||||| | |||||||  |||||||| |||||||||||    
T  5421656 acttgggctgttttcaggagggagttcctgagaagatactttccggaagatgtttgcgggaagaaggagatcgaattccttgagct 5421741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 6597459 - 6597374
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||| |||||| || |||||||||||||| |  ||||||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  6597459 actttggctgttttcaggagggagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgaattccttgagct 6597374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 10009004 - 10008919
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  |||||||||||||| |||||||| ||||||| ||||||||| |||||||||||    
T  10009004 acttgggctgttttcaggagagagttcctgagaagatactttccggaggatgttcgcgggaagaaagagatcgaattccttgagct 10008919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 10909614 - 10909529
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  |||||||||||||| |||||||| ||||||| ||||||||| |||||||||||    
T  10909614 acttgggctgttttcaggagagagttcctgagaagatactttccggaggatgttcgcgggaagaaagagatcgaattccttgagct 10909529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 23078640 - 23078818
Alignment:
Q  73 aaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttggg 172  Q
    |||||||| ||||| ||||||  ||| | ||||||   |||||||  |||||| || || ||| ||||| ||||| ||||  ||| ||  || ||||||     
T  23078640 aaggtgcgatttggtacacattcgctggctgaggaaattgatgataagtgggttagcctcctacctaccctagagcaagatggtgctgctgtgacttgga 23078739  T
Q  173 ctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||| ||||||||||  |||||||||| |||| ||||||| ||||||| ||| ||  |||||||||||||    
T  23078740 ctgtgtttaggagagagttcctaagaagatactttctggaaaatgttcgcgggaagaaagaaattaagttccttgagct 23078818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 249
Target Start/End: Original strand, 15399174 - 15399327
Alignment:
Q  96 gctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttccta 195  Q
    ||||| |||||| |||||||| ||||||||  |||||||| ||||| | |   ||||  | | ||| || ||||||||||| || ||||| ||||||||     
T  15399174 gctagctgaggaagctgatgactggtgggttggtcttctacctacccttggacaagaaggagctgttgtgacttgggctgttttcaggagagagttcctg 15399273  T
Q  196 aacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |  ||||||||||||||||||||||| |||||||  ||||| || |||||||||    
T  15399274 agaagatactttccggaagatgttcgcgggaagaaggagattgaattccttgag 15399327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 16753427 - 16753512
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||| | || |||||||||||||| |  ||||||||||||||||||||| | |||||||  |||||||| |||||||||||    
T  16753427 acttgggctattttcaggagggagttcctgagaagatactttccggaagatgtttgcgggaagaaggagatcgaattccttgagct 16753512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 28757850 - 28757773
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagt 129  Q
    |||||||||||  | || ||||||||||| ||||| || || ||||||| ||||||||||||||||||||||||||||    
T  28757850 atgcagtgttccgaggttcagaaggtgcggtttgggacgcacatgctagctgaggaggctgatgattggtgggtgagt 28757773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 53381745 - 53381830
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||| ||| || |||||||||||||| |  ||||||||||||||||||||||| || ||||  |||||||| |||||||||||    
T  53381745 acttgggttgttttcaggagggagttcctgagaagatactttccggaagatgttcgcggaaagaaggagatcgaattccttgagct 53381830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 13317284 - 13317360
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttcct 245  Q
    ||||||||||||||||| || ||||| || |||||||||||||||||||| || || |||| ||||||||| |||||    
T  13317284 tgggctgtgtttaggagagaattcctgaatagatactttccggaagatgtccgaggaaagaaagagatcgaattcct 13317360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 249
Target Start/End: Complemental strand, 15359552 - 15359373
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||| ||||| ||||| || |||  ||||| |||||| |||||||| ||||||||  |||||||| ||||| | ||  ||||  | | ||| || ||||    
T  15359552 cagaaagtgcggtttggtactcatcagctagctgaggaagctgatgactggtgggttggtcttctacctacccttgaacaagaaggagctgttgtgactt 15359453  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||| || ||||| |||||||| |  |||||||||  |||||||||||| |||||||  ||||| || |||||||||    
T  15359452 gggctgttttcaggagagagttcctgagaagatactttttggaagatgttcgcgggaagaaggagattgaattccttgag 15359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 16803606 - 16803755
Alignment:
Q  102 tgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacaga 201  Q
    |||||||||||||||||||||||| ||||| ||| ||| | | ||  ||||  | ||||  || ||||||||||| ||    || |||||| | |  |||    
T  16803606 tgaggaggctgatgattggtgggttagtctgctacctaaccttgatcaagatggagttgatgtgacttgggctgttttctaaagagagttcatgagaaga 16803705  T
Q  202 tactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||||||||  |||||| ||||||||| |||||||||||    
T  16803706 tactttccggaagatgttcgcaggaagaaagagatcgaattccttgagct 16803755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 47127475 - 47127398
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagt 129  Q
    |||||||||||  | || ||||||||||| ||||| || || ||||||| ||||||||||||||||| ||||||||||    
T  47127475 atgcagtgttccgaggttcagaaggtgcggtttgggacgcacatgctagctgaggaggctgatgattagtgggtgagt 47127398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 13027982 - 13028042
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggt 125  Q
    |||| |||||||| |||||||| || || ||||||| |||||| |||||||||||||||||    
T  13027982 aagttcagaaggtacgttttggtacgcacatgctagctgaggaagctgatgattggtgggt 13028042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 15231017 - 15230938
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||||||||||||||| |  ||||||||||| |||||||| |||||||| || || | || ||| |||||||| |||||    
T  15231017 tgggctgtgtttaggagagcattcctaaacaggtactttccagaagatgtccgaggaaggaaagaaatcgagtttcttga 15230938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 15236885 - 15236806
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||||||||||||||| |  ||||||||||| |||||||| |||||||| || || | || ||| |||||||| |||||    
T  15236885 tgggctgtgtttaggagagcattcctaaacaggtactttccagaagatgtccgaggaaggaaagaaatcgagtttcttga 15236806  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 17189793 - 17189739
Alignment:
Q  164 ttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    |||||||||||||||| ||||| || ||||| || |||||||||||||| |||||    
T  17189793 ttacttgggctgtgttcaggagagaattcctgaatagatactttccggaggatgt 17189739  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 10416751 - 10416820
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| || ||||||||||| ||||| || ||||| || ||||||||||| |||||||| || |||||||    
T  10416751 gtggtgacatgggctgtgttcaggagagaattcctgaatagatactttccagaagatgtccgagggaaga 10416820  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 12181768 - 12181691
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagat 236  Q
    |||||| |||||||||||||| ||||| || ||||| || || ||||||||||| |||||| | || |||| ||||||    
T  12181768 tgtggtgacttgggctgtgttcaggagagaattcctgaataggtactttccggaggatgtttgaggaaagaaagagat 12181691  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 2036510 - 2036590
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtctt 132  Q
    |||||||||||  | || ||||||||||| ||||| || || ||| ||| ||| ||||| |||||||||||||| ||||||    
T  2036510 atgcagtgttcagaggtgcagaaggtgcggtttggtacgcacatgttagctgaagaggcagatgattggtgggtaagtctt 2036590  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 2040251 - 2040331
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtctt 132  Q
    |||||||||||  | || ||||||||||| ||||| || || ||| ||| ||| ||||| |||||||||||||| ||||||    
T  2040251 atgcagtgttcagaggtgcagaaggtgcggtttggtacgcacatgttagctgaagaggcagatgattggtgggtaagtctt 2040331  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 14040277 - 14040197
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtctt 132  Q
    |||||||||||  | || ||||||||||| ||||| || || ||| ||| ||| ||||| |||||||||||||| ||||||    
T  14040277 atgcagtgttcagaggtgcagaaggtgcggtttggtacgcacatgttagctgaagaggcagatgattggtgggtaagtctt 14040197  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 16384087 - 16384139
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcg 221  Q
    ||||| ||||| |||||||| || || ||||| ||||||||||||||||||||    
T  16384087 tgggcggtgttcaggagggaatttctgaacaggtactttccggaagatgttcg 16384139  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 17495074 - 17494982
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| |||||||||||||| ||||| || ||||| || || ||||||||||| ||||| || || |||| ||| || ||||| || |||||    
T  17495074 tgtggtgacttgggctgtgttcaggagagaattcctgaataggtactttccggaggatgtccgaggaaagaaagaaattgagtttctagagct 17494982  T

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Target: scaffold0540 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 10215 - 10452
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||  | || ||||||||||||||||| || || ||||||| |||||| ||||     
T  10215 agacgtggctcaaggagattgagagagtgttccgcgtgatgcagtgttcagaggttcagaaggtgcgttttggtacgcacatgctagctgaggaagctgg 10314  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  10315 tgattggtgggtgagtcttctacctaccttagagcaagatggtaatgtggttacttgggctgtgtttaggagggagttcctaagcaaatactttccggaa 10414  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||||||||| |||||||||||    
T  10415 gatgttcgcgggaagaaagagatcgaattccttgagct 10452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 54807 - 55043
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| ||||||||||||||||| || || ||||||||| || | |  ||||||||||||||||||||||||||||||| |||||| |||||    
T  54807 agacgtggctcaaggagattgagagagtgtttcgagttatgcagtgtactgagggtcagaaggtgcgttttggaacacatatgctagctgaggaagctga 54906  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| |||||||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  54907 tgaatggtgggtgagtcttctacctaccttagagcaagatggtgttgtggttacttgggctgtgtttaggagagagttcctagacagatactttccggaa 55006  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |  |||| |||||||||||||||||||||    
T  55007 gatgttcgagaaaaga-agagatcgagttccttgagct 55043  T

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Target: scaffold0075; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 48594 - 48465
Alignment:
Q  118 tggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatg 217  Q
    |||||||||||||||||| ||||||||||| ||||  ||| |||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||    
T  48594 tggtgggtgagtcttctacctaccttagagcaagatggtgctgtggttacttgggctctgtttaggagagagttcctagacagatacttttcggaagatg 48495  T
Q  218 ttcgtgggaagagagagatcgagttccttga 248  Q
    |||| ||||||| ||||||||||||||||||    
T  48494 ttcgcgggaaga-agagatcgagttccttga 48465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 25430292 - 25430055
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||||||||| || || ||||||| ||| ||||||||    
T  25430292 agacgtggctcaaagagattgagagagtgttccgtgtaatgcagtgttcagaggtccagaaggtgcgttttggtacgcacatgctagctgaagaggctga 25430193  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||||||||||||||||||||  ||| || ||| ||||  ||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25430192 tgattggtgggtgagtcttctacttactttggagcaagatggtgctgttgtgacttgggctgtgtttaggagggagttcctaaacagatactttctggaa 25430093  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  25430092 gatgttcgcgggaagaaagagattgagttccttgagct 25430055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 23475066 - 23474829
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||  || | || ||||||||||||||||| || || ||||||| |||  | | |||    
T  23475066 agacgtggctcaaagagattgagagagtgttccgtgttatgcaatgcactgatgttcagaaggtgcgttttggtacgcacatgctagctgaaaaagttga 23474967  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||| || || ||||  |||  || ||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  23474966 tgattggtgggtgagtcttctacctaccctaaagcaagatggtgcagttgttacttgggctgtgtttaggagagagttcctagaccgatactttccggaa 23474867  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
     ||||||| ||||||| |||||| ||||||||||||||    
T  23474866 tatgttcgcgggaagaaagagattgagttccttgagct 23474829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 21331503 - 21331740
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||||||||| || ||||||||  || | || ||||||||||||||||| || || ||||||| |||||| |||||    
T  21331503 agacgtggctcaaagagattgagagagtgttccgggttatgcagtgcactgaggtgcagaaggtgcgttttggtacgcacatgctagctgaggaagctga 21331602  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||||||||||||||||| || ||||| ||||| ||||  | ||||| |||||| ||||||||||||||||  |||||||| | | |||||||||||||    
T  21331603 tgattggtgggtgagtcttttacctaccctagagcaagatggcgttgttgttactcgggctgtgtttaggagatagttcctagaaacatactttccggaa 21331702  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||| || ||||||| ||||||  | |||||||||||    
T  21331703 gatgtccgcgggaagaaagagattaaattccttgagct 21331740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 21883649 - 21883415
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || || ||||||||||| |||| ||||||||||||  |  |||| ||||||||||||||||| || |||  ||| | |||||| |||||    
T  21883649 agacgtggcttaaggatattgagagagttttccttgtgatgcagtgcaccgaagttcagaaggtgcgttttggtactcatcagctggctgaggaagctga 21883550  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | || |||||| |||| || ||| ||||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21883549 tgattggtggattagccttctacctacgttggagcaagacggtgctgttgtgacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 21883450  T
Q  214 gatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||  ||||||| |||||| || ||||||||    
T  21883449 gatgttcacgggaagaaagagatagaattccttga 21883415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 26735340 - 26735542
Alignment:
Q  49 gtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagagg 148  Q
    |||||||||||  || | || ||||||||||||||||| || || ||||||| |||||| ||||||||||||| | | ||||||||| |||| |||  |     
T  26735340 gtgatgcagtgcactgaggttcagaaggtgcgttttggtacgcacatgctagctgaggaagctgatgattggtagattagtcttctacctactttaaggc 26735439  T
Q  149 aagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||  ||| ||| ||||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||| ||||||| |||||| |||||||||||    
T  26735440 aagatggtgctgttgttacttgggctgtgtttaggagagagttcctagaccgatacttttcggaagatgttcgcgggaagaaagagattgagttccttga 26735539  T
Q  249 gct 251  Q
    |||    
T  26735540 gct 26735542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 251
Target Start/End: Complemental strand, 23461720 - 23461539
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||| ||||||||||| |||||   ||| | |||||| ||||||||||||||||| || |||||| ||||| ||||| ||||  ||| ||  || ||||    
T  23461720 cagaaagtgcgttttggtacacaacagctggctgaggaagctgatgattggtgggttagccttctacctaccctagagcaagagggtgctgctgtgactt 23461621  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||| |||||||||||||| |  ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  23461620 gggctgtgttcaggagggagttcctgagaagatactttccggaagatgttcgcgggaagaaagaaatcgagttccttgagct 23461539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 251
Target Start/End: Complemental strand, 20804413 - 20804232
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||| ||||||||||| ||||||   |||| |||||| ||||||||||||||||| || |||||| ||| | ||||| ||||| ||| ||  || ||||    
T  20804413 cagaaagtgcgttttggtacacatcaactagctgaggaagctgatgattggtgggttagccttctacctaacctagagcaagacggtgctgctgtgactt 20804314  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||| ||||| |||||||| |  ||||||||||| ||||||||||| ||||||| ||| |||||||||||||||||    
T  20804313 gggctgtgttcaggagagagttcctgagaagatactttccagaagatgttcgcgggaagaaagaaatcgagttccttgagct 20804232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 23526835 - 23526686
Alignment:
Q  102 tgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacaga 201  Q
    |||||| |||||||| |||||||| |||||||   ||||| ||||| ||||  ||| ||   | |||||||||||||||||||||||||||||||  |||    
T  23526835 tgaggaagctgatgactggtgggttagtcttcagcctaccctagagcaagatggtgctgctctgacttgggctgtgtttaggagggagttcctaagaaga 23526736  T
Q  202 tactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||||||||||    
T  23526735 tacttttcggaagatgttcgcgggaagaaagagattgagttccttgagct 23526686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 251
Target Start/End: Original strand, 23536811 - 23536966
Alignment:
Q  96 gctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttccta 195  Q
    ||||| |||||| ||||||||||||||||| ||||| ||| ||| | | ||| ||||  | | ||| || |||||||||||||| ||||| ||||||||     
T  23536811 gctagctgaggatgctgatgattggtgggttagtctgctacctaaccttgagcaagatggagctgttgtgacttgggctgtgttcaggagagagttcctg 23536910  T
Q  196 aacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |  |||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  23536911 agaagatactttcaggaagatgttcgcgggaagaaagagatcgagttccttgagct 23536966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 27522130 - 27522038
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  27522130 tgtggtgacttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 27522038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 40712504 - 40712412
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  40712504 tgtggtgacttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 40712412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 21982161 - 21982240
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||| |||||| ||||| |||||    
T  21982161 tgggctgtgtttaggagggagttcctgaacaggtactttccagaagatgttcgtggaaagaaagagattgagtttcttga 21982240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 22329556 - 22329639
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  22329556 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgtgggaagaaggagatcgagttccttgag 22329639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 27682069 - 27682152
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| |||||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  27682069 acttgggctgtttttaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 27682152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 19773686 - 19773592
Alignment:
Q  157 gttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||| || ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  19773686 gttgttgtgacttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 19773592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 16360219 - 16360134
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  16360219 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 16360134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 21631073 - 21631150
Alignment:
Q  174 tgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||    
T  21631073 tgtgtttaggagagagttcttgaacagatactttccggaagatgttcgcgggaagaaagagattgagtttcttgagct 21631150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 27665172 - 27665257
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  27665172 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 27665257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 34570211 - 34570126
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  34570211 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 34570126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 14996408 - 14996491
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  14996408 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 14996491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 37288165 - 37288248
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  37288165 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 37288248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 41774560 - 41774478
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  41774560 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttga 41774478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 27614073 - 27613988
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||| ||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  27614073 acttgggttgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 27613988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 18782986 - 18782751
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||||||||||||  |  | |||||||| || || ||||| |  ||   ||||| |||||| |||||    
T  18782986 agacgtggcttaaagagattgagaggattttccgtgtgatgcagtgcaccgaggtccagaaagtacgatttggtattcaccagctagctgaggaagctga 18782887  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| ||| |||| ||||| ||| ||| | | ||| ||||  | | ||  || ||||||||||||||  |||| |||||| | |  |||||||||||||||    
T  18782886 tgactggagggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggctgtgttctggagagagttcttgagaagatactttccggaa 18782787  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||  |||||||  ||||||||||||||||||    
T  18782786 gatgttcacgggaagaaggagatcgagttccttgag 18782751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 22138385 - 22138302
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  |||||||||| |||||||||||| |||||||  ||||||||||||||||||    
T  22138385 acttgggctgttttcaggagagagttcctgagaagatactttctggaagatgttcgcgggaagaaggagatcgagttccttgag 22138302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 29472742 - 29472825
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||  |||||||  ||||||||||||||||||    
T  29472742 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttctcgggaagaaggagatcgagttccttgag 29472825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 22351636 - 22351551
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||| | |  ||||||||||| ||||||||||| |||||||  |||||||| |||||||||||    
T  22351636 acttgggctgtgttcaggagagagttcttgaggagatactttccagaagatgttcgcgggaagaaggagatcgaattccttgagct 22351551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 21560694 - 21560773
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||||||||||||||||||||| || |  |||||||| |||||||| | ||| |||| |||||||||||| |||||    
T  21560694 tgggctgtgtttaggagggagttcctgaaaaagtactttccagaagatgtccatggaaagaaagagatcgagtttcttga 21560773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 14883543 - 14883620
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagt 129  Q
    |||||||||||  | || || |||||||| ||||| || || ||||||| ||||||||||||||||||||||||||||    
T  14883543 atgcagtgttccgaggttcaaaaggtgcggtttgggacgcacatgctagctgaggaggctgatgattggtgggtgagt 14883620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 20770846 - 20770777
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| || ||| ||||||| ||||| || ||||| || |||||||||||||||||||| || |||||||    
T  20770846 gtggtgacatggactgtgttcaggagagaattcctgaatagatactttccggaagatgtccgagggaaga 20770777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 20779621 - 20779552
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| || ||| ||||||| ||||| || ||||| || |||||||||||||||||||| || |||||||    
T  20779621 gtggtgacatggactgtgttcaggagagaattcctgaatagatactttccggaagatgtccgagggaaga 20779552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 20825161 - 20825092
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| || ||||||||||| |||||||| ||| | || ||||||||||| |||||||| || |||||||    
T  20825161 gtggtgacatgggctgtgttcaggagggaattcttgaatagatactttccagaagatgtccgagggaaga 20825092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 28891602 - 28891671
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| || ||| ||||||| ||||| || ||||| || |||||||||||||||||||| || |||||||    
T  28891602 gtggtgacatggactgtgttcaggagagaattcctgaatagatactttccggaagatgtccgagggaaga 28891671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 23670327 - 23670255
Alignment:
Q  173 ctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttcct 245  Q
    ||||||||||||||||||| || | ||| ||||||||||| ||||| || || |||| |||||| || |||||    
T  23670327 ctgtgtttaggagggagtttctgagcaggtactttccggaggatgtccgaggtaagaaagagattgaattcct 23670255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 18404413 - 18404650
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||  | ||| |||||||||||||||| || || ||||||| ||| || |||||    
T  18404413 agacgtggctcaaagagattgagagagtgttccgtgtaatgtagtgttcagaggtctagaaggtgcgttttggtacgcacatgctagctgaagaagctga 18404512  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| |||| |||||| ||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||    
T  18404513 tgattggtgggtgagtcttctacctactttagagcaagatggtgttgtggttacttgggctgtgtttaggagagagttcctaaatagatactttccagaa 18404612  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||| ||||||||||||||    
T  18404613 gatgttcgcgggaagaaggagattgagttccttgagct 18404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 19667242 - 19667013
Alignment:
Q  22 ctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggt 121  Q
    ||||| ||||||||||||||||| || || ||||||||  || | |  |||||||||||||||||||| |||||||||| ||| || |||||||| ||||    
T  19667242 ctcaaggagattgagagagtgtttcgagttatgcagtgcactgagggtcagaaggtgcgttttggaacgcatatgctagctgatgaagctgatgactggt 19667143  T
Q  122 gggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcg 221  Q
    |||||||||||||| |||| |||||| ||||  |||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  19667142 gggtgagtcttctacctactttagagcaagatggtgttgtggttacttgagctgtgtttaggagagagttcctagacagatactttccggaagatgttcg 19667043  T
Q  222 tgggaagagagagatcgagttccttgagct 251  Q
     ||||||| |||||| ||||||||||||||    
T  19667042 cgggaagaaagagattgagttccttgagct 19667013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 19868422 - 19868185
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||| |  |  |||| ||||||||||||||||| ||||||  ||| |||||| | ||||     
T  19868422 agacgtggcttaaagagattgagagagttttccgtgtgatgcagggcaccgaagttcagaaggtgcgttttggtacacatcagctggttgagtaagctgg 19868323  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| |||||| ||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  19868322 tgattggtggattagtcttctacctacattagagcaagacggtgctgtggttacttgggttgtgtttaggagggagttcctgaacagatactttccggaa 19868223  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  19868222 gatgttcgcgggaagaaagagattgagttccttgagct 19868185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 18181864 - 18182101
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||| || |||||||| ||||| ||  || |||| ||||||||||||||||| || |||  | ||| |||||| | |||    
T  18181864 agacgtggctcaaagagattgagagggttttccgtgttatgcaatgcactgaagttcagaaggtgcgttttggtacgcatcagttagctgaggaagttga 18181963  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||||  ||||| ||||  |||  ||  |||||||||||||||||||||| ||||||||| |||||||||||||| ||    
T  18181964 tgattggtggattagtcttctacctactctagagcaagatggtgcagttattacttgggctgtgtttaggagagagttcctagacagatactttccgaaa 18182063  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  18182064 gatgttcgcgggaagaaagagattgagttccttgagct 18182101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 23082227 - 23081990
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||  |  | || ||||||||||||||||| ||  | |||||| ||||||| ||| |    
T  23082227 agacgtggcttaaagagattgagagagtgttccgtgtgatgcagtgcacagaggttcagaaggtgcgttttggtacggacatgctatttgaggaagctaa 23082128  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| || ||| | ||  ||| ||| |||||||||| |||||||||||| ||||| ||| || ||||||||||||||    
T  23082127 tgattggtggattagtcttctacctactttggagcaggatggtgctgttgttacttgggttgtgtttaggagagagtttctagactgatactttccggaa 23082028  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| || |||||||||||    
T  23082027 gatgttcgcgggaagaaagagattgaattccttgagct 23081990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 251
Target Start/End: Complemental strand, 22437644 - 22437436
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    |||||||||||||| ||  || |||| ||||||||||| ||||| ||||||  ||| | |||||| | ||||||||||| ||| ||||||||| |||||     
T  22437644 ttccgtgtgatgcaatgcactgaagttcagaaggtgcgatttggtacacatcagctggctgaggaagttgatgattggtcggttagtcttctacctaccc 22437545  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    ||||| ||||  ||| ||  || ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||| ||||||| |||||| |||||    
T  22437544 tagagcaagatggtgctgctgtgacttgggatgtgtttaggagggagttcctaagaagatacttgccggaagatgttcgcgggaagaaagagattgagtt 22437445  T
Q  243 ccttgagct 251  Q
    |||||||||    
T  22437444 ccttgagct 22437436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 18660672 - 18660486
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggt 164  Q
    |||| ||||||||||||||||| || || ||| |||  ||||| ||||||||||||||||| ||| ||| | ||| ||||||| | |   |||  || ||    
T  18660672 aagttcagaaggtgcgttttggtacgcacatgttagcggaggaagctgatgattggtgggttagtattcaacctatcttagagtacggaagtggagttgt 18660573  T
Q  165 tacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||| |||||| ||||| ||| ||||    
T  18660572 tacttgggctgtgtttaggagagagttcctgaacagatactttccggaagatgttcgcgggaagaaagagattgagtttctttagct 18660486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 251
Target Start/End: Original strand, 25958281 - 25958467
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggt 164  Q
    |||||||||||||||||||||| || || ||||||| |||||| ||||||||||||||||| ||| ||| | | | ||||||| | |   |||  || ||    
T  25958281 aagtccagaaggtgcgttttggtacgcacatgctagctgaggaagctgatgattggtgggttagtattcaacccatcttagagcatggaggtggagttgt 25958380  T
Q  165 tacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||| ||||||| |||||||||| | || ||||||||||||||||||||||| ||||||| | |||| ||||| ||||||||    
T  25958381 tacttgggccgtgtttaagagggagttcttgaatagatactttccggaagatgttcgcgggaagaaaaagattgagtttcttgagct 25958467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 251
Target Start/End: Original strand, 23084358 - 23084539
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| ||||| || || ||||||| |||||| ||||| |||| |||||||||| ||||| ||| | ||||| | |   |||  || |||||||    
T  23084358 cagaaggtgcgctttggtacgcacatgctagatgaggaagctgacgattagtgggtgagtattctacctatcctagagcacggaggtggagttgttactt 23084457  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| ||||||||| ||| ||||||||| ||||||||||| ||||||| |||||| ||||| ||||||||    
T  23084458 gggctgtgtttaggagagagttcctagacatatactttcctgaagatgttcgcgggaagaaagagattgagtttcttgagct 23084539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 27558293 - 27558530
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | |||||||||||| ||||  || | || ||||| ||||| || || || |||  ||||| |||||| |||||    
T  27558293 agacgtggcttaaggagattgagaggattttccgtgtgatgtagtgcactgaggttcagaaagtgcgattcggtacgcatcagctagctgaggaagctga 27558392  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| || |||| | ||| | ||||| ||||| ||| |   || |||||||||||||||||||| |||||||| |  |||  ||||||||||    
T  27558393 tgattggtgggttagccttcaacctaacctagagcaagacggtgctactgtgacttgggctgtgtttaggagagagttcctgagaagaacctttccggaa 27558492  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  27558493 gatgttcgcgggaagaaagagatcgagttccttgagct 27558530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 241
Target Start/End: Original strand, 25756094 - 25756314
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    ||||||||||||||||||  | |||||||||||||||||  || |||| ||||| ||||| || || || |||  ||||| |||||| ||||||||||||    
T  25756094 gctcaaagagattgagaggattttccgtgtgatgcagtgcactgaagttcagaaagtgcgattcggtacgcatcagctagatgaggaagctgatgattgg 25756193  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||| || |||||  ||| | ||||  ||||  ||| ||  || |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||    
T  25756194 tgggttagccttctgcctaacctagaacaagaaggtgctgctgtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttc 25756293  T
Q  221 gtgggaagagagagatcgagt 241  Q
    | |||||||  ||||||||||    
T  25756294 gcgggaagaaggagatcgagt 25756314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 21765616 - 21765379
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||  | |||||||| ||||||||  || | || ||||| ||||||||||| ||||||  ||| | |||||| |||||    
T  21765616 agacgtggcttaaggagatcgagaggattttccgtgttatgcagtgcactgaggttcagaaagtgcgttttggtacacatcagctggctgaggaagctga 21765517  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| || |||||| ||| | || || ||||  ||| ||  || ||||||| |||||| ||||| | |||||| |  |||||||||||||||    
T  21765516 tgattggtgggttagccttctacctaacctaaagcaagatggtgctgctgtgacttgggttgtgttcaggagagcgttcctgagaagatactttccggaa 21765417  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||| ||||| |||||||||||    
T  21765416 gatgttcgcgggaagacagaaatcgacttccttgagct 21765379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 5835715 - 5835945
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||| |||||||||||  | || ||||| ||||| ||  || |||  ||||| ||||||||||| || |||  ||| |  ||||| |||||||| |||    
T  5835715 gctcaaggagattgagaggatctttcgtgttatgcaatgcactgaagatcagaaagtgcgttttggtacgcatcagctggccgaggaagctgatgactgg 5835814  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||| ||||| ||| ||| | | ||| ||||  | | ||| ||||||||||||||||| ||||| |||||||  |  ||||||||||||||||||||||    
T  5835815 tgggttagtctgctacctaaccttgagcaagagggagctgttgttacttgggctgtgttcaggagagagttcccgaggagatactttccggaagatgttc 5835914  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | |||||||  ||||||||||||||||||||    
T  5835915 gcgggaagatggagatcgagttccttgagct 5835945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 251
Target Start/End: Original strand, 22828877 - 22829103
Alignment:
Q  25 aaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtggg 124  Q
    ||||||||||||||  | ||| |||| ||||||||  || |||  ||||| ||||| ||||| || |||  ||||| |||||| ||||||||||||||||    
T  22828877 aaagagattgagaggattttcggtgttatgcagtgcactgaagatcagaaagtgcggtttggtactcatcagctagctgaggaagctgatgattggtggg 22828976  T
Q  125 tgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgg 224  Q
    | ||||||| | ||||| | |   ||||  | ||||| || || ||||||||||| ||||| |||||||| |  ||||||||| ||||||||||||| ||    
T  22828977 ttagtcttcaacctacccttggctaagaaggagttgttgtgacctgggctgtgttcaggagagagttcctgagaagatacttttcggaagatgttcgcgg 22829076  T
Q  225 gaagagagagatcgagttccttgagct 251  Q
    |||||  ||||| || |||||||||||    
T  22829077 gaagaaggagattgaattccttgagct 22829103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 27558605 - 27558683
Alignment:
Q  173 ctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  27558605 ctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgagttccttgagct 27558683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 29589071 - 29589156
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  29589071 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 29589156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 28259829 - 28259912
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || | |||||||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  28259829 acttgggctgttttcaagagggagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 28259912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 28286087 - 28286004
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || | |||||||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  28286087 acttgggctgttttcaagagggagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 28286004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 28313279 - 28313196
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || |||||||||||||| |  ||||||||||||||||||||| | |||||||  ||||||||||||||||||    
T  28313279 acttgggctgttttcaggagggagttcctgagaagatactttccggaagatgtttgcgggaagaaggagatcgagttccttgag 28313196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 28338578 - 28338661
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || | |||||||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  28338578 acttgggctgttttcaagagggagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 28338661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 16575539 - 16575454
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||    
T  16575539 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccatgagct 16575454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 16619841 - 16619926
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||    
T  16619841 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccatgagct 16619926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 2871434 - 2871517
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||| ||||||||||| |||||||  ||||||||||||||||||    
T  2871434 acttgggctgttttcaggagagagttcctgagaagatactttccagaagatgttcgcgggaagaaggagatcgagttccttgag 2871517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 24292261 - 24292496
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | ||||| || ||||||||  || |||  ||||||||||| ||||| || |||  |||||  ||||| |||||    
T  24292261 agacgtggcttaaggagattgagaggattttccgagttatgcagtgcactgaagatcagaaggtgcggtttggtactcatcagctagccgaggaagctga 24292360  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaaca-gatactttccgga 212  Q
    ||| ||||||||   ||||||  ||||| | | | ||||  | | ||| || ||||||||||| || ||||| ||||||||  | | |||||||||||||    
T  24292361 tgactggtgggttgctcttctgcctacccttgggcaagagggagctgttgtgacttgggctgttttcaggagagagttcctggagaagatactttccgga 24292460  T
Q  213 agatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||||||| |||||||  |||||||||||||||||    
T  24292461 agatgttcgcgggaagaaggagatcgagttccttga 24292496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 27206271 - 27206188
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||| | |  ||||||||||||||||||||||| |||||||  |||||||| |||||||||    
T  27206271 acttgggctgttttcaggagagagttcttgagaagatactttccggaagatgttcgcgggaagaaggagatcgaattccttgag 27206188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 27242957 - 27243040
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||| | |  ||||||||||||||||||||||| |||||||  |||||||| |||||||||    
T  27242957 acttgggctgttttcaggagagagttcttgagaagatactttccggaagatgttcgcgggaagaaggagatcgaattccttgag 27243040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 229
Target Start/End: Complemental strand, 19882162 - 19881985
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaag 151  Q
    |||||||| ||| || | || |||||||| ||||| || || |||||||  ||||||||||||||||||||||| |||||  || ||    | ||| | |    
T  19882162 atgcagtgctctgaaattcaaaaggtgcggtttgggacgcacatgctagcagaggaggctgatgattggtgggtaagtctgttacctgtgcttgagcagg 19882063  T
Q  152 actgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    |  |||  ||||| || ||||||||||| |||||||| ||||| || || ||||||||||||||||| ||||| ||||    
T  19882062 atggtgcagtggtaacctgggctgtgttcaggagggaattcctgaataggtactttccggaagatgtccgtggcaaga 19881985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 18326605 - 18326454
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| ||||| || || ||| |||  ||||| ||||||||||||||||||||| ||||| | | | ||| | | |   |||  || ||||| |    
T  18326605 cagaaggtgcgctttggtacgcacatgttagcggaggaagctgatgattggtgggtgagtgttctaccaatcctagggaacggaggtgaagttgttacat 18326506  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcg 221  Q
    || || |||||||||| ||||| || ||||| ||||||||||||||||||||    
T  18326505 ggactatgtttaggagagagtttctgaacaggtactttccggaagatgttcg 18326454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 15462995 - 15462925
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    |||||| |||||| |||| || |||||||| ||||| || |||||||||||||||||||| || |||||||    
T  15462995 tgtggtgacttggactgtattcaggagggaattcctgaatagatactttccggaagatgtccgagggaaga 15462925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 19456675 - 19456590
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| || |||||||| || ||||||||||| ||||| || || |||| ||| |||||||| || |||||    
T  19456675 acttgggctgtgttcaggagagaattcctaaataggtactttccggaggatgtccgaggaaagaaagaaatcgagtttctggagct 19456590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 19466820 - 19466735
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| || |||||||| || ||||||||||| ||||| || || |||| ||| |||||||| || |||||    
T  19466820 acttgggctgtgttcaggagagaattcctaaataggtactttccggaggatgtccgaggaaagaaagaaatcgagtttctggagct 19466735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 19485948 - 19486016
Alignment:
Q  174 tgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    |||||||||||||||||| || ||||| |||||||| |||||||| | ||| ||||  |||||||||||    
T  19485948 tgtgtttaggagggagtttctgaacaggtactttccagaagatgtccatggaaagaaggagatcgagtt 19486016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 19438654 - 19438584
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagat 236  Q
    ||||||||||| || |||||||| ||||| || || ||||| ||||||||||| || ||||||| ||||||    
T  19438654 acttgggctgtattcaggagggaattcctgaataggtacttcccggaagatgtccgagggaagaaagagat 19438584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 21566614 - 21566696
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    ||||| || |||||||| || |||||||| ||||| || || || |||||||||||||| ||||| ||||  |||||||||||    
T  21566614 gtggtgacctgggctgtattcaggagggaattcctgaataggtattttccggaagatgtccgtggtaagaaggagatcgagtt 21566696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 34642208 - 34642290
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    ||||| || ||||||||||| |||||||| ||||| || ||||| ||||||| |||||| ||||| |||| ||| || |||||    
T  34642208 gtggtgacctgggctgtgttcaggagggaattcctgaatagatattttccgggagatgtccgtggcaagaaagaaatagagtt 34642290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 20010124 - 20010193
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| || ||| |||| || |||||||| ||||| || |||||||||||||||||||| || |||||||    
T  20010124 gtggtaacatggactgtattcaggagggaattcctgaatagatactttccggaagatgtccgagggaaga 20010193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 24515047 - 24515116
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| |||||||||||||| ||||| || ||||| || || ||||||||||| ||||| || |||||||    
T  24515047 gtggtgacttgggctgtgttcaggagagaattcctgaataggtactttccggaggatgtccgagggaaga 24515116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 21475185 - 21475133
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    |||||||||||||||||||| |  ||| ||||||| ||||||| |||||||||    
T  21475185 acttgggctgtgtttaggagagcattcttaaacaggtactttcgggaagatgt 21475133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 15109 - 15345
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| ||||||||||||||||| || || ||||||||| || | |  |||||||||||||||||||| |||||||||| |||||| |||||    
T  15109 agacgtggctcaaggagattgagagagtgtttcgagttatgcagtgtactgagggtcagaaggtgcgttttggaacgcatatgctagctgaggaagctga 15208  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| |||||||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  15209 tgactggtgggtgagtcttctacctaccttagagcaagatggtgttgtggttacttgggctgtgtttaggagagagttcctagacagatactttccggaa 15308  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |  |||| |||||||||||||||||||||    
T  15309 gatgttcgagaaaaga-agagatcgagttccttgagct 15345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 16241189 - 16241419
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||||||||||||||| || |||||  |||||||||||| | ||||||||||||||||||||||||  |||||| ||| |||||| ||||||||||||    
T  16241189 gctcaaagagattgagagggttttccgcatgatgcagtgttatgaagtccagaaggtgcgttttggaatgcatatgttagctgaggaagctgatgattgg 16241288  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||||||||||||| |||| |||||| ||||  ||  ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16241289 tgggtgagtcttctacctactttagagcaagatggttctgtggttacctgggctgtgtttaggagggagttcctatacagatactttccggaagatgttc 16241388  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| ||| || ||||||||||||||    
T  16241389 gcgggaagaaagaaattgagttccttgagct 16241419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 16220128 - 16219891
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||| ||||||||||||||||||| ||||||||||| ||  || | || ||||||||||||||||| || ||||| ||||  ||||| |||||    
T  16220128 agacgtggctcgaagagattgagagagtgtttcgtgtgatgcaatgcactgaggttcagaaggtgcgttttggtacgcatatcctagccgaggaagctga 16220029  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||| ||||| ||||  | |  || ||||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  16220028 tgattggtgggtgagtcttctacctaccctagagcaagatagcgcggttgttacttgggcagtgtttaggagagagttcctagacagatactttccggaa 16219929  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  16219928 gatgttcgcgggaagaaagagattgagttccttgagct 16219891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 15144021 - 15144258
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||| |||||||||| |||||||||||||||||  |  |||| ||||||||||||||||| ||||||  ||| | |||||| |||||    
T  15144021 agacgtggcttaaggaggttgagagagttttccgtgtgatgcagtgcaccgaagtacagaaggtgcgttttggtacacatcagctggctgaggaagctga 15144120  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| || ||| ||||| ||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||| |||    
T  15144121 tgattggtggattagtcttctacctactttggagcaagacggtgctgtggttacttgggctgtgtttaggagggcgttcataaacatatactttccagaa 15144220  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
     ||||||| ||||||| |||||| ||||||||||||||    
T  15144221 tatgttcgcgggaagaaagagattgagttccttgagct 15144258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 14700399 - 14700162
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||| ||||| || ||||| ||  || |||| ||||||||||||||||| ||||| |||| || ||| || |||||    
T  14700399 agacgtggctcaaagagattgagagagttttccgggttatgcaatgcactgaagtacagaaggtgcgttttggtacacacatgcgagctgaagaagctga 14700300  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||| ||||||||| ||||| ||| | ||||| ||||  |||| || |||||||||| |||||||||||| || |||||| ||||||||||||| |||    
T  14700299 tgattgatgggtgagtattctacctatcgtagagcaagatggtgtagttgttacttgggttgtgtttaggagagaattcctagacagatactttccagaa 14700200  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| | ||||||| |||||| ||||||||||||||    
T  14700199 gatgtttgcgggaagaaagagattgagttccttgagct 14700162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 14163410 - 14163173
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||| || || ||||| || || ||| ||||| || | | ||||| ||||||||||||||| |||||||||| |||||| || ||    
T  14163410 agacgtggctcaaagagatcgaaagggtgtttcgagttatgtagtgtactgaggaccagagggtgcgttttggaacgcatatgctagctgaggaagcgga 14163311  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||  | ||||  ||||  ||| ||| ||||| ||||| || |||||||| |||||||||| ||||||||||||||||    
T  14163310 tgattggtggatcagtcttctacctgtcctagaacaagatggtgctgttgttacatgggccgtatttaggagagagttcctaagcagatactttccggaa 14163211  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  14163210 gatgttcgagggaagaaagagatagagttccttgagct 14163173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 8871 - 8742
Alignment:
Q  118 tggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatg 217  Q
    |||||||||||||||||| ||||||||||| ||||  ||| |||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||    
T  8871 tggtgggtgagtcttctacctaccttagagcaagatggtgctgtggttacttgggctctgtttaggagagagttcctagacagatacttttcggaagatg 8772  T
Q  218 ttcgtgggaagagagagatcgagttccttga 248  Q
    |||| ||||||| ||||||||||||||||||    
T  8771 ttcgcgggaaga-agagatcgagttccttga 8742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 16247748 - 16247985
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||||||||||||  || | |||||||| || || ||||| || |||  ||||| |||| |||||||    
T  16247748 agacgtggcttaaagagattgagaggattttccgtgtgatgcagtgcactgaggtccagaaagtacgatttggtactcatcagctagctgagaaggctga 16247847  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||| ||||  | | ||  || |||||||||||||| ||||| ||||||||||  |||||||||||||||    
T  16247848 tgattggtgggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggctgtgttcaggagagagttcctaagaagatactttccggaa 16247947  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||||||||||||||||||    
T  16247948 gatgttcgcgggaagaaggagatcgagttccttgagct 16247985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 18603891 - 18604128
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | |||||||||||||||||  || | ||||||||||| || ||||| || |||  ||||| |||||| |||||    
T  18603891 agacgtggcttaaggagattgagaggatattccgtgtgatgcagtgcactgaggtccagaaggtacgatttggtactcatcagctagctgaggaagctga 18603990  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||| | ||||| | ||| ||||  | | |||||| |||||||||||||| ||||| |||||| | |  |||||||||||||||    
T  18603991 tgattggtgggttagtcttcaacctacccttgagcaagaaggagctgtggtgacttgggctgtgttcaggagagagttcatgagaagatactttccggaa 18604090  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  |||||||| |||||||||||    
T  18604091 gatgttcgcgggaagaaggagatcgaattccttgagct 18604128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 13514290 - 13514053
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||| ||| ||||  || | || ||||| || |||||||| || |||  ||||| |||||| |||||    
T  13514290 agacgtggcttaaagagattgagaggattttccgtgttatgtagtgcacttaggttcagaaagttcgttttggtactcatcagctagctgaggaagctga 13514191  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||  ||||  | | ||  || |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  13514190 tgattggtgggttagtctgctacctaaccttgaacaagatggagctgatgtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 13514091  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||||||||| |||||||||||    
T  13514090 gatgttcgcgggaagaaagagatcgaattccttgagct 13514053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 251
Target Start/End: Original strand, 16349846 - 16350051
Alignment:
Q  46 cgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttag 145  Q
    ||||||||||||||  || | || ||||| ||||| ||||| ||||||  ||| | |||||| || |||||||||||||| || |||||| ||| | |||    
T  16349846 cgtgtgatgcagtgcactgaggttcagaaagtgcgatttggtacacatcagctggctgaggaagccgatgattggtgggttagccttctacctaacctag 16349945  T
Q  146 aggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttcct 245  Q
    || ||||  ||| ||  || |||||||||||||| ||||| |||||| | |  ||||||||||||||||||||||| ||||||| ||| |||| ||||||    
T  16349946 agaaagatggtgctgctgtgacttgggctgtgttcaggagagagttcttgagaagatactttccggaagatgttcgcgggaagaaagaaatcgggttcct 16350045  T
Q  246 tgagct 251  Q
    ||||||    
T  16350046 tgagct 16350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 18223546 - 18223782
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||| ||||  | |||||||||||||||||  |  | |||||||| || || ||||| || |||  ||||| |||||| |||||    
T  18223546 agacgtggctaaaagagatttagaggattttccgtgtgatgcagtgcaccgaggtccagaaagtacgatttggtactcatcagctagctgaggaagctga 18223645  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||| ||||  | | |||| | |||| ||||||||| ||||| |||||||| |  ||||||||||| |||    
T  18223646 tgattggtgggttagtctgctacctaaccttgagcaagatggagctgtg-tgacttaggctgtgttcaggagagagttcctgagaagatactttccagaa 18223744  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||||||||||||||||||    
T  18223745 gatgttcgcgggaagaaggagatcgagttccttgagct 18223782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 8390197 - 8390112
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  8390197 acttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 8390112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 17091376 - 17091461
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  17091376 acttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 17091461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 19775020 - 19775105
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| |||||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  19775020 acttgggctgtttttaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 19775105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 13879894 - 13879815
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||| |||| |||||||||||| |||||    
T  13879894 tgggctgtgtttaggagggagttcctgagcaggtactttccggaagatgtccgtggaaagaaagagatcgagtttcttga 13879815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 12480385 - 12480300
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  12480385 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 12480300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 23959532 - 23959447
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  23959532 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 23959447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 40476825 - 40476740
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  40476825 acttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgaattccttgagct 40476740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 14300206 - 14300289
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||   |||||||||||||||||    
T  14300206 acttgggctgttttcaggagagagttcctgaggagatactttccggaagatgttcgcgggaagaagcagatcgagttccttgag 14300289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 16233219 - 16233301
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| || ||||  |||||||||||||||||    
T  16233219 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcggaaagaaggagatcgagttccttga 16233301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 8709461 - 8709388
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    |||||||||||||||||||||||||| ||||  |||||||| |||||||| ||||| ||||  |||||||||||    
T  8709461 tgggctgtgtttaggagggagttcctgaacaagtactttccagaagatgtccgtggaaagaaggagatcgagtt 8709388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 8049850 - 8049933
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || | ||| |||||| | |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  8049850 acttgggctgttttcaagagagagttcatgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgag 8049933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 15267572 - 15267513
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    |||||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||||||    
T  15267572 tgtggtgacttgggctgtgttcaggagggaattcctgaatagatattttccggaagatgt 15267513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 7358151 - 7358090
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtct 131  Q
    ||||||||||| ||||| || || ||| |||  |||||||||||||| ||||||||||||||    
T  7358151 cagaaggtgcggtttgggacgcacatgttagcggaggaggctgatgactggtgggtgagtct 7358090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 27904265 - 27904213
Alignment:
Q  73 aaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggt 125  Q
    |||||||| |||||||| || ||||| | ||||||||| ||||||||||||||    
T  27904265 aaggtgcgatttggaacgcacatgctggctgaggaggcagatgattggtgggt 27904213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 135; Significance: 2e-70; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 194210 - 194440
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    ||||||||||||||||||||| |||||||||||||||||  || |||||||||| |||| ||||||||| |||||||||| |||||||||||| ||||||    
T  194210 gctcaaagagattgagagagtcttccgtgtgatgcagtgcactgaagtccagaaagtgcattttggaacgcatatgctagctgaggaggctgacgattgg 194309  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||||||||| ||| ||||| ||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  194310 tgggtgagtctactacctaccctagagcaagacggtgttgtggttacctaggctgtgtttaggagggagttcctaaatagatacttttcggaagacgttc 194409  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| | |||| || |||||||||||    
T  194410 gcgggaagaaaaagattgaattccttgagct 194440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 16586 - 16638
Alignment:
Q  199 agatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  16586 agatactttccggaagatgttcgcggaaagaaagagatcgagttccttgagct 16638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 21108 - 21160
Alignment:
Q  199 agatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  21108 agatactttccggaagatgttcgcggaaagaaagagatcgagttccttgagct 21160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 967 - 1204
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| |||||||||||||||||||| |||||| |||||||  |||| ||||||||||||||||| || || |||||||  ||||| ||||     
T  967 agacgtggctcaaggagattgagagagtgttccgcgtgatgtagtgttcagaagttcagaaggtgcgttttggtacgcacatgctagccgaggaagctgg 1066  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||| |||||||||||||||||| ||||||||||||||||||| || |||||||| ||||    
T  1067 tgattggtgggtgagtcttctacctaccttagagcaagatggtgctgtggttacttgggctgtatttaggagggagttcctaagcaaatactttctggaa 1166  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||||||||| |||||||||||    
T  1167 gatgttcgcgggaagaaagagatcgaattccttgagct 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 9916 - 9679
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| ||||||||||| |||||||| ||||||||||||||  | || ||||||||||||||||| || |  ||||||| | |||| |||||    
T  9916 agacgtggctcaaggagattgagagggtgttccgcgtgatgcagtgttcagaggttcagaaggtgcgttttggtacgcgcatgctagcttaggaagctga 9817  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||||||| |||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  9816 tgattggtgtgtgagtcttctacctaccttagagcaagacggtgctgtggttacttgggctgtgtttaggagggagttcctaagcaaatactttccggaa 9717  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||| ||||||||||||||    
T  9716 gatgttcgcgggaagaaggagattgagttccttgagct 9679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 28 - 251
Target Start/End: Original strand, 17326 - 17549
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtga 127  Q
    ||||||||||||||||| || || ||||||||| || | |  |||||||||||||||||||| |||||||||| |||||| |||||||| || |||||||    
T  17326 gagattgagagagtgtttcgagttatgcagtgtactgagggtcagaaggtgcgttttggaacgcatatgctagctgaggaagctgatgactgatgggtga 17425  T
Q  128 gtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaa 227  Q
    |||||||| |||| |||||| ||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||    
T  17426 gtcttctacctactttagagcaagatggtgttgtggttacttgggctgtgtttaggagagagttcctagacagatactttccggaagacgttcgcgggaa 17525  T
Q  228 gagagagatcgagttccttgagct 251  Q
    || |||||||||||||||||||||    
T  17526 gaaagagatcgagttccttgagct 17549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 12933 - 13170
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||  || | || || || ||||||||||||||||| ||||||| |||||| | |||    
T  12933 agacgtggctcaaagagattgagagagtgttccgtgttatgcaatgcactgaggttcataatgtgcgttttggaacacacatgctagatgaggaaggtga 13032  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||| ||||| ||||  |||  || ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  13033 tgattggtgggtgagtcttctacctaccctagagcaagatggtgcagttgttacttgggctgtgtttaggagggagttcctagacagatacttttcggaa 13132  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  13133 gatgttcgcgggaagaaagagattgagttccttgagct 13170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 9464 - 9688
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||| |||||||| ||||| |||||||| ||||| ||  || |||| ||||||||||| ||||| ||| ||  | | | |||||| ||||||||||||    
T  9464 gctcaaggagattgaaagagttttccgtgttatgcaatggactgaagttcagaaggtgcgatttggtacatatcagttggctgaggaagctgatgattgg 9563  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||| | ||||||||| ||||  ||||| | ||  | |   | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  9564 tggattagtcttctacctactctagagcaggatggcgcgattgttacttgggctgtgtttaggagagagttcctaaacagatactttccggaagatgtcc 9663  T
Q  221 gtgggaagagagagatcgagttcct 245  Q
    | ||||||| |||||| || |||||    
T  9664 gcgggaagaaagagattgaattcct 9688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 39932 - 40169
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||| || ||||| |||||| |||||||  | ||| ||||||||||||||||||| |||||||| | |||||| |||||    
T  39932 agacgtggctcaaagagattgagagggttttccgcgtgatggagtgttcagaggtctagaaggtgcgttttggaacgcatatgcttgctgaggaagctga 40031  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||  |||| |||||| ||||  ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  40032 tgattggtggattagtcttctgcctactttagagcaagatggtgttgttgtgacttgggctgtgtttaggagggagttcctaaatagatactttccggaa 40131  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  40132 gatgttcgcgggaagaaagagattgagttccttgagct 40169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 15880 - 15643
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| ||||||||||||||||| || ||||||||||||||  | ||  ||||||| |||||||| || || ||||||| |||||| |||||    
T  15880 agacgtggctcaaggagattgagagagtgtttcgcgtgatgcagtgttcagaggtttagaaggtacgttttggtacgcacatgctagctgaggaagctga 15781  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||| |||||  |||  ||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15780 tgattggtgggtgagtcttctacctaccctagagctagatggtgctgttgtgacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 15681  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| | ||||||| ||||||||| |||||||||||    
T  15680 gatgtttgcgggaagaaagagatcgaattccttgagct 15643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 96 - 251
Target Start/End: Complemental strand, 455 - 300
Alignment:
Q  96 gctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttccta 195  Q
    ||||| |||||| ||||||||||||||||| || |||||  ||| | ||||| ||||| ||| ||| || |||||||||||||||||||| |||||| |     
T  455 gctagctgaggaagctgatgattggtgggttagccttctgcctaacctagagcaagacggtgctgttgtgacttgggctgtgtttaggagagagttcttg 356  T
Q  196 aacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |  |||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  355 agaagatactttccgtaagatgttcgcgggaagaaagagatcgagttccttgagct 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 15145264 - 15145501
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||||||||||| |||||||||||  || |||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  15145264 agacgtggcttaaggagattgagagagtgttccgcgtgatgcagtgcactgaagttcagaaggtgcgttttggaacgcatatgctagctgaggaggctga 15145363  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||||||||   |||||| || |||| || ||  ||||| ||||||| || |||||||||||||||||||  ||||||||||| ||||||||||| |||    
T  15145364 tgattggtggactagtcttttacctacattggaacaagacggtgttgttgtgacttgggctgtgtttaggacagagttcctaaatagatactttcctgaa 15145463  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  15145464 gatgttcgtgggaagaaagagatagagttccttgagct 15145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 11526698 - 11526935
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||  || | || ||||||||||||||||| ||||||||||||| ||| || |||||    
T  11526698 agacgtggctcaaagagattgagagagtgttccgtgttatgcaatgccctgaggttcagaaggtgcgttttggtacacatatgctagctgaagaagctga 11526797  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||||||||||||||||||||  |||| || || ||||  | |  || ||||||| ||||||||||||||| ||||||||| | |||||||||||||||    
T  11526798 tgattggtgggtgagtcttctacataccctatagcaagatggcgcggttgttacttaggctgtgtttaggagagagttcctagatagatactttccggaa 11526897  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| | ||||| | |||| ||||||||||||||    
T  11526898 gatgttcgcgagaagaaatagattgagttccttgagct 11526935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 14043624 - 14043387
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||| ||||||||||| || || ||||||||| |  | || ||||| ||||||||||| || || ||||||| |||||| |||||    
T  14043624 agacgtggctcaaagagatagagagagtgtttcgggttatgcagtgtacagaggttcagaaagtgcgttttggtacgcacatgctagctgaggaagctga 14043525  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||    || || ||||  ||| ||||||||||||||||||||||||||| || |||||| |||||||||||| ||||    
T  14043524 tgattggtggattagtcttctacctgttctaaagcaagatggtgctgtggttacttgggctgtgtttaggagagaattcctagacagatactttctggaa 14043425  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| || |||| |||||| ||||||||||||||    
T  14043424 gatgttcgcggcaagaaagagatagagttccttgagct 14043387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 14353654 - 14353417
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||| ||||||||||| || || ||||||||| |  | || ||||| ||||||||||| || || ||||||| |||||| |||||    
T  14353654 agacgtggctcaaagagatagagagagtgtttcgggttatgcagtgtacagaggttcagaaagtgcgttttggtacgcacatgctagctgaggaagctga 14353555  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||    || || ||||  ||| ||||||||||||||||||||||||||| || |||||| |||||||||||| ||||    
T  14353554 tgattggtggattagtcttctacctgttctaaagcaagatggtgctgtggttacttgggctgtgtttaggagagaattcctagacagatactttctggaa 14353455  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| || |||| |||||| ||||||||||||||    
T  14353454 gatgttcgcggcaagaaagagatagagttccttgagct 14353417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 43 - 251
Target Start/End: Original strand, 17702834 - 17703042
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    |||||||||||||||||  || | ||||||||||| || ||||| || |||  ||||| |||||| ||||||||||||||||| ||||||||| |||||     
T  17702834 ttccgtgtgatgcagtgcactgaggtccagaaggtacgatttggtactcattagctagctgaggaagctgatgattggtgggttagtcttctacctaccc 17702933  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    | ||| ||||  | | | | || ||||||| |||||| ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||||||    
T  17702934 ttgagcaagaaggagctattgtgacttgggttgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagtt 17703033  T
Q  243 ccttgagct 251  Q
    |||||||||    
T  17703034 ccttgagct 17703042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 9592293 - 9592056
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||||||| ||||  |||| |||||||| || || ||||| || |||  ||||| |||||| |||||    
T  9592293 agacgtggcttaaagagattgagaggattttccgtgtgatgtagtgcactaaggtccagaaagtacgatttggtactcatcagctagctgaggaagctga 9592194  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||  ||||  | | ||  || |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  9592193 tgattggtgggttagtctgctacctaaccttgaacaagatggagctgatgtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 9592094  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||||||||| |||||||||||    
T  9592093 gatgttcgcgggaagaaagagatcgaattccttgagct 9592056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 43 - 249
Target Start/End: Original strand, 16725820 - 16726026
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    |||||||||||||||||  || | ||||||||||| || ||||| || |||  ||||| |||||| ||||||||||||||||| ||||||||| |||||     
T  16725820 ttccgtgtgatgcagtgcactgaggtccagaaggtacgatttggtactcattagctagctgaggaagctgatgattggtgggttagtcttctacctaccc 16725919  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    | ||| ||||  | | | | || ||||||| |||||| ||||| |||||||| |  ||||||||||||||||||||||   ||||||  |||||||||||    
T  16725920 ttgagcaagaaggagctattgtgacttgggttgtgttcaggagagagttcctgagaagatactttccggaagatgttcacaggaagaaggagatcgagtt 16726019  T
Q  243 ccttgag 249  Q
    |||||||    
T  16726020 ccttgag 16726026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 12691427 - 12691192
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | || ||||| ||||||||  || |||  ||||| ||||| ||||| || |||  ||| |  ||||| |||||    
T  12691427 agacgtggcttaaagagattgagaggatttttcgtgttatgcagtgcactgaagatcagaaagtgcggtttggtacgcatcagctggcagaggaagctga 12691328  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| |||||  || ||| | | ||| | ||  | ||||| ||||||||||||||||| ||||| |||||||| |  ||||||||| |||||    
T  12691327 tgattggtgggttagtctattacctaacctcgagcatgaaggagttgttgttacttgggctgtgttcaggagagagttcctgagaagatacttttcggaa 12691228  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| ||||||| |||||||||||||||||||    
T  12691227 gatgttcgcgggaagaaagagatcgagttccttgag 12691192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 249
Target Start/End: Complemental strand, 14958433 - 14958199
Alignment:
Q  15 gacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgat 114  Q
    ||||| ||| ||||||||||||||  | |||||||| ||||||||  || |||  ||||| ||||| ||||| || |||  ||| |  ||||| ||||||    
T  14958433 gacgtggcttaaagagattgagaggattttccgtgttatgcagtgcactgaagatcagaaagtgcggtttggtacgcatcagctggcagaggaagctgat 14958334  T
Q  115 gattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaag 214  Q
    ||||||||||| |||||   | ||| | | ||| | ||  | | ||| ||||||||||||||||| ||||| |||||||| |  ||||||||||||||||    
T  14958333 gattggtgggttagtctgtcacctaacctcgagcatgaaggagctgttgttacttgggctgtgttcaggagagagttcctgagaagatactttccggaag 14958234  T
Q  215 atgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||| ||||||| |||||||||||||||||||    
T  14958233 atgttcgcgggaagaaagagatcgagttccttgag 14958199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 11549595 - 11549681
Alignment:
Q  163 gttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  11549595 gttacttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgagttccttgag 11549681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 48810583 - 48810671
Alignment:
Q  163 gttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||| ||||||||||||||||| |||||  | || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  48810583 gttacctgggctgtgtttaggagagagtttatgaatagatactttccggaagatgttcgtgggaagaaagagattgagttccttgagct 48810671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 251
Target Start/End: Complemental strand, 11984887 - 11984684
Alignment:
Q  48 tgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagag 147  Q
    ||||||||||||  || | |||||||| ||||| || || || |||  ||||| |||||||||||||||||||||||| ||||| ||| ||| | | |||    
T  11984887 tgtgatgcagtgcactgaggtccagaaagtgcgattcggtacgcatcagctagctgaggaggctgatgattggtgggttagtctgctacctaaccttgag 11984788  T
Q  148 gaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttg 247  Q
     ||||  | | ||  || ||||||||||| || ||||| |||||||| |  ||||||||| ||||||| ||||| ||||||| ||||||||| |||||||    
T  11984787 caagatggagctgctgtgacttgggctgttttcaggagagagttcctgagaagatacttttcggaagacgttcgcgggaagaaagagatcgaattccttg 11984688  T
Q  248 agct 251  Q
    ||||    
T  11984687 agct 11984684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 15157401 - 15157636
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | ||||| || ||||||||  || |||  ||||||||||| ||||| || |||  |||||  ||||| |||||    
T  15157401 agacgtggcttaaggagattgagaggattttccgggttatgcagtgcactgaagatcagaaggtgcggtttggtactcatcagctagccgaggaagctga 15157500  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| ||||||||   ||||||| ||||| | | | | ||  | | ||| || ||||||||||| |||||||| |||||||| |  |||||||||||||||    
T  15157501 tgactggtgggttgctcttctacctacccttgggcaggagggagctgttgtgacttgggctgtttttaggagagagttcctgagaagatactttccggaa 15157600  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| |||||||  ||||||||||||||||||    
T  15157601 gatgttcgcgggaagaaggagatcgagttccttgag 15157636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 44787847 - 44787932
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  44787847 acttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 44787932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 13689815 - 13689732
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || |||||||||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  13689815 acttgggctgttttcaggagggagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgag 13689732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 18586667 - 18586752
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  18586667 acttgggctgttttgaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 18586752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 15628304 - 15628218
Alignment:
Q  163 gttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||| ||||||||||||||||| |||||| | || ||||||||||||||||||||||| ||||||| | |||| ||||| ||||||    
T  15628304 gttacctgggctgtgtttaggagagagttcatgaatagatactttccggaagatgttcgcgggaagaaaaagattgagtttcttgag 15628218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 10874226 - 10874141
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| || || |||||||||||||| |  ||||||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  10874226 acttgggccgttttcaggagggagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgaattccttgagct 10874141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 11233709 - 11233792
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgag 249  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||| ||||||||||||    
T  11233709 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagattgagttccttgag 11233792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 8711379 - 8711294
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||| |||| |||||||||||    
T  8711379 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagttcgaattccttgagct 8711294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 18181516 - 18181431
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||| ||||| |||||||| |  ||||||||||||||||||||||| |||||||   ||||||| |||||||||||    
T  18181516 acttgggccgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaagtagatcgaattccttgagct 18181431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 14336170 - 14336085
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || | ||| |||||||| |  |||||||||||||| |||||| | ||||||| ||||||||| |||||||||||    
T  14336170 acttgggctgttttcaagagagagttcctgagaagatactttccggaggatgtttgcgggaagaaagagatcgaattccttgagct 14336085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 13005240 - 13005180
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||||||||| |||||||| ||||| || ||||| |||||||||||||||||||| ||||    
T  13005240 tgggctgtgttcaggagggaattcctgaatagatattttccggaagatgttcgtggcaaga 13005180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 15115027 - 15114906
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| || || || || ||||||| | |||| |||||||| |||||| | ||||||||| ||  | ||||| ||||  ||| ||| |||||||    
T  15115027 cagaaggtgcggttcggcacgcacatgctagctcaggaagctgatgactggtggattagtcttctacctgtcctagagcaagatggtgctgttgttactt 15114928  T
Q  170 gggctgtgtttaggagggagtt 191  Q
    ||||||| |||||||| |||||    
T  15114927 gggctgtatttaggagagagtt 15114906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 979 - 749
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||||||||| ||||||||||| ||||||||||||||||   | || ||||||||||||||||| || || ||||||| ||| || |||||| | |||    
T  979 gctcaaagagatagagagagtgtttcgtgtgatgcagtgtttagaggttcagaaggtgcgttttggtacgcacatgctagctgaagaagctgattactgg 880  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||||||||||||| | ||| ||||| || |  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  879 tgggtgagtcttctaccgaccctagagcaaaatggtgttgtggttacttgggctgtgtttaggagagagttcctaaacagatactttccggaagatgttc 780  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| |||||| |||||||| |||||    
T  779 gcgggaagaaagagattgagttcctagagct 749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 5396 - 5166
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||||||||| ||||||||||| ||||||||||||||||   | || ||||||||||||||||| || || ||||||| ||| || |||||| | |||    
T  5396 gctcaaagagatagagagagtgtttcgtgtgatgcagtgtttagaggttcagaaggtgcgttttggtacgcacatgctagctgaagaagctgattactgg 5297  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||||||||||||| | ||| ||||| || |  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5296 tgggtgagtcttctaccgaccctagagcaaaatggtgttgtggttacttgggctgtgtttaggagagagttcctaaacagatactttccggaagatgttc 5197  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| |||||| |||||||| |||||    
T  5196 gcgggaagaaagagattgagttcctagagct 5166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 4504 - 4274
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    ||||||| ||||||||| | |||| || || ||||||||| || | |  |||||||||||||||||||| |||||||||| |||||| |||||||| |||    
T  4504 gctcaaatagattgagataatgtttcgagttatgcagtgtactgagggacagaaggtgcgttttggaacgcatatgctaggtgaggaagctgatgactgg 4405  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||||||||||||| |||| |||||| ||||  ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||    
T  4404 tgggtgagtcttctacctactttagagcaagatggtgttgtggttacttgggctgtgtttaggagagagttcctagatagatactttccggaagacgttc 4305  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| ||||||||||||| |||||||    
T  4304 gcgggaagaaagagatcgagttctttgagct 4274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 16684 - 16914
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||  | || ||||||||||||||||| || || ||||||| |||||| |||||    
T  16684 agacgtggctcaaggagattgagagagtgttccgtgtgatgcagtgttcagaggttcagaaggtgcgttttggtacgcacatgctagctgaggaagctga 16783  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||| |||||||||||||||| ||||| ||||| ||||  ||| | | || |||||||||||||||||||||||||||||||  | |||||||||||||    
T  16784 tgattagtgggtgagtcttctacctaccctagagcaagatggtgctattgtgacttgggctgtgtttaggagggagttcctaagaaaatactttccggaa 16883  T
Q  214 gatgttcgtgggaagagagagatcgagttcc 244  Q
    |||||||| ||||||| ||||||||| ||||    
T  16884 gatgttcgcgggaagaaagagatcgaattcc 16914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 49687 - 49917
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    ||||||||||||||||||||| |||||||||||||||||  |  |||| || ||| |||||||||| ||||||  | | | |||||| ||||||||||||    
T  49687 gctcaaagagattgagagagttttccgtgtgatgcagtgcaccgaagttcaaaagatgcgttttggtacacatcagttggctgaggaagctgatgattgg 49786  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||| | ||||||||| |||| |||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49787 tggattagtcttctacctactttagagcaagacggtgatgtggttacttgggctgtgtttaggagggagttcctaaacaggtactttccggaagatgttc 49886  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| ||||||||  |||||||||||    
T  49887 gcgggaagaaagagatcgtattccttgagct 49917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 43525 - 43444
Alignment:
Q  155 gtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagat 236  Q
    |||||||||| || ||||||||||| ||||| || |||||||| || || |||||||| ||||| || || |||| ||||||    
T  43525 gtgttgtggtgacctgggctgtgttcaggagagaattcctaaataggtattttccggaggatgtccgaggaaagaaagagat 43444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 9192 - 8955
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||| || ||||||||||||||  | ||  |||||||||||||||| || || ||||||| ||| || |||||    
T  9192 agacgtggctcaaagagattgagagagtgtttcgcgtgatgcagtgttcagaggttaagaaggtgcgttttggtacgcacatgctagctgaagaagctga 9093  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||| ||  || |||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  9092 tgattggtgggtgagtcttctacctaccttagagcaagatggtgctgctgtgacttgggctgtgtttaggagagagttcctaaacaggtactttctggaa 8993  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||| ||||    
T  8992 gatgttcgcgggaagaaagagattgagttccttaagct 8955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 21044558 - 21044793
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||||| ||||| || ||||| ||  || |||| ||||||||||||||||| || || ||||||| |||||| |||||    
T  21044558 agacgtggctcaaagagattgagagagttttccgggttatgcaatgcactgaagtgcagaaggtgcgttttggtacgcacatgctagctgaggaagctga 21044657  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||||||| |||||||||||| ||||| ||||| ||||  |||  || |||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  21044658 tgattggtgtgtgagtcttctacctaccctagagcaagatggtgcagttgttacttgggttgtgtttaggagagagttcttaaacagatactttccggaa 21044757  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| ||||||| |||||| ||||||||||||    
T  21044758 gatgttcgagggaagaaagagattgagttccttgag 21044793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 22402457 - 22402310
Alignment:
Q  104 aggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagata 203  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22402457 aggaagctgatgattggtgggtgagtcttctatctaccttagagcaagacggtgttgtggttacttgggctgtgtttaggagagagttcctaaacagata 22402358  T
Q  204 ctttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  22402357 ctttccggaagatgttcgcgggaagaaagagatcgagttccttgagct 22402310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 16380049 - 16379812
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||||| || ||||||||||| ||  || | || ||||||||||| ||||| || |||||||||| |||||||| |||    
T  16380049 agacgtggcttaaagagattgagagagtttttcgtgtgatgcaatgcactgaggttcagaaggtgcgatttggtacgcatatgctagctgaggaggttga 16379950  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||| ||| ||||||||||| ||||  |||  || ||||||||||||||||||||||| ||||||||| ||||||||||||||||     
T  16379949 tgattggtgggtgagtctactacctaccttagagcaagatggtgcagttgttacttgggctgtgtttaggagagagttcctagacagatactttccggag 16379850  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||| |||| ||||||| |||||| ||||||||||||||    
T  16379849 gattttcgcgggaagaaagagattgagttccttgagct 16379812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 22117669 - 22117432
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||| || | || ||||||||||||||||| |  || |||||||||||||| |||||    
T  22117669 agacgtggctcaaagagattgagagagtgttccgtgttatgcaatgtactgaggttcagaaggtgcgttttggtatgcacatgctagttgaggaagctga 22117570  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    || ||||||| |||||| |||| ||||| ||||| ||||  |||| || |||||||||| |||||||||||| ||||||||| | ||||||||||| |||    
T  22117569 tggttggtggttgagtcatctacctaccctagagcaagatggtgtagttgttacttgggttgtgtttaggagagagttcctagatagatactttccagaa 22117470  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  22117469 gatgttcgcgggaagaaagagattgagttccttgagct 22117432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 70 - 251
Target Start/End: Complemental strand, 21752946 - 21752765
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||||||||| || || ||||||| ||| || ||||||||||||||| | ||||||||| |||| |||||| ||||  ||| ||| |||||||    
T  21752946 cagaaggtgcgttttggtacgcacatgctagctgaagaagctgatgattggtggattagtcttctacctactttagagcaagatggtgctgtagttactt 21752847  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  21752846 gggctgtgtttaggagggagttcctaaacagatacttcccggaagatgttcgcgggaagaaagagatcgagttccttgagct 21752765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 20247173 - 20246977
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||| |||||||||||||| || |||||||| ||||||||||||||||| || || ||||||||||||||||| || || ||||||| ||| || |||||    
T  20247173 agacttagctcaaagagatagaaagagtgtttcgtgtgatgcagtgttcaaaggttcagaaggtgcgttttggtacgcacatgctagctgaagaagctga 20247074  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccg 210  Q
    ||| | |||||||||||||||| ||||||||||| ||||| ||| |||||||| |||||||||||||||||| |||||||||||| |||||||||||    
T  20247073 tgactcgtgggtgagtcttctacctaccttagagcaagacggtgatgtggttatttgggctgtgtttaggagagagttcctaaaccgatactttccg 20246977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 251
Target Start/End: Original strand, 20080840 - 20081018
Alignment:
Q  73 aaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttggg 172  Q
    |||||||||||||| ||||||  ||| | |||||| ||||||||||||||| | ||||||||| |||| |||||| ||||| ||||||||||||| || |    
T  20080840 aaggtgcgttttggtacacatcagctggctgaggaagctgatgattggtggattagtcttctacctactttagagcaagacggtgttgtggttacctgag 20080939  T
Q  173 ctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
     |||||||||||| |||||||| | |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  20080940 ttgtgtttaggagagagttcctgagcagatactttccggaagatgttcgcgggaagaaagagattgagttccttgagct 20081018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 17041420 - 17041657
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | |||||||| ||||||||  || | ||||||||||| || ||||| || |||  ||||| |||||| |||||    
T  17041420 agacgtggcttaaggagattgagaggatattccgtgttatgcagtgcactgaggtccagaaggtacgatttggtactcatcagctagctgaggaagctga 17041519  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||| | ||||| | ||| ||||  | | |||||| |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  17041520 tgattggtgggttagtcttcaacctacccttgagcaagaaggagctgtggtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 17041619  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  |||||||| |||||||||||    
T  17041620 gatgttcgcgggaagaaggagatcgaattccttgagct 17041657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 21177322 - 21177085
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||  | |||||||||||| ||||  || | || ||||| ||||| ||||| || |||  ||||| |||||| |||||    
T  21177322 agacgtggcttaaggagatcgagaggattttccgtgtgatgaagtgcactgaggttcagaaagtgcgatttggtacgcatcagctagctgaggaagctga 21177223  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| || |||||| ||||| ||||| ||||  ||||||  || |||||||||||||| ||||| ||||| || |  |||||||||||||||    
T  21177222 tgattggtgggttagccttctacctaccctagagcaagaaggtgttgctgtgacttgggctgtgttaaggagagagttgctgagaagatactttccggaa 21177123  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  21177122 gatgttcgcgggaagaaagagatcgagttccttgagct 21177085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 19110321 - 19110084
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||| ||||||||  || |||  ||||| ||||| ||||| || |||  ||||| |||||| |||||    
T  19110321 agacgtggcttaaagagattgagaggattttccgtgttatgcagtgcactgaagaacagaaagtgcgatttggtactcatcagctagctgaggaagctga 19110222  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| || |||| | ||||| | ||| ||||  | | |||||| ||||||| |||||| ||||| |||||||| |  |||||||||||||||    
T  19110221 tgattggtgggttagccttcaacctacccttgagcaagaaggagctgtggtgacttgggttgtgttcaggagagagttcctgagaagatactttccggaa 19110122  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  |||||||| | |||||||||    
T  19110121 gatgttcgcgggaagaaggagatcgaataccttgagct 19110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 20922401 - 20922163
Alignment:
Q  7 ggagcagagacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgagg 106  Q
    |||||| |||||| |||||| |||||| | ||||| |||||||| ||||| ||  || |||| ||||||||||| ||||| ||||||  | | | |||||    
T  20922401 ggagcacagacgtggctcaaggagattcaaagagttttccgtgttatgcaatgcactgaagttcagaaggtgcgatttggtacacatcagttggctgagg 20922302  T
Q  107 aggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactt 206  Q
    | ||||||||||||||| | ||||||| | ||||  ||||| | ||  | |   | |||||||||| |||||| ||||| ||||||||||||||||||||    
T  20922301 aagctgatgattggtggattagtcttcaacctactctagagcaggatggcgcgattgttacttgggttgtgttaaggagagagttcctaaacagatactt 20922202  T
Q  207 tccggaagatgttcgtgggaagagagagatcgagttcct 245  Q
    ||| ||||||||||| ||||||| |||||| || |||||    
T  20922201 tccagaagatgttcgcgggaagaaagagattgaattcct 20922163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 22435147 - 22435384
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||  | |||||||||||||||||  || | || ||||| ||||||||||| ||||||  ||| | | |||| |||||    
T  22435147 agacgtggcttaaggagatcgagaggattttccgtgtgatgcagtgcactgaggttcagaaagtgcgttttggtacacatcagctggctaaggaagctga 22435246  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||| | ||| | ||||| ||||  ||| ||  || |||||||| ||||| ||||| ||||||||||  |||||||||| ||||    
T  22435247 tgattggtgggttagtcttcgacctaacctagagcaagatggtgctgctgtgacttgggccgtgttcaggagagagttcctaagaagatactttctggaa 22435346  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| | | || || |||||||||||    
T  22435347 gatgttcgagggaagaaataaattgaattccttgagct 22435384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 22459484 - 22459645
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||  |  |||| ||||||||||||||||| ||||||  |||   |||||| |||||    
T  22459484 agacgtggcttaaagagattgagagagttttccatgtgatgcagtgcaccgaagttcagaaggtgcgttttggtacacatcagctgactgaggaagctga 22459583  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctg 175  Q
    |||||||||| | ||||||||| |||| || ||| ||||| ||||||||||| |||| ||||    
T  22459584 tgattggtggattagtcttctacctactttggagcaagacggtgttgtggttccttgagctg 22459645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 22469913 - 22470074
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||  |  |||| ||||||||||||||||| ||||||  |||   |||||| |||||    
T  22469913 agacgtggcttaaagagattgagagagttttccatgtgatgcagtgcaccgaagttcagaaggtgcgttttggtacacatcagctgactgaggaagctga 22470012  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctg 175  Q
    |||||||||| | ||||||||| |||| || ||| ||||| ||||||||||| |||| ||||    
T  22470013 tgattggtggattagtcttctacctactttggagcaagacggtgttgtggttccttgagctg 22470074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 21834102 - 21834017
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  21834102 acttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgagttccttgagct 21834017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 24784416 - 24784499
Alignment:
Q  168 ttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||| ||||| |||||||| |  |||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  24784416 ttgggctgtgttcaggagagagttcctgagaagatactttccgaaagatgttcgtgggaagaaagagatcgagttccttgagct 24784499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 16347153 - 16347238
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  16347153 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 16347238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 16353802 - 16353887
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  16353802 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 16353887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 51330051 - 51330136
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  51330051 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattccttgagct 51330136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 33387588 - 33387673
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||| |||||| ||||    
T  33387588 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgaattcctttagct 33387673  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 41350228 - 41350313
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  41350228 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgaattccttgagct 41350313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 18273598 - 18273519
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||||||||||||||||||  | | ||| ||||||||||||||||| ||||| |||| |||||||||||| |||||    
T  18273598 tgggctgtgtttaggagggagtttttgagcaggtactttccggaagatgtccgtggaaagaaagagatcgagtttcttga 18273519  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 21843164 - 21842929
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | ||||| || ||||||||  || |||  ||||| ||||| ||||| || |||  ||||| |||||| |||||    
T  21843164 agacgtggcttaaggagattgagaggattttccgggttatgcagtgcactgaagatcagaaagtgcggtttggtactcatcagctagctgaggaagctga 21843065  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| ||||||||  |||||||| ||||| | |   ||||  | | ||| || ||||||||||| || ||||| |||||||| |  ||||||||||| |||    
T  21843064 tgactggtgggttggtcttctacctacccttggacaagaaggagctgttgtgacttgggctgttttcaggagagagttcctgagaagatactttccagaa 21842965  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| |||||||  ||||| || |||||||||    
T  21842964 gatgttcgcgggaagaaggagattgaattccttgag 21842929  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 20298313 - 20298252
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtct 131  Q
    ||||||||||| ||||| || || ||| |||  |||||||||||||||||||||||||||||    
T  20298313 cagaaggtgcggtttgggacgcacatgttagcggaggaggctgatgattggtgggtgagtct 20298252  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22401117 - 22401065
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcg 221  Q
    |||||| |||||||||| |||||||| |  |||||||||||||||||||||||    
T  22401117 tgggctttgtttaggagagagttcctgagaagatactttccggaagatgttcg 22401065  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 52989670 - 52989611
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagt 129  Q
    ||||||||||| ||||| || || ||| |||  |||||||||||||||||||||||||||    
T  52989670 cagaaggtgcggtttgggacgcacatgttagcggaggaggctgatgattggtgggtgagt 52989611  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 20853310 - 20853379
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| || ||| |||| || |||||||| ||||| || |||||||||||||||||||| || |||||||    
T  20853310 gtggtgacatggactgtattcaggagggaattcctgaatagatactttccggaagatgtccgagggaaga 20853379  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 24784280 - 24784377
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggt 125  Q
    |||||||||||  | |||||||||||||||||  || | || ||||||||||| || || ||||||  ||||| |||||| |||||||| | ||||||    
T  24784280 gagattgagaggatcttccgtgtgatgcagtgcactgaggttcagaaggtgcgattcggtacacatcagctagctgaggaagctgatgactagtgggt 24784377  T

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Target: scaffold0411 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 9380 - 9143
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||| |||||||||||||||||||  ||||||||||||||  | || |||||||||| |||||| |  |||||||||| |||||| |||||    
T  9380 agacgtggctcaaggagattgagagagtgttcctcgtgatgcagtgttcagaggttcagaaggtgcattttggtatgcatatgctagctgaggaagctga 9281  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| ||||||||||| ||||||||||| ||||  ||| ||||||| ||||| |||||||||||||||||||||||| || |||||||| ||||    
T  9280 tgattggtggctgagtcttctacctaccttagagcaagatggtgatgtggttgcttggactgtgtttaggagggagttcctaagcaaatactttctggaa 9181  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| || |||||| ||||    
T  9180 gatgttcgcgggaagaaagagattgaattcctttagct 9143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 116; Significance: 4e-59; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 5882 - 5647
Alignment:
Q  16 acgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatg 115  Q
    |||| |||||||||||||||||||||||||| ||| ||||| ||  || | || ||||||||||||||||| || || ||||||| |||||| |||||||    
T  5882 acgtggctcaaagagattgagagagtgttccatgttatgcaatgcactgaggttcagaaggtgcgttttggtacgcacatgctagctgaggaagctgatg 5783  T
Q  116 attggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaaga 215  Q
    |||||||||||||||||||| ||| | ||||| ||||  |||  || |||||||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  5782 attggtgggtgagtcttctacctatcctagagcaagatggtgcagttgttacttgggttgtgtttaggagagagttcctagacagatactttccggaaga 5683  T
Q  216 tgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||| | ||||||| |||||| ||||||||||||||    
T  5682 tgtttgcgggaagaaagagattgagttccttgagct 5647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 15391 - 15157
Alignment:
Q  16 acgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatg 115  Q
    |||| ||| ||||||||||||||  | |||||||||||||||||  |  | |||||||| || || ||||| || |||  ||||| |||| | |||||||    
T  15391 acgtggcttaaagagattgagaggattttccgtgtgatgcagtgcaccgaggtccagaaagtacgatttggtactcatcagctagctgagtatgctgatg 15292  T
Q  116 attggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaaga 215  Q
    |||||||||| ||||| ||| ||| | | ||| ||||  | | ||  || ||||||| ||| || ||||| |||||||| |  |||||||||||||||||    
T  15291 attggtgggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggttgttttcaggagagagttcctgagaagatactttccggaaga 15192  T
Q  216 tgttcgtgggaagagagagatcgagttccttgagc 250  Q
    |||||||||||||| ||||||||||||||||||||    
T  15191 tgttcgtgggaagaaagagatcgagttccttgagc 15157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 22155 - 22040
Alignment:
Q  16 acgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatg 115  Q
    |||| ||| ||||||||||||||  | |||||||||||||||||  |  | |||||||| || || ||||| || |||  ||||| |||| | |||||||    
T  22155 acgtggcttaaagagattgagaggattttccgtgtgatgcagtgcaccgaggtccagaaagtacgatttggtactcatcagctagctgagaaagctgatg 22056  T
Q  116 attggtgggtgagtct 131  Q
    |||||||||| |||||    
T  22055 attggtgggttagtct 22040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 180333 - 180389
Alignment:
Q  173 ctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||||| ||||| || ||||| || |||||||||||||||||||| || |||||||    
T  180333 ctgtgttcaggagagaattcctgaatagatactttccggaagatgtccgagggaaga 180389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 11735 - 11498
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||| | |||||||||  | || ||||||||  |||| |  |||||||||| ||||||||| || |||||||||||||| ||||     
T  11735 agacgtggctcaaagagatagggagagtgtttagagttatgcagtgcactaaggctcagaaggtgcattttggaacgcacatgctagttgaggaagctgg 11636  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||| ||| |||||||||||  |||||||| |||||||||||||||||    
T  11635 tgattggtgggtgagtcttctacctaccttagagcaagatggtgttgtggttacttaggcagtgtttaggagaaagttcctagacagatactttccggaa 11536  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||  ||||||| |||||| ||||||||| ||||    
T  11535 gatgttcacgggaagaaagagatagagttcctttagct 11498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 31256 - 31019
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||||| |||||||||||||||||  || | || ||||||||||||||||| ||||||  | | | |||||| |||||    
T  31256 agacgtggcttaaggagatcgagagagttttccgtgtgatgcagtgcactgaggttcagaaggtgcgttttggtacacatcagttggctgaggaagctga 31157  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| |||||| | ||| ||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  31156 tgattggtggattagtcttctacctactttagagcaggacagtgctgtggttacttgggctgtgtttaggagggagatcctaagcagatactttccggaa 31057  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||  |||||| |||||| ||||||||||||||    
T  31056 gatgttcgcaggaagaaagagattgagttccttgagct 31019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 6337 - 6574
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||| ||||| |||||||| ||||| ||  || |||| ||||||||||| ||||| ||| ||  | | | |||||| |||||    
T  6337 agacgtggcttaaagagattgaaagagttttccgtgttatgcaatgcactgaagttcagaaggtgcgatttggtacatatcagttggctgaggaagctga 6436  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||||| ||||| ||||| ||||  ||| ||| || |||||||||||||||||||||||||||||||||||||| |||||||||    
T  6437 tgattggtgggttagtcttctacctaccctagagcaagatggtgctgttgtgacttgggctgtgtttaggagggagttcctaaacagataatttccggaa 6536  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| | |||||||||||||||||||    
T  6537 gatgttcgcgggaagaaaaagatcgagttccttgagct 6574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 70 - 251
Target Start/End: Complemental strand, 10532 - 10351
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    |||||||||||||||||||| |||||||||| | |||| |||||||| || |||||| |||||||| |||| |||||| ||||  |||||||||||||||    
T  10532 cagaaggtgcgttttggaacgcatatgctagctaaggaagctgatgactgatgggtgtgtcttctacctactttagagcaagatggtgttgtggttactt 10433  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||| |||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  10432 gggttgtgtttaggagagagttcctagacagatactttccggaagacgttcgcgggaagaaagagatcgagttccttgagct 10351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 1000 - 763
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||||| |||||||||||||||||  |  |||| ||||||||||||||||| || |||  | | | |||||| |||||    
T  1000 agacgtggcttaaggagattgagagagttttccgtgtgatgcagtgcaccgaagttcagaaggtgcgttttggtactcatcagttggctgaggaagctga 901  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| || ||| ||||| ||| ||| || |||||||||||||||||||||||||||||||||||||||||||| |||    
T  900 tgattggtggattagtcttctacctactttggagcaagacggtgctgttgtgacttgggctgtgtttaggagggagttcctaaacagatactttccagaa 801  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| |||||||| |||||    
T  800 gatgttcgcgggaagaaagagatagagttcctggagct 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 34107 - 34344
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||| |||||||||| |||||||||||||||||  |  |||| ||||||||||||||||| ||||||  ||| | |||||| |||||    
T  34107 agacgtggcttaaggaggttgagagagttttccgtgtgatgcagtgcaccgaagtacagaaggtgcgttttggtacacatcagctggctgaggaagctga 34206  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| || ||| ||||| ||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||| |||    
T  34207 tgattggtggattagtcttctacctactttggagcaagacggtgctgtggttacttgggctgtgtttaggagggcgttcataaacatatactttccagaa 34306  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
     ||||||| ||||||| |||||| ||||||||||||||    
T  34307 tatgttcgcgggaagaaagagattgagttccttgagct 34344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 42594 - 42364
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||||||||| |||||||||||||| || |||||||||||  | || ||||| |||| |||||| || || ||||||| |||||| ||||||||||||    
T  42594 gctcaaagagatagagagagtgttccgggtcatgcagtgttcagaggttcagaaagtgcattttggtacgcacatgctagctgaggaagctgatgattgg 42495  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||| | || |||||| ||   || ||| ||||  ||| ||| |||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  42494 tggattagccttctacctgttttggagcaagatggtgctgttgttacttgggctgtgtttgggagagagttcctagacagatactttccggaagatgttc 42395  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| |||||||||||||||||||||    
T  42394 gcgggaagaaagagatcgagttccttgagct 42364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 76314 - 76084
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||||||||| |||||||||||||| || |||||||||||  | || ||||| |||| |||||| || || ||||||| |||||| ||||||||||||    
T  76314 gctcaaagagatagagagagtgttccgggtcatgcagtgttcagaggttcagaaagtgcattttggtacgcacatgctagctgaggaagctgatgattgg 76215  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||| | || |||||| ||   || ||| ||||  ||| ||| |||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  76214 tggattagccttctacctgttttggagcaagatggtgctgttgttacttgggctgtgtttgggagagagttcctagacagatactttccggaagatgttc 76115  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| |||||||||||||||||||||    
T  76114 gcgggaagaaagagatcgagttccttgagct 76084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 208 - 1
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||| ||||||||||| |||||||||||||||||  |  |||| ||||||||||||||||| || |||  ||| | |||||| |||||    
T  208 agacgtggcttaaagatattgagagagttttccgtgtgatgcagtgcaccgaagttcagaaggtgcgttttggtactcatcagctggctgaggaagctga 109  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| |||| |||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  108 tgattggtggattagtcttctacctactttagagcaagacggtgctgtggttacttgggctgtgtttaggagggagtttctaaatagatactttccggaa 9  T
Q  214 gatgttcg 221  Q
    ||||||||    
T  8 gatgttcg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 11800 - 11953
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggt 164  Q
    |||| ||||||||||| ||||| || || ||| |||||||||| ||||||||||||||||| |||||  || |||   | ||  | ||  ||| ||||||    
T  11800 aagtgcagaaggtgcggtttgggacgcacatgttagttgaggaagctgatgattggtgggtaagtctgttacctatgcttgaacaggatggtgctgtggt 11899  T
Q  165 tacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
     || ||||||||||| |||||||| ||||| || || || ||||||||||||||    
T  11900 gacctgggctgtgttcaggagggaattcctgaataggtattttccggaagatgt 11953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 19980 - 20133
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggt 164  Q
    |||| ||||||||||| ||||| || || ||| |||||||||| ||||||||||||||||| |||||  || |||   | ||  | ||  ||| ||||||    
T  19980 aagtgcagaaggtgcggtttgggacgcacatgttagttgaggaagctgatgattggtgggtaagtctgttacctatgcttgaacaggatggtgctgtggt 20079  T
Q  165 tacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
     || ||||||||||| |||||||| ||||| || || || ||||||||||||||    
T  20080 gacctgggctgtgttcaggagggaattcctgaataggtattttccggaagatgt 20133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 1348 - 1584
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||| |||||||||||||| || || ||||||||| || | || ||||||||||||||||| || || |||||||||||| | |||||    
T  1348 agacgtggctcaaagaaattgagagagtgtttcgggttatgcagtgtactgaggttcagaaggtgcgttttggtacgcacatgctagttgagaaagctga 1447  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||||  ||||| | ||  ||||||| ||||||||||||||||||||||| |||||| | | | ||||||||||||||    
T  1448 tgattggtggattagtcttctacctactctagagcaggatggtgttgttgttacttgggctgtgtttaggagagagttcat-agccgatactttccggaa 1546  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  1547 gatgttcgcgggaagaaagagattgagttccttgagct 1584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 4212 - 4448
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||| |||||||||||||| || || ||||||||| || | || ||||||||||||||||| || || |||||||||||| | |||||    
T  4212 agacgtggctcaaagaaattgagagagtgtttcgggttatgcagtgtactgaggttcagaaggtgcgttttggtacgcacatgctagttgagaaagctga 4311  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||||  ||||| | ||  ||||||| ||||||||||||||||||||||| |||||| | | | ||||||||||||||    
T  4312 tgattggtggattagtcttctacctactctagagcaggatggtgttgttgttacttgggctgtgtttaggagagagttcat-agccgatactttccggaa 4410  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  4411 gatgttcgcgggaagaaagagattgagttccttgagct 4448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 16379 - 16144
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||| ||| ||||| ||  |  | || ||||||||||||||||| || || ||||||| |||||| || ||    
T  16379 agacgtggctcaaagagattgagagagtgttccatgttatgcaatgcaccgaggttcagaaggtgcgttttggtacgcacatgctagctgaggaagccga 16280  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||||||||||||| ||||  ||||| ||||  |||  || ||||||||||||||||||||||| ||||||||| | |||||||||||| ||    
T  16279 tgattggtgggtgagtcttctacctactctagagcaagatggtgcagttgttacttgggctgtgtttaggagagagttcctagagagatactttccgaaa 16180  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| ||||||| |||||| ||||| ||||||    
T  16179 gatgttcgagggaagaaagagattgagtttcttgag 16144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 9306 - 9190
Alignment:
Q  7 ggagcagagacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgagg 106  Q
    |||||| |||||| |||||| |||||||| ||||| |||||||| ||||| ||  || |||| |||||||| || ||||| ||||||  | | | |||||    
T  9306 ggagcacagacgtggctcaaggagattgaaagagttttccgtgttatgcaatgcactgaagttcagaaggtacgatttggtacacatcagttggctgagg 9207  T
Q  107 aggctgatgattggtgg 123  Q
    | |||||||||||||||    
T  9206 aagctgatgattggtgg 9190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 3903 - 4121
Alignment:
Q  27 agagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtg 126  Q
    ||||| |||||||||||| |||||||||||||||||  | || ||||||||||||||||| |  || ||||||| ||| || |||||||| |||||||||    
T  3903 agagagtgagagagtgtttcgtgtgatgcagtgttcagaggtacagaaggtgcgttttggtatgcacatgctagctgaagaagctgatgactggtgggtg 4002  T
Q  127 agtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtggga 226  Q
    ||||||||| ||||| || || || |  |||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| | | ||    
T  4003 agtcttctacctaccctatagcaaaatggtgttgtggttacttgggctgtgtttagaagagagttcctaaagagatactttccggaagatgtttgcgaga 4102  T
Q  227 agagagagatcgagttcct 245  Q
    ||| |||||| ||||||||    
T  4103 agaaagagattgagttcct 4121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 102; Significance: 9e-51; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 29909 - 30146
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||||| |||||||||||||| ||  || | || ||||||||||| ||||| ||||||  ||| | |||||| |||||    
T  29909 agacgtggcttaaggagatcgagagagttttccgtgtgatgcattgcactgatgttcagaaggtgcgatttggtacacatcagctggctgaggaagctga 30008  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||| ||||| ||||| ||||| ||||  ||| ||  || ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30009 tgattggtgggttagttttctacctaccctagagcaagatggtgctgctgtgacttgggctgtgtttaggagggagttcctaagcagatactttccggaa 30108  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||| |||| ||||||| |||||| ||||||||||||||    
T  30109 gattttcgcgggaagaaagagattgagttccttgagct 30146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 251
Target Start/End: Original strand, 42868 - 43025
Alignment:
Q  94 atgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcc 193  Q
    ||||||| ||| || |||||||| |||||||||||||||||| |||| ||||||  | |  ||||||||||||||||||||||||||||||| |||||||    
T  42868 atgctagctgaagaagctgatgactggtgggtgagtcttctacctactttagagctaaatggtgttgtggttacttgggctgtgtttaggagagagttcc 42967  T
Q  194 taaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||||||||||||||| | ||||| |||||| |||||||| |||||    
T  42968 taaacagatactttccggaagatgttcgcgagaagaaagagattgagttcctagagct 43025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 41353 - 41418
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttgg 86  Q
    |||||||||||| ||||||||||| |||||||||||||||||  | || |||||||||||||||||    
T  41353 gctcaaagagatagagagagtgtttcgtgtgatgcagtgttcagatgttcagaaggtgcgttttgg 41418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 13607 - 13837
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||||||||||||||||| ||||||||| ||||| ||  || |  | ||||||||||||||||  || || ||||||| |||||| ||||||||||||    
T  13607 gctcaaagagattgagagagcgttccgtgttatgcaatgcactgagattcagaaggtgcgttttgttacgcacatgctagctgaggaagctgatgattgg 13706  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||||||||||||| ||||| ||||| ||||  | |  |  ||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||    
T  13707 tgggtgagtcttctacctaccctagagcaagatggcgcagctgttacttgggctgtgtttaggagagagttcctagacatatactttccgaaagatgttc 13806  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
      ||||||| |||||| ||||||||||||||    
T  13807 acgggaagaaagagattgagttccttgagct 13837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 4513 - 4283
Alignment:
Q  21 gctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattgg 120  Q
    |||||||||||| |||||||| || | |||||||||||||||  | || ||||||||||||||| | || || ||||||| ||| || |||||||| |||    
T  4513 gctcaaagagatagagagagtttttcatgtgatgcagtgttcagaggttcagaaggtgcgttttagtacccacatgctagctgaagaagctgatgactgg 4414  T
Q  121 tgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttc 220  Q
    ||||||||||||||| ||||| | ||| || |  || ||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| |||||     
T  4413 tgggtgagtcttctacctacccttgagcaaaatggtattgtggttacttgggttgtgtttaggagagagttcctaaacagatactttccagaatatgttt 4314  T
Q  221 gtgggaagagagagatcgagttccttgagct 251  Q
    | ||||||| |||||| |||||||| |||||    
T  4313 gcgggaagaaagagattgagttcctagagct 4283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 15858 - 16095
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||| ||||||||||| |  || |||||||| ||  | || |||||||||||||| || || || ||||||| |||||| |||||    
T  15858 agacgtggctcaaagagatagagagagtgtttcaggttatgcagtgatcagaggttcagaaggtgcgtttcggtacgcacatgctagctgaggaagctga 15957  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||    ||||| ||||  ||||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||    
T  15958 tgattggtggatcagtcttctacctgttctagagcaagatggtgttgttgtgacttgggctgtgtttaggagagagttcctaaacagatactttcctgaa 16057  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| || |||| |||||| ||||||||||||||    
T  16058 gatgttcgcggaaagaaagagattgagttccttgagct 16095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 22868 - 23105
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||| |||||||||||||||| || || ||||| ||  || | ||  | |||||||||||||| || || ||||||| |||||| |||||    
T  22868 agacgtggctcaaatagattgagagagtgtttcgggttatgcaatgcactgaggttgaaaaggtgcgttttggtacgcacatgctagctgaggaagctga 22967  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||| |||||||||||||||| ||| | ||||| ||||  |||  ||  ||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  22968 tgattagtgggtgagtcttctacctatcctagagcaagatggtgcagtttttacttgggttgtgtttaggagagagttcctagacagatactttccggaa 23067  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  23068 gatgttcgcgggaagaaagagattgagttccttgagct 23105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 36724 - 36808
Alignment:
Q  49 gtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttc 133  Q
    |||||||||||  || | ||||||||||| || ||||| || |||  ||||| |||||| ||||||||||||||||| |||||||    
T  36724 gtgatgcagtgcactgaggtccagaaggtacgatttggtactcatcagctagctgaggaagctgatgattggtgggttagtcttc 36808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 585 - 349
Alignment:
Q  15 gacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgat 114  Q
    ||||| ||||||||||||||||||||| ||||| || ||||| ||  || | || ||||||||||||||||| || || ||||||| ||| || ||||||    
T  585 gacgtggctcaaagagattgagagagttttccgggttatgcaatgcactgaggtacagaaggtgcgttttggtacgcacatgctagctgaagaagctgat 486  T
Q  115 gattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaag 214  Q
    ||||||||||||||| ||||| ||| | ||||| ||||  |||  || ||||| ||||||||||||||||| || |||||| ||||||||||||| ||||    
T  485 gattggtgggtgagtattctacctatcctagagcaagatggtgcagttgttacatgggctgtgtttaggagagaattcctagacagatactttcctgaag 386  T
Q  215 atgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||| | ||||||| |||||| ||||||||||||||    
T  385 atgtttgcgggaagaaagagattgagttccttgagct 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 251
Target Start/End: Complemental strand, 22559 - 22336
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtga 127  Q
    ||||| |||||||| |||||||| ||||| ||  || |||| ||||||||||| ||||| | ||||  ||| | |||||| ||||||||||||||||| |    
T  22559 gagatcgagagagttttccgtgttatgcaatgcactgaagttcagaaggtgcgatttggtatacatcagctggctgaggaagctgatgattggtgggtta 22460  T
Q  128 gtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaa 227  Q
    |||||||| ||||| ||||| ||||  ||| ||  || ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||| |||||    
T  22459 gtcttctacctaccctagagcaagatggtgctgctgtgacttgggctgtgtttaggagggatttcctaagtagatactttccggaagatgttcgcgggaa 22360  T
Q  228 gagagagatcgagttccttgagct 251  Q
    || |||||| ||||||||||||||    
T  22359 gaaagagattgagttccttgagct 22336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 251
Target Start/End: Complemental strand, 37983 - 37760
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtga 127  Q
    ||||| |||||||| |||||||| ||||| ||  || |||| ||||||||||| ||||| | ||||  ||| | |||||| ||||||||||||||||| |    
T  37983 gagatcgagagagttttccgtgttatgcaatgcactgaagttcagaaggtgcgatttggtatacatcagctggctgaggaagctgatgattggtgggtta 37884  T
Q  128 gtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaa 227  Q
    |||||||| ||||| ||||| ||||  ||| ||  || ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||| |||||    
T  37883 gtcttctacctaccctagagcaagatggtgctgctgtgacttgggctgtgtttaggagggatttcctaagtagatactttccggaagatgttcgcgggaa 37784  T
Q  228 gagagagatcgagttccttgagct 251  Q
    || |||||| ||||||||||||||    
T  37783 gaaagagattgagttccttgagct 37760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 251
Target Start/End: Complemental strand, 55595 - 55369
Alignment:
Q  25 aaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtggg 124  Q
    ||||||||||| ||||| |||||||| ||||| ||  || |||| |||||||| || ||||| ||||||  | ||| |||||| ||||||||||||||||    
T  55595 aaagagattgaaagagttttccgtgttatgcaatgcactgaagttcagaaggtacgatttggtacacatcagttagctgaggaagctgatgattggtggg 55496  T
Q  125 tgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgg 224  Q
    | ||||||||| ||||| ||||| ||||  ||| ||  || ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||    
T  55495 ttagtcttctacctaccctagagcaagatggtgatgctgtgacttgggctgtgtttaggagggagttcctaagcagatactttccagaagatgttcgcgg 55396  T
Q  225 gaagagagagatcgagttccttgagct 251  Q
    ||||| | |||  ||||||||||||||    
T  55395 gaagaaatagaatgagttccttgagct 55369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 28 - 251
Target Start/End: Complemental strand, 32834 - 32611
Alignment:
Q  28 gagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtga 127  Q
    ||||| |||||||| |||| ||||||||||||  || |||| ||||||||||| ||||| ||||||  ||| | |||||| |||||||||| |||||| |    
T  32834 gagatcgagagagttttccatgtgatgcagtgcactgaagttcagaaggtgcgatttggtacacatcagcttgctgaggaagctgatgattagtgggtta 32735  T
Q  128 gtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaa 227  Q
    |||| ||| ||||| ||||| ||||  ||| ||| || |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||    
T  32734 gtctcctacctaccctagagcaagatggtgctgttgtgacttgggctgtgtttaggagagagttcctaagaagatactttccggaagatgttcgcgggaa 32635  T
Q  228 gagagagatcgagttccttgagct 251  Q
    || |||  | ||||||||||||||    
T  32634 gaaagaagttgagttccttgagct 32611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 251
Target Start/End: Original strand, 36148 - 36392
Alignment:
Q  7 ggagcagagacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgagg 106  Q
    ||||| ||||||| ||| || ||||| |||||||| |||| ||| ||||| ||  || |||  ||||||||||| ||||| ||||||  ||| | |||||    
T  36148 ggagccgagacgtggcttaaggagatcgagagagttttccatgttatgcaatgcactgaagatcagaaggtgcgatttggtacacatcagctggctgagg 36247  T
Q  107 aggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactt 206  Q
    | ||||||||||||||||| ||||||||| ||||| ||||| ||||  ||| ||  || ||||||||||||||||||||||||||||||| |||||||||    
T  36248 aagctgatgattggtgggttagtcttctacctaccctagagcaagatggtgctgctgtgacttgggctgtgtttaggagggagttcctaagcagatactt 36347  T
Q  207 tccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    || |||||||||||  |||||||  ||||| ||||||||||||||    
T  36348 tctggaagatgttcacgggaagaaggagattgagttccttgagct 36392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 27321 - 27084
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||||||||||||||| ||| ||| | ||  | || ||||| |||  |||||| ||||| ||||| ||| | || || ||| |||  |||||  ||||    
T  27321 agacgtagctcaaagagaatgaaagaattttatgggtcatgcaatgtaataaagttcagaaagtgcgctttagtacgcacatgttagcagaggaaactga 27222  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||||||| || ||| ||| | ||| ||||||| | |   |||  || ||||| || |||||||||||||| |||||||| ||||||||||||||||||    
T  27221 tgattggtgagttagtattcaacctatcttagagcacggaggtggagttgttacctgagctgtgtttaggagagagttcctgaacagatactttccggaa 27122  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||| ||||||||    
T  27121 gatgttcgcgggaagaaagagattgagtttcttgagct 27084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 56990 - 57227
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||| ||| ||||| ||  || | || ||||||||||||||||| |  |||||||||| | |||| | |||    
T  56990 agacgtggctcaaagagattgagagagtgttccatgttatgcaatgcactgaggttcagaaggtgcgttttggtatgcatatgctagcttaggaagatga 57089  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||| | ||||||||| ||| | ||||| ||||  |||  || |||||| ||| | |||||||||| ||||||||| |||| ||||||||||||    
T  57090 tgattggtggattagtcttctacctatcctagagcaagatggtgcagttgttactggggttttgtttaggagagagttcctagacaggtactttccggaa 57189  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||| | |||||| |||||| ||||||||||||||    
T  57190 gatgttcataggaagaaagagattgagttccttgagct 57227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 1071 - 835
Alignment:
Q  15 gacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgat 114  Q
    ||||| ||| || |||||||||||||| || ||||||||||||||  |  |||| ||||||||||  ||||| ||||||  | | | |||||| ||||||    
T  1071 gacgtggcttaaggagattgagagagtttttcgtgtgatgcagtgcaccgaagttcagaaggtgcaatttggtacacatcagttggctgaggaagctgat 972  T
Q  115 gattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaag 214  Q
    ||||||||||| ||||||||| ||||| ||||  ||||  |||||||  | || |||||| ||||||||||||||||||||| |||||||||||||||||    
T  971 gattggtgggttagtcttctacctaccctagatcaagatggtgttgttatgacatgggctttgtttaggagggagttcctaagcagatactttccggaag 872  T
Q  215 atgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||| ||||||| ||| || ||||| ||||||||    
T  871 atgttcgcgggaagaaagaaattgagttacttgagct 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 251
Target Start/End: Complemental strand, 7786 - 7605
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||||||||| || || ||||||| |||||| | ||||||||||||| | ||||||||| ||| | ||||| ||||  |||  || |||||||    
T  7786 cagaaggtgcgttttggtacgcacatgctagctgaggaagttgatgattggtggattagtcttctacctatcctagagcaagatggtgcagttgttactt 7687  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||| |||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  7686 gggttgtgtttaggagagagttcctagacaggtactttccggaagatgttcgtaggaagaaagagattgagttccttgagct 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 251
Target Start/End: Complemental strand, 14916 - 14735
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||||||||| || || ||||||| |||||| | ||||||||||||| | ||||||||| ||| | ||||| ||||  |||  || |||||||    
T  14916 cagaaggtgcgttttggtacgcacatgctagctgaggaagttgatgattggtggattagtcttctacctatcctagagcaagatggtgcagttgttactt 14817  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||| |||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  14816 gggttgtgtttaggagagagttcctagacaggtactttccggaagatgttcgtaggaagaaagagattgagttccttgagct 14735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 7114 - 7351
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | |||||||||||||||||  || | ||||||||||| || ||||| || |||  ||||| |||||| |||||    
T  7114 agacgtggcttaaggagattgagaggatattccgtgtgatgcagtgcactgaggtccagaaggtacgatttggtactcatcagctagctgaggaagctga 7213  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||||| ||||  | ||| ||||  | | |||||| |||||||||||||| ||||| |||||||| |  ||||||||||| |||    
T  7214 tgattggtgggttagtcttctacctacgcttgagcaagaaggagctgtggtgacttgggctgtgttcaggagagagttccttagaagatactttccagaa 7313  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||||||||||||||||||    
T  7314 gatgttcgcgggaagaaggagatcgagttccttgagct 7351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 251
Target Start/End: Original strand, 215811 - 215992
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    |||||||| |||||||| |  || ||||||| |||||| ||||||||||||||||||| ||||||| ||||| || || ||||| |||  |  |||||||    
T  215811 cagaaggttcgttttggtatgcacatgctagctgaggaagctgatgattggtgggtgaatcttctacctaccctatagcaagacggtgcagctgttactt 215910  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||||||| ||||||| |||| | ||||||||||||||    
T  215911 gggctgtgtttaggagagagttcctagatagatactttccggaagatgttcgcgggaagaaagagtttgagttccttgagct 215992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 251
Target Start/End: Complemental strand, 18821 - 18577
Alignment:
Q  7 ggagcagagacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgagg 106  Q
    |||||| |||||| ||||||||||||||||||||| ||||  || || || ||   | | || ||||||||||||||||| || || |||||||  ||||    
T  18821 ggagcacagacgtggctcaaagagattgagagagttttcctggttatccaatgcaatgaggtgcagaaggtgcgttttggtacgcacatgctagccgagg 18722  T
Q  107 aggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactt 206  Q
    ||||||||||||||||||||||| ||||| ||| | ||||| ||||  |||  || ||||||||| ||||||||||||| ||||||||| | ||||| ||    
T  18721 aggctgatgattggtgggtgagtattctacctatcctagagcaagatagtgcagttgttacttggactgtgtttaggagagagttcctagatagataatt 18622  T
Q  207 tccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||| || |||||||| ||||||| |||||| ||||| ||||||||    
T  18621 tccagaggatgttcgcgggaagaaagagattgagtttcttgagct 18577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 251
Target Start/End: Original strand, 110299 - 110479
Alignment:
Q  71 agaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttg 170  Q
    |||| ||||||||| | || || |||||||||||||| | |||||||||||||   ||||||||| ||    ||||| ||||  ||||||| ||||||||    
T  110299 agaaagtgcgttttcgtacgcacatgctagttgaggaagttgatgattggtggactagtcttctacctgtactagagcaagatggtgttgttgttacttg 110398  T
Q  171 ggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||| || ||| || |||||||||||||||||||||| || ||||||| ||||||||| |||||||||||    
T  110399 ggctgtgtttaggagagaattcttagacagatactttccggaagatgtccgcgggaagaaagagatcgaattccttgagct 110479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 6992 - 7229
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| || ||||| ||| |||| ||||| ||  || |||| ||||||||||| ||||| ||||||  ||| | |||||| |||||    
T  6992 agacgtggcttaaggagatcgaaagagttttctgtgttatgcaatgcactgaagttcagaaggtgcgatttggtacacatcagctggctgaggaagctga 7091  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||| || ||| |||  |||| ||||| ||||| ||||  ||| ||  || || |||||||||||||||||||||||||||| ||||||||||||||||    
T  7092 tgattagtaggttagtaatctacctaccctagagcaagatggtgctgctgtgacatgggctgtgtttaggagggagttcctaagcagatactttccggaa 7191  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  7192 gatgttcgcgggaagaaagagattgagttccttgagct 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 11759 - 11996
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| |||||||| || ||||| ||| |||| ||||| ||  || |||| ||||||||||| ||||| ||| ||  | | | |||||| |||||    
T  11759 agacgtggcttaaagagatagaaagagttttcagtgttatgcaatgcactgaagttcagaaggtgcgatttggtacaaatcagatggctgaggaagctga 11858  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||||| || ||| |||  |||| ||||| ||||| ||||  ||| ||  || || |||||||||||||||||||||||||||| ||||||||||||||||    
T  11859 tgattagtaggttagtaatctacctaccctagagcaagatggtgctgctgtgacctgggctgtgtttaggagggagttcctaagcagatactttccggaa 11958  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  11959 gatgttcgcgggaagaaagagattgagttccttgagct 11996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 65865 - 66102
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||  ||||||| ||||| |||||||||||  |||| || ||||| ||||| ||||  ||||||  ||| | |||||| | |||    
T  65865 agacgtggcttaaggagatcaagagagttttccgagtgatgcagtgcactaaggttcagaaagtgcgatttgatacacatcagctggctgaggaagttga 65964  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||||| ||||| ||||| ||||  ||| ||  || |||||||||||||||||||| ||||||||||  |||||||||| ||||    
T  65965 tgattggtgggttagtcttctacctaccctagagcaagatggtgctgctgtgacttgggctgtgtttaggagagagttcctaagaagatactttctggaa 66064  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||| || ||||||||||||||    
T  66065 gatgttcgcgggaagaaagaaattgagttccttgagct 66102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 9183 - 8946
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||||| ||||| ||||||||||   || |||  ||||||||||| ||||| ||||||  | | |  ||||| | |||    
T  9183 agacgtggcttaaggagattgagagagttttccgcgtgatgcagtacactgaagatcagaaggtgcgatttggtacacatcagttggccgaggaaggtga 9084  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||||| ||||| || || ||||  ||| ||  || ||||||||||||||||||||||||||||||| ||||||||| || |||    
T  9083 tgattggtgggttagtcttctacctaccctaaagcaagatggtgctgctgtgacttgggctgtgtttaggagggagttcctaagcagatacttccctgaa 8984  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||| || ||||||||||||||    
T  8983 gatgttcgcgggaagaaagaaattgagttccttgagct 8946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 107264 - 107349
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||| | |  ||||||||||||||||||||||| ||||| |  |||||||| |||||||||||    
T  107264 acttgggctgtgttcaggagagagttcttgagaagatactttccggaagatgttcgcgggaaaaaggagatcgaattccttgagct 107349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 93388 - 93444
Alignment:
Q  173 ctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||||| ||||| || ||||| || |||||||||||||||||||| || |||||||    
T  93388 ctgtgttcaggagagaattcctgaatagatactttccggaagatgtccgagggaaga 93444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 251
Target Start/End: Complemental strand, 819 - 611
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    |||| ||||||||||||  |||| ||||||||||| || ||||| || |||  ||||| |||||| ||||||||||||||||| ||||||||| |||||     
T  819 ttccatgtgatgcagtgcactaaggtccagaaggtacgatttggtactcatcagctagctgaggaagctgatgattggtgggttagtcttctacctaccc 720  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    | ||| ||||  | | |||  | |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||||||    
T  719 ttgagcaagaaggagctgttttgacttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagtt 620  T
Q  243 ccttgagct 251  Q
    |||||||||    
T  619 ccttgagct 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 251
Target Start/End: Original strand, 12488 - 12696
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    |||| ||||||||||||  |||| ||||||||||| || ||||| || |||  ||||| |||||| ||||||||||||||||| ||||||||| |||||     
T  12488 ttccatgtgatgcagtgcactaaggtccagaaggtacgatttggtactcatcagctagctgaggaagctgatgattggtgggttagtcttctacctaccc 12587  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    | ||| ||||  | | |||  | |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||||||    
T  12588 ttgagcaagaaggagctgttttgacttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagtt 12687  T
Q  243 ccttgagct 251  Q
    |||||||||    
T  12688 ccttgagct 12696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 251
Target Start/End: Complemental strand, 42039 - 41884
Alignment:
Q  96 gctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttccta 195  Q
    ||||| || ||| |||||||| |||||||| || |||||| ||||| | | | ||||  | | ||| || || ||||||||||| ||||| ||||||||     
T  42039 gctagctgtggaagctgatgactggtgggttagccttctacctacccttgggcaagaaggagctgttgtgacctgggctgtgttcaggagagagttcctg 41940  T
Q  196 aacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |  ||||||||||| ||||||||||| || ||||  |||||| | |||||||||||    
T  41939 agaagatactttccagaagatgttcgcggaaagaaggagatcaaattccttgagct 41884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 811 - 631
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| || ||||| |||||||| ||||||||  || |||| ||||||||||| ||||| ||||||    | | |||||| |||||    
T  811 agacgtggcttaaggagatagaaagagttttccgtgttatgcagtgcactgaagttcagaaggtgcgatttggtacacatcaattggctgaggaagctga 712  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcct 194  Q
    |||||||||| | ||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  711 tgattggtggattagtcttctacctactttagagcaagacggtgttgtggttacttgggctgtgtttaggagggagttcct 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 1110 - 875
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||| | ||||||||  | |||||||||||||||||  || | |||||||| ||| | || || || |||  ||||| |||||| |||||    
T  1110 agacgtggcttaaatatattgagaggattttccgtgtgatgcagtgcactgaggtccagaaagtgtgattcggtacgcattagctagctgaggaagctga 1011  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| || |||||  ||| | ||||| ||||| |||  |  || |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  1010 tgattggtgggttagccttctgcctaacctagagcaagacggtgcggctgtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 911  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||||||||||| |||||||||||||||||||    
T  910 gatgttcgtgggaagaaagagatcgagttccttgag 875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 251
Target Start/End: Original strand, 187 - 341
Alignment:
Q  97 ctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaa 196  Q
    |||| |||||| ||||||||||||||||| || |||||| ||||| ||||| ||||  ||| ||  || |||||||||||||| ||||| |||||||| |    
T  187 ctagctgaggaagctgatgattggtgggttagccttctacctaccctagagcaagaaggtgctgctgtgacttgggctgtgttcaggagagagttcctga 286  T
Q  197 acagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
      ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  287 gaagatactttccggaagatgttcgcgggaagaaagagatcgagttccttgagct 341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 706 - 520
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggt 164  Q
    |||| ||||| ||||||||||| ||||||  ||||| |||||| ||||||||||||||||| || |||||| ||| | ||||| ||||  ||| ||  ||    
T  706 aagttcagaaagtgcgttttggtacacatcagctagctgaggaagctgatgattggtgggttagccttctacctaacctagagcaagagggtgctgctgt 607  T
Q  165 tacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
     |||||||||||||| ||||| |||||| | |  ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  606 gacttgggctgtgttcaggagagagttcttgagaagatactttccggaagatgttcgcgggaagaaagatatcgagttccttgagct 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 249
Target Start/End: Complemental strand, 9194 - 8989
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    ||||| |||||||||||  || | ||||||||| |||| ||||| || |||  ||||| |||||| |||||||| |||||||| |||||| || |||||     
T  9194 ttccgagtgatgcagtgcactgaggtccagaag-tgcgatttggtactcatcagctagctgaggaagctgatgactggtgggttagtcttttacctaccc 9096  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    | ||| ||||  | | ||| ||||||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||||||||||||    
T  9095 ttgagcaagaaggagctgttgttacttgggctgtgttcaggagagagttcctgaggagatactttccggaagatgttcgcgggaagaaagagatcgagtt 8996  T
Q  243 ccttgag 249  Q
    |||||||    
T  8995 ccttgag 8989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 905 - 667
Alignment:
Q  7 ggagcagagacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgagg 106  Q
    |||||| |||||| |||||| |||||||| ||||| || ||||| ||||| ||  || || | ||||||||||| ||||| ||||||  | | | |||||    
T  905 ggagcacagacgtggctcaaggagattgaaagagtttttcgtgttatgcaatgcactgaaattcagaaggtgcgatttggtacacatcagttggctgagg 806  T
Q  107 aggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactt 206  Q
    | ||||||||||||||| | ||||||||| ||||  ||||| | ||  |||   | |||||||||| |||||||| ||| ||||||||||||||||||||    
T  805 aagctgatgattggtggattagtcttctacctactctagagcaggatggtgcgtttgttacttgggttgtgtttatgagagagttcctaaacagatactt 706  T
Q  207 tccggaagatgttcgtgggaagagagagatcgagttcct 245  Q
    ||||||||||||||| ||||||| |||||| || |||||    
T  705 tccggaagatgttcgcgggaagaaagagattgaattcct 667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 13365 - 13602
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| |||||||| |||||  | |||||||||||||||||  || | |||||||| ||||| || || || |||| ||||| |||||| |||||    
T  13365 agacgtggcttaaagagatagagaggattttccgtgtgatgcagtgcactgaggtccagaaagtgcgattcggtacgcataagctagctgaggaagctga 13464  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||| ||||  | |  ||||| || |||| |||||| ||||| |||||||| |  |||||||||||||||    
T  13465 tgattggtgggttagtctgctacctaaccttgagcaagatggagcggtggtgacatgggttgtgttcaggagagagttcctgagaagatactttccggaa 13564  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||| ||||||||||||||    
T  13565 gatgttcgcgggaagaaagagatagagttccttgagct 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 251
Target Start/End: Complemental strand, 442565 - 442384
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| ||||| ||||| ||||||| |||||| ||||||||||||||||||||| || || ||| | || || | |   |||  || |||||||    
T  442565 cagaaggtgcgctttggtacacacatgctagctgaggaagctgatgattggtgggtgagtattttacctatcctatagcacggaggtggagttgttactt 442466  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||| || |||||| || |||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  442465 gggctgtgtttagaagagagttcttagacagatactttctggaagatgttcgcgggaagaaagagatcgagtttcttgagct 442384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 167577 - 167723
Alignment:
Q  72 gaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgg 171  Q
    ||||||||| || || || || ||||||| | |||| |||||||| |||||||| ||||||||| ||  | ||||| ||||  ||| ||| |||||||||    
T  167577 gaaggtgcggttcggcacgcacatgctagctaaggaagctgatgactggtgggttagtcttctacctgtcctagagcaagatggtgctgttgttacttgg 167676  T
Q  172 gctgtgtttaggagggagttcctaaacagatactttccggaagatgt 218  Q
    ||||| |||||||| |||||  | | |||||| |||||||| |||||    
T  167677 gctgtatttaggagagagtttttgagcagatattttccggaggatgt 167723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 248
Target Start/End: Complemental strand, 7024 - 6846
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    |||||||||||||| || || || ||| ||| |||||| ||||||||||||||||||||| |||||  || | ||||| ||||  ||   || |||||||    
T  7024 cagaaggtgcgtttcggtacgcacatgttagctgaggaagctgatgattggtgggtgagtgttctacatatcctagagcaagatggttcagttgttactt 6925  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||||||||||| |||||| || | ||||||||||||||||||||||| ||||||| ||| || |||||||||||    
T  6924 gggctgtgtttaggagagagttcttagatagatactttccggaagatgttcgcgggaagaaagaaattgagttccttga 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 250
Target Start/End: Complemental strand, 3867 - 3682
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggt 164  Q
    |||| ||||| ||||| ||||| || || |||||||  ||||| ||||||||||||||||| ||| ||| | ||  ||||||| | |   |||  || ||    
T  3867 aagttcagaaagtgcgctttggtacgcacatgctagcagaggaagctgatgattggtgggttagtattcaacctgtcttagagcacggaggtggagttgt 3768  T
Q  165 tacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagc 250  Q
    ||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  3767 tacctgggctgtgtttaggagagagttcctgaacagatactttccggaagatgttcgtgggaagaaagagattgagtttcttgagc 3682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 251
Target Start/End: Original strand, 23590 - 23798
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    |||||||||||||||||  || | || ||||| |||| |||||| ||||||  ||||| |||||| |||||||| |||||||| |  |||||  ||| |     
T  23590 ttccgtgtgatgcagtgcactgaggtacagaaagtgcattttggtacacatcagctagctgaggaagctgatgactggtgggttatccttctccctaacc 23689  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    ||||| ||||  ||| ||  || |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| ||| ||||||||    
T  23690 tagagcaagatggtgctgctgtgacttgggctgtgttaaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagaaatcgagtt 23789  T
Q  243 ccttgagct 251  Q
    |||||||||    
T  23790 ccttgagct 23798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 5952 - 5730
Alignment:
Q  29 agattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgag 128  Q
    ||||||||||  | |||||||||||||||||  || |||| ||||| ||||| || || || |||  ||||| |||||| ||| ||||||||||||| ||    
T  5952 agattgagaggattttccgtgtgatgcagtgcactgaagttcagaaagtgcgattcggtactcatcagctagctgaggaagctaatgattggtgggttag 5853  T
Q  129 tcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaag 228  Q
    ||| ||| ||| | | ||| ||||  | | ||  || |||||| ||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||    
T  5852 tctgctacctaaccttgagcaagatggagctgctgtgacttggactgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaag 5753  T
Q  229 agagagatcgagttccttgagct 251  Q
    | |||||||||||||||||||||    
T  5752 aaagagatcgagttccttgagct 5730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 425268 - 425034
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||| ||||| ||  || |||  ||||| ||||| ||||| || |||  ||||| ||||||  ||||    
T  425268 agacgtggcttaaagagattgagaggattttccgtgttatgcaatgcactcaagatcagaaagtgcggtttggtactcatcagctagctgaggaaactga 425169  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||||| ||||| | ||| ||||  | | ||| || ||||||||||| || ||||| |||||||| |  |||||||||||||||    
T  425168 tgattggtgggttagtcttctacctacccttgagcaagaaggagctgttgtgacttgggctgttttcaggagagagttcctgagaagatactttccggaa 425069  T
Q  214 gatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||  |||||||  |||||||||||||||||    
T  425068 gatgttcacgggaagaaggagatcgagttccttga 425034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 138655 - 138421
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||| ||||||  | |||||||||||||||||  |  | |||||||| || || ||||| || |||  ||||| ||||||||||||    
T  138655 agacgtggcttaaagagactgagaggattttccgtgtgatgcagtgcaccgaggtccagaaagtacgatttggtactcatcagctagctgaggaggctga 138556  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||| ||||  | | ||  || ||||||| |||||| ||||| |||||||| |  |||||||||||||||    
T  138555 tgattggtgggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggttgtgttcaggagagagttcctgagaagatactttccggaa 138456  T
Q  214 gatgttcgtgggaagagagagatcgagttccttga 248  Q
    |||||||| || ||||  |||||||||||||||||    
T  138455 gatgttcgcggaaagaaggagatcgagttccttga 138421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 251
Target Start/End: Original strand, 14394 - 14575
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||| | ||||| ||||| ||||||| | |||| |||||||| |||||||||||| ||||| ||| | ||||| | |   |||  || |||||||    
T  14394 cagaaggtgtgctttggtacacacatgctagctaaggaagctgatgactggtgggtgagtattctacctatcctagagcacggaggtggagttgttactt 14493  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||| ||||| |||||| ||||| ||| ||||    
T  14494 gggctgtgtttaggagagagtttctagacagatactttccggaagatgtttgtgtgaagaaagagattgagtttcttcagct 14575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 55970 - 55733
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| |||||||| |||||  | |||||||||||||||||  || | |  ||||| ||||| || || || |||  ||||| |||||| |||||    
T  55970 agacgtggcttaaagagatagagaggatcttccgtgtgatgcagtgcactgaggatcagaaagtgcgattcggtactcatcagctagctgaggaagctga 55871  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||  ||||| | ||| ||||  | | ||| || ||||||||||| || ||||| |||||||| |  |||||||||||| ||    
T  55870 tgattggtgggttagtctgctgcctacccttgagcaagaaggagctgttgtgacttgggctgttttcaggagagagttcctgaggagatactttccgaaa 55771  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  55770 gatgttcgcgggaagaaagagatcgagttccttgagct 55733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 21946 - 21711
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||| ||||||||  || | |  ||||| ||||  ||||| || |||  ||||| |||||| | |||    
T  21946 agacgtggcttaaagagattgagaggattttccgtgttatgcagtgcactgaggatcagaaagtgcagtttggtactcatcagctagctgaggaagttga 21847  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| ||||||||  | |||||| ||||| | | | ||||  | | ||| || || ||||||||||| ||||| |||||||| |  |||||||||||||||    
T  21846 tgactggtgggttggccttctacctacccttgggcaagaaggagctgttgtgacctgggctgtgttcaggagagagttcctgagaagatactttccggaa 21747  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| |||||||  ||||| || |||||||||    
T  21746 gatgttcgcgggaagaaggagattgaattccttgag 21711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 12263 - 12203
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||||||||| ||||| |||||||| |  |||||||||||||||||||||||||||||||    
T  12263 tgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgtgggaaga 12203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 8685 - 8922
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||||||||||||||||||  | ||||| || ||||| ||   | | || ||||||||||| ||||| || || ||||||| |||||| |||||    
T  8685 agacgtggctcaaagagattgagaggattttccgagttatgcaatgcaatgaggttcagaaggtgcgctttggtacgcacatgctagctgaggaagctga 8784  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| |||||||||||| ||||| ||| | ||||| | |   |||  || ||||||||||  |||||||| || |||||| || |||||||||||||||||    
T  8785 tgactggtgggtgagtattctacctatcctagagcacggaggtggagttgttacttgggtagtgtttagaagagagttcttagacagatactttccggaa 8884  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| || |||| |||||| ||||| ||||||||    
T  8885 gatgttcgcggaaagaaagagattgagtttcttgagct 8922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 818 - 581
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | || ||||||||||||||   | | || |||||||| || ||||| || |||  ||||| ||| || |||||    
T  818 agacgtggcttaaggagattgagaggatatttcgtgtgatgcagtgcattgaggttcagaaggtacgatttggtactcatcagctagctgacgaagctga 719  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||||| | ||||| | ||| ||||  | | |||||| |||||||||||||| ||||| |||||| | |  |||||||||||||||    
T  718 tgattggtgggttagtcttcaacctacccttgagcaagaaggagctgtggtgacttgggctgtgttcaggagagagttcttgagaagatactttccggaa 619  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  |||||||| |||||||||||    
T  618 gatgttcgcgggaagaaggagatcgaattccttgagct 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 139090 - 139182
Alignment:
Q  159 tgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||| ||||||||| |||| |||||  ||||||| |  ||||||||||||||||||||||| || ||||  |||||||| |||||||||||    
T  139090 tgtggtgacttgggctatgttcaggagaaagttcctgagaagatactttccggaagatgttcgcggaaagaaggagatcgaattccttgagct 139182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 172088 - 171853
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||| ||  | |||||||||||||||||  |||| |||||||| || || ||||| || |||  ||||| |||||| |||||    
T  172088 agacgtggcttaaggagattgataggattttccgtgtgatgcagtgcactaaggtccagaaagtacgatttggtactcatcagctagctgaggaagctga 171989  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| |||||  || ||| | | ||| ||||  |   ||  || |||||||||||||||||||| |||||||| |  ||||||||||||||     
T  171988 tgattggtgggttagtctgttacctaaccttgagcaagatggatctgctgtgacttgggctgtgtttaggagagagttcctgagaagatactttccggag 171889  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
     ||||||| ||||||| |||||||||||||||||||    
T  171888 aatgttcgcgggaagaaagagatcgagttccttgag 171853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 218
Target Start/End: Original strand, 162336 - 162547
Alignment:
Q  7 ggagcagagacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgagg 106  Q
    |||||| |||||| ||| || |||||||| ||||| |||||||| ||||| ||   | |||| ||||||||||| ||||| ||||||  | | | |||||    
T  162336 ggagcacagacgtggctgaaggagattgaaagagttttccgtgttatgcaatgcattgaagttcagaaggtgcgatttggtacacatcagttggctgagg 162435  T
Q  107 aggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactt 206  Q
    | ||||||||||||||| | ||||||||| ||||  ||||| | ||  | |   | ||||||||||||||||||||||| ||||||||||||||||||||    
T  162436 aagctgatgattggtggattagtcttctacctactctagagcaggatggcgcgattgttacttgggctgtgtttaggagagagttcctaaacagatactt 162535  T
Q  207 tccggaagatgt 218  Q
    ||| ||||||||    
T  162536 tccagaagatgt 162547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 251
Target Start/End: Complemental strand, 49549 - 49394
Alignment:
Q  96 gctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttccta 195  Q
    ||||| |||||| ||||||||||||||||| | ||| ||  ||||| | ||| ||||  | | ||| || ||||||||||| || ||||| ||||||||     
T  49549 gctagctgaggaagctgatgattggtgggttaatctgctgcctacccttgagcaagaaggagctgttgtgacttgggctgttttcaggagagagttcctg 49450  T
Q  196 aacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  49449 agaagatactttccggaagatgttcgcgggaagaaagagatcgagttccttgagct 49394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 3738 - 3596
Alignment:
Q  109 gctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttc 208  Q
    ||||||||||||||||| || |||||  |||   ||||| ||||| ||||||  || |||||||||||||| ||||| |||||||| |  ||||||||||    
T  3738 gctgatgattggtgggttagccttctgcctaatctagagcaagacggtgttgctgtgacttgggctgtgttcaggagagagttcctgagaagatactttc 3639  T
Q  209 cggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    || |||||||||| ||||||| |||||||||||||||||||||    
T  3638 cgaaagatgttcgcgggaagaaagagatcgagttccttgagct 3596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 3824 - 3758
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcg 80  Q
    |||||| ||||||||||||||||||  | |||||||||||||||| | || | |||||||| |||||    
T  3824 agacgtggctcaaagagattgagaggattttccgtgtgatgcagtatactgaggtccagaaagtgcg 3758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 251
Target Start/End: Original strand, 28349 - 28503
Alignment:
Q  97 ctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaa 196  Q
    |||| |||||| ||||||||||||||||| || |||||  ||| | ||||| ||||| ||| ||  || ||||||| |||||| ||||| |||||||| |    
T  28349 ctagctgaggaagctgatgattggtgggttagccttctgcctaacctagagcaagacggtgctgctgtgacttgggttgtgttcaggagagagttcctga 28448  T
Q  197 acagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
      ||||||||||||||||||||||| |||||||  ||||||||||||||||||||    
T  28449 gaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttgagct 28503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 14923 - 15160
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||  | |||||||||||||||||   | | || ||||| ||||| ||||| ||||||  ||| | |||||| || ||    
T  14923 agacgtggcttaaggagatcgagaggattttccgtgtgatgcagtgcattgaggttcagaaagtgcgatttggtacacatcagctggctgaggaagccga 15022  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||  || |||||| ||| | ||||| ||||  ||| ||  || ||||||| |||||| ||||| |||||||| |  |||||||||||||||    
T  15023 tgattggtgggatagccttctacctaacctagagcaagatggtgctgctgtgacttgggatgtgttcaggagagagttcctgagaagatactttccggaa 15122  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||| |||||||||||||||||    
T  15123 gatgttcgcgggaagaaagaaatcgagttccttgagct 15160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 14376 - 14613
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||  | |||||||||||||||||  || | || ||||| ||||| || || || |||  ||||| |||||| |||||    
T  14376 agacgtggcttaaggagatcgagaggattttccgtgtgatgcagtgcactgaggttcagaaagtgcgattcggtacgcatcagctagctgaggaagctga 14475  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| |||||||| ||||| ||| ||| | | ||| ||||  | | ||  || |||||||||||||| ||||| |||||||| |  |||||||||||||||    
T  14476 tgactggtgggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggctgtgttcaggagagagttcctgagaagatactttccggaa 14575  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||| || |||||||||||||||||||||    
T  14576 gatgttcgcgggatgaaagagatcgagttccttgagct 14613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 10843 - 10928
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10843 acttgggctgtgttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaagagatcgagttccttgagct 10928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 251
Target Start/End: Complemental strand, 37435 - 37230
Alignment:
Q  46 cgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttag 145  Q
    ||||||||||||||  || | || ||||| ||||| ||||| ||||||  ||| | |||||| || |||||||||||||| || |||||| ||| | |||    
T  37435 cgtgtgatgcagtgcactgaggttcagaaagtgcgatttggtacacatcagctggctgaggaagccgatgattggtgggttagccttctacctaacctag 37336  T
Q  146 aggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttcct 245  Q
    || ||||  ||| ||  || |||||||||||||| ||||| |||||| | |  ||||||||||||||||||||||| ||||||| ||| |||| ||||||    
T  37335 agcaagatggtgctgctgtgacttgggctgtgttcaggagagagttcttgagaagatactttccggaagatgttcgcgggaagaaagaaatcgggttcct 37236  T
Q  246 tgagct 251  Q
    ||||||    
T  37235 tgagct 37230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 18129 - 17892
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || |||||||||||  | |||| ||||||||||||  || | |||||||| ||||| ||  | || |||  ||||| |||||| |||||    
T  18129 agacgtggcttaaggagattgagaggattttccatgtgatgcagtgcactgaggtccagaaagtgcgattccgtacgcatcagctagctgaggaagctga 18030  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    |||||||||||| ||||| ||| ||| | | ||| ||||  | | ||  || |||||||||||||| ||||| |||||| | |  |||||||||||||||    
T  18029 tgattggtgggttagtctgctacctaaccttgagcaagatggagctgctgtgacttgggctgtgttcaggagagagttcttgagaagatactttccggaa 17930  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| ||||||||||||||| |||||    
T  17929 gatgttcgcgggaagaaagagatcgagttcctagagct 17892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 4238 - 4159
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttcct 245  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  ||||||||||||||    
T  4238 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttcct 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 251
Target Start/End: Original strand, 458 - 664
Alignment:
Q  45 ccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacctta 144  Q
    |||||||||||||||  || | || ||||| |||| |||||| || |||  ||||| |||||| |||||||| |||||||| ||  ||||| ||| | ||    
T  458 ccgtgtgatgcagtgcactgaggttcagaaagtgcattttggtacgcatcagctagctgaggaagctgatgactggtgggttagctttctacctaaccta 557  T
Q  145 gaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttcc 244  Q
    ||| ||||| ||| || ||| |||||||||||||| ||||| |||||||| |  |||||||||  |||| ||||||  ||||||| ||| ||||||||||    
T  558 gagcaagacggtgctgcggtgacttgggctgtgttcaggagagagttccttagaagatactttatggaatatgttcacgggaagaaagaaatcgagttcc 657  T
Q  245 ttgagct 251  Q
    |||||||    
T  658 ttgagct 664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 251
Target Start/End: Original strand, 808 - 994
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggt 164  Q
    |||| ||||||||||| ||||| || || ||| |||  | ||| ||||||||||||||||| ||| ||| | ||| ||||||| | |   |||  || ||    
T  808 aagttcagaaggtgcgctttggtacgcacatgttagcggtggaagctgatgattggtgggttagtattcaacctatcttagagcacggaggtggagttgt 907  T
Q  165 tacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||||||| |||||| | |||||||||||||||||||||||||| ||||||| ||| || ||||| ||||||||    
T  908 tacttgggttgtgtttaggagagagttcttgaacagatactttccggaagatgttcgcgggaagaaagatattgagtttcttgagct 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 893 - 656
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||| ||||||||  || |||  ||||| ||||| ||||| || |||  ||||| |||||| |||||    
T  893 agacgtggcttaaagagattgagaggattttccgtgttatgcagtgcactgaagatcagaaagtgcggtttggtactcatcagctagctgaggaagctga 794  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| ||||||||  | |||||||||||| | | | ||||  | | ||| || || ||||||||||| | ||| |||||||| |  |||||||||||||||    
T  793 tgactggtgggttggccttctaactacccttgggcaagaaggagctgttgtgacctgggctgtgttcaagagagagttcctgagaagatactttccggaa 694  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| |||||||  ||||| || |||||||||||    
T  693 gatgttcgcgggaagaaggagattgaattccttgagct 656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 670 - 468
Alignment:
Q  49 gtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagagg 148  Q
    |||||||||||  || | || ||||| ||||| ||||| ||||||  ||| | |||||| ||||||||||||||||| || |||||| ||| | |||||     
T  670 gtgatgcagtgcactgaggttcagaaagtgcgatttggtacacatcagctggctgaggaagctgatgattggtgggttagccttctacctaacctagagt 571  T
Q  149 aagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||  ||| ||  || |||||||||||||| ||||| |||||||| |  | |||||||| ||||||||||||  |||||| ||| ||||| ||||||||    
T  570 aagatggtgctgctgtgacttgggctgtgttcaggagagagttcctgagaaaatactttctggaagatgttcgcaggaagaaagaaatcgaattccttga 471  T
Q  249 gct 251  Q
    |||    
T  470 gct 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 105028 - 104958
Alignment:
Q  181 aggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  105028 aggagagagttcctagacagatactttccggaagatgttcgcgggaagaaagagatcgagttccttgagct 104958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 105164 - 105038
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||  |  | || ||||| ||||||||||| || || ||||||| |||||| |||||    
T  105164 agacgtggctcaaagagattgagagagtgttccgtgtcatgcagtgcacagaggttcagaaagtgcgttttggtacgcacatgctagctgaggaagctga 105065  T
Q  114 tgattggtgggtgagtcttctaactac 140  Q
    | |||||||| | ||||||||| ||||    
T  105064 ttattggtggattagtcttctacctac 105038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 877 - 789
Alignment:
Q  163 gttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||||  ||||||| |||||| ||||| ||||||||    
T  877 gttacctgggctgtgtttaggagagagttcctgaacaaatactttccggaagatgttcacgggaagaaagagattgagtttcttgagct 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 5900 - 5820
Alignment:
Q  171 ggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||| |||||| ||||| ||||||||    
T  5900 ggctgtgtttaggagagagttccttgacagatactttccagaagatgttcgtgggaagaaagagattgagtttcttgagct 5820  T

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Target: scaffold0393 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 251
Target Start/End: Complemental strand, 371 - 163
Alignment:
Q  43 ttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactacct 142  Q
    |||||||||||||||||  || | || ||||| ||||| ||||| ||||||  ||| | |||||| || |||||||||||||| || |||||| ||| |     
T  371 ttccgtgtgatgcagtgcactgaggttcagaaagtgcgatttggtacacatcagctggctgaggaagccgatgattggtgggttagccttctacctaacc 272  T
Q  143 tagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    | ||| ||||  ||| ||  || |||||||||||||| ||| | |||||||| |  ||||||||| |||||||||||||  |||||| ||| ||| ||||    
T  271 ttgagcaagatggtgctgctgtgacttgggctgtgttcaggcgagagttcctgagaagatacttttcggaagatgttcgccggaagaaagaaatcaagtt 172  T
Q  243 ccttgagct 251  Q
    |||||||||    
T  171 ccttgagct 163  T

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Target: scaffold0034 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 251
Target Start/End: Original strand, 121559 - 121748
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaa----ctacct----tagaggaagactgtgttgt 161  Q
    ||||| ||||| ||||| ||||||  ||| | |||||| ||||||||||||||||| |||||||||     ||||||    ||||| ||||  ||| ||     
T  121559 cagaaagtgcgatttggtacacatcagctggctgaggaagctgatgattggtgggttagtcttctagtcttctacctaacctagagcaagatggtgctgc 121658  T
Q  162 ggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
     || |||||||||||||||||||| |||||||| |  ||||||||| ||||||||||| | ||||||| ||| |||||||||||||||||    
T  121659 tgtgacttgggctgtgtttaggagagagttcctgagaagatacttttcggaagatgtttgcgggaagaaagaaatcgagttccttgagct 121748  T

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Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 71282 - 71224
Alignment:
Q  73 aaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtct 131  Q
    |||||||| |||||||| || ||||| | ||||||||| |||||||||||||| |||||    
T  71282 aaggtgcggtttggaacgcacatgctggctgaggaggcagatgattggtgggtaagtct 71224  T

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Target: scaffold0161 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 36701 - 36515
Alignment:
Q  65 aagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggt 164  Q
    |||||||||||||||||||||| || || |||||||  ||||| ||| ||||||||||||| ||| ||| | | | ||| ||| | ||  |||  || ||    
T  36701 aagtccagaaggtgcgttttggtacgcacatgctagccgaggaagcttatgattggtgggttagtattcaagccatcttggagcatgaaggtggggttgt 36602  T
Q  165 tacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||||||  |||||||  ||||||||| | | |||||||||||||||| ||||||| |||||||  ||||| ||||| ||||||||    
T  36601 tacttgggtcgtgtttaaaagggagttcttgagcagatactttccggaatatgttcgcgggaagaaggagattgagtttcttgagct 36515  T

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Target: scaffold0009 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 229339 - 229424
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||| ||||| |||||| | |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  229339 acttgggctgtgttcaggagagagttcatgagaagatactttccggaagatgttcgcgggaagaaagagatcgatttccttgagct 229424  T

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Target: scaffold0609 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 8371 - 8292
Alignment:
Q  169 tgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||||||||||||||| |||||||| | ||| ||||||||||||||||| ||||| |||| |||||||||||| |||||    
T  8371 tgggctgtgtttaggagagagttcctgagcagctactttccggaagatgtccgtggaaagaaagagatcgagtttcttga 8292  T

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Target: scaffold0505 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 2571 - 2492
Alignment:
Q  163 gttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagtt 242  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||  ||||||  ||||| |||||    
T  2571 gttacctgggctgtgtttaggagagagttcctgaacagatactttccggaagatgttcggaggaagaacgagatagagtt 2492  T

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Target: scaffold0431 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 11333 - 11098
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| ||||||||||||||  | |||||||| ||||||||  || |||  ||||| || || ||||| || |||  ||||| |||||| |||||    
T  11333 agacgtggcttaaagagattgagaggattttccgtgttatgcagtgcactgaagatcagaaagtacggtttggtactcatcagctagctgaggaagctga 11234  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaa 213  Q
    ||| ||||||||  | |||||| ||||| | | | ||||  | | ||| || || ||||||||||| ||| | |||||||| |  |||||||||||||||    
T  11233 tgactggtgggttggccttctacctacccttgggcaagaaggagctgttgtgacctgggctgtgttcaggggagagttcctgagaagatactttccggaa 11134  T
Q  214 gatgttcgtgggaagagagagatcgagttccttgag 249  Q
    |||||||| |||||||  ||||| || |||||||||    
T  11133 gatgttcgcgggaagaaggagattgaattccttgag 11098  T

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Target: scaffold0055 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 23061 - 22979
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  23061 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttga 22979  T

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Target: scaffold0052 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 8050 - 7968
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttga 248  Q
    ||||||||||| || ||||| |||||||| |  ||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  8050 acttgggctgttttcaggagagagttcctgagaagatactttccggaagatgttcgcgggaagaaggagatcgagttccttga 7968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 1 - 52
Alignment:
Q  200 gatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  1 gatactttccggaagatgttcgcgggaagaaagagatcgagttccttgagct 52  T

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Target: scaffold0420 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 7487 - 7534
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgtt 61  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  7487 agacgtggctcaaagagattcagagagtgttccatgtgatgcagtgtt 7534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 221
Target Start/End: Original strand, 17750 - 17901
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttactt 169  Q
    ||||||||||| ||||| || || ||| |||  ||||| ||||||||||||||||||||| ||||| | | | ||| | | |   |||  || ||||| |    
T  17750 cagaaggtgcgctttggtacgcacatgttagcggaggaagctgatgattggtgggtgagtgttctaccaatcctagggaacggaggtgaagttgttacat 17849  T
Q  170 gggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcg 221  Q
    || || |||||||||| ||||| || ||||| ||||||||||||||||||||    
T  17850 ggactatgtttaggagagagtttctgaacaggtactttccggaagatgttcg 17901  T

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Target: scaffold0656 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 276 - 114
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctga 113  Q
    |||||| ||| || ||||| |||||  | ||||| |||||| ||||  || | |||||||||||||| ||||| || |||  ||||| |||||| |||||    
T  276 agacgtggcttaaggagatagagaggattttccgggtgatgtagtgcactgaggtccagaaggtgcgatttggtactcatcagctagctgaggaagctga 177  T
Q  114 tgattggtgggtgagtcttctaactaccttagaggaagactgtgttgtggttacttgggctgt 176  Q
    ||| |||||||| |||||| || ||||| | ||| ||||  | | ||| ||||||||||||||    
T  176 tgactggtgggttagtcttttacctacccttgagcaagaaggagctgttgttacttgggctgt 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 35550 - 35592
Alignment:
Q  14 agacgtagctcaaagagattgagagagtgttccgtgtgatgca 56  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  35550 agacgtggctcaaagagattgagagagtgttccgtgttatgca 35592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 11395 - 11461
Alignment:
Q  163 gttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    ||||| || ||| |||||||||| |||||||| ||||| | |||||||||||||||||| |||||||    
T  11395 gttacatgcgctttgtttaggagagagttcctgaacaggtgctttccggaagatgttcgcgggaaga 11461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 6349 - 6288
Alignment:
Q  71 agaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtctt 132  Q
    |||||||||| ||||| ||||| ||| ||| ||| ||||| |||||||||||||||||||||    
T  6349 agaaggtgcggtttggtacacacatgttagctgaagaggcagatgattggtgggtgagtctt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 11134 - 11195
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtct 131  Q
    ||||||||||| ||||| || || ||||||| ||| ||||| |||||||||||||| |||||    
T  11134 cagaaggtgcggtttgggacgcacatgctagctgaagaggccgatgattggtgggtaagtct 11195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 229
Target Start/End: Complemental strand, 16352 - 16175
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtcttctaactaccttagaggaag 151  Q
    |||||||| ||| |||| || |||||||| ||||| ||  | |||||||  ||||||||||||||||||||||| ||||| ||| |     | ||| | |    
T  16352 atgcagtgctctgaagtacaaaaggtgcggtttgggacgtacatgctagcggaggaggctgatgattggtgggtaagtctgctacccgtacttgagtagg 16253  T
Q  152 actgtgttgtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaaga 229  Q
    || |||  ||||| || ||||||||||| |||||||| |||||  | || || |||||||||||||| ||||| ||||    
T  16252 acagtgcggtggtgacctgggctgtgttcaggagggaattcctggataggtattttccggaagatgtccgtggcaaga 16175  T

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Target: scaffold0058; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 22945 - 22854
Alignment:
Q  160 gtggttacttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    ||||| || ||||||||||| |||||||| ||||  || ||||| |||||||||||||| || || |||| |||||| ||||| || |||||    
T  22945 gtggtgacctgggctgtgttcaggagggaattccggaatagatattttccggaagatgtccgaggtaagaaagagattgagtttctagagct 22854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 12335 - 12264
Alignment:
Q  52 atgcagtgttctaaagtccagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgg 123  Q
    |||||||||||| | || || |||||||| ||||| || || ||||||| ||| ||||||||||||||||||    
T  12335 atgcagtgttctgaggttcaaaaggtgcggtttgggacgcacatgctagctgaagaggctgatgattggtgg 12264  T

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Target: scaffold0148 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 6984 - 6929
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggt 125  Q
    ||||||||||| ||||| || |||||| | | ||||||||||||||||||||||||    
T  6984 cagaaggtgcgctttggtacgcatatgttggctgaggaggctgatgattggtgggt 6929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 98070 - 98140
Alignment:
Q  166 acttgggctgtgtttaggagggagttcctaaacagatactttccggaagatgttcgtgggaagagagagat 236  Q
    ||||||||||| || |||||||| ||||| || || ||||| ||||||||||| || ||||||| ||||||    
T  98070 acttgggctgtattcaggagggaattcctgaataggtacttcccggaagatgtccgagggaagaaagagat 98140  T

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Target: scaffold0243 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 23480 - 23517
Alignment:
Q  214 gatgttcgtgggaagagagagatcgagttccttgagct 251  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  23480 gatgttcgcgggaagaaagagatcgagttccttgagct 23517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 274 - 335
Alignment:
Q  70 cagaaggtgcgttttggaacacatatgctagttgaggaggctgatgattggtgggtgagtct 131  Q
    ||||||||||| ||||| ||||| ||| ||| |||||| |||||||| |||||||| |||||    
T  274 cagaaggtgcggtttgggacacacatgttagctgaggaagctgatgactggtgggtaagtct 335  T

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Target: scaffold0324 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 2679 - 2635
Alignment:
Q  16 acgtagctcaaagagattgagagagtgttccgtgtgatgcagtgt 60  Q
    |||| ||||||||||||||||||  | ||||||||||||||||||    
T  2679 acgtggctcaaagagattgagaggattttccgtgtgatgcagtgt 2635  T

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