View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3854_high_6 (Length: 251)
Name: NF3854_high_6
Description: NF3854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3854_high_6 |
 | |
|
| [»] scaffold0573 (1 HSPs) |
| | |
|
| [»] scaffold0054 (1 HSPs) |
| | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0014 (3 HSPs) |
| | |
|
| [»] scaffold0572 (1 HSPs) |
| | |
|
| [»] scaffold0429 (1 HSPs) |
| | |
|
| [»] scaffold0051 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 37)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 24890330 - 24890086
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
24890330 |
tattcctaatgtggtaacttacagttcccttattgatggtttgtgtaaattggggagaatcttttatgctttgaagctagtcgatgagatgcatgataga |
24890231 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| || | ||||||||||||||||||||||||||| |
|
|
| T |
24890230 |
ggtcagccacctaatatagttacttacagttctatattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaacaaatttgaaag |
24890131 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattcatatca |
244 |
Q |
| |
|
|||| |||||| ||||| ||||||||| |||||| |||| ||||| |
|
|
| T |
24890130 |
accagggtattcgaccagatatgtacacatacaccattcttatca |
24890086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 31000022 - 30999838
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31000022 |
tattcgtaatgtgttaatttacagtttccttattgatggtttgtgtaaatcggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
30999923 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattat |
185 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
30999922 |
ggtcaaccacctaatatagttatttacagttctatattggatgctttatgcaaaaaccatcgtgttgaccaggcaattgcattat |
30999838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 28926631 - 28926393
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28926631 |
tattcctaatgtggtaacttacaattcccttatcgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgataga |
28926532 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||| |||| || | |||||||||||||||||||| |||||| |
|
|
| T |
28926531 |
ggtcaaccacctgatataattacttacagttctctattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaacaaaattgaaag |
28926432 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| ||| || |||||||||||||| ||||||||||| |
|
|
| T |
28926431 |
accagggtcttcaaccaaatatgtacacatacactattc |
28926393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 24730770 - 24731014
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| ||||||||| || |||||| ||||||||| |||||||||||| |||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
24730770 |
tattcctaatgtggtaacttacaattcccttattgatggtttgggtaaattggggaaaatctcttgtgtgttgaagctagtcgatgagatgcatgataga |
24730869 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||| || | ||||||||||||||||||||||||||| |
|
|
| T |
24730870 |
ggtcaaccacctaatataataacttacaattctatattggatgctttatgcaaaaaccatcatgttgacaaggcaattgcattattaacaaatttgaaag |
24730969 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattcatatca |
244 |
Q |
| |
|
|||| |||||| ||||| ||||||||| ||||||| ||| ||||| |
|
|
| T |
24730970 |
accagggtattcgaccagatatgtacacatacactgttcttatca |
24731014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 29358063 - 29357819
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||| ||| |||||||||||| |||||| |||||||| ||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
29358063 |
tattcctaacgtggtaacttacagttcccttattgatggtttatgtaaatcggggaaaatctcttatgctttgaagctagtggatgagatgcatgataga |
29357964 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||| ||||||||| | ||||| |
|
|
| T |
29357963 |
ggtcaaccacctaatatagttacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaatgcaattgcgttattaacacagatgaaaa |
29357864 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattcatatca |
244 |
Q |
| |
|
|||| |||||| |||||||||||||| ||||||||||| ||||| |
|
|
| T |
29357863 |
accagggtattcaaccaaatatgtacacatacactattcttatca |
29357819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 29887213 - 29887450
Alignment:
| Q |
2 |
attcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagag |
101 |
Q |
| |
|
|||||| ||||| ||||||||| || ||||||| |||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
29887213 |
attcctgatgtggtaacttacaattcccttatcaatggtttgtgcaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagag |
29887312 |
T |
|
| Q |
102 |
gtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaata |
201 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| |||| ||||||||||| |||||||||| ||| || | |||||||| |||||||||||||||||| | |
|
|
| T |
29887313 |
gtcaaccacctgatataattacttacagttctttattagatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaatttgaaaga |
29887412 |
T |
|
| Q |
202 |
ccacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
||| |||||| ||||||||||||||| ||||||||||| |
|
|
| T |
29887413 |
ccagggtattcgaccaaatatgtacacatacactattc |
29887450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29073678 - 29073916
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| | ||||||| || ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
29073678 |
tattcctaatgtggtgacttacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgataga |
29073777 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||| |||||| |
|
|
| T |
29073778 |
ggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaaattgaaag |
29073877 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| |||||| |||||| |||| ||| ||||||||||| |
|
|
| T |
29073878 |
accaaggtattcgaccaactatgcacacatacactattc |
29073916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29078442 - 29078680
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| | ||||||| || ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
29078442 |
tattcctaatgtggtgacttacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgataga |
29078541 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||| |||||| |
|
|
| T |
29078542 |
ggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaaattgaaag |
29078641 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| |||||| |||||| |||| ||| ||||||||||| |
|
|
| T |
29078642 |
accaaggtattcgaccaactatgcacacatacactattc |
29078680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29106251 - 29106489
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| | ||||||| || ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
29106251 |
tattcctaatgtggtgacttacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgataga |
29106350 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||||||||||||||| |||||| |
|
|
| T |
29106351 |
ggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaaattgaaag |
29106450 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| |||||| |||||| |||| ||| ||||||||||| |
|
|
| T |
29106451 |
accaaggtattcgaccaactatgcacacatacactattc |
29106489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29835130 - 29835368
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | |
|
|
| T |
29835130 |
tattcctgatgtggtaacttacaattcccttattgatggtttgtgtaaattggggaaaatctcttatgctttgaagctagttgatgagatgcatgatcgg |
29835229 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||| ||||||||||| |||||| |
|
|
| T |
29835230 |
ggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaaattgaaag |
29835329 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| |||||| ||||||||||||||| ||||||||||| |
|
|
| T |
29835330 |
accagggtattcgaccaaatatgtacacatacactattc |
29835368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29894468 - 29894706
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | |
|
|
| T |
29894468 |
tattcctgatgtggtaacttacaattcccttattgatggtttgtgtaaattggggaaaatctcttatgctttgaagctagttgatgagatgcatgatcgg |
29894567 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||| ||||||||||| |||||| |
|
|
| T |
29894568 |
ggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaaattgaaag |
29894667 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| |||||| ||||||||||||||| ||||||||||| |
|
|
| T |
29894668 |
accagggtattcgaccaaatatgtacacatacactattc |
29894706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29866564 - 29866802
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||| ||||||||||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||| | |
|
|
| T |
29866564 |
tattcctgatgtggtaacttacaattcccttattgatggtttgtgcaaatcggggaaaatctcttatgctttgaagctagttgatgagatgcatgatcgg |
29866663 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || | |||||||| |||||||||||||||||| |
|
|
| T |
29866664 |
ggtgtaccacctgatataattacttacagttctatattggatgctttatgcaaaaaccatcaggttgacaaggcaattgcgttattaacaaatttgaaag |
29866763 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| |||||| ||||||||||||||| ||||||||||| |
|
|
| T |
29866764 |
accagggtattcgaccaaatatgtacacatacactattc |
29866802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 35 - 238
Target Start/End: Complemental strand, 29211443 - 29211239
Alignment:
| Q |
35 |
gatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttcta |
134 |
Q |
| |
|
|||| ||| ||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
29211443 |
gatgttttttgtaaatcggggaaaatctcttatgctttgaagctagtggatgagatgcatgatagaggtcaaccacctaatatagttacttacagttcta |
29211344 |
T |
|
| Q |
135 |
tattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaataccacggtatttgaccaaatatgtaca-atacac |
233 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||| || | ||| |||||||||||||||| |||||| |||| |||||| ||||||||||| ||| |||||| |
|
|
| T |
29211343 |
tattggatgctttatgcaaaacccatcgggttgacaaggcagttgcattattaacaaaattgaaagaccaaggtattcgaccaaatatgcacacatacac |
29211244 |
T |
|
| Q |
234 |
tattc |
238 |
Q |
| |
|
||||| |
|
|
| T |
29211243 |
tattc |
29211239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 29905555 - 29905780
Alignment:
| Q |
2 |
attcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagag |
101 |
Q |
| |
|
|||||| ||||| ||||||||| || ||||||||||||||||||||||| || | ||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
29905555 |
attcctgatgtggtaacttacaattcccttatcgatggtttgtgtaaatctggaaaaatctcttatgctttgaagctagttgatgagatgcatgatagag |
29905654 |
T |
|
| Q |
102 |
gtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaata |
201 |
Q |
| |
|
|||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||| ||| ||| || | ||||| ||||||||||||| |||||| | |
|
|
| T |
29905655 |
gtcagccacctgatataattacttagagttctatattggatgctttatgcaaaaactatcaggttgacaaggcaatcacattattaacaaaattgaaaga |
29905754 |
T |
|
| Q |
202 |
ccacggtatttgaccaaatatgtaca |
227 |
Q |
| |
|
|| |||||| |||||||||||||| |
|
|
| T |
29905755 |
cctgggtattcaaccaaatatgtaca |
29905780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 30118824 - 30118599
Alignment:
| Q |
2 |
attcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagag |
101 |
Q |
| |
|
|||||| ||||| ||||||||| || ||||||||||||||||||||||| || | ||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
30118824 |
attcctgatgtggtaacttacaattcccttatcgatggtttgtgtaaatctggaaaaatctcttatgctttgaagctagttgatgagatgcatgatagag |
30118725 |
T |
|
| Q |
102 |
gtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaata |
201 |
Q |
| |
|
|||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||| ||| ||| || | ||||| ||||||||||||| |||||| | |
|
|
| T |
30118724 |
gtcagccacctgatataattacttagagttctatattggatgctttatgcaaaaactatcaggttgacaaggcaatcacattattaacaaaattgaaaga |
30118625 |
T |
|
| Q |
202 |
ccacggtatttgaccaaatatgtaca |
227 |
Q |
| |
|
|| || ||| |||||||||||||| |
|
|
| T |
30118624 |
cctgggaattcaaccaaatatgtaca |
30118599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 29897993 - 29898152
Alignment:
| Q |
2 |
attcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagag |
101 |
Q |
| |
|
|||||| ||||| ||||||||| || |||||||||||||||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
29897993 |
attcctgatgtggtaacttacaattctcttatcgatggtttgtgtaaattggggaaattctcttacgcgttgaagctagtcgatgagatgcatgatagag |
29898092 |
T |
|
| Q |
102 |
gtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
161 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
29898093 |
gtcaaccacctaatataattacgtacagttctatattgaatgctttatgcaaaaaccatc |
29898152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30060246 - 30060020
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| ||||| |||| |||| || |||||| |||||| | ||||||| ||||| ||||||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
30060246 |
tattcctgatgtggtaacatacaattcccttattgatggtatctgtaaatcggggaaaatctcttatgctttaaagctagtcgatgagatgaatgataga |
30060147 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||||||| |||| ||||| |||||||| ||||||||| |||||||||| |||||||||| ||| || | |||||||||||||||||||| |||||| |
|
|
| T |
30060146 |
ggtcaactacctgatataattacttacaattctatattaaatgctttatgcaaaaaccatcaggttgacaaggcaattgcattattaacaaaattgaaag |
30060047 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca |
227 |
Q |
| |
|
|||| ||||| |||||||||| |||| |
|
|
| T |
30060046 |
accagggtatccgaccaaatatttaca |
30060020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 238
Target Start/End: Complemental strand, 30062071 - 30061841
Alignment:
| Q |
9 |
atgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaacc |
108 |
Q |
| |
|
||||| || |||||| || |||||| |||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30062071 |
atgtggtagcttacaattcccttattgatggtttttgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagaggtcaacc |
30061972 |
T |
|
| Q |
109 |
acctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaataccacggt |
208 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| ||| ||||| | || || | ||||| |||||||| |||| |||||| | || ||| |
|
|
| T |
30061971 |
acctaatataattacttacaattctatattggatgctttatgcaaacgccatcatcttgacaaggcaatcacattattatcaaaattgaaagatcagggt |
30061872 |
T |
|
| Q |
209 |
atttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
||| ||| ||||| |||| ||||||||||| |
|
|
| T |
30061871 |
attcaaccgaatatttacacatacactattc |
30061841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29366505 - 29366345
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
29366505 |
tattcctgatgtggtaacttacaattcccttattgatggtttgtgtaaattggggaaaatctcttatgctttgaagctagtcgatgagatgcatgataga |
29366406 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
161 |
Q |
| |
|
||| ||||| | ||| | |||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
29366405 |
ggtgtaccacatgataaaattacttacaattctatattggatgctttatgcaaaaaccatc |
29366345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 30127139 - 30126901
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| ||||| ||||||| |||| |||||| |||||||| ||||||| || || ||||||| ||||| |||| |||||| ||||||||||||||||| |
|
|
| T |
30127139 |
tattcctgatgtggtaacttatagttcccttattgatggtttctgtaaatcggagaaaatctctcatgctttgaatctagtcaatgagatgcatgataga |
30127040 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
|||||||||||| ||||| || ||||| ||||||||||||||||||||| |||||||||| ||| || | ||||||||||| ||||| || || ||| |
|
|
| T |
30127039 |
ggtcaaccacctgatataattatttacaattctatattggatgctttatgcaaaaaccatcaggttgacaaagcaattgcattgttaacgaaatttaaaa |
30126940 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| |||||| ||||| | |||||| ||||||||||| |
|
|
| T |
30126939 |
accagggtattcaaccaagtgtgtacacatacactattc |
30126901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29348682 - 29348522
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
29348682 |
tattcctgatgtggtaacttacaattcccttattgatggtttgtgtaaatcagggaaaatctcttatgctttgaagctagtcgatgagatgcatgataga |
29348583 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
161 |
Q |
| |
|
||| ||||| | ||| | |||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
29348582 |
ggtgtaccacatgataaaattacttacaattctatattggatgctttatgcaaaaaccatc |
29348522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 25451035 - 25451181
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
||||| ||||| |||||||||||| |||| | ||||||||||| |||| || |||||| || ||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
25451035 |
ttcctgatgtggtaacttacagttcccttgttgatggtttgtgcaaatcggagagaattcctaatgctttgaagcttgtcgatgagatgcatgatagagg |
25451134 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttat |
149 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25451135 |
tcaaccaccaaatatatttacttacagttctatattggatgctttat |
25451181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 29116176 - 29116420
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| |||| |||||||||||| |||||| |||||||| | |||| ||||||||||| |||||| || |||| |||||| |||||||||||||| |
|
|
| T |
29116176 |
tattcctgatgtcgtaacttacagttcccttattgatggtttaagcaaatcagggagaatctcatatgctttgcagcttgtcgatcagatgcatgataga |
29116275 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||| |||||||| |||| |||||||| ||||||||| ||||||||||| |||| ||||| ||| || | ||||||||||| ||||| || |||||| |
|
|
| T |
29116276 |
ggtgtaccacctactatacgtacttacaattctatattagatgctttatgcaaaatccatcaagttgacaaagcaattgcattgttaacgaaattgaaag |
29116375 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattcatatca |
244 |
Q |
| |
|
|| | |||||| |||||||||||||| ||||| ||||| ||||| |
|
|
| T |
29116376 |
acaagggtattcaaccaaatatgtacacatacagtattcttatca |
29116420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 29882352 - 29882588
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
||||| ||||| ||||||| ||| |||||||||||| ||||| |||| || ||||| || |||||| || | || |||||||||||||||||| |||| |
|
|
| T |
29882352 |
ttcctgatgtgataacttatagtgcccttatcgatggattgtgcaaatctggaagaatatcatatgctttggaacttgtcgatgagatgcatgatcgagg |
29882451 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
202 |
Q |
| |
|
|||| |||| ||||| ||| |||| ||||||||||||||||||||| ||||| |||| |||| || | |||||||||||||||||||| |||||| | |
|
|
| T |
29882452 |
gcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgttgacaaagcaattgcattattaacaaaattgaaaggc |
29882551 |
T |
|
| Q |
203 |
cacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|| |||||| ||||| ||||| ||| ||||||||||| |
|
|
| T |
29882552 |
caaggtattcgaccagatatgaacacatacactattc |
29882588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 29909508 - 29909744
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
||||| ||||| ||||||| ||| |||||||||||| ||||| |||| || ||||| || |||||| || | || |||||||||||||||||| |||| |
|
|
| T |
29909508 |
ttcctgatgtgataacttatagtgcccttatcgatggattgtgcaaatctggaagaatatcatatgctttggaacttgtcgatgagatgcatgatcgagg |
29909607 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
202 |
Q |
| |
|
|||| |||| ||||| ||| |||| ||||||||||||||||||||| ||||| |||| |||| || | |||||||||||||||||||| |||||| | |
|
|
| T |
29909608 |
gcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgttgacaaagcaattgcattattaacaaaattgaaaggc |
29909707 |
T |
|
| Q |
203 |
cacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|| |||||| ||||| ||||| ||| ||||||||||| |
|
|
| T |
29909708 |
caaggtattcgaccagatatgaacacatacactattc |
29909744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 29929190 - 29929426
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
||||| ||||| ||||||| ||| |||||||||||| ||||| |||| ||||||||||| |||||| || |||| |||||| |||||||||||||||| |
|
|
| T |
29929190 |
ttcctgatgtgataacttatagtgcccttatcgatggattgtgcaaatcagggagaatctcatatgctttgcagcttgtcgatcagatgcatgatagagg |
29929289 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
202 |
Q |
| |
|
| | |||||||||||| |||||||| ||||||||| ||||||||||| |||| ||||| ||| || | ||||||||||| ||||| || || ||| || |
|
|
| T |
29929290 |
tgtagcacctaatatagttacttacaattctatattagatgctttatgcaaaacccatcaggttgacaaagcaattgcattgttaacgaaattcaaagac |
29929389 |
T |
|
| Q |
203 |
cacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|| |||||| ||||| | |||||| ||||||||||| |
|
|
| T |
29929390 |
cagggtattcaaccaagtgtgtacacatacactattc |
29929426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 29946354 - 29946543
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
||||||||||| ||||||||| || |||||| |||||||||| | || |||||||||||| |||||| || |||| |||||||| |||||||||||||| |
|
|
| T |
29946354 |
ttcctaatgtggtaacttacaattcccttattaatggtttgtgcagatcggggagaatctcatatgctttggagcttgtcgatgaaatgcatgatagagg |
29946453 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaa |
192 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||| |||||| || ||| || |||| || | ||||||| ||| |||||||| |
|
|
| T |
29946454 |
tcaaccacctaatataattacttacaactctatattggatgttttatgcaagaactatgatgttgacaaggcaattgtatttttaacaaa |
29946543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 24263834 - 24263598
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
||||||||||| ||||||| | || |||||| ||||| ||||| |||| || ||||| || |||||| || | || ||||| |||||||||| |||| |
|
|
| T |
24263834 |
ttcctaatgtgataacttataattcccttattgatggattgtgcaaatctggaagaatatcatatgctttggaacttatcgatttgatgcatgatcgagg |
24263735 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
202 |
Q |
| |
|
|||| |||| ||||| || |||||||||||||||||||| ||||| |||||||||| ||| || | |||||||||||||||| ||| |||||| || |
|
|
| T |
24263734 |
gcaacaacctgatataatcacgtacagttctatattggatgccttatgcaaaaaccatctggttgacaaggcaattgcattattaataaaattgaaagac |
24263635 |
T |
|
| Q |
203 |
cacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|| |||||| ||||||||||||||| ||||||||||| |
|
|
| T |
24263634 |
cagggtattcgaccaaatatgtacacatacactattc |
24263598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 29099258 - 29099446
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| |||| |||||||||||| |||||| |||||||| | |||| ||||||||||| |||||| || |||| |||||| |||||||||||||| |
|
|
| T |
29099258 |
tattcctgatgtcgtaacttacagttcccttattgatggtttaagcaaatcagggagaatctcatatgctttgcagcttgtcgatcagatgcatgataga |
29099357 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaac |
189 |
Q |
| |
|
||| ||||||||||||| |||||||| ||||||||| ||||||||||| |||| ||||| ||| || | ||||||||||| ||||| |
|
|
| T |
29099358 |
ggtgtaccacctaatatatgtacttacaattctatattagatgctttatgcaaaacccatcaagttgacaaagcaattgcattgttaac |
29099446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 24886561 - 24886413
Alignment:
| Q |
89 |
atgcatgatagaggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaa |
188 |
Q |
| |
|
||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||| |||||||||| ||| | |||||||||||||||| |
|
|
| T |
24886561 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattggatgctttatg-aaaaaccatcatgtgacaaaggcaattgcattattaa |
24886463 |
T |
|
| Q |
189 |
caaatttgaaataccacggtatttgaccaaatatgtaca-atacactatt |
237 |
Q |
| |
|
|||| |||||| |||| |||||| ||||| ||||||||| |||||||||| |
|
|
| T |
24886462 |
caaaattgaaagaccagggtattcgaccagatatgtacacatacactatt |
24886413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29084933 - 29085171
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| | ||||||| || ||||| |||||||| | |||| ||||||||||| |||||| || |||| |||||| |||||||||||||| |
|
|
| T |
29084933 |
tattcctaatgtggtgacttacaattctcttattgatggtttaagcaaatcagggagaatctcatatgctttgcagcttgtcgatcagatgcatgataga |
29085032 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
||| ||||||||||||| |||||||| ||||||| | |||||||||| |||| ||||| ||| || | ||||||||||| |||| || || ||| |
|
|
| T |
29085033 |
ggtgtaccacctaatatacttacttacaattctataatagatgctttattcaaaacccatcaagttgacaaagcaattgcattgataacgaaatttaaag |
29085132 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| |||||| ||||| ||||||| ||||||||||| |
|
|
| T |
29085133 |
accagggtattcaaccaagcatgtacacatacactattc |
29085171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 29903240 - 29903383
Alignment:
| Q |
80 |
gtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattg |
179 |
Q |
| |
|
|||||||||||||||||| |||| |||| |||| ||||| ||| |||| ||||||||||||||||||||| ||||| |||| || | | | ||||||| |
|
|
| T |
29903240 |
gtcgatgagatgcatgatcgagggcaacaacctgatataattacctacaattctatattggatgctttatgcaaaaaacatcatgctggcaaagcaattg |
29903339 |
T |
|
| Q |
180 |
cattattaacaaatttgaaataccacggtatttgaccaaatatg |
223 |
Q |
| |
|
| ||||||||||| |||||| |||| |||||| ||||||||||| |
|
|
| T |
29903340 |
cgttattaacaaaattgaaagaccagggtattcgaccaaatatg |
29903383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29889645 - 29889805
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| | ||||||| || ||||| |||||||| | |||| |||| |||||| |||| | || |||| |||||| |||||||||||||| |
|
|
| T |
29889645 |
tattcctaatgtggtgacttacaattctcttattgatggtttaagcaaatcagggataatctcatatgttttgcagcttgtcgatcagatgcatgataga |
29889744 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
161 |
Q |
| |
|
||| |||||||||||||| ||||||| ||||||||| ||||||||||| |||| ||||| |
|
|
| T |
29889745 |
ggtgtaccacctaatatagtcacttacaattctatattagatgctttatgcaaaacccatc |
29889805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 29876757 - 29876894
Alignment:
| Q |
18 |
cttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatat |
117 |
Q |
| |
|
|||| |||| |||||| |||||||| || |||| ||||||||| | | ||| || |||| || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
29876757 |
cttatagttcccttattgatggtttttgcaaatcggggagaattccacaggctttggagcttgttgatgagatgcatgatagaggccaaccacctaatat |
29876856 |
T |
|
| Q |
118 |
agatacttacagttctatattggatgctttatgtaaaa |
155 |
Q |
| |
|
| |||||||| |||||||||| |||||||||| |||| |
|
|
| T |
29876857 |
aattacttacaattctatattgtatgctttatgcaaaa |
29876894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 24272029 - 24271871
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
||||||||||| ||||||| |||| |||||| ||||| ||||| |||| || ||||| || |||||| || | || |||||||||||||||| |||| |
|
|
| T |
24272029 |
ttcctaatgtgataacttatagttcccttattgatggattgtgcaaatctggaagaatatcatatgctttggaacttaacgatgagatgcatgatcgagg |
24271930 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
161 |
Q |
| |
|
|||| |||| ||||| || ||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
24271929 |
gcaacaacctgatataatcacgtacagttctatattggatgatttatgcaaaaaccatc |
24271871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 30135122 - 30135200
Alignment:
| Q |
83 |
gatgagatgcatgatagaggtcaaccacctaatatagat-acttacagttctatattggatgctttatgtaaaaaccatc |
161 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| | ||| ||||||| |||| ||||||||||||| || |||||||||| |
|
|
| T |
30135122 |
gatgagatgcatgaaagaggtcaacctgctaatgt-gatcacttacaattctttattggatgctttgtgcaaaaaccatc |
30135200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 16702153 - 16702057
Alignment:
| Q |
87 |
agatgcatgatagaggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcatt |
183 |
Q |
| |
|
|||||| ||||||||| ||||| || ||| || ||||||| ||| |||| ||||||||||||||||||||| |||| || | ||||||||||| |
|
|
| T |
16702153 |
agatgcgtgatagaggccaacctcccaatgtaatcacttacaattccttattacatgctttatgtaaaaaccatcatgttgacaaggcaattgcatt |
16702057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0573 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0573
Description:
Target: scaffold0573; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4052 - 4290
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4052 |
tattcctaatgtggtaacttacaattcccttatcgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgataga |
4151 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaat |
200 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||| | | || | |||||||||||||||||||| |||||| |
|
|
| T |
4152 |
ggtcaaccacctgatataattacttacagttctctattggatgctttatgcaaaaaccatccaggtgacaaggcaattgcattattaacaaaattgaaag |
4251 |
T |
|
| Q |
201 |
accacggtatttgaccaaatatgtaca-atacactattc |
238 |
Q |
| |
|
|||| ||| || |||||||||||||| ||||||||||| |
|
|
| T |
4252 |
accagggtcttcaaccaaatatgtacacatacactattc |
4290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 53680 - 53532
Alignment:
| Q |
1 |
tattcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgataga |
100 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||| |||||||||||||||| ||||| ||| ||||||||| | |||||||| ||||||||||||||||| |
|
|
| T |
53680 |
tattcctgatgtggtaacttacaattcccttattgatggtttgtgtaaatcggggaaaatatcttatgctttccagctagtcaatgagatgcatgataga |
53581 |
T |
|
| Q |
101 |
ggtcaaccacctaatatagatacttacagttctatattggatgctttat |
149 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
53580 |
ggtcaaccacctaatataattacttacaattctatattaaatgctttat |
53532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 24219292 - 24219128
Alignment:
| Q |
28 |
ccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttac |
127 |
Q |
| |
|
|||||| ||||||||||| |||| ||| |||||||| |||||| |||| || ||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
24219292 |
ccttattgatggtttgtgcaaatcgggaagaatctcatatgctttgaaacttatcggagagatgcatgatagaggtcaaccacctaatataattacttac |
24219193 |
T |
|
| Q |
128 |
agttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaa |
192 |
Q |
| |
|
| |||| |||||||||||||||| |||||||||| |||| || | ||||||| ||| |||||||| |
|
|
| T |
24219192 |
aattctttattggatgctttatgcaaaaaccatcatgttgacaaggcaattgaattgttaacaaa |
24219128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 184
Target Start/End: Original strand, 11991261 - 11991410
Alignment:
| Q |
35 |
gatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttcta |
134 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||| | |||| || ||||| |||||||||| ||||||||| | |||||| ||||||| | | |
|
|
| T |
11991261 |
gatggtttgtgcaaatcagggagaatctcctatgcttgggagcttgttgatgaaatgcatgataatggtcaaccagccaatatattcacttacaactgtt |
11991360 |
T |
|
| Q |
135 |
tattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcatta |
184 |
Q |
| |
|
|| | |||||||||||||||||||||| |||| |||| || ||||||||| |
|
|
| T |
11991361 |
taatagatgctttatgtaaaaaccatcatgttgaccaggctattgcatta |
11991410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 24226819 - 24226895
Alignment:
| Q |
85 |
tgagatgcatgatagaggtcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatc |
161 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||| ||||||| |||| |||| |||| || || |||||||||| |
|
|
| T |
24226819 |
tgagatgcatgatagaggtcaaccagctaacataatcacttacaattctttattagatggattgtgcaaaaaccatc |
24226895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 22260 - 22480
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
||||| ||||| ||||||| |||| |||||||||||| ||||| |||| || ||||| || |||||| || | || ||||||||||||||| || |||| |
|
|
| T |
22260 |
ttcctgatgtgataacttatagttcccttatcgatggattgtgcaaatctggaagaatatcatatgctttggaacttgtcgatgagatgcattatcgagg |
22359 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaatttgaaatac |
202 |
Q |
| |
|
|||| |||| ||||| |||||||| ||||||||||||||||||||| ||||| |||| ||| || | |||||| ||||||||||||| |||||| | |
|
|
| T |
22360 |
gcaacaacctgatataattacttacaattctatattggatgctttatgcaaaaaacatcatgtggacaaagcaattacattattaacaaaattgaaaggc |
22459 |
T |
|
| Q |
203 |
cacggtatttgaccaaatatg |
223 |
Q |
| |
|
|| |||||| ||||| ||||| |
|
|
| T |
22460 |
caaggtattcgaccagatatg |
22480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 15062958 - 15062769
Alignment:
| Q |
3 |
ttcctaatgtgttaacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagagg |
102 |
Q |
| |
|
|||| |||||| ||||||||| || |||| | |||||||||||||||| || |||| ||| | |||| || |||| |||||||| |||||||||||||| |
|
|
| T |
15062958 |
ttccaaatgtggtaacttacaattcccttgttgatggtttgtgtaaatctggaagaacctcgtgtgctttggagcttgtcgatgaaatgcatgatagagg |
15062859 |
T |
|
| Q |
103 |
tcaaccacctaatatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcattattaacaaa |
192 |
Q |
| |
|
||||||| |||||||| |||||||| ||||||||| |||||| |||| |||||| ||| |||| | | ||||||| ||||||||||| |
|
|
| T |
15062858 |
tcaaccatctaatataattacttacaattctatattagatgctatatgcaaaaacaatcatgttgataaggcaattgtgttattaacaaa |
15062769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 104808 - 104666
Alignment:
| Q |
15 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
114 |
Q |
| |
|
|||||||||||| || || ||||||||||| |||| |||||| |||||| |||| | |||| || ||||||||||||| || |||||||||||||| |
|
|
| T |
104808 |
taacttacagttctctcattgatggtttgtgcaaatctgggagattctcttgtgcttgggagcttgtggatgagatgcatgttaatggtcaaccacctaa |
104709 |
T |
|
| Q |
115 |
tatagatacttacagttctatattggatgctttatgtaaaaac |
157 |
Q |
| |
|
||| ||||||||||||| || | ||||||||||| |||||| |
|
|
| T |
104708 |
catatttacttacagttctttaatagatgctttatgcaaaaac |
104666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 137323 - 137445
Alignment:
| Q |
35 |
gatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttcta |
134 |
Q |
| |
|
||||||||||| |||| || |||||||| ||||| |||||| |||||||||||||||| || |||||||||||| | ||| ||| ||||||||| |
|
|
| T |
137323 |
gatggtttgtgcaaatcaggtagaatctcccatgcttggaagcttgtcgatgagatgcatgttaatggtcaaccacctgacatatttacctacagttctt |
137422 |
T |
|
| Q |
135 |
tattggatgctttatgtaaaaac |
157 |
Q |
| |
|
|| | ||||||||||| |||||| |
|
|
| T |
137423 |
taatagatgctttatgcaaaaac |
137445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 121550 - 121457
Alignment:
| Q |
15 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaacc |
108 |
Q |
| |
|
|||||||||||| ||||| |||| |||||| |||| |||||||||||| |||| | |||| | ||| |||||||||||||||||||||| |
|
|
| T |
121550 |
taacttacagttctcttattgatgctttgtgcaaatcagggagaatctctcatgcatgggagcttcttgatcagatgcatgatagaggtcaacc |
121457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0572 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0572
Description:
Target: scaffold0572; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 184
Target Start/End: Original strand, 3182 - 3331
Alignment:
| Q |
35 |
gatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttacagttcta |
134 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||| | |||| || |||||||||| |||||| ||||||||| || ||||| ||||||| ||| |
|
|
| T |
3182 |
gatggtttgtgcaaatctgggagaatctcctatgcttgggagcttgttgatgagatgcgtgatagtggtcaaccagctgatataatcacttacaattcat |
3281 |
T |
|
| Q |
135 |
tattggatgctttatgtaaaaaccatcgtgtttaccacgcaattgcatta |
184 |
Q |
| |
|
|| | ||||||||||| |||||||||| |||| || | || ||||||||| |
|
|
| T |
3282 |
taatagatgctttatgcaaaaaccatcatgttgacaaggctattgcatta |
3331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 4260374 - 4260242
Alignment:
| Q |
28 |
ccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttac |
127 |
Q |
| |
|
|||||| ||||||||||| |||| |||||| | || |||||| || | || || ||||| ||| ||||||||||| |||||||||||||| |||||| |
|
|
| T |
4260374 |
ccttattgatggtttgtgcaaatccgggagattatcatatgctatggaacttgttgatgaaatggatgatagaggtgaaccacctaatataattacttat |
4260275 |
T |
|
| Q |
128 |
agttctatattggatgctttatgtaaaaaccat |
160 |
Q |
| |
|
|| ||||| |||||| |||||| ||||||||| |
|
|
| T |
4260274 |
tgtcctatagtggatgttttatgcaaaaaccat |
4260242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 4263996 - 4263864
Alignment:
| Q |
28 |
ccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaatatagatacttac |
127 |
Q |
| |
|
|||||| ||||||||||| |||| |||||| | || |||||| || | || || ||||| ||| ||||||||||| |||||||||||||| |||||| |
|
|
| T |
4263996 |
ccttattgatggtttgtgcaaatccgggagattatcatatgctatggaacttgttgatgaaatggatgatagaggtgaaccacctaatataattacttat |
4263897 |
T |
|
| Q |
128 |
agttctatattggatgctttatgtaaaaaccat |
160 |
Q |
| |
|
|| ||||| |||||| |||||| ||||||||| |
|
|
| T |
4263896 |
tgtcctatagtggatgttttatgcaaaaaccat |
4263864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 10130066 - 10130201
Alignment:
| Q |
15 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
114 |
Q |
| |
|
||||||| |||| |||||| ||||| ||||| |||| ||||||||||| ||||| | | || || ||||||| |||||||||||||| |||||| |
|
|
| T |
10130066 |
taacttatagttcccttattgatggcttgtgcaaatcagggagaatctcagatgcttgggaacttgtaagtgagatgtctgatagaggtcaacaacctaa |
10130165 |
T |
|
| Q |
115 |
tatagatacttacagttctatattggatgctttatg |
150 |
Q |
| |
|
|||| |||||||| |||| ||||| |||||||||| |
|
|
| T |
10130166 |
tataattacttacaattctttattgaatgctttatg |
10130201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 17251310 - 17251342
Alignment:
| Q |
83 |
gatgagatgcatgatagaggtcaaccacctaat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
17251310 |
gatgagatgcatgatagaggtcaaccacctaat |
17251342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0429
Description:
Target: scaffold0429; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 6125 - 6276
Alignment:
| Q |
15 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
114 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||| || |||||||| |||||| | || | || |||||||||| ||||| |||||||||||| | |
|
|
| T |
6125 |
taacttacagttctctcattgatggtttgtgtaaattaggtagaatctcctatgcttgggagtttgttgatgagatgcgtgataatggtcaaccacctga |
6224 |
T |
|
| Q |
115 |
tatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtt |
166 |
Q |
| |
|
||| ||||||| |||| || | ||||| ||||| |||||||||| |||| |
|
|
| T |
6225 |
catatgcacttacaattctttaatagatgcattatgcaaaaaccatcatgtt |
6276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 43355 - 43199
Alignment:
| Q |
15 |
taacttacagtttccttatcgatggtttgtgtaaattggggagaatctcttatgctctgaagctagtcgatgagatgcatgatagaggtcaaccacctaa |
114 |
Q |
| |
|
|||||||||||| || || ||||||||||| ||||| || |||||||| |||||| | |||| || |||||||||| ||| | ||||||| |||| | |
|
|
| T |
43355 |
taacttacagttctctcattgatggtttgtgcaaattaggtagaatctcctatgcttgggagcttgttgatgagatgcgtgacaatggtcaacaacctga |
43256 |
T |
|
| Q |
115 |
tatagatacttacagttctatattggatgctttatgtaaaaaccatcgtgtttacca |
171 |
Q |
| |
|
||| ||||||| |||| || | ||||| ||||| |||||||||| |||| |||| |
|
|
| T |
43255 |
catatgcacttacaattctttaatagatgcattatgcaaaaaccatcatgttgacca |
43199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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