View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3853_low_6 (Length: 218)
Name: NF3853_low_6
Description: NF3853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3853_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 30737279 - 30737472
Alignment:
| Q |
6 |
agaagcaaaggctaagaaatctgagtcatgtaatcgatcctctgatggaacaattgttcctctaattcaataatgaagggaagatcaaggttcctctacc |
105 |
Q |
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| T |
30737279 |
agaaacaatggctaagaaatctgagtcatgtaatcgatcctctgatggaacaattgttcctctaattcaataatgaagggaagatcaaggttcctctacc |
30737378 |
T |
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| Q |
106 |
ccatcattggtttaattcagtaaaaaccaagtcgagcatttgtagaaaaatgcctggtctcgaatgttttaaatacatccgagccaacttacat |
199 |
Q |
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| T |
30737379 |
ccatcattggtttaattcaggaaaaaccaagtcgagcatttgtagaaaaatgcctggtctcgaatgttttaaatacatccgagccaacttacat |
30737472 |
T |
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