View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3854_low_2 (Length: 870)

Name: NF3854_low_2
Description: NF3854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3854_low_2
NF3854_low_2
[»] chr5 (62 HSPs)
chr5 (225-846)||(33816786-33817410)
chr5 (19-230)||(33807426-33807638)
chr5 (196-342)||(33818560-33818706)
chr5 (194-341)||(23423753-23423900)
chr5 (196-342)||(618288-618434)
chr5 (196-342)||(16121838-16121984)
chr5 (196-322)||(25397787-25397913)
chr5 (195-342)||(35620342-35620488)
chr5 (196-336)||(17039630-17039770)
chr5 (197-342)||(2472714-2472859)
chr5 (197-342)||(8886851-8886996)
chr5 (196-342)||(12328225-12328371)
chr5 (207-341)||(23975630-23975764)
chr5 (197-342)||(8108860-8109005)
chr5 (197-342)||(12045721-12045866)
chr5 (197-342)||(25652583-25652728)
chr5 (197-342)||(36196388-36196533)
chr5 (207-322)||(746878-746993)
chr5 (207-342)||(15060967-15061102)
chr5 (197-342)||(7888791-7888936)
chr5 (196-342)||(25673228-25673373)
chr5 (196-341)||(13620126-13620271)
chr5 (196-341)||(20959503-20959648)
chr5 (197-322)||(38837671-38837796)
chr5 (207-342)||(17986723-17986858)
chr5 (196-322)||(10494751-10494877)
chr5 (196-326)||(24138840-24138970)
chr5 (207-341)||(27428022-27428156)
chr5 (195-341)||(28265473-28265619)
chr5 (196-336)||(7003729-7003867)
chr5 (197-342)||(11927786-11927931)
chr5 (197-326)||(26708585-26708714)
chr5 (197-326)||(26978319-26978448)
chr5 (197-322)||(36597340-36597465)
chr5 (197-342)||(36831890-36832035)
chr5 (197-336)||(23408980-23409120)
chr5 (197-342)||(5982639-5982785)
chr5 (196-342)||(17036411-17036557)
chr5 (197-322)||(16631874-16631999)
chr5 (197-341)||(20187941-20188085)
chr5 (201-342)||(3080700-3080841)
chr5 (197-322)||(4125188-4125313)
chr5 (212-341)||(10420267-10420396)
chr5 (197-342)||(13974078-13974223)
chr5 (198-322)||(17771969-17772093)
chr5 (198-342)||(33734974-33735117)
chr5 (239-342)||(17079399-17079502)
chr5 (206-336)||(32726735-32726865)
chr5 (196-322)||(40484058-40484184)
chr5 (197-342)||(36716200-36716345)
chr5 (196-324)||(23974575-23974703)
chr5 (207-322)||(35778155-35778270)
chr5 (227-342)||(18413550-18413665)
chr5 (219-317)||(31853109-31853208)
chr5 (227-322)||(9024227-9024323)
chr5 (198-341)||(16472182-16472325)
chr5 (274-341)||(22649406-22649473)
chr5 (279-342)||(29727928-29727991)
chr5 (227-330)||(5043541-5043644)
chr5 (279-322)||(16464692-16464735)
chr5 (197-242)||(16464723-16464768)
chr5 (254-322)||(18264664-18264730)
[»] chr7 (64 HSPs)
chr7 (196-341)||(39979623-39979768)
chr7 (196-342)||(40847434-40847580)
chr7 (214-342)||(36636500-36636628)
chr7 (197-342)||(23232033-23232178)
chr7 (197-342)||(28800872-28801017)
chr7 (196-322)||(1824199-1824325)
chr7 (196-342)||(15014404-15014550)
chr7 (197-342)||(22486388-22486533)
chr7 (197-342)||(36993814-36993959)
chr7 (196-322)||(4514779-4514905)
chr7 (196-322)||(26577279-26577405)
chr7 (197-342)||(27806012-27806157)
chr7 (197-342)||(31425511-31425656)
chr7 (197-336)||(21917334-21917473)
chr7 (204-342)||(20174014-20174152)
chr7 (197-342)||(1907349-1907494)
chr7 (197-342)||(7733312-7733457)
chr7 (213-342)||(47523666-47523795)
chr7 (203-342)||(2457664-2457801)
chr7 (197-341)||(23577189-23577333)
chr7 (198-342)||(24140444-24140588)
chr7 (197-336)||(18217829-18217968)
chr7 (194-332)||(1842898-1843036)
chr7 (196-342)||(48933130-48933276)
chr7 (196-336)||(11036507-11036647)
chr7 (196-342)||(37135284-37135430)
chr7 (197-342)||(24605832-24605977)
chr7 (190-342)||(20429459-20429611)
chr7 (197-336)||(23750736-23750875)
chr7 (196-336)||(9698537-9698677)
chr7 (195-322)||(3904476-3904603)
chr7 (197-336)||(6849211-6849350)
chr7 (227-342)||(10050866-10050981)
chr7 (197-322)||(3872187-3872312)
chr7 (227-336)||(45664768-45664877)
chr7 (207-323)||(11852021-11852137)
chr7 (207-342)||(816201-816336)
chr7 (207-342)||(38057626-38057761)
chr7 (196-342)||(42926418-42926565)
chr7 (196-330)||(14786634-14786768)
chr7 (197-342)||(20923958-20924103)
chr7 (197-326)||(21623031-21623159)
chr7 (197-342)||(23699825-23699970)
chr7 (203-336)||(27304872-27305003)
chr7 (213-342)||(31042245-31042374)
chr7 (197-320)||(23539248-23539371)
chr7 (195-322)||(33427704-33427830)
chr7 (211-342)||(22501588-22501719)
chr7 (196-318)||(2650827-2650949)
chr7 (211-333)||(32267350-32267471)
chr7 (197-324)||(15969796-15969924)
chr7 (197-342)||(21871566-21871707)
chr7 (227-342)||(11890177-11890292)
chr7 (197-322)||(1821996-1822118)
chr7 (195-341)||(27130329-27130473)
chr7 (207-342)||(26415418-26415553)
chr7 (213-342)||(25777128-25777257)
chr7 (206-304)||(1841792-1841889)
chr7 (197-263)||(38090336-38090402)
chr7 (197-322)||(2093362-2093487)
chr7 (248-341)||(15330256-15330349)
chr7 (197-341)||(10222630-10222773)
chr7 (198-342)||(27132722-27132866)
chr7 (259-342)||(687871-687954)
[»] chr6 (81 HSPs)
chr6 (196-342)||(22083832-22083978)
chr6 (197-342)||(12951702-12951847)
chr6 (197-342)||(18033526-18033670)
chr6 (197-342)||(2992609-2992754)
chr6 (197-342)||(9892957-9893102)
chr6 (196-341)||(11530220-11530365)
chr6 (207-322)||(11077663-11077778)
chr6 (195-342)||(15364456-15364603)
chr6 (191-342)||(24661003-24661154)
chr6 (196-342)||(22579348-22579494)
chr6 (196-342)||(28364905-28365051)
chr6 (197-342)||(6598458-6598603)
chr6 (196-342)||(6978273-6978417)
chr6 (203-322)||(14872133-14872252)
chr6 (207-341)||(25397997-25398131)
chr6 (197-342)||(26224422-26224567)
chr6 (197-336)||(495627-495766)
chr6 (207-342)||(12200688-12200823)
chr6 (207-342)||(14886555-14886690)
chr6 (196-342)||(11049750-11049896)
chr6 (197-342)||(26939581-26939726)
chr6 (196-342)||(1939241-1939387)
chr6 (197-341)||(18048783-18048927)
chr6 (207-342)||(21140933-21141068)
chr6 (215-341)||(12844998-12845124)
chr6 (197-307)||(14772690-14772800)
chr6 (204-342)||(22055619-22055757)
chr6 (212-342)||(33250723-33250853)
chr6 (197-342)||(2669303-2669448)
chr6 (197-342)||(20182139-20182284)
chr6 (195-336)||(21990173-21990313)
chr6 (197-342)||(22153707-22153852)
chr6 (197-341)||(12351586-12351730)
chr6 (198-342)||(27796835-27796979)
chr6 (197-322)||(6605496-6605621)
chr6 (197-326)||(15448395-15448524)
chr6 (239-342)||(27705416-27705519)
chr6 (197-342)||(9885237-9885382)
chr6 (197-341)||(16250802-16250946)
chr6 (221-341)||(23281781-23281901)
chr6 (198-317)||(5360428-5360547)
chr6 (207-342)||(18492363-18492498)
chr6 (197-336)||(30833960-30834099)
chr6 (196-322)||(28668114-28668240)
chr6 (203-322)||(11350196-11350312)
chr6 (207-322)||(5192199-5192314)
chr6 (196-322)||(6065451-6065577)
chr6 (196-342)||(9060085-9060230)
chr6 (196-342)||(12160846-12160991)
chr6 (207-342)||(21691505-21691641)
chr6 (207-322)||(12499230-12499345)
chr6 (207-322)||(12506559-12506674)
chr6 (207-322)||(12509556-12509671)
chr6 (248-342)||(14036614-14036708)
chr6 (196-322)||(15961406-15961532)
chr6 (196-342)||(16118140-16118286)
chr6 (197-342)||(17919530-17919675)
chr6 (203-322)||(1954895-1955013)
chr6 (239-322)||(13145016-13145099)
chr6 (207-306)||(15509186-15509285)
chr6 (239-322)||(33547560-33547643)
chr6 (227-341)||(343593-343707)
chr6 (207-341)||(12680195-12680328)
chr6 (207-335)||(12157386-12157514)
chr6 (248-342)||(19175828-19175921)
chr6 (197-317)||(12205185-12205305)
chr6 (198-293)||(10458807-10458902)
chr6 (196-318)||(10929495-10929618)
chr6 (197-322)||(20692811-20692936)
chr6 (192-341)||(11431634-11431784)
chr6 (227-341)||(5270387-5270502)
chr6 (196-280)||(5250195-5250279)
chr6 (248-295)||(3673184-3673231)
chr6 (198-281)||(28221647-28221730)
chr6 (198-285)||(28234036-28234123)
chr6 (196-333)||(30745718-30745853)
chr6 (196-280)||(8844167-8844252)
chr6 (254-322)||(16764825-16764893)
chr6 (197-279)||(9878515-9878596)
chr6 (258-336)||(33636980-33637058)
chr6 (196-312)||(7000881-7000998)
[»] chr3 (90 HSPs)
chr3 (197-335)||(19610335-19610473)
chr3 (197-342)||(16299851-16299996)
chr3 (197-342)||(29215982-29216127)
chr3 (196-342)||(30219328-30219474)
chr3 (196-322)||(15063991-15064117)
chr3 (196-342)||(19269863-19270009)
chr3 (195-336)||(25882566-25882707)
chr3 (196-342)||(18104529-18104675)
chr3 (197-322)||(5744426-5744551)
chr3 (197-322)||(5781385-5781510)
chr3 (197-342)||(27449078-27449223)
chr3 (197-342)||(49915441-49915586)
chr3 (197-336)||(5260933-5261072)
chr3 (197-342)||(21020055-21020200)
chr3 (197-306)||(37283549-37283658)
chr3 (198-342)||(11915748-11915892)
chr3 (207-342)||(18091557-18091692)
chr3 (197-336)||(19223445-19223584)
chr3 (196-342)||(8110329-8110475)
chr3 (212-342)||(17762632-17762762)
chr3 (212-342)||(19063952-19064082)
chr3 (196-342)||(26390633-26390779)
chr3 (213-342)||(8428161-8428290)
chr3 (197-322)||(26098823-26098948)
chr3 (197-326)||(48404866-48404995)
chr3 (197-322)||(50665636-50665761)
chr3 (197-341)||(11007683-11007827)
chr3 (195-342)||(9652568-9652715)
chr3 (207-342)||(18539794-18539929)
chr3 (196-326)||(13921331-13921461)
chr3 (197-342)||(26830441-26830587)
chr3 (197-342)||(29956362-29956507)
chr3 (197-342)||(30005517-30005662)
chr3 (196-335)||(1310958-1311097)
chr3 (207-342)||(4393360-4393495)
chr3 (197-324)||(10941665-10941792)
chr3 (227-342)||(17582331-17582446)
chr3 (197-326)||(21816727-21816856)
chr3 (197-326)||(29236050-29236179)
chr3 (197-342)||(36543739-36543884)
chr3 (196-326)||(21088758-21088886)
chr3 (207-341)||(1628206-1628340)
chr3 (196-322)||(13905037-13905163)
chr3 (207-341)||(28389964-28390098)
chr3 (197-322)||(3461310-3461435)
chr3 (197-342)||(7623531-7623676)
chr3 (227-336)||(19545506-19545615)
chr3 (196-333)||(46942486-46942623)
chr3 (197-333)||(31250087-31250223)
chr3 (207-322)||(1745498-1745612)
chr3 (197-336)||(11219134-11219273)
chr3 (197-332)||(11837214-11837349)
chr3 (196-334)||(27182657-27182793)
chr3 (207-342)||(29704042-29704177)
chr3 (207-342)||(31433727-31433862)
chr3 (196-322)||(5565732-5565858)
chr3 (197-322)||(23773487-23773612)
chr3 (197-342)||(36564439-36564584)
chr3 (197-322)||(43329763-43329888)
chr3 (197-322)||(46012728-46012853)
chr3 (197-341)||(8543460-8543603)
chr3 (198-342)||(27968905-27969049)
chr3 (207-342)||(23217218-23217353)
chr3 (196-342)||(11085341-11085487)
chr3 (196-336)||(10803716-10803857)
chr3 (213-326)||(28859597-28859710)
chr3 (197-326)||(47263265-47263394)
chr3 (227-342)||(27212811-27212926)
chr3 (207-312)||(8546265-8546370)
chr3 (197-322)||(17269604-17269729)
chr3 (197-342)||(18380014-18380159)
chr3 (227-319)||(6718723-6718815)
chr3 (197-322)||(21490034-21490159)
chr3 (197-292)||(20761950-20762045)
chr3 (196-342)||(6447245-6447391)
chr3 (207-341)||(15490026-15490159)
chr3 (197-322)||(6088228-6088353)
chr3 (196-334)||(20088398-20088541)
chr3 (207-342)||(29451084-29451219)
chr3 (197-326)||(10772053-10772183)
chr3 (196-342)||(20615344-20615488)
chr3 (227-322)||(50240756-50240851)
chr3 (248-322)||(23233214-23233288)
chr3 (207-332)||(26963259-26963384)
chr3 (196-314)||(13615433-13615551)
chr3 (208-326)||(45304340-45304458)
chr3 (277-326)||(35579605-35579654)
chr3 (266-314)||(27711237-27711285)
chr3 (196-232)||(23233183-23233219)
chr3 (369-436)||(3564856-3564923)
[»] chr2 (55 HSPs)
chr2 (197-342)||(30783328-30783473)
chr2 (197-342)||(41637608-41637753)
chr2 (197-342)||(31266344-31266489)
chr2 (196-342)||(27327606-27327752)
chr2 (197-342)||(29749403-29749548)
chr2 (196-342)||(28841341-28841487)
chr2 (207-342)||(32300441-32300576)
chr2 (198-331)||(28319580-28319713)
chr2 (207-342)||(1141526-1141661)
chr2 (207-342)||(15636745-15636880)
chr2 (207-342)||(18551263-18551398)
chr2 (196-342)||(13788054-13788200)
chr2 (195-336)||(32008948-32009090)
chr2 (197-342)||(20065074-20065219)
chr2 (197-342)||(22140364-22140509)
chr2 (197-342)||(41736162-41736307)
chr2 (198-341)||(23388379-23388522)
chr2 (196-342)||(14757120-14757266)
chr2 (196-322)||(43408510-43408636)
chr2 (204-342)||(44366004-44366142)
chr2 (197-342)||(21293711-21293856)
chr2 (197-342)||(32185822-32185967)
chr2 (208-342)||(26687701-26687836)
chr2 (207-341)||(37724002-37724136)
chr2 (196-334)||(44722930-44723068)
chr2 (197-342)||(8430286-8430431)
chr2 (197-326)||(12779606-12779735)
chr2 (197-326)||(37552233-37552362)
chr2 (206-342)||(18916410-18916545)
chr2 (207-341)||(28262355-28262489)
chr2 (197-326)||(23857958-23858086)
chr2 (197-322)||(44476375-44476500)
chr2 (207-330)||(13613103-13613226)
chr2 (259-342)||(27523001-27523084)
chr2 (197-322)||(7093578-7093703)
chr2 (196-336)||(18609510-18609650)
chr2 (195-322)||(26243319-26243446)
chr2 (197-292)||(27039908-27040003)
chr2 (197-336)||(37802379-37802517)
chr2 (197-342)||(40018792-40018937)
chr2 (195-342)||(36373890-36374035)
chr2 (196-324)||(36550844-36550971)
chr2 (205-312)||(35697475-35697582)
chr2 (207-322)||(38362281-38362396)
chr2 (207-342)||(2556085-2556220)
chr2 (203-326)||(8763640-8763763)
chr2 (223-341)||(13134646-13134764)
chr2 (248-342)||(9004359-9004453)
chr2 (271-341)||(29998633-29998703)
chr2 (197-342)||(22192182-22192314)
chr2 (227-320)||(31966555-31966647)
chr2 (214-341)||(9590461-9590588)
chr2 (197-279)||(16098917-16098999)
chr2 (288-342)||(27058407-27058461)
chr2 (245-336)||(13436685-13436776)
[»] scaffold0047 (1 HSPs)
scaffold0047 (197-341)||(58577-58721)
[»] scaffold0058 (1 HSPs)
scaffold0058 (196-342)||(74540-74686)
[»] chr1 (75 HSPs)
chr1 (196-342)||(50845329-50845475)
chr1 (197-342)||(13102310-13102455)
chr1 (196-342)||(14760861-14761007)
chr1 (197-341)||(7830026-7830170)
chr1 (197-341)||(12720804-12720948)
chr1 (194-342)||(6459211-6459359)
chr1 (197-342)||(9109975-9110120)
chr1 (197-342)||(45839286-45839431)
chr1 (197-342)||(41752427-41752572)
chr1 (196-342)||(6412052-6412198)
chr1 (203-336)||(16913583-16913716)
chr1 (207-342)||(22158796-22158931)
chr1 (196-326)||(4340417-4340547)
chr1 (196-342)||(15243079-15243225)
chr1 (196-342)||(18894899-18895045)
chr1 (197-342)||(20408160-20408305)
chr1 (196-341)||(38531169-38531314)
chr1 (197-342)||(52183672-52183817)
chr1 (207-342)||(9464097-9464232)
chr1 (197-342)||(17661044-17661189)
chr1 (213-342)||(22789607-22789736)
chr1 (196-332)||(46339444-46339580)
chr1 (196-322)||(19865258-19865384)
chr1 (196-342)||(23457891-23458037)
chr1 (196-322)||(28229454-28229580)
chr1 (196-326)||(41120736-41120866)
chr1 (196-322)||(46790014-46790140)
chr1 (197-342)||(12161808-12161953)
chr1 (197-342)||(22603542-22603687)
chr1 (222-342)||(41071860-41071980)
chr1 (197-341)||(48522513-48522657)
chr1 (227-334)||(12174796-12174903)
chr1 (207-342)||(19081722-19081857)
chr1 (207-342)||(19129610-19129745)
chr1 (197-336)||(29549418-29549557)
chr1 (200-326)||(46785961-46786087)
chr1 (196-336)||(7181554-7181694)
chr1 (197-341)||(18890549-18890693)
chr1 (207-342)||(12989846-12989981)
chr1 (196-342)||(17200009-17200155)
chr1 (204-342)||(30928385-30928523)
chr1 (196-342)||(46865237-46865383)
chr1 (197-327)||(50092298-50092428)
chr1 (197-342)||(9985327-9985472)
chr1 (197-322)||(13308820-13308945)
chr1 (198-342)||(17733954-17734099)
chr1 (195-342)||(41063191-41063338)
chr1 (198-336)||(9259184-9259322)
chr1 (196-342)||(11917780-11917925)
chr1 (197-322)||(12806836-12806963)
chr1 (239-342)||(13523003-13523106)
chr1 (198-305)||(25787998-25788105)
chr1 (197-322)||(8940994-8941119)
chr1 (197-326)||(9177110-9177239)
chr1 (227-336)||(32046876-32046985)
chr1 (196-332)||(51973428-51973564)
chr1 (196-342)||(13195577-13195723)
chr1 (259-342)||(12370003-12370086)
chr1 (207-342)||(20290331-20290465)
chr1 (196-295)||(27253854-27253953)
chr1 (233-322)||(41359001-41359091)
chr1 (203-342)||(16258492-16258631)
chr1 (207-341)||(20580904-20581039)
chr1 (196-341)||(29093553-29093698)
chr1 (197-326)||(39748943-39749072)
chr1 (207-342)||(18787923-18788055)
chr1 (207-330)||(26825246-26825369)
chr1 (197-322)||(49881058-49881182)
chr1 (207-342)||(6775881-6776015)
chr1 (203-321)||(45918910-45919028)
chr1 (227-322)||(9882070-9882162)
chr1 (270-342)||(14486705-14486777)
chr1 (204-326)||(30673504-30673624)
chr1 (274-342)||(52621148-52621216)
chr1 (272-327)||(25687355-25687410)
[»] chr4 (63 HSPs)
chr4 (197-342)||(5399601-5399746)
chr4 (197-342)||(33914051-33914196)
chr4 (206-342)||(25147713-25147849)
chr4 (197-319)||(9058952-9059074)
chr4 (196-336)||(32175736-32175876)
chr4 (196-342)||(55309211-55309358)
chr4 (196-342)||(22128311-22128457)
chr4 (196-342)||(46286228-46286374)
chr4 (197-342)||(1638439-1638584)
chr4 (213-342)||(2275694-2275823)
chr4 (197-342)||(22168260-22168405)
chr4 (197-336)||(27040025-27040164)
chr4 (207-342)||(37378633-37378768)
chr4 (197-342)||(19839171-19839316)
chr4 (195-336)||(45532577-45532718)
chr4 (197-336)||(5473847-5473986)
chr4 (207-342)||(8878875-8879010)
chr4 (207-342)||(18051831-18051966)
chr4 (196-326)||(4586757-4586887)
chr4 (196-341)||(12071955-12072100)
chr4 (196-336)||(13564914-13565054)
chr4 (195-341)||(44783475-44783622)
chr4 (196-342)||(19680423-19680569)
chr4 (248-342)||(22156652-22156746)
chr4 (196-326)||(25026565-25026695)
chr4 (197-322)||(9670479-9670604)
chr4 (197-322)||(30507999-30508124)
chr4 (213-342)||(38223502-38223631)
chr4 (207-322)||(29625337-29625452)
chr4 (196-326)||(13028815-13028945)
chr4 (196-342)||(30268987-30269133)
chr4 (196-342)||(30283056-30283202)
chr4 (197-326)||(18714910-18715039)
chr4 (198-342)||(24682328-24682470)
chr4 (197-322)||(38645762-38645887)
chr4 (196-342)||(16915361-16915507)
chr4 (196-322)||(38619859-38619985)
chr4 (197-322)||(7111946-7112071)
chr4 (213-342)||(9913250-9913379)
chr4 (207-319)||(9238635-9238747)
chr4 (196-322)||(4606828-4606954)
chr4 (207-341)||(36689670-36689804)
chr4 (197-341)||(3612988-3613133)
chr4 (213-322)||(9239297-9239406)
chr4 (197-322)||(12105995-12106119)
chr4 (197-326)||(54539294-54539423)
chr4 (198-342)||(29238415-29238559)
chr4 (227-342)||(18744100-18744215)
chr4 (207-342)||(30568009-30568144)
chr4 (197-342)||(30420033-30420178)
chr4 (197-294)||(42055437-42055534)
chr4 (198-326)||(4627079-4627207)
chr4 (227-322)||(14944758-14944853)
chr4 (207-342)||(39234934-39235068)
chr4 (262-332)||(37761907-37761977)
chr4 (227-322)||(6553816-6553911)
chr4 (393-598)||(43233643-43233848)
chr4 (227-318)||(313603-313694)
chr4 (213-326)||(34557191-34557304)
chr4 (270-326)||(45091282-45091338)
chr4 (195-341)||(25225092-25225236)
chr4 (240-311)||(23104371-23104442)
chr4 (378-427)||(12302631-12302680)
[»] chr8 (67 HSPs)
chr8 (197-341)||(17824616-17824760)
chr8 (196-342)||(17103864-17104010)
chr8 (195-342)||(3823125-3823272)
chr8 (197-342)||(24576024-24576169)
chr8 (197-336)||(8555304-8555443)
chr8 (207-342)||(33652559-33652694)
chr8 (196-342)||(19240859-19241005)
chr8 (196-342)||(19314043-19314189)
chr8 (197-342)||(4330970-4331115)
chr8 (197-342)||(17810290-17810435)
chr8 (197-342)||(27910764-27910909)
chr8 (197-342)||(27957183-27957328)
chr8 (207-342)||(18010070-18010205)
chr8 (203-342)||(37992091-37992230)
chr8 (196-342)||(27869230-27869376)
chr8 (197-342)||(29350915-29351061)
chr8 (197-342)||(6816383-6816528)
chr8 (196-341)||(18844543-18844688)
chr8 (197-342)||(22939305-22939450)
chr8 (197-342)||(24193196-24193341)
chr8 (197-301)||(8789873-8789977)
chr8 (195-322)||(19488059-19488186)
chr8 (197-336)||(43431559-43431698)
chr8 (196-322)||(10917839-10917965)
chr8 (196-326)||(19256220-19256350)
chr8 (196-342)||(21350470-21350616)
chr8 (197-326)||(11938753-11938881)
chr8 (207-342)||(32961651-32961786)
chr8 (196-322)||(13060930-13061056)
chr8 (196-342)||(4647754-4647900)
chr8 (196-326)||(30687944-30688074)
chr8 (197-322)||(32247921-32248046)
chr8 (207-342)||(9915051-9915185)
chr8 (196-322)||(23752285-23752411)
chr8 (197-319)||(25655858-25655980)
chr8 (196-326)||(30466953-30467083)
chr8 (196-342)||(40289420-40289565)
chr8 (197-342)||(6817046-6817191)
chr8 (222-326)||(5670194-5670298)
chr8 (197-341)||(16061939-16062083)
chr8 (210-326)||(24636660-24636776)
chr8 (218-322)||(26399028-26399132)
chr8 (197-333)||(29345072-29345208)
chr8 (197-326)||(25000431-25000560)
chr8 (239-342)||(5879196-5879299)
chr8 (197-322)||(8824837-8824962)
chr8 (197-322)||(25273328-25273452)
chr8 (197-322)||(31399508-31399633)
chr8 (193-342)||(9631395-9631545)
chr8 (207-342)||(15251595-15251728)
chr8 (233-322)||(19493691-19493781)
chr8 (197-336)||(31344172-31344311)
chr8 (196-322)||(33412976-33413095)
chr8 (196-304)||(6084245-6084351)
chr8 (197-342)||(21219240-21219383)
chr8 (197-277)||(25274654-25274734)
chr8 (190-342)||(3692163-3692316)
chr8 (195-283)||(42700655-42700743)
chr8 (227-322)||(41527730-41527825)
chr8 (196-326)||(17003270-17003400)
chr8 (203-293)||(2265385-2265474)
chr8 (207-322)||(14304241-14304356)
chr8 (245-318)||(15289660-15289731)
chr8 (245-318)||(15470029-15470100)
chr8 (196-292)||(35678058-35678154)
chr8 (457-509)||(44129559-44129611)
chr8 (279-341)||(25651071-25651133)
[»] scaffold0069 (1 HSPs)
scaffold0069 (203-341)||(10153-10291)
[»] scaffold0219 (1 HSPs)
scaffold0219 (196-342)||(19597-19743)
[»] scaffold0576 (1 HSPs)
scaffold0576 (195-342)||(9227-9374)
[»] scaffold0502 (1 HSPs)
scaffold0502 (197-342)||(10886-11031)
[»] scaffold0717 (1 HSPs)
scaffold0717 (196-342)||(917-1064)
[»] scaffold0001 (3 HSPs)
scaffold0001 (207-342)||(8120-8255)
scaffold0001 (207-342)||(21852-21987)
scaffold0001 (197-342)||(84297-84442)
[»] scaffold0603 (1 HSPs)
scaffold0603 (197-342)||(5979-6124)
[»] scaffold0599 (1 HSPs)
scaffold0599 (198-342)||(7499-7643)
[»] scaffold0007 (4 HSPs)
scaffold0007 (196-332)||(3746-3882)
scaffold0007 (197-341)||(202769-202913)
scaffold0007 (270-342)||(276207-276279)
scaffold0007 (197-265)||(274665-274733)
[»] scaffold0076 (1 HSPs)
scaffold0076 (196-336)||(26483-26623)
[»] scaffold0087 (1 HSPs)
scaffold0087 (197-342)||(37787-37932)
[»] scaffold0006 (3 HSPs)
scaffold0006 (207-322)||(84684-84799)
scaffold0006 (207-334)||(120997-121124)
scaffold0006 (372-616)||(231894-232138)
[»] scaffold0240 (1 HSPs)
scaffold0240 (196-326)||(14989-15119)
[»] scaffold0014 (1 HSPs)
scaffold0014 (197-326)||(22221-22350)
[»] scaffold0128 (1 HSPs)
scaffold0128 (207-326)||(10673-10792)
[»] scaffold0108 (1 HSPs)
scaffold0108 (207-342)||(12647-12781)
[»] scaffold0655 (1 HSPs)
scaffold0655 (194-342)||(3159-3305)
[»] scaffold0009 (3 HSPs)
scaffold0009 (197-342)||(219630-219775)
scaffold0009 (198-322)||(182544-182668)
scaffold0009 (207-322)||(215673-215781)
[»] scaffold0023 (1 HSPs)
scaffold0023 (196-342)||(39702-39848)
[»] scaffold0161 (1 HSPs)
scaffold0161 (207-342)||(6789-6924)
[»] scaffold0062 (1 HSPs)
scaffold0062 (196-336)||(43917-44057)
[»] scaffold0019 (2 HSPs)
scaffold0019 (197-341)||(173439-173584)
scaffold0019 (369-436)||(138939-139006)
[»] scaffold0184 (1 HSPs)
scaffold0184 (207-341)||(7451-7585)
[»] scaffold0035 (1 HSPs)
scaffold0035 (211-342)||(74731-74863)
[»] scaffold0039 (1 HSPs)
scaffold0039 (366-616)||(41761-42011)
[»] scaffold0002 (1 HSPs)
scaffold0002 (195-322)||(439977-440104)
[»] scaffold0011 (1 HSPs)
scaffold0011 (197-285)||(17617-17705)
[»] scaffold0284 (1 HSPs)
scaffold0284 (227-322)||(1549-1644)
[»] scaffold0114 (1 HSPs)
scaffold0114 (227-322)||(36316-36411)
[»] scaffold0211 (1 HSPs)
scaffold0211 (234-322)||(19175-19263)
[»] scaffold0024 (1 HSPs)
scaffold0024 (265-341)||(112323-112399)
[»] scaffold0038 (2 HSPs)
scaffold0038 (198-281)||(22145-22228)
scaffold0038 (198-285)||(34197-34284)
[»] scaffold0554 (1 HSPs)
scaffold0554 (196-265)||(9881-9950)


Alignment Details
Target: chr5 (Bit Score: 542; Significance: 0; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 542; E-Value: 0
Query Start/End: Original strand, 225 - 846
Target Start/End: Original strand, 33816786 - 33817410
Alignment:
Q  225 ggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaat 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33816786 ggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaaggaatttcatgttttccctcactaaat 33816885  T
Q  325 ttccctcactaacttttgnnnnnnnagtagtgataatgagtcagtttagaccaattgcaatggccaattttaaattcaaaaccatctccaagatcatagc 424  Q
    ||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  33816886 ttccctcactaacttttgtttttttagtagtgacaatgagtcagtttagaccaattgcaatggccaatattaaattcaaaatcatctccaagatcatagc 33816985  T
Q  425 agacat---gttagctcaattaatgcctactttaatttctaaagagcaaagaggtttcattcatggtaggaatataaaggattgcattcttatagcttca 521  Q
    |||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33816986 agacaacaggttagctcaattaatgcctactttaatttctaaagagcaaagaggtttcattcatggtaggaatataaaggattgcattcttatagcttca 33817085  T
Q  522 gaagctattaatttgcttgatgcaaagtcatttggtggcaacatagctttggaagtggatatagccaaagcctttgatacattagaatggagtttgttga 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33817086 gaagctattaatttgcttgatgcaaagtcatttggtggcaacatagctttggaagtggatatagccaaagcctttgatacattagaatggagttttttga 33817185  T
Q  622 ttgaagttttaacaaagtttggttttaatgcaacttcccgtaattggataaaggccatactggattcagctcacttatctatctctatcaatggtaccca 721  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33817186 ttgaagttttaacaaagtttggttttagtacaacttcccgtaattggataatggccacactggattcagctcacttatctatctctatcaatggtaccca 33817285  T
Q  722 acatggttacttttaagtgtactttaagtgtactcgcttttctatcttgcagaagaagtgttgagcaggggcatttctaaaccggtggataatggtgatt 821  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  33817286 acatggttacttttaagtgtactttaagtgtactcgcttttctatcttgcagaagaagtgttgagcacgggcatttctaaactggtggataatggtgatt 33817385  T
Q  822 tagagttgatgtcaagcactagaag 846  Q
    |||||||||||||||||||||||||    
T  33817386 tagagttgatgtcaagcactagaag 33817410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 33807426 - 33807638
Alignment:
Q  19 aataaggatagt-cccctggccagatgggtttggagctgccttctttcaaactttgtgggatatcataaagataaatgtggagaaagcagtgttgcagtt 117  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33807426 aataaggatagttcccctagccagatgggtttggagctgtcttctttcaaactttgtgggatatcataaagacaaatgtggagaaagcagtgttgcagtt 33807525  T
Q  118 ttttacttctggatagatcatgccaaacttcaactcaaaaactattgctttaattccaaagacacctaatgcagacacacactattaggaaaagcaaaat 217  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  33807526 ttttacttctggatggatcatgccaaacttcaactcaaaaactattgctttaattccaaagacacctaatgcagacacacactactaggtaaagcaaaat 33807625  T
Q  218 tagggagggaaat 230  Q
    ||||| |||||||    
T  33807626 tagggtgggaaat 33807638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 33818560 - 33818706
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33818560 acactactagaaaaagcaaaattggggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 33818659  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||||||||||||| |||||    
T  33818660 gagggatttcatgttttccctcactaaatttccctcactaatttttg 33818706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 194 - 341
Target Start/End: Original strand, 23423753 - 23423900
Alignment:
Q  194 acacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 293  Q
    |||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23423753 acacactactaggataagcaaaattagggagggaaatttgtgacgaaaaacataaaattcctcacaaattccttggttgcaaaatttagtgacggaatta 23423852  T
Q  294 gaaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    || ||||||||||||||||||||||||||||||| |||||||| ||||    
T  23423853 gagagggatttcatgttttccctcactaaatttcactcactaattttt 23423900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 618434 - 618288
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  618434 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 618335  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||| ||||||||||| |||||    
T  618334 gagggatttcatgttttccctcactaaatatccctcactaatttttg 618288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 16121838 - 16121984
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16121838 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcacaaaatttagtgacggaattaga 16121937  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||| ||||||||||| |||||    
T  16121938 gagggatttcatgttttccctcactaaatatccctcactaatttttg 16121984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 25397787 - 25397913
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  25397787 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcgtcacaaattctttggtcgcaaaatttagtgacggaattaga 25397886  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||||||||||||||||||||||||||    
T  25397887 gagggatttcatgttttccctcactaa 25397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 195 - 342
Target Start/End: Original strand, 35620342 - 35620488
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35620342 cacactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaa-ttcctcacaaattccttggtcgcaaaatttagtgacggaattag 35620440  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | | |||||||||||||||||||||||||| ||||||| ||| |||||    
T  35620441 agaaggatttcatgttttccctcactaaatatccctcattaatttttg 35620488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 196 - 336
Target Start/End: Original strand, 17039630 - 17039770
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||| ||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17039630 acactactagaaaaagcaaaattagtgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 17039729  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     |||||||||| |||||||||||||| ||||||||||||||    
T  17039730 gagggatttcacgttttccctcactatatttccctcactaa 17039770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 2472714 - 2472859
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| || ||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||| |||||||||||||     
T  2472714 cactactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagag 2472813  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||    
T  2472814 agggatttcatgttttccctcactaaatatccctcattaatttttg 2472859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 8886851 - 8886996
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||| |||||||||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  8886851 cactactagaaaaagcaaaattagcgaggaaaatttgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 8886950  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| |  |||||||||||||||||||||||||||| |||||    
T  8886951 agggattttacattttccctcactaaatttccctcactaatttttg 8886996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 12328225 - 12328371
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| || || ||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  12328225 acactactagaaaaagcaaaattagtgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattaga 12328324  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||| |||||||||||||||||||||||| ||||||||||| |||||    
T  12328325 gaggaatttcatgttttccctcactaaatatccctcactaatttttg 12328371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 23975764 - 23975630
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  23975764 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 23975665  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||||| |||||||||||||||| ||||    
T  23975664 cgttttccctcacaaaatttccctcactaattttt 23975630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 8108860 - 8109005
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||     
T  8108860 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagag 8108959  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| ||||||||||||||||||| ||||||| |||||||| |||||    
T  8108960 aggaatttcatgttttccctcacaaaatttctctcactaatttttg 8109005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 12045866 - 12045721
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||     
T  12045866 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgtaaaatttagtgacggaattagag 12045767  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||| | ||||||||||||||||||||||||||||| |||||    
T  12045766 aaggattttacgttttccctcactaaatttccctcactaatttttg 12045721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 25652583 - 25652728
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| |||||||||||||| |||||||||  ||||||||||| || |||||||||||||||||||| |||||||||||| ||||||||||||||     
T  25652583 cactattagaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcacaaattccttagtcgcaaaattttgtgacggaattagag 25652682  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| |  ||||||||||||||||||||||||| || |||||    
T  25652683 agggattttacattttccctcactaaatttccctcaccaaattttg 25652728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 36196533 - 36196388
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||| ||| |||||||||||||||||||||||||||||     
T  36196533 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaaatccatggtcgcaaaatttagtgacggaattagag 36196434  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||  ||||||||||| |||||||||||||||| |||||    
T  36196433 agggatttcacattttccctcacaaaatttccctcactaatttttg 36196388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 746878 - 746993
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  746878 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 746977  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  746978 cgttttccctcactaa 746993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 15061102 - 15060967
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  15061102 aaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 15061003  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||| |||||| |||||||||||||||| |||||    
T  15061002 cgtttttcctcacaaaatttccctcactaatttttg 15060967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 7888936 - 7888791
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| ||||||||||  |||| ||||| || ||||||||||||||||||||||||| |||||||||||||||| |||||     
T  7888936 cactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggagttagag 7888837  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| | ||||||||||||||||||| ||||||||| |||||    
T  7888836 agggattttacgttttccctcactaaattttcctcactaatttttg 7888791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 25673228 - 25673373
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||  ||||||||||||| ||||| ||||| ||||| |||||| |||| |||||||| |||||||||||||| |||||||||||||||    
T  25673228 acactactaggaaaataaaaattagggaggaaaattagtgacggaaaaaataaaactcct-acaaattctttggtcgcaaaattcagtgacggaattaga 25673326  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||  ||||||||||||||||||||| |||||    
T  25673327 gagggatttcatgttttctgtcactaaatttccctcactaaattttg 25673373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 13620126 - 13620271
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| ||||| ||||||||||||| ||||| ||||| |||||||  ||||||||||  ||||||||||||||| ||||| ||||||||    
T  13620126 acactactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttgttggtcgcaaaattttgtgacagaattaga 13620225  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||    
T  13620226 gagggatttcatgttttccctcactaaatttccgtcactaattttt 13620271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 341
Target Start/End: Complemental strand, 20959648 - 20959503
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| ||||||||||||| ||||   |||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  20959648 acactactagaaaaagtaaaattagggaggaaaatcactgacggaaaaaataaaattcctcacaaattccttagtcgtaaaatttagtgacggaattaga 20959549  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     || ||||||| |||||||||| |||||||||||||||||| ||||    
T  20959548 gagagatttcacgttttccctctctaaatttccctcactaattttt 20959503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 38837671 - 38837796
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||     
T  38837671 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagag 38837770  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| | |||||||||||||||    
T  38837771 agggattttacgttttccctcactaa 38837796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 17986858 - 17986723
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| ||| |||||| ||||| ||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||| | | ||||||    
T  17986858 aaaagtaaaattagtgagagaaattagtgacggaaaaaatgaaattcttcacaaattccttcgtcgcaaaatttagtgacggaattagagaagaatttca 17986759  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||| ||||||||||| |||||    
T  17986758 tgttttccctcactaaatatccctcactaatttttg 17986723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 10494877 - 10494751
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||  ||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10494877 acactactagaaaaagcaaatgtagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 10494778  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     |||||||| | |||||||||||||||    
T  10494777 gagggattttacgttttccctcactaa 10494751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 24138840 - 24138970
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| |||||||||||||| |||| ||||| ||||| ||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  24138840 acactattagaaaaagcaaaattagcgaggaaaattggtgacggaaaaaatgaaatttctcacaaattgcttggtcgcaaaatttagtgacggaattaga 24138939  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     || ||||| | |||||||||||||||||||    
T  24138940 gagagattttacgttttccctcactaaattt 24138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 207 - 341
Target Start/End: Original strand, 27428022 - 27428156
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| ||||||||||||||||||| |||||  |||| |||||||| || | |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  27428022 aaaagaaaaattagggagggaaattagtgacgaaaaaaataaaattgctaataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 27428121  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||| |||||||| ||||||||| ||||    
T  27428122 cgttttccctctctaaattttcctcactaattttt 27428156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 195 - 341
Target Start/End: Original strand, 28265473 - 28265619
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| ||||| |||||||| |||| ||||| ||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||    
T  28265473 cacactactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattag 28265572  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    | |||||||| | || ||||||||| |||||||||||| ||| ||||    
T  28265573 agagggattttacgtcttccctcacaaaatttccctcattaattttt 28265619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 196 - 336
Target Start/End: Original strand, 7003729 - 7003867
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| ||||||||| |||||||||| ||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||     
T  7003729 acactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaattccatgatcgcaaaatttagtgacggaattag- 7003827  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     || ||||||| |||||||||||| ||||||||||||||||    
T  7003828 -agagatttcacgttttccctcacaaaatttccctcactaa 7003867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 11927786 - 11927931
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| ||||||||||||||||||  ||||| | ||  ||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||||     
T  11927786 cactattagaaaaagcaaaattagggagataaattagagatggaaaaaataaaatccctcacaaattacttcgtcgcaaaatttagtgacggaattagag 11927885  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| ||||||| || ||||| |||||||||||| |||||    
T  11927886 agggatttcacgttttccgtctctaaaattccctcactaatttttg 11927931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 26708585 - 26708714
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||| |||||||||| |||||||||| ||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  26708585 cactactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 26708684  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    ||| |||| | |||||||||||||||||||    
T  26708685 aggaattttacgttttccctcactaaattt 26708714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 26978319 - 26978448
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||| |||||||||| |||||||||| ||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  26978319 cactactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 26978418  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    ||| |||| | |||||||||||||||||||    
T  26978419 aggaattttacgttttccctcactaaattt 26978448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 36597340 - 36597465
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||| |||||  |||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||     
T  36597340 cactactagaaaaagcaaaatttgggagaaaaatttatgacggaaaacataaaattcctcacaaattccttggtcgtaaaatttagtgacagaattagag 36597439  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    ||| |||| |||||||||||||||||    
T  36597440 aggaattttatgttttccctcactaa 36597465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 36831890 - 36832035
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| | |||  |||| || |||||||||| ||||||||||||| ||||||||||||| |||||||||     
T  36831890 cactactagaaaaagcaaaattagtgagggaaattagggacgaaaaaaatgaaattcctcataaattccttggtcacaaaatttagtgatggaattagag 36831989  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| |  |||||||||||||||||||||||||||| |||||    
T  36831990 agggattttacattttccctcactaaatttccctcactaatttttg 36832035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 23409120 - 23408980
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||| ||| |||||||||||||| |||  ||||| ||||| ||||| | | |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  23409120 cactactagaaaaagcaaaattagcgagaaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattaga 23409021  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     |||||||| | |||||||||||||||||||||||||||||    
T  23409020 gagggattttacgttttccctcactaaatttccctcactaa 23408980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 5982785 - 5982639
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||| ||| ||||||||||| || |||||||||| ||||| ||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  5982785 cactactagaaaaagcaaaatcagcgagggaaattagtgacggaaaaaaatggaattcctcacaaattccttggtcgcaaagtttagtgacggaattaga 5982686  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||| | ||||||||||||||||||| ||||| ||| |||||    
T  5982685 gagggattttaggttttccctcactaaattttcctcattaatttttg 5982639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 17036411 - 17036557
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||| |||||||||||||| || ||| ||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17036411 acactactagaaaatgcaaaattagggagcgagattagtgacggaagaaataaaattcctcacaaattccttggtcgcaaaatttagtgacagaattaga 17036510  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||   |||||||||| ||||||| ||||||| || |||||    
T  17036511 gagggattttgcgttttccctctctaaattaccctcacaaatttttg 17036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 16631874 - 16631999
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||     
T  16631874 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagag 16631973  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| | ||||||| |||||||    
T  16631974 agggattttacgttttccttcactaa 16631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 20187941 - 20188085
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| |||||||||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||||     
T  20187941 cactattagcaaaagcaaaattagcgaaggaaattagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacagaattagag 20188040  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    || ||||  | |||||| ||||||||||||  |||||||| ||||    
T  20188041 agtgattctacgttttctctcactaaatttttctcactaattttt 20188085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 201 - 342
Target Start/End: Original strand, 3080700 - 3080841
Alignment:
Q  201 attaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaaggg 300  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||| |||||||  ||||||||||| || ||| ||||| ||||||| | |||| || ||||    
T  3080700 attaggaaaagcaaaattaggtagggaaattcgtgatggaaaaaataaaatctctcacaaattctttagtcacaaaacttagtgatgaaatttgagaggg 3080799  T
Q  301 atttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||| | ||||||| |||||    
T  3080800 atttcatgttttccctcactaaattttcttcactaatttttg 3080841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 4125188 - 4125313
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||     
T  4125188 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagag 4125287  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    || |||||||  ||||||||||||||    
T  4125288 agagatttcacattttccctcactaa 4125313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 212 - 341
Target Start/End: Original strand, 10420267 - 10420396
Alignment:
Q  212 caaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttt 311  Q
    ||||||||| |||||||||| ||||| ||||| ||||||| |||||||| ||  |||||||||||||||||||||  ||||||| |||||||||||||||    
T  10420267 caaaattagagagggaaattagtgacggaaaaaataaaatccctcacaattttgttggtcgcaaaatttagtgacaaaattagagagggatttcatgttt 10420366  T
Q  312 tccctcactaaatttccctcactaactttt 341  Q
    |||||| ||||| || ||||||||| ||||    
T  10420367 tccctctctaaaatttcctcactaattttt 10420396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 13974078 - 13974223
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| | |||  |||| || |||||| ||||||||| | ||||||  ||||||||||||||||| |||     
T  13974078 cactactagaaaaagcaaaattagcgagggaaattagcgacgaaaaaaatgaaattcttcacaaatttcatggtcgtgaaatttagtgacggaatcagag 13974177  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  13974178 agggatttcacgttttccctcacaaaatttccctcactaatttttg 13974223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 17771969 - 17772093
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| ||||| ||||| || |||||||||| ||||| ||||| || |||||||||| |||||||||| |||||||||||||||||||||||||| |    
T  17771969 actactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaaaaattccttgatcgcaaaatttagtgacggaattagaga 17772068  T
Q  298 gggatttcatgttttccctcactaa 322  Q
    | ||||| |||||||||||||||||    
T  17772069 gagattttatgttttccctcactaa 17772093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 198 - 342
Target Start/End: Original strand, 33734974 - 33735117
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||||||||||||||||||||||| |||||  |||  ||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| | |    
T  33734974 actactaggaaaagcaaaattagggaggaaaattaatgagggaaaaaataaaatccctcataaattccttggtcgcaaaatttagtgacggaattaaaga 33735073  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| |||||||||||  |||  |||||||||| |||||| |||||    
T  33735074 ggggtttcatgtttt-tctctataaatttcccccactaatttttg 33735117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 17079502 - 17079399
Alignment:
Q  239 gaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaact 338  Q
    ||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||| |    
T  17079502 gaaaaaataaaatcccttacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttgatgttttccctttctaaatttccctcactaatt 17079403  T
Q  339 tttg 342  Q
    ||||    
T  17079402 tttg 17079399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 32726735 - 32726865
Alignment:
Q  206 gaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttc 305  Q
    ||||||||||||||||||| |||||| ||||  ||||| ||||||  | | ||||||||||||||||||||||||||||||||||||||| ||  |||||    
T  32726735 gaaaagcaaaattagggagcgaaattagtgatggaaaatataaaacccttgacaaattccttggtcgcaaaatttagtgacggaattagagagaaatttc 32726834  T
Q  306 atgttttccctcactaaatttccctcactaa 336  Q
    |  ||||||||| |||||||||| |||||||    
T  32726835 acattttccctctctaaatttccttcactaa 32726865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 40484184 - 40484058
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| |||||||||| ||||| ||||  || ||||| || | |||||||||||||||||||||||||||||||||||||    
T  40484184 acactactagaaaaagaaaaattagcgagggaaattagtgacggaaataatgaaatttcttataaattccttggtcgcaaaatttagtgacggaattaga 40484085  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     |||||||| | |||||||||||||||    
T  40484084 gagggattttacgttttccctcactaa 40484058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 36716200 - 36716345
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||  ||||| || |||||||||||||||||  |||||| |||||||| ||| |||||||||     
T  36716200 cactactagaaaaaacaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctatggtcgtaaaatttaatgaaggaattagag 36716299  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||||| |||||||||||| |||||| ||||||||| |||||    
T  36716300 aaggatttcacgttttccctcacaaaattttcctcactaatttttg 36716345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 23974575 - 23974703
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||| ||||||||| ||| ||||| ||||| ||||| |||||||  |||||||||||||| |||| |||||||| ||||| |||||||    
T  23974575 acactactaggaaaagaaaaattaggaaggaaaattagtgacggaaaaaataaaatctctcacaaattcctttgtcgtaaaatttaatgacgaaattaga 23974674  T
Q  296 aagggatttcatgttttccctcactaaat 324  Q
     |||||||  ||| |||||||||||||||    
T  23974675 gagggattgaatgctttccctcactaaat 23974703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 35778270 - 35778155
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||| |||||||||||| ||||  ||||| |||||||  ||||||||||| |||||||||||||||| | || |||| ||| ||||||||||    
T  35778270 aaaagtaaaatttgggagggaaattagtgatggaaaaaataaaatctctcacaaattcattggtcgcaaaatttaatcacagaatgagatagggatttca 35778171  T
Q  307 tgttttccctcactaa 322  Q
    ||||||||||||||||    
T  35778170 tgttttccctcactaa 35778155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 227 - 342
Target Start/End: Complemental strand, 18413665 - 18413550
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| |||||  |||| |||||||  ||||||| || ||| |||| ||||||||  |||||||||| ||||||| |||| |||||||||| ||||||||    
T  18413665 aaattagtgacttaaaaaataaaatcactcacaagtttcttagtcgtaaaatttaacgacggaattaaaaagggaattcacgttttccctctctaaattt 18413566  T
Q  327 ccctcactaacttttg 342  Q
    |||||||||| |||||    
T  18413565 ccctcactaatttttg 18413550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 219 - 317
Target Start/End: Original strand, 31853109 - 31853208
Alignment:
Q  219 agggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctc 317  Q
    |||||| |||||| |||| |||||| | |||||| ||||| |||||   ||||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  31853109 agggagagaaattagtgatagaaaaaaataaaatccctcataaattttatggtcgcaaaatttagtgacggaattagagagagatttcatgtttttcctc 31853208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 9024323 - 9024227
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaa-ttagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||| ||||| ||||||| ||||  ||||||||||||||||||||||||| ||  || ||||| || ||||||||||| |||||||||||    
T  9024323 aaattagtgacggaaaaaataaaatccctcgtaaattccttggtcgcaaaatttagtaacataatttagagagagatttcatgttatccctcactaa 9024227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 198 - 341
Target Start/End: Original strand, 16472182 - 16472325
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaa-tttagtgacggaattagaa 296  Q
    |||| ||| |||||||||||| |||||| ||||| ||| |  |||| ||||||| | ||| |||||| |||||||||||| ||||||||| ||||||||     
T  16472182 actactagaaaaagcaaaatttgggagg-aaattagtgtcgaaaaaaataaaatccttcaaaaattcgttggtcgcaaaagtttagtgacagaattagag 16472280  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    || |||| ||  |||| |||| |||||||||| ||||||| ||||    
T  16472281 agcgattccacttttttcctctctaaatttccgtcactaattttt 16472325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 274 - 341
Target Start/End: Original strand, 22649406 - 22649473
Alignment:
Q  274 aaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||| ||||||||||||| | |||||||| |||||||||| ||||||||| |||| ||| ||||    
T  22649406 aaaatttaatgacggaattagagaaggatttcacgttttccctctctaaatttctctcattaattttt 22649473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 29727928 - 29727991
Alignment:
Q  279 ttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||| ||| |||||| |||||||||| | |||||| ||||||||| |||||    
T  29727928 ttagtgacggaattagagaggaatttcacgttttccctcgcaaaatttgcctcactaatttttg 29727991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 330
Target Start/End: Original strand, 5043541 - 5043644
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| ||||||||||| || ||||| ||||||||||   | |||  ||||||||||| ||||||||||  || |||||  ||||| |||| ||||||||    
T  5043541 aaattagtgacagaaaaaatgaaatttctcacaaattttatcgtcataaaatttagtggcggaattagaggggaatttcgcgtttttcctctctaaattt 5043640  T
Q  327 ccct 330  Q
    ||||    
T  5043641 ccct 5043644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 322
Target Start/End: Complemental strand, 16464735 - 16464692
Alignment:
Q  279 ttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||    
T  16464735 ttagtgacggaaatagagaggaatttcatgttttccctcactaa 16464692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 16464768 - 16464723
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaa 242  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| ||||    
T  16464768 cactactaggaaaggcaaaattagggagggaaattagtgacggaaa 16464723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 18264664 - 18264730
Alignment:
Q  254 ctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    |||||||| |||||| || |||||||||||||| |||||||  ||  ||||||| ||||||||||||||    
T  18264664 ctcacaaactccttgatcacaaaatttagtgacagaattag--agaaatttcatattttccctcactaa 18264730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 7e-67; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 39979623 - 39979768
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39979623 acactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttaatgacggaattaga 39979722  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||||||||||||||||||||||||||||||||| ||||    
T  39979723 gagggatttcatgttttccctcactaaatttccctcactaattttt 39979768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 40847434 - 40847580
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  40847434 acactactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattcgtcacaaattctttggtcgcaaaatttagtgacggaattaga 40847533  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||||||||||||| |||||    
T  40847534 gagggatttcatgttttccctcactaaatttccctcactaatttttg 40847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 36636628 - 36636500
Alignment:
Q  214 aaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttc 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36636628 aaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttc 36636529  T
Q  314 cctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||| ||||||||| |||||    
T  36636528 cctcactaaatttgcctcactaatttttg 36636500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 23232178 - 23232033
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23232178 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagaa 23232079  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  23232078 agggatttcatgttttccctcactaaatatccctcactaatttttg 23232033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 28801017 - 28800872
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||     
T  28801017 cactactagaaaaagcaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagag 28800918  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  28800917 agggatttcatgttttccctcactaaatatccctcactaatttttg 28800872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 1824199 - 1824325
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1824199 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 1824298  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||| ||||||| ||||||||||||||    
T  1824299 gaggaatttcatattttccctcactaa 1824325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 15014404 - 15014550
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| |||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15014404 acactactagaaaaagtaaaattagcgagggaaattggtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgacggaattaga 15014503  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||| ||||||||||| |||||    
T  15014504 gagggatttcatgttttccctcactaaatatccctcactaatttttg 15014550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 22486533 - 22486388
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  22486533 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 22486434  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||    
T  22486433 agggatttcacgttttccgtcactaaatttccctcactaatttttg 22486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 36993959 - 36993814
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  36993959 cactactaggaaaagcaaaattagggagggaaatttgtgatggaaaatataaaattcctcacaaatttcttagtcgtaaaatttagtgacggaattagaa 36993860  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||||||||||| ||||||||||||||| ||||||| |||||    
T  36993859 agagatttcatgtttttcctcactaaatttccttcactaatttttg 36993814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 4514905 - 4514779
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  4514905 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcacaaattctttggtcgcaaaatttagtgaaggaattaga 4514806  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||||||||||| ||||||||||||||    
T  4514805 gagggatttcatattttccctcactaa 4514779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 26577405 - 26577279
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| | ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26577405 acactactgggaaaagcaaaattaggaagggaaacttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggtattaga 26577306  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||||||||||||||||||||||||||    
T  26577305 gagggatttcatgttttccctcactaa 26577279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 27806157 - 27806012
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||| ||||| ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||     
T  27806157 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagag 27806058  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  27806057 agggatttcatgttttccctcactaaatatccctcactaatttttg 27806012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 31425511 - 31425656
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||  |||||||||||||||||||||||||||||     
T  31425511 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctgtggtcgcaaaatttagtgacggaattagag 31425610  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||    
T  31425611 agggattttacgttttccctcactaaatttccctcactaatttttg 31425656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 21917334 - 21917473
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  21917334 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 21917433  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| | ||||||||||||||||| |||||||||||    
T  21917434 agggattttacgttttccctcactaaatgtccctcactaa 21917473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 204 - 342
Target Start/End: Complemental strand, 20174152 - 20174014
Alignment:
Q  204 aggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatt 303  Q
    ||||||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||    
T  20174152 aggaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatt 20174053  T
Q  304 tcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| |||||||||||| |||||||||||||||| |||||    
T  20174052 tcacgttttccctcacaaaatttccctcactaatttttg 20174014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 1907494 - 1907349
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| |||||||||||||||||| |||||||||| ||||| ||||| ||||||| ||||||| |||| |||||||||||||||||||||| |||||||     
T  1907494 cactactaggaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaatccctcacatattctttggtcgcaaaatttagtgacgaaattagag 1907395  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||    
T  1907394 agggatttcatgttttccctcactagattttcctcactaatttttg 1907349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 7733312 - 7733457
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||| ||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||     
T  7733312 cactactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagagacggaattagag 7733411  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||    
T  7733412 agggatttcatgttttacctcactaaatatccctcactaatttttg 7733457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 213 - 342
Target Start/End: Original strand, 47523666 - 47523795
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    |||||||| |||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  47523666 aaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttcatgtttt 47523765  T
Q  313 ccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||| ||||||||||| |||||    
T  47523766 ccctcactaaatatccctcactaatttttg 47523795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 203 - 342
Target Start/End: Complemental strand, 2457801 - 2457664
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||| || |||||||||||||||||||||||| || ||||||    
T  2457801 taggaaaagcaaaattagggagggaaattagtgacagaaaatataaaat--ctcacaaattcttttgtcgcaaaatttagtgacggaatttgagagggat 2457704  T
Q  303 ttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||| |||||| ||||||||| |||||    
T  2457703 ttcatgttttccctcacaaaattttcctcactaatttttg 2457664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 23577189 - 23577333
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||| || ||| |||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  23577189 cactactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagat 23577288  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    
T  23577289 agggatttcacgttttccctcactaaatttccctcactaattttt 23577333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 198 - 342
Target Start/End: Complemental strand, 24140588 - 24140444
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||| |||||||| |||||||||| || |    
T  24140588 actactaggaaaagtaaaattagggaggaaaatttgtgacggaaaatataaaattcctcacaaattctttggtcgtaaaatttaatgacggaattggaga 24140489  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||| ||||||||||||||||||||||||||||||| |||||    
T  24140488 aggattttatgttttccctcactaaatttccctcactaatttttg 24140444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 18217968 - 18217829
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||| |||||||     
T  18217968 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaattagag 18217869  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| | ||||| |||||||||||||||||||||||    
T  18217868 agggattttacgtttttcctcactaaatttccctcactaa 18217829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 194 - 332
Target Start/End: Complemental strand, 1843036 - 1842898
Alignment:
Q  194 acacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 293  Q
    |||||||| ||| |||||||||||||  |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  1843036 acacactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 1842937  T
Q  294 gaaagggatttcatgttttccctcactaaatttccctca 332  Q
    |  |||||||| | |||||||||||||||||||||||||    
T  1842936 gggagggattttacgttttccctcactaaatttccctca 1842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 48933276 - 48933130
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| |||||||||||||| |||| ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48933276 acactattagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaattaga 48933177  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||| |||||| |||||  ||||| |||||||||||||||| |||||    
T  48933176 gaggaatttcacgttttttctcacaaaatttccctcactaatttttg 48933130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 196 - 336
Target Start/End: Complemental strand, 11036647 - 11036507
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||||||  ||||||||| ||||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||    
T  11036647 acactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattaga 11036548  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     |||||||||| |||||||||||| ||||||||||||||||    
T  11036547 gagggatttcacgttttccctcacaaaatttccctcactaa 11036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 37135284 - 37135430
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || |||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  37135284 acactactagaaaaaacaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcataaattccatggtcgtaaaatttagtgacggaattaga 37135383  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| |||||||||||| |||||||||||||||| |||||    
T  37135384 gagggatttcacgttttccctcacaaaatttccctcactaatttttg 37135430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 24605977 - 24605832
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||| || |||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||     
T  24605977 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagag 24605878  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||||| ||||||||||||||||||| ||||||||| |||||    
T  24605877 agagatttcacgttttccctcactaaattttcctcactaatttttg 24605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 190 - 342
Target Start/End: Complemental strand, 20429611 - 20429459
Alignment:
Q  190 agacacacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacgga 289  Q
    ||||| |||||| ||| |||||||||||||   ||||||||| ||||| ||||| || |||||||||||||||| | |||||| ||||||||||||||||    
T  20429611 agacatacactactagaaaaagcaaaattaacaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgtaaaatttagtgacgga 20429512  T
Q  290 attagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||| |||||    
T  20429511 attagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 20429459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 23750736 - 23750875
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||     
T  23750736 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgtaaaatttagtgacggaattagag 23750835  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| |  ||||||||||||||||||||||||||||    
T  23750836 agggattttacattttccctcactaaatttccctcactaa 23750875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 196 - 336
Target Start/End: Original strand, 9698537 - 9698677
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||  || |||||| |||||||||||||||||  ||||||||||||||||||||||    
T  9698537 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcacaaattccttggtcataaaatttagtgacggaattaga 9698636  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     ||| |||| | |||||||||||||||||||||||||||||    
T  9698637 gaggaattttacgttttccctcactaaatttccctcactaa 9698677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 195 - 322
Target Start/End: Original strand, 3904476 - 3904603
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  3904476 cacactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcgcaaatttcttggtcgcaaaatttagtgacggaattag 3904575  T
Q  295 aaagggatttcatgttttccctcactaa 322  Q
    | |||||||| | |||||||||||||||    
T  3904576 agagggattttacgttttccctcactaa 3904603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 6849211 - 6849350
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| || || || |||||||||||||||||||| |||||||||||||||||||||||||||     
T  6849211 cactactagaaaaagcaaaattagcgagggaaattagtgacggagaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagag 6849310  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    || ||||| | ||||| |||||||||||||||||| ||||    
T  6849311 agagattttacgttttacctcactaaatttccctcgctaa 6849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 10050866 - 10050981
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| ||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  10050866 aaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 10050965  T
Q  327 ccctcactaacttttg 342  Q
    |||||||||| |||||    
T  10050966 ccctcactaatttttg 10050981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 3872187 - 3872312
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||     
T  3872187 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtctcaaaatttagtgacggaattagag 3872286  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    || ||||| | |||||||||||||||    
T  3872287 agagattttacgttttccctcactaa 3872312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 45664877 - 45664768
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||    
T  45664877 aaattagtgacagaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagagagggattttacgttttccctcactatattt 45664778  T
Q  327 ccctcactaa 336  Q
    ||||||||||    
T  45664777 ccctcactaa 45664768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 11852137 - 11852021
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||| |||||| ||||||||||||||||||||||| | ||||||||    
T  11852137 aaaagcaaaattagggagagaaatttgtgacagaaaaaataaaatgtctcacaaattctttggtcacaaaatttagtgacggaattagagaaggatttca 11852038  T
Q  307 tgttttccctcactaaa 323  Q
     |||||||||| |||||    
T  11852037 ggttttccctctctaaa 11852021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 816201 - 816336
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||| |||| ||||||||||||||| ||||| ||||| | |||||  ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  816201 aaaaacaaatttagggagggaaattagtgacggaaaaaacaaaatctctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttca 816300  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||| || |||||||| ||||||||| |||||    
T  816301 cgttttccatctctaaattttcctcactaatttttg 816336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 38057761 - 38057626
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||||| |  |||| ||||| ||||  ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  38057761 aaaagcaaaatcaacgaggaaaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaagtttagtgacggaattaaagagggatttca 38057662  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| |||||||||||||| ||| |||||    
T  38057661 cgttttccctcgctaaatttccctcattaatttttg 38057626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 42926418 - 42926565
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    |||||| ||| ||||  |||||||| |||| ||||| ||||| ||||| | | |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  42926418 acactactagaaaaaataaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttagtcgcaaaatttagtgacggaattag 42926517  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||||||||||||| ||||||||||| ||||||||||| |||||    
T  42926518 agagggatttcatgtttttcctcactaaatatccctcactaatttttg 42926565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 330
Target Start/End: Original strand, 14786634 - 14786768
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| |||| ||||||||| |||| ||||| ||||||||||| || ||||||||||||||||  |||||||||||||||||||||||||||| |    
T  14786634 acactattagaaaaaacaaaattagtgaggaaaattagtgacagaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggaattaaa 14786733  T
Q  296 aagggatttcatgttttccctcactaaatttccct 330  Q
    |||| |||| | ||||||||||  |||||||||||    
T  14786734 aaggaattttacgttttccctcgttaaatttccct 14786768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 20923958 - 20924103
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||||| ||||||||||| ||||  ||||| |||||||  || |||||||  |||||| |||||||||||||| ||||||||     
T  20923958 cactactagaaaaagtaaaattatggagggaaattagtgatggaaaaaataaaatctcttacaaatttgttggtcacaaaatttagtgacagaattagag 20924057  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||    
T  20924058 agggatttcatgttttccctcactaaatttccatcactaatttttg 20924103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 21623159 - 21623031
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||| || |||||||||| ||||| ||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||     
T  21623159 cactactagaaaaagcaaaat-agcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgggcgcaaaatttagtgatggaattagag 21623061  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| | |||||||||||||||||||    
T  21623060 agggattttacgttttccctcactaaattt 21623031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 23699825 - 23699970
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||| | |||||||||||||||||||| |||||| |     
T  23699825 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaattaaag 23699924  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||  ||||||||||| ||||||| |||||||| |||||    
T  23699925 agggatttcacattttccctcacaaaatttctctcactaatttttg 23699970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 203 - 336
Target Start/End: Complemental strand, 27305003 - 27304872
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||||||| || |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  27305003 taggaaaaacaaaattagggagggaaattagtgacagaaaaaataaaatcccccacaaattccttggccgcaaaatttagtgacggaattagagagggat 27304904  T
Q  303 ttcatgttttccctcactaaatttccctcactaa 336  Q
     ||| | ||||| |||| |||||||||| |||||    
T  27304903 gtcacg-tttccttcac-aaatttccctgactaa 27304872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 31042374 - 31042245
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    |||||||| |||| ||||| || |  ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  31042374 aaaattagagaggaaaattagttatggaaaaaataaaatttctcacaaattccttggtcgcaaaatttagtgacagaattagagagggatttcacgtttt 31042275  T
Q  313 ccctcactaaatttccctcactaacttttg 342  Q
    ||||| ||||| |||||||||||| |||||    
T  31042274 ccctctctaaaattccctcactaatttttg 31042245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 197 - 320
Target Start/End: Complemental strand, 23539371 - 23539248
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||| | ||||||||||||| |||||||||||||     
T  23539371 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttaatgacggaattagag 23539272  T
Q  297 agggatttcatgttttccctcact 320  Q
    |||||||||| || ||||||||||    
T  23539271 agggatttcacgtattccctcact 23539248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 195 - 322
Target Start/End: Complemental strand, 33427830 - 33427704
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||| ||||||||| |||||||||| |||||  |||| || ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  33427830 cacactactagaaaaaacaaaattagcgagggaaattagtgaccaaaaa-atgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattag 33427732  T
Q  295 aaagggatttcatgttttccctcactaa 322  Q
    | ||| ||||||||||||||||||||||    
T  33427731 agaggaatttcatgttttccctcactaa 33427704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 211 - 342
Target Start/End: Complemental strand, 22501719 - 22501588
Alignment:
Q  211 gcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtt 310  Q
    ||||||||| ||| | ||||| ||||| ||||| |||||||   |||||||||| |||| ||||||||||| ||||||||||||| |||||||||| |||    
T  22501719 gcaaaattaaggatgaaaattagtgacggaaaaaataaaatctttcacaaattctttggccgcaaaatttaatgacggaattagagagggatttcacgtt 22501620  T
Q  311 ttccctcactaaatttccctcactaacttttg 342  Q
    ||||||| |||||||||||||||||| |||||    
T  22501619 ttccctctctaaatttccctcactaatttttg 22501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 2650827 - 2650949
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| ||||||| || ||||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||    
T  2650827 acactactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattaga 2650926  T
Q  296 aagggatttcatgttttccctca 318  Q
     |||||||| | |||||||||||    
T  2650927 gagggattttacgttttccctca 2650949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 211 - 333
Target Start/End: Complemental strand, 32267471 - 32267350
Alignment:
Q  211 gcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtt 310  Q
    ||||||||||||||||| ||| ||||| ||||| ||||||| ||||||||||| |||| ||||||||||||||||| |||||||| ||||||||   |||    
T  32267471 gcaaaattagggagggagattagtgacggaaaa-ataaaatccctcacaaatttcttgatcgcaaaatttagtgacagaattagagagggattttgcgtt 32267373  T
Q  311 ttccctcactaaatttccctcac 333  Q
    ||||||| |||||||||||||||    
T  32267372 ttccctctctaaatttccctcac 32267350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 15969924 - 15969796
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||| ||| ||||| |||||||  |||||| ||| ||||| ||||| | | ||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  15969924 cactactagaaaaagtaaaattaatgagggatattagtgacggaaaaaaatgaaatttctcacaaattctttggtcgtaaaatttagtgacggaattaga 15969825  T
Q  296 aagggatttcatgttttccctcactaaat 324  Q
     ||| ||||||||||||||||||||||||    
T  15969824 gaggaatttcatgttttccctcactaaat 15969796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 21871707 - 21871566
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||| ||||  ||| | ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||     
T  21871707 cactactagaaaaaacaaaattagcgaggaaaatcagtggcggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga- 21871609  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
       ||||| |  |||||||||||||||||| ||||||||| |||||    
T  21871608 ---gattttacattttccctcactaaattttcctcactaatttttg 21871566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 11890177 - 11890292
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| ||||| ||||| ||||||| ||||| |||||| |||||| ||||||||||||||| | ||||  |||||| |||| ||||||||||||||||||    
T  11890177 aaattagtgacggaaaaaataaaatccctcataaattctttggtctcaaaatttagtgacgaagttagcgagggatatcatattttccctcactaaattt 11890276  T
Q  327 ccctcactaacttttg 342  Q
     |||||||||||||||    
T  11890277 tcctcactaacttttg 11890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 1821996 - 1822118
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| || |||||||||||||||||||   |||| ||||| ||||| |||||||||||||||||||||| | ||  |||||||| ||| |||||||||     
T  1821996 cactactatgaaaagcaaaattagggag---aattagtgacggaaaatataaaattcctcacaaattcctcgatcttaaaatttactgaaggaattagag 1822092  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    || ||||||||||||| |||||||||    
T  1822093 agagatttcatgtttttcctcactaa 1822118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 27130473 - 27130329
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||||| | ||| |||||  ||||  ||||| ||||||| |||||||||||| ||  |||||||| ||||||||||||||||    
T  27130473 cacactactagaaaaagcaaaattcgagagagaaatcagtgatggaaaatataaaatgcctcacaaattcgttaatcgcaaaagttagtgacggaattag 27130374  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
      ||||||||||  ||||||||| |||||||||||||| ||| ||||    
T  27130373 --agggatttcacattttccctctctaaatttccctcattaattttt 27130329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 26415553 - 26415418
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| || ||||||| ||||  ||||| |||||||| ||||||||||  ||| ||| |||||||||||||| ||||| | |||||||| |    
T  26415553 aaaagtaaaattagagaaggaaattagtgatggaaaaaataaaatttctcacaaattttttgatcgtaaaatttagtgacgaaattaaagagggatttta 26415454  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||| |||| ||||| |||||||||||| |||||    
T  26415453 cgtttttcctctctaaaattccctcactaatttttg 26415418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 213 - 342
Target Start/End: Original strand, 25777128 - 25777257
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    ||||||||||| | ||||| |||||  | || ||||||| |||||||||||  ||| ||| |||||||||||| | ||||||| || ||||||| |||||    
T  25777128 aaaattagggaagaaaattagtgaccaataaaataaaatccctcacaaattttttgatcgtaaaatttagtgatgaaattagagagtgatttcacgtttt 25777227  T
Q  313 ccctcactaaatttccctcactaacttttg 342  Q
    ||||| |||||||||||||| ||| |||||    
T  25777228 ccctctctaaatttccctcattaaattttg 25777257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 1841792 - 1841889
Alignment:
Q  206 gaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggattt 304  Q
    |||||||||||||||| || |||||| || | |||||| ||||||| |||||||||||||||| | |||||||||| ||| ||||||||| ||||||||    
T  1841792 gaaaagcaaaattaggaagagaaattagtta-agaaaaaataaaatccctcacaaattccttgattgcaaaatttactgaaggaattagagagggattt 1841889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 38090402 - 38090336
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaatt 263  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  38090402 cactactaggaatagcaaaattagggagggaaatttgtgacggaaaaaataaaatccctcacaaatt 38090336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 2093362 - 2093487
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||| || |||||||||| ||||| ||||| || |||||||||| |||    ||| ||| ||||||||||||||||||||||     
T  2093362 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaaaaaaaatttgatcgaaaaatttagtgacggaattagag 2093461  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    || ||||| | |||||||||||||||    
T  2093462 agagatttgacgttttccctcactaa 2093487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 15330256 - 15330349
Alignment:
Q  248 aaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||| ||  |||||| ||||| ||| ||||||| ||||||| ||| ||||    
T  15330256 aaatttctcacaaatttcttggtcgcaaaatttagtgacagaattagagagaaatttcaagtttttccttactaaatatccctcattaattttt 15330349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 10222630 - 10222773
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| || ||||||||||| ||||| |||||||||||  ||||||| |||| |||||  ||| |||||||||||| |||| ||||||||     
T  10222630 cactactagaaaaaacataattagggaggaaaattagtgacagaaaaagtaaaatttctcataaattt-ttgatcgcaaaatttaatgacagaattagag 10222728  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||| | ||||||  || ||||||||  |||||||| ||||    
T  10222729 agggattttacgttttctttctctaaatttttctcactaattttt 10222773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 198 - 342
Target Start/End: Original strand, 27132722 - 27132866
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| ||||| |||||||| |||||||||| || || ||||| ||||||| | |||||||||  || || ||||||||||||||| |||||||| |    
T  27132722 actactagaaaaagtaaaattagagagggaaattggtaacggaaaaaataaaatccatcacaaatttgtttgttgcaaaatttagtgacagaattagaga 27132821  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |  |||||  ||||| |||| |  ||||||||||||||| |||||    
T  27132822 gatatttcgcgtttttcctctcacaatttccctcactaatttttg 27132866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 687954 - 687871
Alignment:
Q  259 aaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||| |||||||| ||||||||| |||||||| | |||||| |  ||||||||||||||||||| |||||||| |||||    
T  687954 aaattcctttgtcgcaaagtttagtgacagaattagagaaggattttacattttccctcactaaatttctctcactaatttttg 687871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 4e-65; HSPs: 81)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 22083978 - 22083832
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22083978 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaattttgtgacggaattaga 22083879  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||||||||||||| |||||    
T  22083878 gagggatttcatgttttccctcactaaatttccctcactaatttttg 22083832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 12951847 - 12951702
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||     
T  12951847 cactactaggaaaagcaaaattagagagggaaatttgtgacggaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaattagag 12951748  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  12951747 agggatttcatgttttccctcactaaatttccctcactaatttttg 12951702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 18033526 - 18033670
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  18033526 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaa-cattaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 18033624  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||    
T  18033625 agggatttcatgttttccctcattaaatttccctcactaatttttg 18033670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 2992754 - 2992609
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||| |||||| |||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2992754 cactactaggaaaagcataattagcgagggaaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 2992655  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  2992654 agggatttcatgttttccctcactaaatatccctcactaatttttg 2992609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 9893102 - 9892957
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  9893102 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 9893003  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||    
T  9893002 agggatttcacgttttccctcactaaatttccctcactaatttttg 9892957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 196 - 341
Target Start/End: Complemental strand, 11530365 - 11530220
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||  ||| ||||||||||||||||||||||    
T  11530365 acactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcataaatttcttaatcgtaaaatttagtgacggaattaga 11530266  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     | |||||||||||||||||||||||||||| ||||||||| ||||    
T  11530265 gatggatttcatgttttccctcactaaattttcctcactaattttt 11530220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 11077778 - 11077663
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  11077778 aaaagaaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggtattagagagggatttca 11077679  T
Q  307 tgttttccctcactaa 322  Q
    ||||||||||||||||    
T  11077678 tgttttccctcactaa 11077663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 195 - 342
Target Start/End: Original strand, 15364456 - 15364603
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  15364456 cacactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 15364555  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | | |||||| | ||||||||||||||||||||||||||||| |||||    
T  15364556 agaaggattttacgttttccctcactaaatttccctcactaatttttg 15364603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 191 - 342
Target Start/End: Original strand, 24661003 - 24661154
Alignment:
Q  191 gacacacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaa 290  Q
    |||| |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  24661003 gacatacactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaa 24661102  T
Q  291 ttagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||| |||||    
T  24661103 ttagagagagatttcatgttttccctcactaaatatccctcactaatttttg 24661154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 22579348 - 22579494
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||  |||||||||||||||||||||||||||||    
T  22579348 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaattaga 22579447  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| |||||||||||| |||||||||||||||| |||||    
T  22579448 gagggatttcacgttttccctcacaaaatttccctcactaatttttg 22579494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 28365051 - 28364905
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28365051 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattaga 28364952  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||| | ||||||||||||||||||||||||||||| |||||    
T  28364951 gagggattttacgttttccctcactaaatttccctcactaatttttg 28364905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 6598603 - 6598458
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||     
T  6598603 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattacttggtcgcaaaatttagtgacggaattagag 6598504  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||    
T  6598503 agggatttcaagttttccctcactaaatatccctcactaatttttg 6598458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 6978417 - 6978273
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||||||||||||||||||||||| |||||||||| || || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6978417 acactattaggaaaagcaaaattagcgagggaaattagttacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 6978318  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||| ||||||||||||  |||||||||| ||||||||||| |||||    
T  6978317 gaggaatttcatgtttt--ctcactaaatatccctcactaatttttg 6978273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 203 - 322
Target Start/End: Complemental strand, 14872252 - 14872133
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  14872252 taggaaaagaaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattccttggttccaaaatttagtgacggaattagagagggat 14872153  T
Q  303 ttcatgttttccctcactaa 322  Q
    ||||||||||||||||||||    
T  14872152 ttcatgttttccctcactaa 14872133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 25398131 - 25397997
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  25398131 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttta 25398032  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     ||||||||||||||||||||||||||||| ||||    
T  25398031 cgttttccctcactaaatttccctcactaattttt 25397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 26224567 - 26224422
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| ||||||| |||||||||||||||||||||||     
T  26224567 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcacaaaatttagtgacggaattagag 26224468  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||    
T  26224467 agggatttcatgttttccctcactaaatatccctcgctaatttttg 26224422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 495627 - 495766
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||  ||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  495627 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 495726  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    || ||||| | |||||||||||||||||||||||||||||    
T  495727 agtgattttacgttttccctcactaaatttccctcactaa 495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 12200823 - 12200688
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  12200823 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgagggaattagagagggatttca 12200724  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||||||||||||| ||||||||||| |||||    
T  12200723 tattttccctcactaaatatccctcactaatttttg 12200688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 14886690 - 14886555
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||| ||||||| |||| ||||||| |||||||||||||||||||||| |||||||| |    
T  14886690 aaaagcaaaattagggaggaaaattagtgacagaaaaaataaaatccctcacatattctttggtcgtaaaatttagtgacggaattagagagggatttga 14886591  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||| ||||||||| |||||    
T  14886590 tgttttccctcactaaattttcctcactaatttttg 14886555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 11049750 - 11049896
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| |||||||||  ||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11049750 acactactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 11049849  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     || ||||||||||||||||||||||||| || |||||||| |||||    
T  11049850 gagagatttcatgttttccctcactaaatatctctcactaatttttg 11049896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 26939726 - 26939581
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||  |||||||||| |||||| |||| || |||||||||||||||| |||||||||||||||||||||||||||||||     
T  26939726 cactactagaaaaagtaaaattactgagggaaattagtgacaaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagag 26939627  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| || |||||||| |||||    
T  26939626 agggatttcatgttttccctcactaaatatctctcactaatttttg 26939581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 1939241 - 1939387
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||  |||||||||||||||| |||||||||||||    
T  1939241 acactactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaattttttggtcgcaaaatttaatgacggaattaga 1939340  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||||||||||| |||||| ||| ||||||||||| |||||    
T  1939341 gagggatttcatgttttctctcactgaatatccctcactaatttttg 1939387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 18048927 - 18048783
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| |||||||| ||||||||| |||| ||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||  |||||||      
T  18048927 cactactaggaaaaacaaaattagagaggaaaattagtgacggaaaaaataaaatttctcacaaattcgttggtcgcaaaatttagtgagagaattaggg 18048828  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||    
T  18048827 agggatttcatgtttttcctcactaaatttccctcactaattttt 18048783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 21141068 - 21140933
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||  |||||||||| ||||| ||||| || ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  21141068 aaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcccaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 21140969  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  21140968 cgttttccctcacaaaatttccctcactaatttttg 21140933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 215 - 341
Target Start/End: Complemental strand, 12845124 - 12844998
Alignment:
Q  215 aattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttcc 314  Q
    ||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||| |||||||    
T  12845124 aattagggagggaaattagtgacggaaaaaataaaattgctcacaaattctttggtcgcaaaatttagtgacggaattagagagagatttcacgttttcc 12845025  T
Q  315 ctcactaaatttccctcactaactttt 341  Q
    ||| |||||||| ||||||||| ||||    
T  12845024 ctctctaaattttcctcactaattttt 12844998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 14772800 - 14772690
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  14772800 cactattagaaaaagcaaaattagggagagaaatttgtgacgaaaaacataaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagag 14772701  T
Q  297 agggatttcat 307  Q
    || ||||||||    
T  14772700 agagatttcat 14772690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 204 - 342
Target Start/End: Original strand, 22055619 - 22055757
Alignment:
Q  204 aggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatt 303  Q
    ||||||| ||||||||| ||||||||||  |||||||||| |||||||||||||||||||| |||||| ||||||| | ||| ||||||||| |||||||    
T  22055619 aggaaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcacaaattcgttggtcacaaaattcaatgagggaattagagagggatt 22055718  T
Q  304 tcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||| |||||||||| |||||||||||| |||||    
T  22055719 tcatgtttttcctcactaaacttccctcactaatttttg 22055757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 33250723 - 33250853
Alignment:
Q  212 caaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttt 311  Q
    ||||||||  |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  33250723 caaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagaggaatttcatgttt 33250822  T
Q  312 tccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||| || |||||||| |||||    
T  33250823 tccctcactaaatatctctcactaatttttg 33250853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 2669448 - 2669303
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||  |||||||||| |||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  2669448 cactactagaaaaagcaaaattaacgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 2669349  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| |||| | ||||| || |||||||||||||||||||| |||||    
T  2669348 aggaattttacgtttttccacactaaatttccctcactaatttttg 2669303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 20182284 - 20182139
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||| | || ||||||||||||||||||||||||||     
T  20182284 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaattagag 20182185  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||||||||||| |||||| ||||||||| |||||    
T  20182184 agggatttcacgttttccctcacaaaatttgcctcactaatttttg 20182139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 195 - 336
Target Start/End: Original strand, 21990173 - 21990313
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||||||| ||||||||||  |||| ||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  21990173 cacactactagaaaaagcaaaattagcgagggaaattaatgacggaaaa-atgaaattcctcacaaatttcttggtcgcaaaaattagtgacggaattag 21990271  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaa 336  Q
    | |||||||| | ||||||||||||||||||| |||||||||    
T  21990272 agagggattttacgttttccctcactaaattttcctcactaa 21990313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 22153707 - 22153852
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||| | || ||||||||||||||||||||||||||     
T  22153707 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaattagag 22153806  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||||||||||| |||||| ||||||||| |||||    
T  22153807 agggatttcacgttttccctcacaaaatttgcctcactaatttttg 22153852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 12351586 - 12351730
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| | ||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||     
T  12351586 cactactagaaaaagtataattaaggagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttaatgacggaattagag 12351685  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    ||  |||||| |||||||||| |||||||||||||||||| ||||    
T  12351686 agaaatttcacgttttccctctctaaatttccctcactaattttt 12351730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 198 - 342
Target Start/End: Original strand, 27796835 - 27796979
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||||||||||||| |||||||||| |||||  |||| || | ||| |||| |||||||||| | |||||||||||||||||||||||| |    
T  27796835 actactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgatatttctcataaattccttgattgcaaaatttagtgacggaattagaga 27796934  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||    
T  27796935 gggatttcatgttttccctcactaaatatccctcactaatttttg 27796979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 6605496 - 6605621
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| ||| |||||||||| ||||||||||||||||     
T  6605496 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttagtcgcaaaatatagtgacggaattagag 6605595  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    || |||||||||||||||||||||||    
T  6605596 agagatttcatgttttccctcactaa 6605621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 15448524 - 15448395
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||  |||||||||||| |||||||||||||     
T  15448524 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttaatgacggaattagag 15448425  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| | |||||||||||||||||||    
T  15448424 agggattttacgttttccctcactaaattt 15448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 27705519 - 27705416
Alignment:
Q  239 gaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaact 338  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| |    
T  27705519 gaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctcactaatt 27705420  T
Q  339 tttg 342  Q
    ||||    
T  27705419 tttg 27705416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 9885382 - 9885237
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||| ||||||||||||| ||||| ||||| |||||||  ||||||||||  ||||| |||||||||||||||  ||||| |     
T  9885382 cactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttgttggttgcaaaatttagtgacaaaattaaag 9885283  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||| | ||||||| |||||    
T  9885282 agggatttcatgttttccctcactaaattttcgtcactaatttttg 9885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 16250802 - 16250946
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||  |||||||||| ||||| ||||| || |||||||||||||||| | || ||||||||||||||||| ||||||||     
T  16250802 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacagaattagag 16250901  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    || ||||||| |||||||||||| ||||||| |||||||| ||||    
T  16250902 agagatttcacgttttccctcacaaaatttctctcactaattttt 16250946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 221 - 341
Target Start/End: Complemental strand, 23281901 - 23281781
Alignment:
Q  221 ggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcact 320  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||| ||||||||||||     
T  23281901 ggagggaaattagtgatggaaaaaataaaattcctcacaaattttatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcaca 23281802  T
Q  321 aaatttccctcactaactttt 341  Q
    ||||||||||| |||| ||||    
T  23281801 aaatttccctccctaattttt 23281781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 198 - 317
Target Start/End: Complemental strand, 5360547 - 5360428
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||||||||||||| |||||||||| ||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||||||| |    
T  5360547 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattttttggtcgcaaaatttagtgacggaattagaga 5360448  T
Q  298 gggatttcatgttttccctc 317  Q
    | ||||| | ||||||||||    
T  5360447 gagattttacgttttccctc 5360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 18492498 - 18492363
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| || | ||||| ||||| ||||| || ||||| |||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  18492498 aaaagcaaaattagcgatgcaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgcaaaatttagtgacggaattagagtgggatttca 18492399  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||| || ||||||| |||||||| |||||    
T  18492398 cgttttcccttacaaaatttctctcactaatttttg 18492363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 30833960 - 30834099
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||| ||||  |||||||||||||||| |||| ||||||||     
T  30833960 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcactaattttttggtcgcaaaatttaatgacagaattagag 30834059  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| | ||| ||||||||||||||||| |||||||    
T  30834060 agggattttacgttctccctcactaaatttccttcactaa 30834099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 28668240 - 28668114
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| |||||||||  ||||| ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  28668240 acactactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacggaattaga 28668141  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
    ||||||||| |   |||||||||||||    
T  28668140 aagggattttacaatttccctcactaa 28668114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 203 - 322
Target Start/End: Complemental strand, 11350312 - 11350196
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||   |||||||||||  ||||||||||||||||| |||||||| || |||    
T  11350312 taggaaaagcaaaattagggagggaaatttgtgacggaaaacaaaaaaatc---acaaattccttaatcgcaaaatttagtgacagaattagagagcgat 11350216  T
Q  303 ttcatgttttccctcactaa 322  Q
    || |||||||||||||||||    
T  11350215 tttatgttttccctcactaa 11350196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 5192199 - 5192314
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||| ||||| ||||  ||||| || ||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||| |    
T  5192199 aaaagcaaaattagcgaggaaaattagtgaaggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagagggatttta 5192298  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  5192299 cgttttccctcactaa 5192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 6065577 - 6065451
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||||||||||||||||||||||| |||||  |||| ||||| |||||||  ||||||||||| ||| |||||||||||| ||||  |||||||    
T  6065577 acactattaggaaaagcaaaattagggaggaaaattaatgacggaaaaaataaaatctctcacaaattctttgatcgcaaaatttaatgacaaaattaga 6065478  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||| ||||| ||||||||||||||||    
T  6065477 gaggaatttcttgttttccctcactaa 6065451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 9060230 - 9060085
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||||| || |||||||||||||  ||| |||||| ||||| ||||| ||||||| |||||||||||  ||||||||||||||||||||| ||||||||    
T  9060230 acactataagaaaaagcaaaattaaagagcgaaattagtgacggaaaaaataaaatccctcacaaattttttggtcgcaaaatttagtgacagaattaga 9060131  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||  |||||||| |||||||| |||||||||| ||||||| |||||    
T  9060130 gagaaatttcatg-tttccctcgctaaatttccttcactaatttttg 9060085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 12160846 - 12160991
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| |||||||||| |||||  |||| || ||||||||||||||||  ||| ||| |||||||||||||| |||||||    
T  12160846 acactactagaaaaagtaaaattagcgagggaaattagtgacgtaaaaaatgaaattcctcacaaattttttgatcg-aaaatttagtgacgaaattaga 12160944  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||| ||||||||||||||||||| | ||||||||| |||||    
T  12160945 gagggattttatgttttccctcactaaatattcctcactaatttttg 12160991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 21691505 - 21691641
Alignment:
Q  207 aaaagcaaaattagggagggaaattt-gtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttc 305  Q
    ||||| |||||||| |||||||| || ||||   |||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  21691505 aaaagtaaaattagagagggaaaattagtgatgaaaaaaataaaatttctcacaaattctttggtcgcaaaatttagtgacgaaattagagagggatttc 21691604  T
Q  306 atgttttccctcactaaatttccctcactaacttttg 342  Q
    | ||||| |||| ||||| |||||||||||| |||||    
T  21691605 acgtttttcctctctaaaattccctcactaatttttg 21691641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 12499345 - 12499230
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||| ||||||||| |||||||| | ||||| ||||| || ||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| |    
T  12499345 aaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttta 12499246  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  12499245 cgttttccctcactaa 12499230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 12506674 - 12506559
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||| ||||||||| |||||||| | ||||| ||||| || ||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| |    
T  12506674 aaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttta 12506575  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  12506574 cgttttccctcactaa 12506559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 12509556 - 12509671
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||| ||||||||| |||||||| | ||||| ||||| || ||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| |    
T  12509556 aaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttta 12509655  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  12509656 cgttttccctcactaa 12509671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 14036708 - 14036614
Alignment:
Q  248 aaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||| || |||||||||||| |||| |||||||| |||||||||| |||||||||||| |||||||||||||||| |||||    
T  14036708 aaattcctcacaaattccatgatcgcaaaatttaatgacagaattagagagggatttcacgttttccctcacaaaatttccctcactaatttttg 14036614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 15961406 - 15961532
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||  |||||||||| ||||| ||||| || |||||||| ||||||| |||| |||||||||||||| |||||||||||    
T  15961406 acactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattccttacaaatttcttgatcgcaaaatttagtaacggaattaga 15961505  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||| |||| | |||||||||||||||    
T  15961506 gaggaattttacgttttccctcactaa 15961532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 16118286 - 16118140
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||||||| | ||||||||||| ||||||| ||||| |||||  ||||||  || |||||||||| | |||||||||||| ||||| |||||||    
T  16118286 acactattaggaaaggtaaaattagggacggaaattagtgacggaaaaactaaaatctcttacaaattcctcgatcgcaaaatttaatgacgaaattaga 16118187  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     || ||||||||||| ||||||| |||||||  |||||||| |||||    
T  16118186 gagagatttcatgttctccctcattaaatttttctcactaatttttg 16118140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 17919675 - 17919530
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| ||| |||||   |||| ||||| || |||||| ||| |||||||||||||||||||||||||||||||||||||     
T  17919675 cactactagaaaaaacaaaattagcgagagaaatcaatgacggaaaaaatgaaattcatcataaattccttggtcgcaaaatttagtgacggaattagag 17919576  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| |   ||||||||| || |||||||||||||| |||||    
T  17919575 agggattttacagtttccctcattacatttccctcactaatttttg 17919530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 203 - 322
Target Start/End: Complemental strand, 1955013 - 1954895
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||||||||||||||||| ||||||||  ||||| ||||| ||||||||| ||||||||| ||||||| |||||||| |||| ||||||| | | ||||    
T  1955013 taggaaaagcaaaattaggaagggaaatgagtgacggaaaaaataaaattcgtcacaaatttcttggtcacaaaattttgtgatggaattataga-ggat 1954915  T
Q  303 ttcatgttttccctcactaa 322  Q
    |||||||||||| |||||||    
T  1954914 ttcatgttttccttcactaa 1954895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 13145099 - 13145016
Alignment:
Q  239 gaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||||||    
T  13145099 gaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaaagagagatttcacgttttccctcactaa 13145016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 15509285 - 15509186
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||    
T  15509285 aaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcggaaaatttagtgacggaattagagagggatttca 15509186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 33547643 - 33547560
Alignment:
Q  239 gaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  33547643 gaaaaaataaaatccctcacaaattctttggtcgcaaaatttagtgacaaaattagatagggatttcatgttttccctcactaa 33547560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 227 - 341
Target Start/End: Original strand, 343593 - 343707
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| |||||  |||| || ||||||||||||||||  ||||||||||| ||||||||| |||||||| |||||||| | ||||||||||| |||||||    
T  343593 aaattagtgacgtaaaaaatgaaattcctcacaaattttttggtcgcaaattttagtgacagaattagagagggattttacgttttccctcattaaattt 343692  T
Q  327 ccctcactaactttt 341  Q
    |||||||||| ||||    
T  343693 ccctcactaattttt 343707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 207 - 341
Target Start/End: Original strand, 12680195 - 12680328
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| ||||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||| ||| ||| |||||||| ||||||||||||| ||| ||||||    
T  12680195 aaaagaaaaattaaggagg-aaattagtgacggaaaaaataaaattgctcacgaattctttgatcgtaaaatttaatgacggaattagagaggaatttca 12680293  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||| |||||||| ||||||||| ||||    
T  12680294 cgttttccctctctaaattttcctcactaattttt 12680328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 207 - 335
Target Start/End: Original strand, 12157386 - 12157514
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||||||| ||||||||||| ||||| ||||| ||||||| ||| ||||| || ||||||  |||||||||||||||||||||| |  |||||||    
T  12157386 aaaagcaaaattaaggagggaaattagtgacggaaaaaataaaatcccttacaaaatctttggtcataaaatttagtgacggaattagagaatgatttca 12157485  T
Q  307 tgttttccctcactaaatttccctcacta 335  Q
    | ||||  ||| |||||||| ||||||||    
T  12157486 tatttttgctctctaaattttcctcacta 12157514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 19175828 - 19175921
Alignment:
Q  248 aaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||| |  |||||||||||| |||||||||| |||| |||||    
T  19175828 aaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagaggaattttacattttccctcact-aatttccctctctaatttttg 19175921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 197 - 317
Target Start/End: Original strand, 12205185 - 12205305
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    |||| |||| ||||| ||||||||| || |||||| ||||| |||||||| ||||| ||||||||||| |   ||| |||||||||||||||||||||      
T  12205185 cactcttagaaaaagtaaaattaggaagagaaattagtgacggaaaacattaaatttctcacaaattcttaaatcgtaaaatttagtgacggaattagtg 12205284  T
Q  297 agggatttcatgttttccctc 317  Q
    |||||||||| ||||||||||    
T  12205285 agggatttcacgttttccctc 12205305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 10458902 - 10458807
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 293  Q
    |||| ||| ||||| |||||||| |||||||||| ||||| ||||| || || |||||||||||||||||||| |||||||||||||| |||||||    
T  10458902 actactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaatttcctcacaaattccttggttgcaaaatttagtgatggaatta 10458807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 196 - 318
Target Start/End: Original strand, 10929495 - 10929618
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcc-tcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    |||||| | |||||| |||||||||||| | ||||| ||||| ||||| || |||| || ||||||||||||| ||||||||||||| ||||||||| |     
T  10929495 acactacttggaaaatcaaaattagggaagaaaattagtgacggaaaaaattaaatcccctcacaaattcctttgtcgcaaaatttaatgacggaatcaa 10929594  T
Q  295 aaagggatttcatgttttccctca 318  Q
    | || |||||||||||||||||||    
T  10929595 agagagatttcatgttttccctca 10929618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 20692811 - 20692936
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    |||| |||| |||| ||||||||  |||| ||||| ||||| ||||| ||||||||| | | || ||  |||||||||||||||||||||| |||||||     
T  20692811 cactgttagaaaaaacaaaattaacgaggaaaattagtgacggaaaaaataaaattctttataagttttttggtcgcaaaatttagtgacgaaattagag 20692910  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| | |||||||||||||||    
T  20692911 agggattttacgttttccctcactaa 20692936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 341
Target Start/End: Original strand, 11431634 - 11431784
Alignment:
Q  192 acacacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca--taaaattcctcacaaattccttggtcgcaaaatttagtgacgga 289  Q
    |||||||||| || |||||| ||||||||||||  ||||| ||||| ||||| |  ||||||  ||||||||||| ||  | ||||||||||||||||||    
T  11431634 acacacactactaagaaaagtaaaattagggagaaaaattagtgacggaaaaaaaataaaatctctcacaaattctttatt-gcaaaatttagtgacgga 11431732  T
Q  290 attagaaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||| | |||||| ||  ||||| |||| |||||||||||||||||| ||||    
T  11431733 attaaagagggatatcgcgtttttcctctctaaatttccctcactaaatttt 11431784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 227 - 341
Target Start/End: Complemental strand, 5270502 - 5270387
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttgg-tcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatt 325  Q
    ||||||||||  ||||| |||||||| ||||||||||  || | ||| |||||||||||||||||||||| ||| ||||||  ||||||||| ||||| |    
T  5270502 aaatttgtgatggaaaaaataaaatttctcacaaatttttttgatcgtaaaatttagtgacggaattagagaggaatttcacattttccctctctaaaat 5270403  T
Q  326 tccctcactaactttt 341  Q
    ||||||||||| ||||    
T  5270402 tccctcactaattttt 5270387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 5250279 - 5250195
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaattt 280  Q
    |||||| ||| ||||| ||||| || |||||||||| ||||| ||||| || |||||||||| ||||| ||||||||||||||||    
T  5250279 acactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcataaatttcttggtcgcaaaattt 5250195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 3673184 - 3673231
Alignment:
Q  248 aaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  3673184 aaattcctcacaaattttttggtcgtaaaatttagtgacggaattaga 3673231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 28221730 - 28221647
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaattta 281  Q
    ||||||||||||| |||||| ||||||||||||| ||||  ||||| |||||||| |||| |||||  ||| ||||||| ||||    
T  28221730 actattaggaaaaacaaaatcagggagggaaattagtgagggaaaaaataaaatttctcataaattttttgatcgcaaacttta 28221647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 285
Target Start/End: Complemental strand, 28234123 - 28234036
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtga 285  Q
    |||||||||||||||||||| | |||| ||||||  |||  ||||| |||||||| ||||||||||  ||||||| ||| ||||||||    
T  28234123 actattaggaaaagcaaaatcaaggagcgaaattaatgagggaaaaaataaaatttctcacaaatttattggtcgtaaactttagtga 28234036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 30745718 - 30745853
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| | ||||||||||| ||||||||   |||| |||| |||||| |||||||   | |||||||  ||| ||| |||||||||||||||| ||||     
T  30745718 acactacttggaaaagcaaagttagggagaagaattagtgatagaaaaaataaaatcatttacaaattttttgatcgtaaaatttagtgacggacttag- 30745816  T
Q  296 aagggatttcatgttttccctcactaaatttccctcac 333  Q
     || ||||||| |||||||||| |||| |||| |||||    
T  30745817 -agagatttcacgttttccctctctaattttctctcac 30745853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 8844167 - 8844252
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctc-acaaattccttggtcgcaaaattt 280  Q
    |||||| ||| ||||| ||||| ||||||||||||| ||||| ||||| |||||||  ||| |||||||  |||||||||||||||    
T  8844167 acactactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaatctctcaacaaatttattggtcgcaaaattt 8844252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 16764893 - 16764825
Alignment:
Q  254 ctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||||||||  || ||| ||||||| || ||  |||||||||||||||||||||||||||||| ||||    
T  16764893 ctcacaaatttttttgtcacaaaattcagggatagaattagaaagggatttcatgttttccctctctaa 16764825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 9878515 - 9878596
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatt 279  Q
    ||||| ||| ||||||||||||| |||||||| || ||||  ||||| ||||||| ||| |||||||| ||||||| ||||||    
T  9878515 cactaatagaaaaagcaaaattatggagggaatttagtgatggaaaa-ataaaatccctaacaaattctttggtcgtaaaatt 9878596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 33637058 - 33636980
Alignment:
Q  258 caaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||| |||| ||| |||||||| ||| | ||||| | ||  |||| |||||||||||||||||| ||||||||||||    
T  33637058 caaatttcttgatcgtaaaatttaatgatgaaattatagagaaattttatgttttccctcactaaacttccctcactaa 33636980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 312
Target Start/End: Original strand, 7000881 - 7000998
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacag-aaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| || |||||||||||||| |||||||||  |||| || |||| || |||| ||||||||||| | | ||| || |||||||||| | |||||     
T  7000881 acactatcagtaaaagcaaaattagtgagggaaatcagtgatagaaaaaaatgaaatccctcacaaatttcatagtcacagaatttagtgaagaaattat 7000980  T
Q  295 aaagggatttcatgtttt 312  Q
      ||| ||||||||||||    
T  7000981 tgaggtatttcatgtttt 7000998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 4e-65; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 197 - 335
Target Start/End: Complemental strand, 19610473 - 19610335
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19610473 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 19610374  T
Q  297 agggatttcatgttttccctcactaaatttccctcacta 335  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19610373 agggatttcatgttttccctcactaaatttccctcacta 19610335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 16299996 - 16299851
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  16299996 cactactaggaaaagcaaaattagggagcgaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 16299897  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||    
T  16299896 agggatttcatgttttccctcaccaaatttccctcactaatttttg 16299851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 29216127 - 29215982
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  29216127 cactactaggaaaagcaaaattatggaggaaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagag 29216028  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  29216027 agggatttcatgttttccctcactaaatttccctcactaatttttg 29215982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 30219474 - 30219328
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  30219474 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaattttttggtcgcaaaatttagtgacggaattaga 30219375  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||| ||||||||||||||||||||||| |||||    
T  30219374 gagggatttcatgtttttcctcactaaatttccctcactaatttttg 30219328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 15063991 - 15064117
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15063991 acactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 15064090  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     || |||||||||||||||||||||||    
T  15064091 gagagatttcatgttttccctcactaa 15064117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 19269863 - 19270009
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |    
T  19269863 acactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaaa 19269962  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||| | ||||||||||||||||||||||||||||| |||||    
T  19269963 gagggattttacgttttccctcactaaatttccctcactaatttttg 19270009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 195 - 336
Target Start/End: Complemental strand, 25882707 - 25882566
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  25882707 cacactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattag 25882608  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaa 336  Q
    | |||||||||||||||||||||||||||| |||||||||||    
T  25882607 agagggatttcatgttttccctcactaaatatccctcactaa 25882566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 18104529 - 18104675
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| ||||||||||  |||| ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  18104529 acactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaattaaattcctcacaaattccatggtcgcaaaatttagtgacggaattaga 18104628  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||||||||||||||||| |||||||||||||||| |||||    
T  18104629 gagggatttcatgttttccctcacaaaatttccctcactaatttttg 18104675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 5744551 - 5744426
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||     
T  5744551 cactactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcacaaattccttagtcgcaaaatttagtgacggaattagag 5744452  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    || |||||||||||||||||||||||    
T  5744451 agagatttcatgttttccctcactaa 5744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 5781510 - 5781385
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||     
T  5781510 cactactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcacaaattccttagtcgcaaaatttagtgacggaattagag 5781411  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    || |||||||||||||||||||||||    
T  5781410 agagatttcatgttttccctcactaa 5781385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 27449223 - 27449078
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||     
T  27449223 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagag 27449124  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||    
T  27449123 agggattttacgttttccctcactaaatttccctcactaatttttg 27449078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 49915586 - 49915441
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| || |||||| |||||||  |||||||||||||||| ||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||     
T  49915586 cactactaagaaaagtaaaattaaagagggaaatttgtgacggaaaacataaaatccctaacaaatttcttagtcgcaaaatttagtgacggaattagag 49915487  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  49915486 agggatttcatgttttccctcactaaatttccctcactaatttttg 49915441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 5261072 - 5260933
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  5261072 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 5260973  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| | |||||||||||||| ||||||||||||||    
T  5260972 agggattttacgttttccctcactatatttccctcactaa 5260933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 21020200 - 21020055
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||     
T  21020200 cactactaggaaaagcaaaattagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggttgcaaaatttagtgacggaattagag 21020101  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||| |||||||||||||||||| | |||||||||| |||||    
T  21020100 aaggattttatgttttccctcactaaactgccctcactaatttttg 21020055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 306
Target Start/End: Complemental strand, 37283658 - 37283549
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||     
T  37283658 cactattaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcataaaatttagtgacggaattagag 37283559  T
Q  297 agggatttca 306  Q
    ||||||||||    
T  37283558 agggatttca 37283549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 198 - 342
Target Start/End: Complemental strand, 11915892 - 11915748
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||| |    
T  11915892 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagaga 11915793  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||    
T  11915792 gggattttacgttttccctcactaaatttccctcactaaattttg 11915748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 18091557 - 18091692
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||| |    
T  18091557 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggaattagagagggatttta 18091656  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||| ||||||||||| |||||    
T  18091657 tgttttccctcactaaatatccctcactaatttttg 18091692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 19223584 - 19223445
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||     
T  19223584 cactactagaaaaagcaaaattagcgagggaaattggtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagag 19223485  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| | |||||||| ||||||||||||||||||||    
T  19223484 agggattttacgttttcccccactaaatttccctcactaa 19223445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 8110475 - 8110329
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  8110475 acactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcggaaaatttaatgacggaattaga 8110376  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||| |||| | ||||||||||||||||||||||||||||| |||||    
T  8110375 gaggaattttacgttttccctcactaaatttccctcactaatttttg 8110329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 17762762 - 17762632
Alignment:
Q  212 caaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttt 311  Q
    ||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  17762762 caaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagagcgatttcatgttt 17762663  T
Q  312 tccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||| ||||||||||| |||||    
T  17762662 tccctcactaaatatccctcactaatttttg 17762632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 19064082 - 19063952
Alignment:
Q  212 caaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttt 311  Q
    ||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  19064082 caaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagagcgatttcatgttt 19063983  T
Q  312 tccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||| ||||||||||| |||||    
T  19063982 tccctcactaaatatccctcactaatttttg 19063952  T

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Target: chr3; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 26390633 - 26390779
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| ||| |||||| ||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  26390633 acactactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattaga 26390732  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||| |||||||| |||| ||||||||||| |||||    
T  26390733 gagggatttcatgttatccctcacaaaatatccctcactaatttttg 26390779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 8428290 - 8428161
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    |||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||    
T  8428290 aaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagagagatttcatgtttt 8428191  T
Q  313 ccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||| ||||||||||| |||||    
T  8428190 ccctcactaaatatccctcactaatttttg 8428161  T

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Target: chr3; HSP #24
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 26098948 - 26098823
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||  ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  26098948 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 26098849  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    ||||||||||||||||||||||||||    
T  26098848 agggatttcatgttttccctcactaa 26098823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 48404995 - 48404866
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  48404995 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 48404896  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| | |||||||||||||||||||    
T  48404895 agggattttacgttttccctcactaaattt 48404866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 50665636 - 50665761
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| || ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||     
T  50665636 cactactaagaaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcacaaattctttgatcgcaaaatttagtgacgaaattagag 50665735  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    ||||||||||||||||||||||||||    
T  50665736 agggatttcatgttttccctcactaa 50665761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 11007683 - 11007827
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||  ||||||||| ||||| ||||| || |||||| ||||||||| |||||||||||||||||||||||||||||||     
T  11007683 cactactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcgtcacaaatttcttggtcgcaaaatttagtgacggaattagag 11007782  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||    
T  11007783 agggattttacgttttccctcactaaatttccctcactaattttt 11007827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 195 - 342
Target Start/End: Complemental strand, 9652715 - 9652568
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||||| | |||||||||| ||||| ||||| || |||||||||||||||| | | ||||||||||||||||||||||||||    
T  9652715 cacactactagaaaaagcaaaattggcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaattag 9652616  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||||||| |||||||||||| |||||||||||||||| |||||    
T  9652615 agagggatttcacgttttccctcacaaaatttccctcactaatttttg 9652568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 18539929 - 18539794
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  18539929 aaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcaaaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 18539830  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  18539829 cgttttccctcacaaaatttccctcactaatttttg 18539794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 13921461 - 13921331
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||| ||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13921461 acactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 13921362  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     |||||||| | |||||||||||||||||||    
T  13921361 gagggattttacgttttccctcactaaattt 13921331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 26830441 - 26830587
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||||||| ||||| ||||||||||||| |||||  |||| ||||| | |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  26830441 cactattagaaaaagaaaaattagggaggaaaattaatgacggaaaaaaataaaattcctcacaaattccatggtcgcaaaattttgtgacggaattaga 26830540  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| |||||||||| |||||||||||||||||| |||||    
T  26830541 gagggatttcacgttttccctctctaaatttccctcactaatttttg 26830587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 29956507 - 29956362
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||  ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29956507 cactactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaa 29956408  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||  ||||||||||| |||||||||||| ||| |||||    
T  29956407 agggatttcacattttccctcacaaaatttccctcattaatttttg 29956362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 30005662 - 30005517
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||  ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30005662 cactactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaa 30005563  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||  ||||||||||| |||||||||||| ||| |||||    
T  30005562 agggatttcacattttccctcacaaaatttccctcattaatttttg 30005517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 196 - 335
Target Start/End: Original strand, 1310958 - 1311097
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||||||  ||| ||||| ||||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1310958 acactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaaatcctcacaaattccttggtcgcaaaatttagtgacggaattaga 1311057  T
Q  296 aagggatttcatgttttccctcactaaatttccctcacta 335  Q
     |||||||| | ||||||| ||||||||||||||||||||    
T  1311058 gagggattttacgttttccatcactaaatttccctcacta 1311097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 4393360 - 4393495
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || ||||| |||||||||| |  |||||||||||||||||||||||||||| ||||||||||    
T  4393360 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaatttcacggtcgcaaaatttagtgacggaattagagagggatttca 4393459  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  4393460 cgttttccctcacaaaatttccctcactaatttttg 4393495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 197 - 324
Target Start/End: Original strand, 10941665 - 10941792
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||  ||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||     
T  10941665 cactactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagag 10941764  T
Q  297 agggatttcatgttttccctcactaaat 324  Q
    |||||||||||||||||||||| |||||    
T  10941765 agggatttcatgttttccctcattaaat 10941792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 17582331 - 17582446
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  17582331 aaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 17582430  T
Q  327 ccctcactaacttttg 342  Q
    |||||||||| |||||    
T  17582431 ccctcactaatttttg 17582446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 21816856 - 21816727
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  21816856 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 21816757  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    ||| |||| | |||||||||||||||||||    
T  21816756 aggaattttacgttttccctcactaaattt 21816727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 29236179 - 29236050
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| |||||||||||||| |||||||||| ||||| ||||| || ||||| |||||||| | |||||||||||||||||||||||||||||||     
T  29236179 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaaattcttggtcgcaaaatttagtgacggaattagag 29236080  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| | |||||||||||||||||||    
T  29236079 agggattttacgttttccctcactaaattt 29236050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 36543884 - 36543739
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||||||||||| ||||| ||||  ||||| |||||||  |||||| |||| |||||||||||||||||||||| |||||||     
T  36543884 cactactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaatctctcacagattctttggtcgcaaaatttagtgacgaaattagag 36543785  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||    
T  36543784 agggatttcatgttttccctcacaaaatttccctcactaatttttg 36543739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 21088886 - 21088758
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| || |||||||||| ||||||||||||||| ||||| ||||| |||||||  |||||||||||||||||||||||||||  |||||||||| ||    
T  21088886 acactactaagaaaagcaaagttagggagggaaattagtgacggaaaaaataaaat--ctcacaaattccttggtcgcaaaatttgatgacggaattcga 21088789  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     ||||||||||||||||||||||||||||||    
T  21088788 gagggatttcatgttttccctcactaaattt 21088758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 1628340 - 1628206
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||||||||||||||  |||  ||||| ||||||||||||| ||||||||| |||| |||||||||||||| ||||||| ||||||||||    
T  1628340 aaaagtaaaattagggagggaaattaatgatggaaaaaataaaattcctcataaattccttagtcgtaaaatttagtgacgaaattagagagggatttca 1628241  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||| |||||||||||||||||| ||||    
T  1628240 cgttttccctctctaaatttccctcactaattttt 1628206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 13905037 - 13905163
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| ||| |||||| ||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  13905037 acactactagaaaaagcaaaattagagagcgaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 13905136  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     |||||||| | |||||||||||||||    
T  13905137 gagggattttacgttttccctcactaa 13905163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 28390098 - 28389964
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| ||||| || |||| ||||| ||||| ||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  28390098 aaaagtaaaatcagagaggaaaattagtgacggaaaaaataaaatctctcacaaattcgttggtcgcaaaatttagtgacggaattagagaaggatttca 28389999  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     ||||||||||||||||||||||||||||| ||||    
T  28389998 cgttttccctcactaaatttccctcactaattttt 28389964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 3461310 - 3461435
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||| |||| |||||||||||| |||||||||||||     
T  3461310 cactactagaaaaagcaaaattagcgaaggaaattagtgacagaaaaaataaaattcctcacaaatttcttgatcgcaaaatttaatgacggaattagag 3461409  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| | |||||||||||||||    
T  3461410 agggattttacgttttccctcactaa 3461435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 7623531 - 7623676
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||| || |||||||||| ||||| ||||| || ||||| |||||| |||| ||||||||||||||||||||||||||||||     
T  7623531 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaatttctcacagattctttggtcgcaaaatttagtgacggaattagag 7623630  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||  ||||||||||| |||||||||||||||| |||||    
T  7623631 agggatttcacattttccctcacaaaatttccctcactaatttttg 7623676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 19545615 - 19545506
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  19545615 aaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgtttttcctcactaaattt 19545516  T
Q  327 ccctcactaa 336  Q
    ||||||||||    
T  19545515 ccctcactaa 19545506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 46942623 - 46942486
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| |||||||||||| ||||||| ||||||||||| || |||| |||||||| || |||||||||||||||||||||| ||||||||    
T  46942623 acactactagaaaaatcaaaattagggaaggaaattagtgacagaaaaaattaaatccctcacaattttcttggtcgcaaaatttagtgacagaattaga 46942524  T
Q  296 aagggatttcatgttttccctcactaaatttccctcac 333  Q
     |||||||||| |||||||||| ||||| |||||||||    
T  46942523 gagggatttcacgttttccctctctaaaattccctcac 46942486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 197 - 333
Target Start/End: Complemental strand, 31250223 - 31250087
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||| ||||||||||||||| | ||| ||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||||     
T  31250223 cactactagaaaatgcaaaattagggaggaagattagtgacggaaaaaataaaattccttacaaatttcttggtcgcaaaatttagtgacagaattagag 31250124  T
Q  297 agggatttcatgttttccctcactaaatttccctcac 333  Q
    ||||||||  ||||||||||| |||||||||||||||    
T  31250123 agggattttgtgttttccctctctaaatttccctcac 31250087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 1745498 - 1745612
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  1745498 aaaagcaaaattagcgagggaaattagtgacggaaaa-atgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagagatttta 1745596  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  1745597 cgttttccctcactaa 1745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 11219273 - 11219134
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || ||||| |||||||||||| | ||||||||||||| |||||||||||||     
T  11219273 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatagtcgcaaaatttaatgacggaattagag 11219174  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||||| |||||||||||| |||||| |||||||||    
T  11219173 agggatttcacgttttccctcacaaaattttcctcactaa 11219134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 197 - 332
Target Start/End: Original strand, 11837214 - 11837349
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||  ||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||     
T  11837214 cactactagaaaaaacaaaattagcgagggaaattcgtgatggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagag 11837313  T
Q  297 agggatttcatgttttccctcactaaatttccctca 332  Q
    ||| |||||||||||||||||||||| | |||||||    
T  11837314 aggaatttcatgttttccctcactaagtatccctca 11837349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 196 - 334
Target Start/End: Original strand, 27182657 - 27182793
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| |||||||| |||||||||||||||||||| |||||| ||||  |||||| |||||||||| |||||||| ||| ||||||||||| |||||||    
T  27182657 acactactaggaaaaacaaaattagggagggaaattagtgacaaaaaa--taaaatccctcacaaatcccttggtcacaagatttagtgacgaaattaga 27182754  T
Q  296 aagggatttcatgttttccctcactaaatttccctcact 334  Q
     || |||||| ||||||||||||||||||||| ||||||    
T  27182755 gagagatttcttgttttccctcactaaatttctctcact 27182793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 29704042 - 29704177
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||   || |||||||||||||||||||||||| | ||||||||||    
T  29704042 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttatgatcgcaaaatttagtgacggaattaaagagggatttca 29704141  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||| ||||| |||||||||||||||| |||||    
T  29704142 cgttttctctcacaaaatttccctcactaatttttg 29704177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 31433862 - 31433727
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| ||||||||  ||||||||| |||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  31433862 aaaagtaaaattagatagggaaattagtgatagaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacggaattagagaggaatttca 31433763  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||  ||||| |||||||||||| |||||    
T  31433762 cgttttccctttctaaaattccctcactaatttttg 31433727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 5565858 - 5565732
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||| ||||||||||||| ||||| ||||| |||||||  |||||||||| ||||||||||||||||||||||  |||||||    
T  5565858 acactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttcttggtcgcaaaatttagtgacataattaga 5565759  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     |||||||||| |||||||||||||||    
T  5565758 gagggatttcacgttttccctcactaa 5565732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 23773612 - 23773487
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| |||||||||  ||||||||| ||||| ||| | || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  23773612 cactactagaaaaaacaaaattagtaagggaaattagtgacggaagaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 23773513  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| | |||||||||||||||    
T  23773512 agggattttacgttttccctcactaa 23773487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 36564439 - 36564584
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||||||||||| ||||| ||||  ||||| ||||||| ||| ||| |||| ||||||||| |||||||||||| |||||||     
T  36564439 cactactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaatccctgacagattctttggtcgcagaatttagtgacgaaattagag 36564538  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||    
T  36564539 agggatttcatgctttccctcacaaaatttccctcactaatttttg 36564584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 43329763 - 43329888
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||     
T  43329763 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagag 43329862  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    | |||||| |  ||||||||||||||    
T  43329863 aaggattttacattttccctcactaa 43329888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 46012728 - 46012853
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||| ||||||| ||||| ||||| ||||| |||||||  ||||||||||||||| |||||||||||||||||  |||||||     
T  46012728 cactactagaaaaagcaaaatcagggaggaaaattagtgacggaaaaaataaaatctctcacaaattccttgatcgcaaaatttagtgacaaaattagag 46012827  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    ||||||||||||||||||||||||||    
T  46012828 agggatttcatgttttccctcactaa 46012853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 8543603 - 8543460
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| |||| ||||||||| |||||||||| ||||  ||||| || |||||||| |||| || | ||||||||||||||| |||||||||||||     
T  8543603 cactattagaaaaaacaaaattagcgagggaaattagtgatggaaaa-atgaaattcctaacaagtttcatggtcgcaaaatttaatgacggaattagag 8543505  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||    
T  8543504 agggatttcacgttttccctcacaaaatttccctcactaattttt 8543460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 198 - 342
Target Start/End: Complemental strand, 27969049 - 27968905
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| ||||||||||| ||||||||||||| ||||| ||| | |||||||  ||||||  ||  |||||||||||||||| |||| |||||||| |    
T  27969049 actactagaaaaagcaaaatcagggagggaaattagtgacggaacaaataaaatctctcacacctttgttggtcgcaaaatttaatgacagaattagaga 27968950  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||    
T  27968949 gggatttcatgttttccctcactaaatttccgtcactaatttttg 27968905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 23217218 - 23217353
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||||||||||||||  |||  ||||| || |||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||    
T  23217218 aaaagaaaaattagggagggaaattaatgagggaaaaaatcaaattcctcacaaattctatggtcccaaaatttagtgacggaattagagagggatttca 23217317  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| |||||||| |||||| || |||||    
T  23217318 cgttttccctctctaaattttcctcaccaatttttg 23217353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 11085341 - 11085487
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| ||| |||||  || || ||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  11085341 acactactagaaaaagtaaaattagcgagagaaatcagtaacggaaaaaatgaaattcctcataaattctttggtcgcaaaatttagtgacggaattaga 11085440  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||||   |||||||||||||||||| |||||||| |||||    
T  11085441 gagggatttcacaatttccctcactaaatttctctcactaatttttg 11085487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 196 - 336
Target Start/End: Complemental strand, 10803857 - 10803716
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    |||||| ||| |||||| ||||||||||||||||||  |||| ||||| | | |||||||||||||||| ||||||||||||||||| |||||||||||     
T  10803857 acactactagaaaaagccaaattagggagggaaattaatgacggaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttaatgacggaattaa 10803758  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaa 336  Q
    | ||| |||| | |||||||||||||||||||||||| ||||    
T  10803757 agaggaattttacgttttccctcactaaatttccctcgctaa 10803716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 28859710 - 28859597
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    |||||||| |||| ||||| ||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| | |||||    
T  28859710 aaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggttgcaaaatttagtgacggaattagagagggattttacgtttt 28859611  T
Q  313 ccctcactaaattt 326  Q
     |||||||||||||    
T  28859610 acctcactaaattt 28859597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 47263265 - 47263394
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||  || ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| || |||||     
T  47263265 cactactagaaaaagcaaaattaacgaaggaaattggtgacagaaaaaattaaattcctcacaaattccttggtcgcaaaatttagtgacagagttagat 47263364  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    ||  |||| | |||||||||||||||||||    
T  47263365 agaaattttacgttttccctcactaaattt 47263394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 27212811 - 27212926
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| |||| |||||| ||||||| |||||||||||| || ||||||||||||||||||||||||| | |||||||||| ||||| |||| ||||||||    
T  27212811 aaattagtgatagaaaaaataaaatccctcacaaattctttagtcgcaaaatttagtgacggaattaaagagggatttcacgtttttcctctctaaattt 27212910  T
Q  327 ccctcactaacttttg 342  Q
    |||||||||| |||||    
T  27212911 ccctcactaatttttg 27212926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 8546370 - 8546265
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||| ||||| ||||| ||||| || |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  8546370 aaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatgatcgcaaaatttagtgacggaattagagagggatttca 8546271  T
Q  307 tgtttt 312  Q
     |||||    
T  8546270 cgtttt 8546265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 17269604 - 17269729
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| || |||||||   ||  ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||     
T  17269604 cactactagaaaaagcaaaattagcgatggaaattaacgatggaaaaaataaaattcctcacaaattctttgatcgcaaaatttagtgacggaattagag 17269703  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    ||||||||||| |||| |||||||||    
T  17269704 agggatttcatatttttcctcactaa 17269729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 18380159 - 18380014
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||  ||||| ||||| || |||||| ||||||||| |||| ||| |||||||||||||||||||| |     
T  18380159 cactactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaatgaaattcttcacaaatttcttgatcgtaaaatttagtgacggaattaaag 18380060  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| |  |||||||||| ||||||||||||||||| |||||    
T  18380059 agggattttacattttccctcattaaatttccctcactaatttttg 18380014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 6718815 - 6718723
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcac 319  Q
    ||||| ||||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6718815 aaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagaaagggatttcacgttttccctcac 6718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 21490034 - 21490159
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||   |||| ||||| || ||||| ||||||||||||||||||||||||||||||||| ||||||||     
T  21490034 cactactagaaaaaacaaaattagtgagggaaatcaatgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacagaattagag 21490133  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| |  ||||||||||||||    
T  21490134 agggattttacattttccctcactaa 21490159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 20761950 - 20762045
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 292  Q
    ||||| ||| ||||||||||| ||||||||||||| ||||| ||||| |||||||  ||||||||||||||||||||||||||||||||| |||||    
T  20761950 cactactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggtcgcaaaatttagtgacagaatt 20762045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 6447245 - 6447391
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||||||||||| ||||  ||||| |||||||||||| || |||| |||||| |||| ||||||||| ||||||||    
T  6447245 acactactaggaaaagcaaaattagggagggaaattagtgatggaaaaaataaaattcctcgcagattctttggtctcaaagtttagtgacagaattaga 6447344  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||  |||||  | ||||  |||| |||||||| ||| |||| |||||    
T  6447345 aaaagatttactattttaactcattaaatttctctcgctaatttttg 6447391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 15490159 - 15490026
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||||| ||||||  ||||| |||||  |||| |||||||  ||||||||||  |||||||||||||||||||||  ||||| | ||||||||||    
T  15490159 aaaagcaaaatcagggagaaaaattagtgacgaaaaaaataaaatctctcacaaattttttggtcgcaaaatttagtgac-aaattaaagagggatttca 15490061  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     |||||| |||||||||||||||||||||| ||||    
T  15490060 cgttttctctcactaaatttccctcactaattttt 15490026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 6088228 - 6088353
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||| ||  ||||||||| ||||| ||||| || |||||||||| ||||||||||||| ||||||||| | |||||||||||     
T  6088228 cactactagaaaaagcaaaataagtaagggaaattagtgacggaaaaaatgaaattcctcagaaattccttggtcacaaaatttaataacggaattagag 6088327  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    | |||||| | |||||||||||||||    
T  6088328 atggattttacgttttccctcactaa 6088353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 196 - 334
Target Start/End: Complemental strand, 20088541 - 20088398
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacaga-----aaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaa 290  Q
    |||||| ||| ||||| |||||||| |||||||||| | |||| |     ||| |||||||| |||| |||||| |||||| ||||||||||||| ||||    
T  20088541 acactactagaaaaagtaaaattagagagggaaattagcgacatatataaaaaaataaaatttctcataaattctttggtcacaaaatttagtgatggaa 20088442  T
Q  291 ttagaaagggatttcatgttttccctcactaaatttccctcact 334  Q
    ||||| | |||||||||||||| |||||||||||||| ||||||    
T  20088441 ttagagaaggatttcatgttttgcctcactaaatttctctcact 20088398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 29451219 - 29451084
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||| ||||||||  |||||||||| ||||| ||||| || ||||| |||| ||||||||  || ||||||||| | |||||||||||| |||||||| |    
T  29451219 aaaaacaaaattaacgagggaaattagtgacggaaaaaatgaaatttctcataaattcctcagttgcaaaattttgggacggaattagagagggatttta 29451120  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||| ||| |||| |||||    
T  29451119 cgttttccctcactaaatttctctcgctaatttttg 29451084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 10772053 - 10772183
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||| ||| ||||| |||||||  |||||||||| ||||||||||| | |  ||||| |||||||||  || ||||||||||||| ||||| |||||||    
T  10772053 cactactagaaaaagtaaaattaacgagggaaattagtgacagaaaaaaatggaattcttcacaaattttttagtcgcaaaatttaatgacgaaattaga 10772152  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     ||||||||||| ||||||||||||||||||    
T  10772153 gagggatttcatattttccctcactaaattt 10772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 20615344 - 20615488
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| ||||| ||||||| ||||| ||||| | ||| ||||| |||||||  ||||||||||  ||||||| |||||||| |||| ||||||||    
T  20615344 acactattag-aaaag-aaaattaaggaggaaaattagagacggaaaaaataaaatatctcacaaattttttggtcgtaaaatttaatgacagaattaga 20615441  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||| |||||| ||||||| || |||||||||||||||||| |||||    
T  20615442 gaggaatttcacgttttccttctctaaatttccctcactaatttttg 20615488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 50240851 - 50240756
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||| ||||| |||||||  |||| ||||||||||| ||||||||||||| ||  ||||||| || ||||||||||| |||||||||||    
T  50240851 aaattagtgacggaaaaaataaaatctctcataaattccttggacgcaaaatttagtaacataattagagagagatttcatgttatccctcactaa 50240756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 23233214 - 23233288
Alignment:
Q  248 aaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||||||| | |||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||    
T  23233214 aaatttctcacaaatactttggtcgcaaaatttagtgaaggaatttgagaggaatttcacgttttccctcactaa 23233288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 332
Target Start/End: Original strand, 26963259 - 26963384
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||| ||||||||  |||||||||| |||||  |||| || |||||  | |||||| | ||||| | |||||||||| ||||||||||| ||| |||| |    
T  26963259 aaaaacaaaattaacgagggaaattagtgacgtaaaaaatgaaattttttacaaatactttggttgtaaaatttagtaacggaattagagaggaatttta 26963358  T
Q  307 tgttttccctcactaaatttccctca 332  Q
      ||||||||||||||||||||||||    
T  26963359 cattttccctcactaaatttccctca 26963384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 13615551 - 13615433
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| ||||||||||||||| | | ||| | ||||| ||| | ||||||  ||||||||||| |||   ||||||||||||||| | |||||||    
T  13615551 acactattagaaaaagcaaaattaggaaagaaaaatagtgacggaagaaataaaacccctcacaaatttcttaaccgcaaaatttagtgatgaaattaga 13615452  T
Q  296 aagggatttcatgttttcc 314  Q
     ||| |||||| |||||||    
T  13615451 gaggaatttcacgttttcc 13615433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 326
Target Start/End: Complemental strand, 45304458 - 45304340
Alignment:
Q  208 aaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcat 307  Q
    |||||||||| | |||| ||||||  |||| ||||| ||||||||||| |||| ||| || ||  ||||||||| ||||||||||  ||||  |||||||    
T  45304458 aaagcaaaatcaaggagagaaattaatgacggaaaaaataaaattcctaacaatttctttagttacaaaatttaatgacggaatttaaaagaaatttcat 45304359  T
Q  308 gttttccctcactaaattt 326  Q
     |||| |||||||||||||    
T  45304358 atttttcctcactaaattt 45304340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 35579605 - 35579654
Alignment:
Q  277 atttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  35579605 atttagtgacggaattagagagggattttacgttttccctcactaaattt 35579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 27711237 - 27711285
Alignment:
Q  266 ttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttcc 314  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  27711237 ttggtcgcaaaatttagtgacggaattagagagaaatttcatgttttcc 27711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 23233183 - 23233219
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaattt 232  Q
    |||||||||| ||||||||||||||||||||||||||    
T  23233183 acactattagaaaaagcaaaattagggagggaaattt 23233219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 3564923 - 3564856
Alignment:
Q  369 tttagaccaattgcaatggccaattttaaattcaaaaccatctccaagatcatagcagacatgttagc 436  Q
    ||||||||||||||||||||||| || |||||||||  ||| || |||||||| || |||| ||||||    
T  3564923 tttagaccaattgcaatggccaacttcaaattcaaagtcatttcaaagatcattgctgacaggttagc 3564856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 4e-62; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 30783473 - 30783328
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  30783473 cactactaggaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcacaaattcattggtcgcaaaatttagtgacggaattagag 30783374  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  30783373 agggatttcatgttttccctcactaaatttccctcactaatttttg 30783328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 41637753 - 41637608
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41637753 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 41637654  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||    
T  41637653 agggatttcatgttttccctcactaaattttcctcactaatttttg 41637608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 31266489 - 31266344
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||| |||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31266489 cactactaggaaaagtaaaattagggagggaaattttttacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 31266390  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||    
T  31266389 agggatttcatgttttccctcgctaaatttccctcactaatttttg 31266344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 27327752 - 27327606
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |    
T  27327752 acactactaggaaaagcaaaattagggatggaaatttgtgacggaaaacataaaattcctcacaaattccttagacgcaaaatttagtgacggaattaaa 27327653  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||||||||| ||| |||||    
T  27327652 gagggatttcatgttttccctcactaaatttccctcattaatttttg 27327606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 29749403 - 29749548
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||      
T  29749403 cactactagaaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaggg 29749502  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||    
T  29749503 agggatttcatgttttccctcactaaattttcctcactaatttttg 29749548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 28841341 - 28841487
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| |||||||||||||||||| |||||||||| || || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28841341 acactactaggaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 28841440  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||||||||||||| |||||||| ||||||||||| |||||    
T  28841441 gagggatttcatgttttcccacactaaatatccctcactaatttttg 28841487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 32300576 - 32300441
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  32300576 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 32300477  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  32300476 cgttttccctcacaaaatttccctcactaatttttg 32300441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 198 - 331
Target Start/End: Original strand, 28319580 - 28319713
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  28319580 actactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaga 28319679  T
Q  298 gggatttcatgttttccctcactaaatttccctc 331  Q
    ||||||||| |||||||||||| |||||||||||    
T  28319680 gggatttcacgttttccctcacaaaatttccctc 28319713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 1141661 - 1141526
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | |||||||||||||||||||| |||||||| ||||||||||    
T  1141661 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaattagagagggatttca 1141562  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  1141561 cgttttccctcacaaaatttccctcactaatttttg 1141526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 15636745 - 15636880
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||    
T  15636745 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgaaattagagagggatttca 15636844  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  15636845 cgttttccctcacaaaatttccctcactaatttttg 15636880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 18551263 - 18551398
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||| ||||| ||||| ||||| || ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |    
T  18551263 aaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttagtgacggaattagagagggatttta 18551362  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||| ||||||||||| |||||    
T  18551363 tgttttccctcactaaatatccctcactaatttttg 18551398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 13788054 - 13788200
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||  ||||| ||||| || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13788054 acactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaattaga 13788153  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||| |  |||||||||||||||||| ||||||||| |||||    
T  13788154 gagggattttacattttccctcactaaattttcctcactaatttttg 13788200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 195 - 336
Target Start/End: Complemental strand, 32009090 - 32008948
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 293  Q
    ||||||| ||| |||||||||||||| |||| ||||| ||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  32009090 cacactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 32008991  T
Q  294 gaaagggatttcatgttttccctcactaaatttccctcactaa 336  Q
    || |||||||| | ||||||||||| |||||||||||||||||    
T  32008990 gagagggattttacgttttccctcattaaatttccctcactaa 32008948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 20065074 - 20065219
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | |||||||||||||||||||| ||||||||     
T  20065074 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgactgaattagag 20065173  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| ||||| |||||| |||||||||||||||| |||||    
T  20065174 agggatttcacgtttttcctcacaaaatttccctcactaatttttg 20065219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 22140364 - 22140509
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||  |||||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||     
T  22140364 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagag 22140463  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| ||||||  |||| |||||||||||||||| |||||    
T  22140464 agggatttcacgttttctttcacaaaatttccctcactaatttttg 22140509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 41736307 - 41736162
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||     
T  41736307 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacgaaattagag 41736208  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| |  |||||||||||||||||| ||||||||| |||||    
T  41736207 agggattttacattttccctcactaaattttcctcactaatttttg 41736162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 198 - 341
Target Start/End: Original strand, 23388379 - 23388522
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||| ||||||||| |||||||||| ||||| ||||| || |||||| ||||||||| | ||||||||||||||||||||||||||||| |    
T  23388379 actactagaaaaaacaaaattagcgagggaaattggtgacggaaaaaatgaaattcttcacaaatttcatggtcgcaaaatttagtgacggaattagaga 23388478  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||    
T  23388479 gggatttcacgttttccctcacaaaatttccctcactaattttt 23388522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 14757120 - 14757266
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| || | |||||  |||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  14757120 acactactagaaaaagcaaaattagcgaagaaaattaatgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 14757219  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     || ||||||||||||||||||||||||| || |||||||| |||||    
T  14757220 gagagatttcatgttttccctcactaaatatcactcactaatttttg 14757266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 43408510 - 43408636
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  43408510 acactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 43408609  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     |||||||| | |||||||||||||||    
T  43408610 gagggattttacgttttccctcactaa 43408636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 204 - 342
Target Start/End: Original strand, 44366004 - 44366142
Alignment:
Q  204 aggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatt 303  Q
    ||||||| ||||||||| ||||||||||  |||||||||| |||||||||||||||||||| |||||| ||||||| | ||| ||||||||| |||||||    
T  44366004 aggaaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcacaaattcgttggtcacaaaattcaatgagggaattagagagggatt 44366103  T
Q  304 tcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||| |||||||||| |||||||||||| |||||    
T  44366104 tcatgtttttcctcactaaacttccctcactaatttttg 44366142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 21293711 - 21293856
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || ||||| |||||||||||| |||||| ||||||||||||||||||||||     
T  21293711 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgtaaaatttagtgacggaattagag 21293810  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||||| |||||||||||| |||||||||||||||| |||||    
T  21293811 agagatttcacgttttccctcacaaaatttccctcactaatttttg 21293856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 32185967 - 32185822
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || ||||||||| |||||| | |||||| ||||||||||||||||||||||     
T  32185967 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcgcaaatttcatggtcgtaaaatttagtgacggaattagag 32185868  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  32185867 agggatttcacgttttccctcacaaaatttccctcactaatttttg 32185822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 208 - 342
Target Start/End: Original strand, 26687701 - 26687836
Alignment:
Q  208 aaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||| |||||||||||  |||| ||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  26687701 aaagcaaaattaaggagggaaattaatgacggaaaaaaataaaatttctcacaaattccttggttgcaaaatttagtgacggaattagagatggatttca 26687800  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| |||||||||||| |||||||| |||||    
T  26687801 tgttttccgtcactaaatttcgctcactaatttttg 26687836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 207 - 341
Target Start/End: Original strand, 37724002 - 37724136
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| ||||| || |||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||    
T  37724002 aaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggtattagcgagggatttca 37724101  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||||||||||||| |||||||| ||||    
T  37724102 cgttttccctcactaaatttctctcactaattttt 37724136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 196 - 334
Target Start/End: Complemental strand, 44723068 - 44722930
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| ||||||||||  |||  ||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||    
T  44723068 acactactagaaaaagcaaaattagcgagggaaattaatgatggaaaaaatgaaattccttacaaattccttagtcgcaaaatttagtgacggaattaga 44722969  T
Q  296 aagggatttcatgttttccctcactaaatttccctcact 334  Q
     ||||||||||| ||||| |||||||||| |||||||||    
T  44722968 gagggatttcatattttctctcactaaatatccctcact 44722930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 8430431 - 8430286
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| | |||||||| ||||| ||||| |||||||||||||||||||   || ||| ||||||||||||||||||||||     
T  8430431 cactactagaaaaaacaaaattagcgggggaaattagtgacggaaaaaataaaattcctcacaaattttatgatcgtaaaatttagtgacggaattagag 8430332  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  8430331 agggatttcacgttttccctcacaaaatttccctcactaatttttg 8430286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 12779735 - 12779606
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||||||||||| |||||||     
T  12779735 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacgaaattagag 12779636  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    ||| |||| | |||||||||||||||||||    
T  12779635 aggaattttacgttttccctcactaaattt 12779606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 37552362 - 37552233
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||||| |||||||||||||     
T  37552362 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaattagag 37552263  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| |  ||||||||||||||||||    
T  37552262 agggattttacattttccctcactaaattt 37552233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 206 - 342
Target Start/End: Original strand, 18916410 - 18916545
Alignment:
Q  206 gaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttc 305  Q
    |||||||||||||||| |||||||||  |||| ||||| ||||||| |||||||||||  ||| ||||||||||||||||| |||||||| |||||||||    
T  18916410 gaaaagcaaaattaggcagggaaattactgacggaaaa-ataaaatccctcacaaattttttgatcgcaaaatttagtgactgaattagagagggatttc 18916508  T
Q  306 atgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||| ||||||||| |||||||| |||||    
T  18916509 atgttttccctccctaaatttctctcactaatttttg 18916545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 28262489 - 28262355
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| ||||||||  ||||||||| ||||  ||||| || |||||||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||    
T  28262489 aaaagtaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaattagagagggatttca 28262390  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||||| |||||||||||||||| ||||    
T  28262389 cgttttccctcacaaaatttccctcactaattttt 28262355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 23857958 - 23858086
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| | ||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  23857958 cactactagaaaaagcaaaattagcgagggaaattagtgacgggaaa-atgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 23858056  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |  ||||| | |||||||||||||||||||    
T  23858057 aatgattttacgttttccctcactaaattt 23858086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 44476375 - 44476500
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||     
T  44476375 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcacaaattccttggtcgcaaaatttagtgacggaattagag 44476474  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    || ||||| | ||||||| |||||||    
T  44476475 agagattttacgttttccttcactaa 44476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 13613103 - 13613226
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||| ||||| |||||  |||| || ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  13613103 aaaagaaaaattagcgaggaaaattagtgacgaaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttta 13613202  T
Q  307 tgttttccctcactaaatttccct 330  Q
     |||||||||||||||| ||||||    
T  13613203 cgttttccctcactaaacttccct 13613226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 27523084 - 27523001
Alignment:
Q  259 aaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  27523084 aaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaatttttg 27523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 7093703 - 7093578
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||  |||||||||||||||||||||  |||||||     
T  7093703 cactactagtaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacaaaattagag 7093604  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| | |||||||||||||||    
T  7093603 agggattttacgttttccctcactaa 7093578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 196 - 336
Target Start/End: Complemental strand, 18609650 - 18609510
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||||||||| |||| || ||||| ||||| ||||| || || ||| ||| |||||||||||||||| ||||||||||| || | | |||||||    
T  18609650 acactattaggaaaagtaaaaataaggaggaaaattagtgacggagaaaatagaatccctcacaaattccttgatcgcaaaattttgtcatgaaattaga 18609551  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     ||| ||||||||||||||||||||||||||||| ||||||    
T  18609550 gaggtatttcatgttttccctcactaaatttcccccactaa 18609510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 195 - 322
Target Start/End: Original strand, 26243319 - 26243446
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||||||  |||||||||| ||| | | ||| |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  26243319 cacactactagaaaaagcaaaattaacgagggaaattagtggcggtaaaaataaaattcctcacaaattcattggtcgtaaaatttagtgacggaattag 26243418  T
Q  295 aaagggatttcatgttttccctcactaa 322  Q
    | ||| |||| | ||||| |||||||||    
T  26243419 agaggaattttacgtttttcctcactaa 26243446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 27039908 - 27040003
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 292  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  27039908 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 27040003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 37802379 - 37802517
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| |||||||||||||||||||||| ||||||  |||| ||||| |||||||  ||| ||| ||  ||||||||||||||||||||||||||||||     
T  37802379 cactactaggaaaagcaaaattagggagagaaattgatgacggaaaaaataaaatctctcgcaatttt-ttggtcgcaaaatttagtgacggaattagag 37802477  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |  ||||| | |||||||||| ||||||||||||||||||    
T  37802478 actgattttacgttttccctctctaaatttccctcactaa 37802517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 40018937 - 40018792
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||   ||||||||| ||||| ||||| |||||||| || |||||||| ||||| |||||||| |||||  ||||||||     
T  40018937 cactactagaaaaaacaaaattaaaaagggaaattagtgacggaaaaaataaaatttcttacaaattcgttggttgcaaaattcagtgagagaattagag 40018838  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||||||||||||||||||||||||| | ||||||| |||||    
T  40018837 agagatttcatgttttccctcactaaattttcgtcactaatttttg 40018792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 195 - 342
Target Start/End: Complemental strand, 36374035 - 36373890
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| |||||||| |||||||||||||  || || | ||| ||||| ||||||| |||| ||||||||||| ||| ||||||||||||| |||||||    
T  36374035 cacactactaggaaaaacaaaattagggagtaaatttagcgacggaaaaaataaaatccctctcaaattccttgatcgtaaaatttagtgactgaattag 36373936  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
      ||| ||||||  |||||||||||||||||| ||||||||| |||||    
T  36373935 --aggaatttcacattttccctcactaaattttcctcactaatttttg 36373890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 36550971 - 36550844
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| ||||||||| |||||||||| ||||  ||||| ||||| | |||||||| ||  |||||||||||||||||||| ||||||| |    
T  36550971 acactactagaaaaaacaaaattagagagggaaattagtgatggaaaaaataaa-tccctcacaagttatttggtcgcaaaatttagtgatggaattata 36550873  T
Q  296 aagggatttcatgttttccctcactaaat 324  Q
     ||||||||||||||||||||||||||||    
T  36550872 gagggatttcatgttttccctcactaaat 36550844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 35697582 - 35697475
Alignment:
Q  205 ggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggattt 304  Q
    |||||||  |||||||||||||||||| || || ||||| |||||||  ||||||||||  |||||||||||||||||||||||||||||| ||| ||||    
T  35697582 ggaaaagtgaaattagggagggaaattagtaacggaaaaaataaaatctctcacaaattttttggtcgcaaaatttagtgacggaattagagaggaattt 35697483  T
Q  305 catgtttt 312  Q
    ||||||||    
T  35697482 catgtttt 35697475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 38362281 - 38362396
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||||||||  ||||||||| ||||| ||||| || ||||||||||||||||| ||||||| |||||| |||||| |||||||||| |||||| |    
T  38362281 aaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgtaaaattaagtgacagaattagaaaaggatttta 38362380  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||| ||||    
T  38362381 cgttttccctcgctaa 38362396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 2556220 - 2556085
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||| ||||| ||||  ||||| |||||||| |||||||||| |||||| | |||||||||||||||||||||| |   ||||||    
T  2556220 aaaagtaaaattagagaggaaaattagtgatggaaaaaataaaatttctcacaaatttcttggttgtaaaatttagtgacggaattagagaaaaatttca 2556121  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
      ||||||||| ||||| |||||||||||| |||||    
T  2556120 cattttccctctctaaaattccctcactaatttttg 2556085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 203 - 326
Target Start/End: Complemental strand, 8763763 - 8763640
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||| ||||||||||||||||  || || ||||| ||||| |||||||  | ||||||||||||| ||  |||||||| ||||||||||||| | ||||    
T  8763763 taggacaagcaaaattagggagaaaagttagtgacggaaaaaataaaatctcgcacaaattccttgatcataaaatttaatgacggaattagagatggat 8763664  T
Q  303 ttcatgttttccctcactaaattt 326  Q
    |||||||||||| |||||||||||    
T  8763663 ttcatgttttccttcactaaattt 8763640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 341
Target Start/End: Original strand, 13134646 - 13134764
Alignment:
Q  223 agggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||||||| ||||| ||||| ||||||| |||||||| ||  || |||| |||||||| ||||  |||||||||||||||||| ||||||| || ||||    
T  13134646 agggaaattagtgacggaaaaaataaaatccctcacaatttttttagtcgtaaaatttattgacaaaattagaaagggatttcaagttttccatctctaa 13134745  T
Q  323 atttccctcactaactttt 341  Q
    ||||  |||||||| ||||    
T  13134746 atttttctcactaattttt 13134764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 9004359 - 9004453
Alignment:
Q  248 aaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||| |||| ||||||||| ||  ||||||||||||| ||||||||| ||  |||| |  |||||||||||||||||||||||||||| |||||    
T  9004359 aaatttctcataaattccttagttacaaaatttagtgatggaattagagagaaattttacattttccctcactaaatttccctcactaatttttg 9004453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 29998633 - 29998703
Alignment:
Q  271 cgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    ||||||||||||||||||||||||| | |||||||| ||||||| || ||||| |||||||||||| ||||    
T  29998633 cgcaaaatttagtgacggaattagagaaggatttcacgttttccttctctaaaattccctcactaattttt 29998703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 22192314 - 22192182
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||| |||||| |||||| ||||| ||||| |||||||  ||||||||||  |||||| |||             |||||||     
T  22192314 cactactagaaaaagcaaaatcagggagagaaattagtgacggaaaaaataaaatctctcacaaatttattggtcacaa-------------aattagag 22192228  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||    
T  22192227 agggatttcatgttttccctcactaaatttccgtcactaatttttg 22192182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 31966555 - 31966647
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcact 320  Q
    ||||| ||||| ||||| ||||||| ||| | ||||||||||||||||||||||||| ||  ||||||| || ||||||||||| |||||||||    
T  31966555 aaattagtgacggaaaaaataaaatccct-ataaattccttggtcgcaaaatttagtaacataattagagagagatttcatgttatccctcact 31966647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 214 - 341
Target Start/End: Complemental strand, 9590588 - 9590461
Alignment:
Q  214 aaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttc 313  Q
    |||||||||||||||||| ||||| ||||| || ||||   | | ||||| |||  |||||||||||||| ||  ||||||| || ||||||| |||||     
T  9590588 aaattagggagggaaattagtgacggaaaaaatgaaatcttttaaaaattacttcatcgcaaaatttagtaacaaaattagagagcgatttcacgttttt 9590489  T
Q  314 cctcactaaatttccctcactaactttt 341  Q
     ||| |||||||||||||||||| ||||    
T  9590488 gctcgctaaatttccctcactaattttt 9590461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 16098917 - 16098999
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatt 279  Q
    ||||| ||| |||| |||||||||||||||||||| || |||||||| || ||||  ||||||| ||||||||| ||||||||    
T  16098917 cactactagaaaaatcaaaattagggagggaaattagtaacagaaaaaattaaatctctcacaatttccttggttgcaaaatt 16098999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 27058407 - 27058461
Alignment:
Q  288 gaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||||| |||||    
T  27058407 gaattagagagggattttacgttttccctcactaaatttccctcactaatttttg 27058461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 245 - 336
Target Start/End: Complemental strand, 13436776 - 13436685
Alignment:
Q  245 ataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| |||||||||| |||  ||| |||||||| ||||| ||||||  | ||| ||||||||||| |||| |||||||| ||||||||    
T  13436776 ataaaatttctcacaaatttcttaatcgtaaaatttaatgacgaaattagtgaaggacttcatgttttctctcattaaatttctctcactaa 13436685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 121; Significance: 2e-61; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 58721 - 58577
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||     
T  58721 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaaaaatttcttggtcgcaaaatttagtgacggaattagag 58622  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  58621 agggatttcatgttttccctcactaaatttccctcactaattttt 58577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 119; Significance: 2e-60; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 74540 - 74686
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  74540 acactactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttggtcgcaaaatttagtgacggaattaga 74639  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||||||||||||| |||||    
T  74640 gagggatttcatgttttccctcactaaatttccctcactaatttttg 74686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 2e-60; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 50845329 - 50845475
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50845329 acactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 50845428  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||| || |||||| |||||    
T  50845429 gagggatttcatgttttccctcactaaattttccacactaatttttg 50845475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 13102455 - 13102310
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13102455 cactactaggaaaagcaaaattaaggagggaaatttgtgacggaaaacataaaattcatcacaaattccttggtcgcaaaatttagtgacggaattagaa 13102356  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||| ||||||||||||||||||||||||||||||| |||||    
T  13102355 agagattttatgttttccctcactaaatttccctcactaatttttg 13102310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 14761007 - 14760861
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  14761007 acactactagaaaaagcaaaattaaagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagt 14760908  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||||||||||||| |||||    
T  14760907 gagggatttcatgttttccctcactaaatttccctcactaatttttg 14760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 7830170 - 7830026
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| |||||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||      
T  7830170 cactactaggaaaagcaaaattagggagggaaatttatgatggaaaacataaaatttctcacaaattccttggtcgcaaaatttagtgacgaaattaggg 7830071  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  7830070 agggatttcatgttttccctcactaaatttccctcactaattttt 7830026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 12720948 - 12720804
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12720948 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 12720849  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||    
T  12720848 agggatttcatgttttccctcactaaatatccctcactaattttt 12720804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 194 - 342
Target Start/End: Complemental strand, 6459359 - 6459211
Alignment:
Q  194 acacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 293  Q
    |||||||| ||| |||||| ||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6459359 acacactactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 6459260  T
Q  294 gaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || |||||||||||||||||||||||||||| ||||||||||| |||||    
T  6459259 gagagggatttcatgttttccctcactaaatatccctcactaatttttg 6459211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 9109975 - 9110120
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||     
T  9109975 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagag 9110074  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  9110075 agggatttcatgttttccctcactaaatatccctcactaatttttg 9110120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 45839431 - 45839286
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||  |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  45839431 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 45839332  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  45839331 agggatttcatgttttccctcactaaatatccctcactaatttttg 45839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 41752572 - 41752427
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| || ||||||| ||||| ||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||     
T  41752572 cactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaatttttcacaaattccttggtcgcaaaatttagtgacggaattagag 41752473  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  41752472 agggatttcatgttttccctcactaaatatccctcactaatttttg 41752427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 6412052 - 6412198
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| || || ||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  6412052 acactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaaa 6412151  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||| ||||||||||| |||||    
T  6412152 gagggatttcatgttttccctcactaaatatccctcactaatttttg 6412198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 203 - 336
Target Start/End: Original strand, 16913583 - 16913716
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||| |||| |||||||| | ||||||||||| ||||||    
T  16913583 taggaaaagcaaaattaggaagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgtaaaatttaataacggaattagagagggat 16913682  T
Q  303 ttcatgttttccctcactaaatttccctcactaa 336  Q
    ||||||||||||||| ||||||||||||||||||    
T  16913683 ttcatgttttccctctctaaatttccctcactaa 16913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 22158931 - 22158796
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||||||||| ||||||||||| || |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  22158931 aaaagtaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 22158832  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  22158831 cgttttccctcacaaaatttccctcactaatttttg 22158796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 4340547 - 4340417
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| ||||||||||||||  ||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4340547 acactattagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 4340448  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     |||||||| | |||||||||||||||||||    
T  4340447 gagggattttacgttttccctcactaaattt 4340417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 15243225 - 15243079
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| ||||| || ||| |||||| ||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15243225 acactactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattaga 15243126  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| ||||||||||||||||||||||||||||| |||||    
T  15243125 tagggatttcacgttttccctcactaaatttccctcactaatttttg 15243079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 18894899 - 18895045
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| |||||||||||||||||| |||| ||||| |||||  |||| ||||||| ||||||| |||| |||||||||||||||||||||| |||||||    
T  18894899 acactactaggaaaagcaaaattagcgaggaaaattagtgacgaaaaaaataaaatacctcacatattctttggtcgcaaaatttagtgacgaaattaga 18894998  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||| ||||||||| |||||    
T  18894999 gagggatttcatgttttccctcactaaattttcctcactaatttttg 18895045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 20408160 - 20408305
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||| ||||| ||||| ||||| || |||||||||||||||||| ||||||||||||||||| |||||||||||     
T  20408160 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtaacggaattagag 20408259  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  20408260 agggatttcacgttttccctcacaaaatttccctcactaatttttg 20408305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 38531169 - 38531314
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| ||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  38531169 acactactagaaaaagtaaaattagggagggaaataagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgatggaattaga 38531268  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     || ||||||| |||||||||| |||||||||||||||||| ||||    
T  38531269 gagagatttcacgttttccctctctaaatttccctcactaattttt 38531314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 52183817 - 52183672
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||  ||||||||||  |||| ||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||     
T  52183817 cactactagaaaaagcaaaattaacgagggaaattaatgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagag 52183718  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  52183717 agggatttcacgttttccctcacaaaatttccctcactaatttttg 52183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 9464232 - 9464097
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| || ||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  9464232 aaaagtaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 9464133  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  9464132 cgttttccctcacaaaatttccctcactaatttttg 9464097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 17661189 - 17661044
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| |||||||||||||  || ||||||| ||||| ||||| ||||||||||||||||||| | ||||||||||||||||||| |||||||||     
T  17661189 cactattagaaaaagcaaaattaacgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgatggaattagag 17661090  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| |||||| |||||||||||| |||||||||||||||| |||||    
T  17661089 aggaatttcacgttttccctcacaaaatttccctcactaatttttg 17661044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 213 - 342
Target Start/End: Original strand, 22789607 - 22789736
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    ||||||||||||| ||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| || ||||||| |||||    
T  22789607 aaaattagggaggaaaattagtgacggaaaacataaaatttctcacaaattccatggtcgcaaaatttagtgactgaattagatagagatttcacgtttt 22789706  T
Q  313 ccctcactaaatttccctcactaacttttg 342  Q
    ||||| |||||||||||||||||| |||||    
T  22789707 ccctctctaaatttccctcactaatttttg 22789736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 46339444 - 46339580
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||| ||||| ||||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  46339444 acactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattaga 46339543  T
Q  296 aagggatttcatgttttccctcactaaatttccctca 332  Q
     || ||||||||||||||||| ||||||| |||||||    
T  46339544 gagagatttcatgttttcccttactaaatatccctca 46339580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 19865384 - 19865258
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| |||| ||||| ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19865384 acactactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattaga 19865285  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||||||||||||||||||||||||||    
T  19865284 gagggatttcatgttttccctcactaa 19865258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 23458037 - 23457891
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| |||| |||||  |||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||    
T  23458037 acactactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattaga 23457938  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| |||||||||||| |||||||||||||||| |||||    
T  23457937 gagggatttcacgttttccctcacaaaatttccctcactaatttttg 23457891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 28229454 - 28229580
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||    
T  28229454 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattaga 28229553  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     |||||||| | |||||||||||||||    
T  28229554 gagggattttacgttttccctcactaa 28229580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 41120736 - 41120866
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||  ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  41120736 acactaatagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 41120835  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     |||||||| | |||||||||||||||||||    
T  41120836 gagggattttacgttttccctcactaaattt 41120866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 46790140 - 46790014
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  46790140 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaattaga 46790041  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
    ||||||||| | |||||||||||||||    
T  46790040 aagggattttacgttttccctcactaa 46790014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 12161953 - 12161808
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||| |||||  |||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||     
T  12161953 cactactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagag 12161854  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||    
T  12161853 agggatttcacgttttccctcacaaaatttccctcactaatttttg 12161808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 22603687 - 22603542
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||  ||||||||| ||||  ||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||     
T  22603687 cactactagaaaaagcaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaattctttgatcgcaaaatttagtgacggaattagag 22603588  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||| | ||||||||||||||||||||||||||||| |||||    
T  22603587 agcgattttacgttttccctcactaaatttccctcactaatttttg 22603542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 222 - 342
Target Start/End: Original strand, 41071860 - 41071980
Alignment:
Q  222 gagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcacta 321  Q
    |||||||||| ||||| || || || ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  41071860 gagggaaattagtgacggagaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcacta 41071959  T
Q  322 aatttccctcactaacttttg 342  Q
    ||||||||||||||| |||||    
T  41071960 aatttccctcactaatttttg 41071980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 48522657 - 48522513
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||| ||||| ||||||||||| |||||||| ||||||||||  |||||||||||||||||||||||||||  |     
T  48522657 cactactagaaaaagcaaaattagcgaggaaaattagtgacagaaaaaataaaatttctcacaaattttttggtcgcaaaatttagtgacggaatttaag 48522558  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    ||| ||||||||||||||||||||| || ||||||||||| ||||    
T  48522557 aggaatttcatgttttccctcactacatatccctcactaattttt 48522513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 227 - 334
Target Start/End: Original strand, 12174796 - 12174903
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |    
T  12174796 aaattagtaacagaaaaaataaaattcctcacaaattccttcgtcgcaaaatttagtgacggaattagagaaggatttcatgttttccctcactaaatat 12174895  T
Q  327 ccctcact 334  Q
    ||||||||    
T  12174896 ccctcact 12174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 19081857 - 19081722
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||||||||| ||||  ||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  19081857 aaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacagaattagagagggatttca 19081758  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| ||||| |||||||||||| |||||    
T  19081757 cgttttccctctctaaaattccctcactaatttttg 19081722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 19129745 - 19129610
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||||||||| ||||  ||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  19129745 aaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacagaattagagagggatttca 19129646  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| ||||| |||||||||||| |||||    
T  19129645 cgttttccctctctaaaattccctcactaatttttg 19129610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 29549557 - 29549418
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| |||||  |||| |||||||| ||||||||||  || ||||| |||||||||||||||||||||     
T  29549557 cactactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaataaaatttctcacaaattttttagtcgcgaaatttagtgacggaattagag 29549458  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  29549457 agggattttacgttttccctcactaaatttccctcactaa 29549418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 200 - 326
Target Start/End: Original strand, 46785961 - 46786087
Alignment:
Q  200 tattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagg 299  Q
    |||||| |||||||||||||| |||||||||| ||||| ||||| || ||||| ||||||| |||||||||||||||||||| ||||||||||||| |||    
T  46785961 tattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaagttccttggtcgcaaaatttaatgacggaattagagagg 46786060  T
Q  300 gatttcatgttttccctcactaaattt 326  Q
    ||||| | |||||||||||||||||||    
T  46786061 gattttacgttttccctcactaaattt 46786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 196 - 336
Target Start/End: Original strand, 7181554 - 7181694
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||||||  ||||||||| ||||| ||||| | ||||||||||||| ||| | ||||| |||||||||||||||||||||||    
T  7181554 acactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaagaaaattcctcacatatttcatggtcacaaaatttagtgacggaattaga 7181653  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     |||||||||| ||||||||| || ||||||||||||||||    
T  7181654 gagggatttcacgttttcccttacaaaatttccctcactaa 7181694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 18890549 - 18890693
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    |||||| || |||||||||||||| |||||||||| ||||  ||||| || ||||||||||||||||   ||||||||||||||||| |||||||||||     
T  18890549 cactatcagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaatttaatggtcgcaaaatttagtaacggaattagag 18890648  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||| |||||| ||||| |||||||||||||||| ||||    
T  18890649 agggatttcacgttttctctcacaaaatttccctcactaattttt 18890693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 12989981 - 12989846
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| ||| |||||| ||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||  || |||||||    
T  12989981 aaaagcaaaattagagagagaaattggtgacggaaaaaataaaatttctcacaaattccttggtcgcaaagtttagtgactgaattagggagagatttca 12989882  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| | |||||||||||||||| |||||    
T  12989881 cgttttccctctcaaaatttccctcactaatttttg 12989846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 17200009 - 17200155
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| ||||||||| |||||||||  ||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |    
T  17200009 acactactagaaaaaacaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacggaattaaa 17200108  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     | | |||| || |||| ||||||||||||||||||||||| |||||    
T  17200109 gaagaattttatatttttcctcactaaatttccctcactaatttttg 17200155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 204 - 342
Target Start/End: Original strand, 30928385 - 30928523
Alignment:
Q  204 aggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatt 303  Q
    ||||||||||||||||| |||||||||| ||||| ||||| |||||||  || |||||||||||||||||||||||||||||  |||||||| ||  |||    
T  30928385 aggaaaagcaaaattagagagggaaattagtgacggaaaaaataaaatctctaacaaattccttggtcgcaaaatttagtgagagaattagagagaaatt 30928484  T
Q  304 tcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| |||| ||||||| ||||||||| |||||    
T  30928485 tcatgttttcactcagtaaattttcctcactaatttttg 30928523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 46865383 - 46865237
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||| |||||||||||||| ||||| ||||| ||||||| ||||||||||| ||||| ||||||||||||| | |||||||||    
T  46865383 acactactagaaaaagaaaaactagggagggaaattagtgacggaaaaaataaaatccctcacaaatttcttggccgcaaaatttagtaatggaattaga 46865284  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| ||| |||||| || ||||||||||||||| |||||    
T  46865283 gagggatttcacgttctccctctctgaatttccctcactaatttttg 46865237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 197 - 327
Target Start/End: Original strand, 50092298 - 50092428
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||| | || || |||||||||||||||||||||||     
T  50092298 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcacaaaatttagtgacggaattagag 50092397  T
Q  297 agggatttcatgttttccctcactaaatttc 327  Q
    ||||||||||||||||||||||| |||||||    
T  50092398 agggatttcatgttttccctcacaaaatttc 50092428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 9985327 - 9985472
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| |||||||||  ||||||||| ||||| ||||| || ||||||||||||||||| ||||||| |||||||| |||||||||||||     
T  9985327 cactactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatcaaattcctcacaaattctttggtcgtaaaatttattgacggaattagag 9985426  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| | ||||| |||||| |||||||||||||||| |||||    
T  9985427 agggattttacgtttttcctcacaaaatttccctcactaatttttg 9985472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 13308820 - 13308945
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| |||||||| ||||||||| |||||||||| ||| | ||||| |||||||||||||||||||  |||||||||||||||||||| | |||||||     
T  13308820 cactactaggaaaaacaaaattagagagggaaattagtgtccgaaaaaataaaattcctcacaaatttattggtcgcaaaatttagtgatgaaattagag 13308919  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||||||||||| |||||||||    
T  13308920 agggatttcatgtttttcctcactaa 13308945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 198 - 342
Target Start/End: Original strand, 17733954 - 17734099
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaa-tttagtgacggaattagaa 296  Q
    |||| ||||||||||||||||||||||  || || ||||| ||||| |||||||  |||||||||| ||||||||||||| |||| ||| ||||||||      
T  17733954 actactaggaaaagcaaaattagggagaaaatttagtgacggaaaagataaaatctctcacaaatttcttggtcgcaaaaatttaatgatggaattagcg 17734053  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||||||||||||||||||||||||||||||||||| |||||    
T  17734054 agagatttcatgttttccctcactaaatttccctcactaatttttg 17734099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 195 - 342
Target Start/End: Complemental strand, 41063338 - 41063191
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| ||||| ||||||| | ||| ||||| ||||| ||||| ||||||| ||||||| |||| ||| |||||||||||||||||||||||||    
T  41063338 cacactactagaaaaagtaaaattaagaaggaaaattagtgacggaaaaaataaaatccctcacatattctttgatcgcaaaatttagtgacggaattag 41063239  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | || ||||| ||||||| ||||||||||||| ||||||||| |||||    
T  41063238 agagagattttatgtttttcctcactaaattttcctcactaatttttg 41063191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 198 - 336
Target Start/End: Original strand, 9259184 - 9259322
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||| ||||||||  |||| ||||| ||||| ||||| | |||||| |||||||||| | ||||||||||||||||||||||||||||| |    
T  9259184 actactagaaaaaacaaaattaacgaggaaaattagtgacggaaaaaagaaaatttctcacaaatttcatggtcgcaaaatttagtgacggaattagaga 9259283  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaa 336  Q
    | ||||||| |||||||||||| ||||||||||||||||    
T  9259284 gagatttcacgttttccctcacaaaatttccctcactaa 9259322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 11917925 - 11917780
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||||||||| |||||||| |||||||||  ||||| ||||| | |||||  ||||||||||  ||||||||||||||||||||||||||||||    
T  11917925 acactattaggaaaagaaaaattagagagggaaatcagtgac-gaaaaaacaaaatatctcacaaattatttggtcgcaaaatttagtgacggaattaga 11917827  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||| |||| |||||||||| ||||| ||  |||||||| |||||    
T  11917826 aagggagttcacgttttccctctctaaacttatctcactaatttttg 11917780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 12806836 - 12806963
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacata-aaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| | | ||||  |||||||||| |||||||| |||||||||||||||||||| |    
T  12806836 cactattaggaaaagcaatattagggagggaaattagtgacagaaaaaaaataaatctctcacaaatttcttggtcgtaaaatttagtgacggaattata 12806935  T
Q  296 aagggatttcatg-ttttccctcactaa 322  Q
     |||||||||| | ||||||||||||||    
T  12806936 gagggatttcaagtttttccctcactaa 12806963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 239 - 342
Target Start/End: Original strand, 13523003 - 13523106
Alignment:
Q  239 gaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaact 338  Q
    ||||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||| |    
T  13523003 gaaaaaatataatttctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaaattccctcactaatt 13523102  T
Q  339 tttg 342  Q
    ||||    
T  13523103 tttg 13523106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 198 - 305
Target Start/End: Original strand, 25787998 - 25788105
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||||||||||||| |||| ||||| ||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  25787998 actactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaagaaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaga 25788097  T
Q  298 gggatttc 305  Q
    ||||||||    
T  25788098 gggatttc 25788105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 8940994 - 8941119
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||| ||||||||||||||| ||| ||||||||| ||||||||||||     
T  8940994 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttgatcgtaaaatttagcgacggaattagag 8941093  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    ||| |||| | |||||||||||||||    
T  8941094 aggaattttacgttttccctcactaa 8941119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 9177239 - 9177110
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||| || || ||||| || |||||||||||||||| ||||||||||||||||||||||| ||||| |     
T  9177239 cactactagaaaaaacaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacgaaattaaag 9177140  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| | ||||| |||||||||||||    
T  9177139 agggattttacgtttttcctcactaaattt 9177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 32046985 - 32046876
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| ||||| ||||| || |||||||||||||||| |||||||||||||||||||| |||||||||| || ||||| | |||||||||||||| ||||    
T  32046985 aaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgtcggaattagagagagattttacgttttccctcactatattt 32046886  T
Q  327 ccctcactaa 336  Q
    ||||||||||    
T  32046885 ccctcactaa 32046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 51973564 - 51973428
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| || || ||||| || |||||||||| ||| ||  |||||||||||||||||||||||||||||    
T  51973564 acactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcataaaatctatggtcgcaaaatttagtgacggaattaga 51973465  T
Q  296 aagggatttcatgttttccctcactaaatttccctca 332  Q
     ||  ||||||  ||||||||||| ||||||||||||    
T  51973464 gagaaatttcacattttccctcacaaaatttccctca 51973428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 13195723 - 13195577
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||| ||||||||||||||||| ||| ||||  |||||  ||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  13195723 acactactagaaaatgcaaaattagggagggagattagtgatggaaaagttaaaattcctcacgaattcctgggacgcaaaatttagtgacagaattaga 13195624  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||    ||||||||| ||||||||||||||| || |||||    
T  13195623 gagggattttgcattttccctctctaaatttccctcacaaatttttg 13195577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 12370003 - 12370086
Alignment:
Q  259 aaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||| |||||    
T  12370003 aaattctttggtcgcaaaatttagtgacggaattagagaaggattttatgttttcccttactaaatttccctcactaatttttg 12370086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 20290331 - 20290465
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||| | ||| || |||||||||||||||||||||| |  |||||||    
T  20290331 aaaagtaaaattagcgagggaaattagtgacggaaaa-atgaaattcctcacaaatttcatggccgtaaaatttagtgacggaattagagaatgatttca 20290429  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||| ||||| ||||||| |||||||| |||||    
T  20290430 cgttttctctcacaaaatttctctcactaatttttg 20290465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 27253854 - 27253953
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| ||||||||||||| |||||  |||| ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  27253854 acactactagaaaaagaaaaattagggaggaaaattaatgacggaaaaaataaaatttctcacaaattccatggtcgcaaaatttagtgacggaattaga 27253953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 233 - 322
Target Start/End: Complemental strand, 41359091 - 41359001
Alignment:
Q  233 gtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaaggga-tttcatgttttccctcactaa 322  Q
    ||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  41359091 gtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttttatgttttccctcactaa 41359001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 203 - 342
Target Start/End: Original strand, 16258492 - 16258631
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||||||||||||||| ||| | || || ||| | ||||  |||||||  |||||| |||||||||| |||||||||||||||||||||| | |||| |    
T  16258492 taggaaaagcaaaattaaggatgtaatttagtggcggaaagaataaaatatctcacagattccttggttgcaaaatttagtgacggaattatagagggtt 16258591  T
Q  303 ttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||| ||||| |||| |||||||| ||||||||| |||||    
T  16258592 ttcacgtttttcctctctaaattttcctcactaatttttg 16258631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 20581039 - 20580904
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttc 305  Q
    ||||| |||||||| |||||||||| ||||  ||||| | | ||||| |||||||||||||| ||||||||||||| | ||| ||||||| |||||||||    
T  20581039 aaaagtaaaattagagagggaaattagtgatggaaaaaaattaaatttctcacaaattccttagtcgcaaaatttaattacgaaattagagagggatttc 20580940  T
Q  306 atgttttccctcactaaatttccctcactaactttt 341  Q
    | |||||||||| ||||| ||| |||||||| ||||    
T  20580939 acgttttccctctctaaaattctctcactaattttt 20580904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 29093553 - 29093698
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| ||||||| ||||||||| |   ||| ||||| |||||||||||||||| ||||||  |||||||||||| ||| |||||||||    
T  29093553 acactactagaaaaagtaaaattaaggagggaaactaaggaccgaaaaaataaaattcctcacaagttccttaatcgcaaaatttaatgatggaattaga 29093652  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     ||| |||| |  |||||| || |||||||||||||||||| ||||    
T  29093653 gaggaattttacattttccatctctaaatttccctcactaattttt 29093698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 39749072 - 39748943
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||| |||| |||||| ||||| ||||| | |||||  ||| ||| ||  ||| |||||||||||||||||| |||| ||     
T  39749072 cactactaggaaaagcaaaattaaggagcgaaattagtgacggaaaaaaaaaaatctctcgcaatttgtttgatcgcaaaatttagtgacgaaatttgag 39748973  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
     ||||||||||||||||| |||||||||||    
T  39748972 ggggatttcatgttttccttcactaaattt 39748943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 18787923 - 18788055
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||||||| ||||  |||||  |||||||||||||||||||||  ||||||| |  ||| |||    
T  18787923 aaaagcaaaattagggatggaaattagtgac-gaaaaaataaaatccctcctaaattttttggtcgcaaaatttagtgac--aattagagattgatgtca 18788019  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||||  ||||||||||||||||| |||||    
T  18788020 cgttttccctctttaaatttccctcactaatttttg 18788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 26825369 - 26825246
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||| ||| ||| | ||||| ||||| ||||| ||||  | |||||||||||| ||| ||| |||||||||||||||||||||| ||| ||||||    
T  26825369 aaaagcaaagttatggaagaaaattagtgacggaaaaaataacttccctcacaaattctttgatcgtaaaatttagtgacggaattagagaggaatttca 26825270  T
Q  307 tgttttccctcactaaatttccct 330  Q
     |||||||||| ||||| ||||||    
T  26825269 cgttttccctctctaaaattccct 26825246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 49881182 - 49881058
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    |||| |||||||| ||||||||||| ||| || || ||||| ||||| |||||||   ||| ||||||||||||| ||||||||||| || | ||||||     
T  49881182 cactgttaggaaatgcaaaattagg-aggaaagttagtgacggaaaaaataaaatctttcataaattccttggtcacaaaatttagtaacaggattagag 49881084  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||||||||| |||||||||||    
T  49881083 agggatttcatgttatccctcactaa 49881058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 6776015 - 6775881
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||  ||||  ||||| ||||||| |||||||||||| ||||| |||||| ||||  ||||||||||| ||| |||| |    
T  6776015 aaaagcaaaattagagagggaaata-gtgatggaaaaaataaaatccctcacaaattctttggttgcaaaacttagcaacggaattagagaggaatttta 6775917  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||  ||||||||||||| |||| ||| |||||    
T  6775916 agttttttctcactaaatttctctcattaatttttg 6775881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 45918910 - 45919028
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaaggga 301  Q
    ||||||| ||||||||||| ||| ||| ||||||| ||||| | | |||| ||||| |||||||||||| |||||||||||| || |||||||| |||||    
T  45918910 taggaaatgcaaaattagg-aggaaaacttgtgacggaaaaaaatgaaatccctcataaattccttggttgcaaaatttagtaacagaattagagaggga 45919008  T
Q  302 tttcatgttttccctcacta 321  Q
    ||| ||||| ||||||||||    
T  45919009 tttgatgttatccctcacta 45919028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 9882070 - 9882162
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||| ||||| ||||||| ||||||||||| |||   ||||||||||||||||||||||||| ||| |||| ||||||| |||||||||    
T  9882070 aaattagtgacggaaaaaataaaatccctcacaaatttctt---cgcaaaatttagtgacggaattagagaggaatttaatgtttttcctcactaa 9882162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 14486705 - 14486777
Alignment:
Q  270 tcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| ||||||||||||||| || ||||||| |||||||||| |||||||| ||||||||| |||||    
T  14486705 tcgcaaaattcagtgacggaattagagagagatttcacgttttccctctctaaattttcctcactaatttttg 14486777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 204 - 326
Target Start/End: Complemental strand, 30673624 - 30673504
Alignment:
Q  204 aggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatt 303  Q
    |||||||||||||||  ||||| ||||| ||||  ||  | ||||||| | |||||||||  ||| ||  |||||||||| |  |||||||| |||||||    
T  30673624 aggaaaagcaaaatt--ggaggaaaattagtgaaggaggaaataaaatccttcacaaattttttgctcataaaatttagtaatagaattagagagggatt 30673527  T
Q  304 tcatgttttccctcactaaattt 326  Q
    |||||||||||||||||||||||    
T  30673526 tcatgttttccctcactaaattt 30673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 52621216 - 52621148
Alignment:
Q  274 aaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||| ||||||||  | | |||||||||||| ||||||||||||| ||||||||| |||||    
T  52621216 aaaatttagtgatggaattagtgaagaatttcatgtttttcctcactaaattttcctcactaatttttg 52621148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 25687355 - 25687410
Alignment:
Q  272 gcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttc 327  Q
    |||||||||||||| ||||||||| |||||| | ||||||||| || |||||||||    
T  25687355 gcaaaatttagtgaaggaattagagagggatgtaatgttttccttctctaaatttc 25687410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 1e-59; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 5399746 - 5399601
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  5399746 cactactaggaaaagcaaacttagggaggaaaatttgtgacggaaaacataaaattcctcacaaattccttggttgcaaaatttagtgacggaattagag 5399647  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  5399646 agggatttcatgttttccctcactaaatttccctcactaatttttg 5399601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 33914196 - 33914051
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||     
T  33914196 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaattttttggtcgcaaaatttagtgacggaattagag 33914097  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||    
T  33914096 agggatttcatgtttttcctcactaaatttccctcactaatttttg 33914051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 206 - 342
Target Start/End: Complemental strand, 25147849 - 25147713
Alignment:
Q  206 gaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttc 305  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  25147849 gaaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttc 25147750  T
Q  306 atgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||||||||||||| |||||    
T  25147749 atgttttccctcactaaatttccctcactaatttttg 25147713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 9058952 - 9059074
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||     
T  9058952 cactactaggaaaagcaaaattagggagggaaatttgtgactgaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaattagag 9059051  T
Q  297 agggatttcatgttttccctcac 319  Q
    |||||||||||||||||||||||    
T  9059052 agggatttcatgttttccctcac 9059074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 196 - 336
Target Start/End: Original strand, 32175736 - 32175876
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||  |||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32175736 acactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 32175835  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     |||||||| | |||||||||||||||||||||||||||||    
T  32175836 gagggattttacgttttccctcactaaatttccctcactaa 32175876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 55309211 - 55309358
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  55309211 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 55309310  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||||| | ||||||||||||||||||||||||||||| |||||    
T  55309311 agagggattttacgttttccctcactaaatttccctcactaatttttg 55309358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 22128311 - 22128457
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| |||||| ||||||||||||| ||||| ||||| |||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  22128311 acactactagaaaaaacaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggtcgcaaaatttagtgacagaattaga 22128410  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| ||||||||||||||||||||||||||||| |||||    
T  22128411 gagggatttcacgttttccctcactaaatttccctcactaatttttg 22128457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 46286228 - 46286374
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| || ||||||| ||||| ||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  46286228 acactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattaga 46286327  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||| |||||||||||| |||||||||||||||| |||||    
T  46286328 gagggatttcacgttttccctcacaaaatttccctcactaatttttg 46286374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 1638584 - 1638439
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| |||||||| |||||||||||||||||||| ||||| ||||| ||||||| ||||||| |||| |||||||||||||||||||||||||||||      
T  1638584 cactactaggaaaaacaaaattagggagggaaattagtgacggaaaaaataaaatccctcacatattctttggtcgcaaaatttagtgacggaattaggg 1638485  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| |||||||||||||||||||||||||| ||||||||| |||||    
T  1638484 aggaatttcatgttttccctcactaaattttcctcactaatttttg 1638439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 213 - 342
Target Start/End: Original strand, 2275694 - 2275823
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    |||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  2275694 aaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagagagggatttcatgtttt 2275793  T
Q  313 ccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||| ||||||||||| |||||    
T  2275794 ccctcactaaatatccctcactaatttttg 2275823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 22168405 - 22168260
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||| |||||||||||||||||||||||||| ||||||||||     
T  22168405 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattccttggtcgcaaaatttagtgccggaattagag 22168306  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| |||||||||||||||||||||||| ||||||||||| |||||    
T  22168305 aggaatttcatgttttccctcactaaatatccctcactaatttttg 22168260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 27040025 - 27040164
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| | ||||||||||||||||| | |||||||||||||||||||||||||||||     
T  27040025 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagag 27040124  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  27040125 agggatttcacgttttccctcacaaaatttccctcactaa 27040164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 37378633 - 37378768
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||| |||||  |||| ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  37378633 aaaagcaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttca 37378732  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||| |||||||||||||||| |||||    
T  37378733 tgttttccctcacaaaatttccctcactaatttttg 37378768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 19839316 - 19839171
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||     
T  19839316 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagag 19839217  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| | ||||||||||||||||||| |||| |||| |||||    
T  19839216 agggattttacgttttccctcactaaattttcctcgctaatttttg 19839171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 195 - 336
Target Start/End: Original strand, 45532577 - 45532718
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||||||| |||||||||||||  |||||||||| ||||| ||||| || |||||||||||||||| |||| |||||||||||| ||||||||||||    
T  45532577 cacactattagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttaatgacggaattag 45532676  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaa 336  Q
    | |||||||| | |||||||||||||||||||||||||||||    
T  45532677 agagggattttacgttttccctcactaaatttccctcactaa 45532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 5473986 - 5473847
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| | ||| || ||||||||||| |||||||||||||||||||||||||||||||||| |     
T  5473986 cactactagaaaaagcaaaattagcgagggaaattagtgacgggaaaaatgaaattcctcaccaattccttggtcgcaaaatttagtgacggaattaaag 5473887  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| | ||||||||||||||||||| |||||||||    
T  5473886 agggattttacgttttccctcactaaattttcctcactaa 5473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 8879010 - 8878875
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||||| || |||||||||| ||||| ||||| |||||||  |||| |||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  8879010 aaaagcaaaatcagagagggaaattagtgacggaaaaaataaaatctctcagaaattcgttggtcgcaaaatttagtgacagaattagagagggatttca 8878911  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||| ||||||| |||||    
T  8878910 tgttttccctcactaaatttccgtcactaatttttg 8878875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 18051966 - 18051831
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || ||||| |||||||||| |  |||||||||||||||||||||||||||| ||||||||||    
T  18051966 aaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaatttcacggtcgcaaaatttagtgacggaattagagagggatttca 18051867  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  18051866 cgttttccctcacaaaatttccctcactaatttttg 18051831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 4586757 - 4586887
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  4586757 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgtaaaatttagtgacggaattaga 4586856  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     |||||||| | |||||||||||||||||||    
T  4586857 gagggattttacgttttccctcactaaattt 4586887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 196 - 341
Target Start/End: Complemental strand, 12072100 - 12071955
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| |||||||||||||| ||| |||||| ||||  ||||| || |||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  12072100 acactattagaaaaagcaaaattagcgagcgaaattagtgatcgaaaaaatgaaattcttcataaattccttgatcgcaaaatttagtgacggaattaga 12072001  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  12072000 gagggattttatgttttccttcactaaatatccctcactaattttt 12071955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 196 - 336
Target Start/End: Original strand, 13564914 - 13565054
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||  || |||||| |||||||||||||||||  ||||||||||||||||||||||    
T  13564914 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcacaaattccttggtcataaaatttagtgacggaattaga 13565013  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     ||| |||| | |||||||||||||||||||||||||||||    
T  13565014 gaggaattttacgttttccctcactaaatttccctcactaa 13565054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 44783622 - 44783475
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||| ||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||||||    
T  44783622 cacactactagaaaaagcaaaactagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattag 44783523  T
Q  295 aa-agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    || |||||||||||||||||| ||  ||||| ||||||| ||| ||||    
T  44783522 aagagggatttcatgttttccttcgataaatatccctcattaattttt 44783475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 19680423 - 19680569
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| ||||||| || ||||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||    
T  19680423 acactactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattaga 19680522  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||| | |||||||||||| |||||||||||| ||| |||||    
T  19680523 gagggattttacgttttccctcacaaaatttccctcattaatttttg 19680569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 22156652 - 22156746
Alignment:
Q  248 aaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  22156652 aaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctcactaatttttg 22156746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 25026695 - 25026565
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| ||||| |||||||| |||||||||| ||||| ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  25026695 acactattagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttagtcgcaaaatttagtgacggaattaga 25026596  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     || ||||| | |||||||||||||||||||    
T  25026595 gagagattttacgttttccctcactaaattt 25026565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 9670479 - 9670604
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  9670479 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 9670578  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    ||| |||| | |||||||||||||||    
T  9670579 aggaattttacgttttccctcactaa 9670604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 30508124 - 30507999
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||| |||| ||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30508124 cactactagaaaaagcaaaattagcgaggaaaatctgtgacgaaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 30508025  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| |  ||||||||||||||    
T  30508024 agggattttacattttccctcactaa 30507999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 38223631 - 38223502
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    ||||||||||||||| ||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||   |||||    
T  38223631 aaaattagggagggagattagtgacggaaaaaataaaattccttacaaattccttggtcgcaaaatttagtgacagaattagagagggattttgcgtttt 38223532  T
Q  313 ccctcactaaatttccctcactaacttttg 342  Q
    ||||| ||||||||||||||| || |||||    
T  38223531 ccctctctaaatttccctcacaaatttttg 38223502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 29625452 - 29625337
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| ||||||||||  |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  29625452 aaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttagtgacggaattagagagggatttca 29625353  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  29625352 cgttttccctcactaa 29625337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 13028815 - 13028945
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||| |||| |||| ||||| ||||| ||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  13028815 acactactagaaaaagcaaacttagcgaggaaaattagtgacggaaaaaatgcaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 13028914  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     |||||||| | |||||||||||||||||||    
T  13028915 gagggattttacgttttccctcactaaattt 13028945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 30268987 - 30269133
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||  ||||| ||||| || ||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  30268987 acactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcgcaaattatttggtcgcaaaatttagtgacggaattaga 30269086  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     || ||||| |  ||||||||| |||||||||||||||||| |||||    
T  30269087 gagagattttacattttccctcgctaaatttccctcactaatttttg 30269133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 30283202 - 30283056
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||  ||||| ||||| || ||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  30283202 acactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcgcaaattatttggtcgcaaaatttagtgacggaattaga 30283103  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     || ||||| |  ||||||||| |||||||||||||||||| |||||    
T  30283102 gagagattttacattttccctcgctaaatttccctcactaatttttg 30283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 18715039 - 18714910
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||| ||||| |||||||||  ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  18715039 cactactagaaaaagcaatattagcgagggaaataagtgacggaaaaaataaaattcctcacaaattccttggtctcaaaatttagtgacggaattagag 18714940  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| | ||||| ||| |||||||||    
T  18714939 agggattttacgtttttccttactaaattt 18714910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 198 - 342
Target Start/End: Original strand, 24682328 - 24682470
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| ||||| |||||||||||||||||||  |||| ||||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||| |    
T  24682328 actactagaaaaagaaaaattagggagggaaattaatgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtggtggaattagaga 24682427  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||| |||||||||   | ||||||||||||||| |||||    
T  24682428 gggatttcacgttttccct--ttcaatttccctcactaatttttg 24682470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 38645887 - 38645762
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| ||||||||||  |||| ||||| || ||||||||||||||||| |||||||||||||||||||||||| |||||     
T  38645887 cactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggagttagag 38645788  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| | |||||||||||||||    
T  38645787 agggattttacgttttccctcactaa 38645762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 16915507 - 16915361
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||| ||||||| ||||| ||||  ||||| |||||||  ||||||||||  |||||||||||||||||||||  |||||||    
T  16915507 acactactagaaaaagcaaaatcagggaggaaaattagtgatggaaaaaataaaatctctcacaaatttgttggtcgcaaaatttagtgacaaaattaga 16915408  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     || |||||||| |||||||||||||||||||| ||||||| |||||    
T  16915407 gagagatttcatattttccctcactaaatttccgtcactaatttttg 16915361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 38619985 - 38619859
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| ||||||||||  |||| ||||| || |||||||||| |||||| ||||||| ||||||||||||||||||||||    
T  38619985 acactactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcataaattctttggtcgtaaaatttagtgacggaattaga 38619886  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     |||||||| | |||||||||||||||    
T  38619885 gagggattttacgttttccctcactaa 38619859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 7111946 - 7112071
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| |||||||| |||||||||||||||||||| |     
T  7111946 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgaaaaatttagtgacggaattatag 7112045  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| |  ||||||||||||||    
T  7112046 agggattttacattttccctcactaa 7112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 9913379 - 9913250
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    ||||||||||||| ||||| ||||| ||||| || |||| |||||||| || |||||||||||||||||||||| |||||||| |||||||||| |||||    
T  9913379 aaaattagggaggaaaattagtgacggaaaaaattaaatccctcacaattttcttggtcgcaaaatttagtgacagaattagagagggatttcacgtttt 9913280  T
Q  313 ccctcactaaatttccctcactaacttttg 342  Q
    ||||| ||||| ||||||||| || |||||    
T  9913279 ccctctctaaaattccctcacaaatttttg 9913250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 9238635 - 9238747
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||| ||  |||| |    
T  9238635 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagaaatttta 9238734  T
Q  307 tgttttccctcac 319  Q
     ||||||||||||    
T  9238735 cgttttccctcac 9238747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 4606828 - 4606954
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| || || |||||||   ||||||||| ||||| |||||||||||||||||||||||||    
T  4606828 acactactaggaaaagtaaaattagggagggaaattagtgacggacaaaataaaatctgtcacaaatttcttggccgcaaaatttagtgacggaattaga 4606927  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     || |||||||  ||||||||||||||    
T  4606928 gagtgatttcactttttccctcactaa 4606954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 36689804 - 36689670
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||| ||||||||  |||||||||| ||||  ||||| || ||||| |||| |||||  |||||||||||||||||||||||||||||| ||||||||||    
T  36689804 aaaaacaaaattaacgagggaaattagtgatggaaaaaatgaaatttctcataaattttttggtcgcaaaatttagtgacggaattagagagggatttca 36689705  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||| ||||||||||||||| |||| ||||    
T  36689704 cgttttcccacactaaatttccctcgctaattttt 36689670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 3613133 - 3612988
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgac-agaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||||||| |||||||||||||||||||||| || ||| | | |||| ||||| | |||||||||||||||||||||||| |||||||||| |||||||    
T  3613133 cactattagaaaaagcaaaattagggagggaatttggtggctaaaaaaaataaattccctcacaaattccttggtcgcaaattttagtgacgaaattaga 3613034  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     ||| |||||| ||||| |||| ||||| ||| |||||||| ||||    
T  3613033 gaggaatttcacgtttttcctctctaaaattctctcactaagtttt 3612988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 9239297 - 9239406
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    |||||||  |||||||||| ||||| ||||| || ||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||| |||||    
T  9239297 aaaattaacgagggaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaattgaatgacggaattagagagggatttcacgtttt 9239396  T
Q  313 ccctcactaa 322  Q
    ||||||||||    
T  9239397 ccctcactaa 9239406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 12106119 - 12105995
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||||||| ||||| |||||||| ||||||||||  |||  ||||| |||||||| |||| |||||| ||||||||||| ||||||||||||||||||     
T  12106119 cactattagaaaaagtaaaattagcgagggaaattattgatggaaaaaataaaatttctcataaattctttggtcgcaaa-tttagtgacggaattagag 12106021  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||| |||||||||||||||||||||    
T  12106020 aggggtttcatgttttccctcactaa 12105995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 54539423 - 54539294
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||  ||| ||||| ||||| ||||| || |||||||||||||||||||| ||||||||||||||||||| ||||| |     
T  54539423 cactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacgcaattaaag 54539324  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    || ||||| | |||||||||||||||||||    
T  54539323 agtgattttacgttttccctcactaaattt 54539294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 198 - 342
Target Start/End: Complemental strand, 29238559 - 29238415
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| |||||||| ||||| ||||||||||||||  |||| ||||| |||||||  ||||||||||| |||||  |||||||||||||| |||||||| |    
T  29238559 actactaggaaaaacaaaactagggagggaaattattgacggaaaaaataaaatctctcacaaattctttggtttcaaaatttagtgacagaattagata 29238460  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | ||||| ||||||| ||||||||||||||| || |||| |||||    
T  29238459 gagattttatgtttttcctcactaaatttccatcgctaatttttg 29238415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 18744100 - 18744215
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    ||||| ||||| ||||| || ||||| |||||||||| | |||||  |||||||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  18744100 aaattagtgacggaaaaaatgaaatttctcacaaatttcatggtcataaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 18744199  T
Q  327 ccctcactaacttttg 342  Q
    |||||||||| |||||    
T  18744200 ccctcactaatttttg 18744215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 30568009 - 30568144
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||| ||||||||| ||| |||||| ||||| ||||| || |||||||||||||||||  |||||| |||||||| ||||||||||||| || ||||| |    
T  30568009 aaaaacaaaattagcgagcgaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgtaaaatttaatgacggaattagagagagatttta 30568108  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||| ||||||| |||||    
T  30568109 cgttttccctcacaaaatttccttcactaatttttg 30568144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 30420033 - 30420178
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||| | ||||||| |||||||| |  ||||||||||| |||||||     
T  30420033 cactactagaaaaagcaaaattagggaggaaaattagtgacggaaaaaataaaattcattacaaattacttggtcgaagcatttagtgacgaaattagag 30420132  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| ||||||||||||| | | ||||||||  |||||||| |||||    
T  30420133 aggaatttcatgttttctcactctaaatttttctcactaatttttg 30420178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 42055534 - 42055437
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||| ||| |||||||||||||| ||||||||| ||||||  |||| || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  42055534 cactactagaaaaagcaaaattagcgagggaaatctgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtaacggaattag 42055437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 198 - 326
Target Start/End: Original strand, 4627079 - 4627207
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||||||||||||| ||||||||||  |||| ||||| || |||||||||||||||| |||| ||| |||||||||||||| ||||||| |    
T  4627079 actactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaatttcttgatcgtaaaatttagtgacgaaattagaga 4627178  T
Q  298 gggatttcatgttttccctcactaaattt 326  Q
    | ||||| |  ||||||||||||||||||    
T  4627179 gagattttacattttccctcactaaattt 4627207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 14944853 - 14944758
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| |||||  |||| || |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  14944853 aaattagtgacgtaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 14944758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 39235068 - 39234934
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaa-cataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttc 305  Q
    |||| |||||||||||||||||| |||| || ||||| ||||||||| ||||||||||  |||||||||||||||||| ||  ||||||  || ||||||    
T  39235068 aaaaccaaaattagggagggaaacttgtaacggaaaaacataaaatttctcacaaattttttggtcgcaaaatttagtaacaaaattag--agagatttc 39234971  T
Q  306 atgttttccctcactaaatttccctcactaacttttg 342  Q
    | ||||||| || |||||||||||||||||| |||||    
T  39234970 acgttttccttctctaaatttccctcactaatttttg 39234934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 37761907 - 37761977
Alignment:
Q  262 ttccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctca 332  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  37761907 ttccgtggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaattttcctca 37761977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 6553911 - 6553816
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||| ||||| ||||||| ||||| ||||| ||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||    
T  6553911 aaattagtgacggaaaaaataaaatccctcataaatttcttggtcgcaaaatttagtaacataattagagagggatttcatgttatccctcactaa 6553816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 393 - 598
Target Start/End: Original strand, 43233643 - 43233848
Alignment:
Q  393 tttaaattcaaaaccatctccaagatcatagcagacatgttagctcaattaatgcctactttaatttctaaagagcaaagaggtttcattcatggtagga 492  Q
    ||||||||||| |  ||||| |||||  ||| |||||||||||||||  | |||||| |||| |||||||   | || |||||||| |||||||| ||||    
T  43233643 tttaaattcaagattatctcaaagattctagtagacatgttagctcatatcatgccttctttgatttctaggcaacagagaggttttattcatggaagga 43233742  T
Q  493 atataaaggattgcattcttatagcttcagaagctattaatttgcttgatgcaaagtcatttggtggcaacatagctttggaagtggatatagccaaagc 592  Q
    | || || ||||||||| | |||||||||||| | |||||||| |||||| | ||||||||||| || || || ||| || | || ||||||||||| ||    
T  43233743 acatcaaagattgcattttcatagcttcagaaaccattaatttacttgatactaagtcatttggaggtaatattgctctgaaggttgatatagccaaggc 43233842  T
Q  593 ctttga 598  Q
     |||||    
T  43233843 ttttga 43233848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 227 - 318
Target Start/End: Complemental strand, 313694 - 313603
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctca 318  Q
    ||||| ||||| ||||| ||||||| ||||| |||||| |||||||||||||||||| ||  ||||||| |||||||||||||| |||||||    
T  313694 aaattagtgacggaaaaaataaaatccctcataaattctttggtcgcaaaatttagtaacataattagagagggatttcatgttatccctca 313603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 34557304 - 34557191
Alignment:
Q  213 aaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgtttt 312  Q
    |||||||| |||| ||||| ||||| ||||| ||||||| | ||||||||||||||||| ||||||||| ||||||||||| | |  ||||| |  ||||    
T  34557304 aaaattagtgaggaaaattagtgacggaaaaaataaaatccttcacaaattccttggtcacaaaatttaatgacggaattaaagacagattttacctttt 34557205  T
Q  313 ccctcactaaattt 326  Q
    ||||| ||||||||    
T  34557204 ccctcgctaaattt 34557191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 45091338 - 45091282
Alignment:
Q  270 tcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaattt 326  Q
    |||||||||||||||||||||||||| | |||||| | |||||||||||||||||||    
T  45091338 tcgcaaaatttagtgacggaattagagaaggattttacgttttccctcactaaattt 45091282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 25225236 - 25225092
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| ||||| ||||||||||||||||||   |||| ||||| |||||||  ||  ||||||| ||| |||||||||||| | || |||||||    
T  25225236 cacactactagaaaaagaaaaattagggagggaaatcaatgacggaaaatataaaat--ctgtcaaattctttgatcgcaaaatttaataacagaattag 25225139  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    | |||||||||| | ||||  || ||||||||| |||| ||| ||||    
T  25225138 agagggatttcacgatttctttctctaaatttctctcattaattttt 25225092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 23104442 - 23104371
Alignment:
Q  240 aaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttt 311  Q
    |||| ||||||||| ||||||||||  |||||||||||||||| |||   |||||| |||||||||||||||    
T  23104442 aaaaaataaaattcatcacaaattctatggtcgcaaaatttagggacatgattagagagggatttcatgttt 23104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 12302631 - 12302680
Alignment:
Q  378 attgcaatggccaattttaaattcaaaaccatctccaagatcatagcaga 427  Q
    ||||| || |||||||| |||||||||| ||||||||||||| |||||||    
T  12302631 attgctattgccaatttcaaattcaaaatcatctccaagatcttagcaga 12302680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 4e-59; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 17824616 - 17824760
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  17824616 cactactagaaaaagcaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagag 17824715  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  17824716 agggatttcatgttttccctcactaaatttccctcactaattttt 17824760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 17103864 - 17104010
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17103864 acactactagaaaaaacaaaattagagagagaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattaga 17103963  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||||||||||||||| |||||    
T  17103964 gagggatttcatgttttccctcactaaatttccctcactaatttttg 17104010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 195 - 342
Target Start/End: Complemental strand, 3823272 - 3823125
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3823272 cacactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattctttggtcgcaaaatttagtgacggaattag 3823173  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||||| | ||||||||||||||||||||||||||||| |||||    
T  3823172 agagggattttacgttttccctcactaaatttccctcactaatttttg 3823125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 24576024 - 24576169
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24576024 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 24576123  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || |||||||||||||||||| |||||| ||||||||||| |||||    
T  24576124 agagatttcatgttttccctcgctaaatatccctcactaatttttg 24576169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 8555304 - 8555443
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||     
T  8555304 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagag 8555403  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    || ||||| |||||||||||||||||||||||||||||||    
T  8555404 agagattttatgttttccctcactaaatttccctcactaa 8555443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 33652694 - 33652559
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  33652694 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggagttagagaaggatttca 33652595  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||| ||||||||||| |||||    
T  33652594 tgttttccctcactaaatatccctcactaatttttg 33652559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 19241005 - 19240859
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19241005 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 19240906  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||| |||| | |||||||||||| |||||||||||||||| |||||    
T  19240905 gaggaattttacgttttccctcacaaaatttccctcactaatttttg 19240859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 19314189 - 19314043
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19314189 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 19314090  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||| |||| | |||||||||||| |||||||||||||||| |||||    
T  19314089 gaggaattttacgttttccctcacaaaatttccctcactaatttttg 19314043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 4331115 - 4330970
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||     
T  4331115 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagag 4331016  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| |||||| |||||||||||| |||||||||||||||| |||||    
T  4331015 aggaatttcacgttttccctcacaaaatttccctcactaatttttg 4330970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 17810435 - 17810290
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||| ||||| ||||| ||||| || |||||||||||||||| ||||||||||||||||||||||| |||||||     
T  17810435 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacgaaattagag 17810336  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  17810335 agggatttcatgttttccctcactaaatatccctcactaatttttg 17810290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 27910764 - 27910909
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||     
T  27910764 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcacaaaatttagtgacggaattagag 27910863  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||    
T  27910864 agggatttcatgttttccctcagtaaatatccctcactaatttttg 27910909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 27957183 - 27957328
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||     
T  27957183 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcacaaaatttagtgacggaattagag 27957282  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||    
T  27957283 agggatttcatgttttccctcagtaaatatccctcactaatttttg 27957328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 18010070 - 18010205
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| ||| |||||| ||||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  18010070 aaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagagagggatttca 18010169  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||| ||||| ||||||||||| |||||    
T  18010170 tgttttccctcaataaatatccctcactaatttttg 18010205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 203 - 342
Target Start/End: Complemental strand, 37992230 - 37992091
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||| | ||||| |||| || ||||||||||||||||||||||||||| || |||    
T  37992230 taggaaaagcaaaattagggaggaaaattagtgacggaaaacataaaatccttcacatattctttagtcgcaaaatttagtgacggaattagagagagat 37992131  T
Q  303 ttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  37992130 ttcatgttttccctcactaaattttcctcactaatttttg 37992091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 27869376 - 27869230
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||  ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27869376 acactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattaga 27869277  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     || ||||||||||||||||||||||||| || |||||||| |||||    
T  27869276 gagagatttcatgttttccctcactaaatatctctcactaatttttg 27869230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 29351061 - 29350915
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgac-agaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| |||||| || |||||||||||||||| | ||||||||||||||||||||| |||||||    
T  29351061 cactactagaaaaagcaaaattagcgagggaaattagtgactagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgcaattaga 29350962  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||| ||||||||||| |||||    
T  29350961 gagggatttcatgttttccctcactaaatatccctcactaatttttg 29350915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 6816383 - 6816528
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||| |||||| |||||||||| ||||   |||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||||     
T  6816383 cactactaggaaaagcataattagcgagggaaattagtgatgaaaaaaataaaatttctcacaaattccttggttgcaaaatttagtggcggaattagag 6816482  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  6816483 agggatttcatgttttccctcactaaatatccctcactaatttttg 6816528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 196 - 341
Target Start/End: Original strand, 18844543 - 18844688
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||||||||||||||||||||| || |||||||||  |||||||||||||||||||||||||  |||||||||||||||| | ||  |||||||    
T  18844543 acactactaggaaaagcaaaattagggatggtaatttgtgatggaaaacataaaattcctcacaaattttttggtcgcaaaatttaataacaaaattaga 18844642  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
     |||||||||||||||||| ||||||||||||||||||||| ||||    
T  18844643 gagggatttcatgttttccttcactaaatttccctcactaattttt 18844688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 22939450 - 22939305
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| || ||||||| ||||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||     
T  22939450 cactactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattcctttgtcgcaaaatttagtgacggaattagag 22939351  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||||||||||||||||||||||| || |||||||| |||||    
T  22939350 agagatttcatgttttccctcactaaatatctctcactaatttttg 22939305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 24193196 - 24193341
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | |||||||||||||||||||||||||||||     
T  24193196 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagag 24193295  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || |||||||||||||||||||| ||||||| |||||||| |||||    
T  24193296 agagatttcatgttttccctcacaaaatttctctcactaatttttg 24193341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 8789977 - 8789873
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8789977 cactactaggaaaagcaaaattagggaggaaaatttgtgactgaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 8789878  T
Q  297 aggga 301  Q
    |||||    
T  8789877 aggga 8789873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 195 - 322
Target Start/End: Original strand, 19488059 - 19488186
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  19488059 cacactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 19488158  T
Q  295 aaagggatttcatgttttccctcactaa 322  Q
    | ||| ||||||| ||||||||||||||    
T  19488159 agaggaatttcatattttccctcactaa 19488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 43431559 - 43431698
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||     
T  43431559 cactactagaaaaagaaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggttgcaaaatttagtgacgaaattagag 43431658  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  43431659 agggattttacgttttccctcactaaatttccctcactaa 43431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 10917965 - 10917839
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  10917965 acactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttgattgcaaaatttagtgacggaattaga 10917866  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||||||| |||||||| |||||||||    
T  10917865 gagggattgcatgtttttcctcactaa 10917839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 19256350 - 19256220
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||  |||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19256350 acactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga 19256251  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     |||||||| | |||||||||||||||||||    
T  19256250 gagggattttacgttttccctcactaaattt 19256220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 21350616 - 21350470
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||| ||  ||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21350616 acactactagaaaaagcaaaataagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 21350517  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     | |||||| | ||||| ||||||||||||||||||||||| |||||    
T  21350516 gatggattttacgtttttcctcactaaatttccctcactaatttttg 21350470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 11938881 - 11938753
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  11938881 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaa-atgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagag 11938783  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| | |||||||||||||||||||    
T  11938782 agggattttacgttttccctcactaaattt 11938753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 32961786 - 32961651
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||  ||||||||||| || |||||||||||||||| |||||||||||| |||||||||||||||||| ||| |||| |    
T  32961786 aaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaagtttagtgacggaattagagaggaatttta 32961687  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
      |||||||||||||||||||||||||||| |||||    
T  32961686 cattttccctcactaaatttccctcactaatttttg 32961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 13060930 - 13061056
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||| ||||| ||||| ||||| || |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  13060930 acactactagcaaaagcaaaattagcgaggtaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacagaattaga 13061029  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     ||||||||||||||||||||||||||    
T  13061030 gagggatttcatgttttccctcactaa 13061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 4647754 - 4647900
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || |||||||||||||||| | | |||||||||||||||||||||||||||    
T  4647754 acactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaattaga 4647853  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||||  ||||||||||| ||||||| |||||||| |||||    
T  4647854 gagggatttcacattttccctcacaaaatttctctcactaatttttg 4647900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 30688074 - 30687944
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||  ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30688074 acactactagaaaaagcaaaattagcgagggaaatcagtgaccgaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 30687975  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     |||||||| |  |||||| |||||||||||    
T  30687974 gagggattttacattttccttcactaaattt 30687944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 32248046 - 32247921
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||  |||||||||| ||||| ||||| || |||||||||||||||||  |||||||||||||||||||||||||||||     
T  32248046 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaattagag 32247947  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||||| |||||||||||||||    
T  32247946 agggatttcacgttttccctcactaa 32247921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 9915051 - 9915185
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| ||| |||||| ||||| ||||| || |||||||||||||||||| || ||||||||||||||||| | |||||| ||||||||||    
T  9915051 aaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccatg-tcgcaaaatttagtgacaggattagagagggatttca 9915149  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  9915150 cgttttccctcacaaaatttccctcactaatttttg 9915185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 23752285 - 23752411
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||||||| |||||||||||||| |||||| ||| ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23752285 acactattagaaaaagcaaaattagcgagggatattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattaga 23752384  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     || ||||| |  ||||||||||||||    
T  23752385 gagtgattttacattttccctcactaa 23752411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 25655858 - 25655980
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||| |||||||||||||||||||  ||||||||     
T  25655858 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgatagaattagag 25655957  T
Q  297 agggatttcatgttttccctcac 319  Q
    |||||||||| ||||||||||||    
T  25655958 agggatttcacgttttccctcac 25655980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 30466953 - 30467083
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| |||||  |||||||||||| ||||| ||||||||||||||||||||| |||||||||    
T  30466953 acactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaattaaaattcctcataaatttcttggtcgcaaaatttagtgatggaattaga 30467052  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     || ||||| | |||||||||||||||||||    
T  30467053 gagagattttacgttttccctcactaaattt 30467083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 40289420 - 40289565
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||  |||||||| |||| ||||| ||||| ||||| || || || |||||||||||||||||||||||||||||||||||||||||     
T  40289420 acactactagaaaaattaaaattagcgaggaaaattagtgacggaaaaaatgaattttctcacaaattccttggtcgcaaaatttagtgacggaattag- 40289518  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||| | ||||||||||||||||||||||||||||| |||||    
T  40289519 gagggattttacgttttccctcactaaatttccctcactaatttttg 40289565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 6817191 - 6817046
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||  ||| ||||  ||||| ||||| || |||||||||||||||| ||||||| |||||||||||||||||||||||     
T  6817191 cactactagaaaaagcaaaattagcaaggaaaatcagtgacggaaaaaatgaaattcctcacaaatttcttggtcacaaaatttagtgacggaattagag 6817092  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    || ||||| |  |||||||||||||||||||||||||||| |||||    
T  6817091 agagattttacattttccctcactaaatttccctcactaatttttg 6817046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 222 - 326
Target Start/End: Original strand, 5670194 - 5670298
Alignment:
Q  222 gagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcacta 321  Q
    |||||||||| ||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  5670194 gagggaaattagtgacggaaaaaatggaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcacta 5670293  T
Q  322 aattt 326  Q
    |||||    
T  5670294 aattt 5670298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 16061939 - 16062083
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||||  |||||||||||| ||||||||||||||||     
T  16061939 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatgtagtgacggaattagag 16062038  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    || ||||||| ||||| |||||  |||||||||||||||| ||||    
T  16062039 agtgatttcacgtttttcctcaaaaaatttccctcactaattttt 16062083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 210 - 326
Target Start/End: Complemental strand, 24636776 - 24636660
Alignment:
Q  210 agcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgt 309  Q
    ||||||||||  |||||||||| ||||| ||||| || |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| | ||    
T  24636776 agcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagagggattttacgt 24636677  T
Q  310 tttccctcactaaattt 326  Q
    |||||||||||||||||    
T  24636676 tttccctcactaaattt 24636660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 26399028 - 26399132
Alignment:
Q  218 tagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctc 317  Q
    |||||||||||||| ||||| ||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  26399028 tagggagggaaattagtgacggaaaaaataaaatctctcacaaattcgttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctc 26399127  T
Q  318 actaa 322  Q
    |||||    
T  26399128 actaa 26399132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 197 - 333
Target Start/End: Complemental strand, 29345208 - 29345072
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||||||||||||||||| ||||| ||||| |||||||   ||||||||| ||| || |||||||||||||||||||||||      
T  29345208 cactactagaaaaagaaaaattagggagggaaattagtgacggaaaaaataaaatctttcacaaatttcttagtggcaaaatttagtgacggaattaggg 29345109  T
Q  297 agggatttcatgttttccctcactaaatttccctcac 333  Q
    |||||||||| |||||||||| |||||||||||||||    
T  29345108 agggatttcacgttttccctctctaaatttccctcac 29345072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 25000431 - 25000560
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || |||||||||||||||||||| |||||| ||||| ||||||||||||||     
T  25000431 cactactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcagaattttgtgacggaattagag 25000530  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||| | | |||||||||||||||||||    
T  25000531 agggatgttacgttttccctcactaaattt 25000560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 5879299 - 5879196
Alignment:
Q  239 gaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaact 338  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||| | ||||| ||||||||||||||||||||||| |    
T  5879299 gaaaaaataaaattcctcacaaatttcttggtcgtaaaatttagtgacggaattagagaggcattttacgtttttcctcactaaatttccctcactaatt 5879200  T
Q  339 tttg 342  Q
    ||||    
T  5879199 tttg 5879196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 8824962 - 8824837
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| ||||  ||||| || |||||||||||| ||||||| |||||||||||||||||||||||||||     
T  8824962 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatcaaattcctcacagattccttagtcgcaaaatttagtgacggaattagag 8824863  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| |  |||| |||||||||    
T  8824862 agggattttacatttttcctcactaa 8824837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 25273328 - 25273452
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||  |||||||||| ||||| ||||| || ||| ||||||||||||| ||||||||||||||||||||| ||||||||     
T  25273328 cactactagaaaaagcaaaattaacgagggaaattagtgac-gaaaaaatgaaagtcctcacaaattctttggtcgcaaaatttagtgacagaattagag 25273426  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    |||||||| | |||||||||||||||    
T  25273427 agggattttacgttttccctcactaa 25273452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 31399508 - 31399633
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||  |||||||||| ||||   |||| || |||||||||||||||||| |||||||||||||||||||||||||||||     
T  31399508 cactactagaaaaaacaaaattaacgagggaaattagtgatgaaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagag 31399607  T
Q  297 agggatttcatgttttccctcactaa 322  Q
    | |||||||| |||||||||||||||    
T  31399608 atggatttcacgttttccctcactaa 31399633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 193 - 342
Target Start/End: Complemental strand, 9631545 - 9631395
Alignment:
Q  193 cacacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgac-ggaat 291  Q
    ||||||||| ||| ||||||||||||||  ||| ||||| ||||| ||||| ||||||||||||||||||||  |  ||||||||||||||||| |||||    
T  9631545 cacacactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaataaaattcctcacaaattctatactcgcaaaatttagtgacgggaat 9631446  T
Q  292 tagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||| ||  |||||| ||||||| |||| ||||||||||| |||| |||||    
T  9631445 tagagagaaatttcacgttttccttcacaaaatttccctcgctaatttttg 9631395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 15251728 - 15251595
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||  ||||| | ||  ||||||||||||||||||||| |||||||| | ||||||||    
T  15251728 aaaagcaaaattagggagggaaattagtgacggaaaaaataaaatctctcacgatttt-ttggtcgcaaaatttagtgacagaattagagaaggatttca 15251630  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     ||||||||||  ||||||| ||||||||| |||||    
T  15251629 cgttttccctctttaaattt-cctcactaatttttg 15251595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 19493691 - 19493781
Alignment:
Q  233 gtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaaggga-tttcatgttttccctcactaa 322  Q
    ||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  19493691 gtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttttatgttttccctcactaa 19493781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 31344172 - 31344311
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| || |||||| |||||||| || ||||||| ||||  ||||| || ||||| |||| ||||| |||| |||||||||||| |||||||||||||     
T  31344172 cactactaagaaaagtaaaattagagaaggaaattagtgatggaaaaaatcaaatttctcataaatttcttgatcgcaaaatttaatgacggaattagag 31344271  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaa 336  Q
    ||| ||||||  ||||||||| ||||| ||||||||||||    
T  31344272 aggaatttcacattttccctctctaaaattccctcactaa 31344311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 33412976 - 33413095
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| |||||||||| || || ||||| || ||||||||||||||||||      ||||||||||||||||||||||||    
T  33412976 acactactagaaaaag-aaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattcc------gcaaaatttagtgacggaattaga 33413068  T
Q  296 aagggatttcatgttttccctcactaa 322  Q
     |||||||| | |||||||||||||||    
T  33413069 gagggattttacgttttccctcactaa 33413095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 6084245 - 6084351
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||||||||||  ||||| ||||| ||||| |||||||  ||| ||||||||||||||  ||||||||||||||||||||||    
T  6084245 acactaatagaaaaagcaaaattagggagataaattagtgacggaaaaaataaaat--ctcccaaattccttggtctaaaaatttagtgacggaattaga 6084342  T
Q  296 aagggattt 304  Q
     || |||||    
T  6084343 gagagattt 6084351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 21219240 - 21219383
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| ||||| || ||| |||||| ||||| ||||| || ||||| |||| |||||  |||||||||||||||||||| |||||||||     
T  21219240 cactactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattactcataaattttttggtcgcaaaatttagtgatggaattagag 21219339  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||| || || ||||  ||||||||||||||||| |||||    
T  21219340 agggatttcacgtatt-cctc-gtaaatttccctcactaatttttg 21219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 25274734 - 25274654
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaa 277  Q
    ||||| ||| |||||||||||||| |||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||||    
T  25274734 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaa 25274654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 190 - 342
Target Start/End: Original strand, 3692163 - 3692316
Alignment:
Q  190 agacacacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacgg 288  Q
    |||| |||| || ||| |||| |||||| |||||| |||||  |||| |||||| | ||||||||||||||||||| || |||  |||||||||| | ||    
T  3692163 agacccacattagtagaaaaaacaaaatcagggagagaaataagtgatagaaaaaaataaaattcctcacaaattctttagtcataaaatttagtaatgg 3692262  T
Q  289 aattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||| | |||||| | ||||| ||||  ||||||||||||||||| |||||    
T  3692263 aattagagaaggattttacgttttacctctataaatttccctcactaatttttg 3692316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 42700655 - 42700743
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagt 283  Q
    ||||||| ||| ||||| |||||||| |||| ||||  ||||| ||||| || |||||||||||||||||||| |||||||||||||||    
T  42700655 cacactactagaaaaagtaaaattagcgaggaaaatcagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagt 42700743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 41527730 - 41527825
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||| ||||| ||||||| ||||| |||||||||| |||||||||||||| ||  ||||||  || ||||||||||| |||||||||||    
T  41527730 aaattagtgacggaaaaaataaaatccctcataaattccttgatcgcaaaatttagtaacataattagggagagatttcatgttatccctcactaa 41527825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 17003400 - 17003270
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||||||||||| ||||| |||   ||||| ||||||  ||||| |||||||||| || ||||||||| |||| | ||||||    
T  17003400 acactactagaaaaagcaaaattagggaggaaaattagtgtgggaaaaaataaaacccctcataaattccttgatcacaaaatttaatgactgtattaga 17003301  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     ||  |||| | |||||||||| ||||||||    
T  17003300 gagcaattttacgttttccctctctaaattt 17003270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 293
Target Start/End: Original strand, 2265385 - 2265474
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 293  Q
    ||||||||| ||||||||||| | ||||| ||||| ||||| ||||||| | |||||||||| ||| || |||||||||||||| ||||||    
T  2265385 taggaaaagtaaaattagggacg-aaattagtgacggaaaaaataaaatccttcacaaattctttgatcacaaaatttagtgacagaatta 2265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 14304356 - 14304241
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||  ||||| || |||| |||| |||||| | | |||  ||||||||||| | ||| || | |||||||||     
T  14304356 aaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaatccctcgcaaatttcctcgtcataaaatttagtgccagaaataaagagggatttcg 14304257  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  14304256 cgttttccctcactaa 14304241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 15289731 - 15289660
Alignment:
Q  245 ataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctca 318  Q
    |||||||  ||||||||||| ||||||| |||||||||||| ||||||||  ||  ||||||||||||||||||    
T  15289731 ataaaatctctcacaaattctttggtcgtaaaatttagtgatggaattag--agatatttcatgttttccctca 15289660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 15470100 - 15470029
Alignment:
Q  245 ataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctca 318  Q
    |||||||  ||||||||||| ||||||| |||||||||||| ||||||||  ||  ||||||||||||||||||    
T  15470100 ataaaatctctcacaaattctttggtcgtaaaatttagtgatggaattag--agatatttcatgttttccctca 15470029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 35678058 - 35678154
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 292  Q
    |||| ||||| ||||||||||||| ||||| |||||  |||  ||||| ||||||| | |||||||||||||  ||| ||||||| |||||| ||||    
T  35678058 acaccattagaaaaagcaaaattaaggaggaaaattaatgaaggaaaaaataaaatccatcacaaattccttattcgtaaaatttggtgacgaaatt 35678154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 457 - 509
Target Start/End: Original strand, 44129559 - 44129611
Alignment:
Q  457 tttctaaagagcaaagaggtttcattcatggtaggaatataaaggattgcatt 509  Q
    ||||| ||||||||||||  ||||||||||||||||||||||| || ||||||    
T  44129559 tttctcaagagcaaagagcattcattcatggtaggaatataaaagactgcatt 44129611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 279 - 341
Target Start/End: Complemental strand, 25651133 - 25651071
Alignment:
Q  279 ttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    ||||||||||||||||| || || || | ||||||| |||||||| |||||||||||| ||||    
T  25651133 ttagtgacggaattagagagagactttacgttttccttcactaaacttccctcactaattttt 25651071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 203 - 341
Target Start/End: Complemental strand, 10291 - 10153
Alignment:
Q  203 taggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggat 302  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||    
T  10291 taggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattctttaatcgcaaaatttagtgacggaattagagagggat 10192  T
Q  303 ttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  10191 ttcatgttttccctcagtaaatttccctcactaattttt 10153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 103; Significance: 9e-51; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 19743 - 19597
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||||||||||||  ||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19743 acactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 19644  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||||||||||||||||||| ||||||||||| |||||    
T  19643 gagggatttcatgttttccctcactaaatatccctcactaatttttg 19597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 100; Significance: 5e-49; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 195 - 342
Target Start/End: Original strand, 9227 - 9374
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  9227 cacactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 9326  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | | |||||| | ||||||||||||||||||||||||||||| |||||    
T  9327 agaaggattttacgttttccctcactaaatttccctcactaatttttg 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 98; Significance: 8e-48; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 11031 - 10886
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    |||| |||||||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||     
T  11031 cactgttaggaaaagcaaaattagggaaggaaatttgtgacgaaaaatataaaattcctcacaaattccttggtcacaaaatttagtgacagaattagag 10932  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||| |||||||||||| ||||| ||||||||||||||||| |||||    
T  10931 aggaatttcatgtttttcctcagtaaatttccctcactaatttttg 10886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 917 - 1064
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaaca-taaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    |||||| ||| |||||||||||||| ||||||||||  |||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  917 acactactagaaaaagcaaaattagcgagggaaattactgacggaaaaaaataaaattcctcataaattccttggtcgcaaaatttagtgacggaattag 1016  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    | |||||||||||||||||||||||||||| ||||||||||| |||||    
T  1017 agagggatttcatgttttccctcactaaatatccctcactaatttttg 1064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 96; Significance: 1e-46; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 8120 - 8255
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| ||||||||||  |||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8120 aaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 8219  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||| ||||||||||| |||||    
T  8220 tgttttccctcactaaatatccctcactaatttttg 8255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 21852 - 21987
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| ||||||||||  |||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21852 aaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaattagagagggatttca 21951  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||| ||||||||||| |||||    
T  21952 tgttttccctcactaaatatccctcactaatttttg 21987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 84442 - 84297
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||||||||||||  ||||||||| ||||| ||||| || |||||||||||||||| | ||||| |||||||||||||||||||||||     
T  84442 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaattagag 84343  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||  ||||||||||| |||||||||||||||| |||||    
T  84342 agggatttcacattttccctcacaaaatttccctcactaatttttg 84297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 5979 - 6124
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||     
T  5979 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagag 6078  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||    
T  6079 agggattttacgttttccctcactaaatttccctcactaatttttg 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 93; Significance: 8e-45; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 198 - 342
Target Start/End: Complemental strand, 7643 - 7499
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||| |    
T  7643 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagaga 7544  T
Q  298 gggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||    
T  7543 gggattttacgttttccctcactaaatttccctcactaaattttg 7499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 93; Significance: 8e-45; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 3882 - 3746
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||| ||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3882 acactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 3783  T
Q  296 aagggatttcatgttttccctcactaaatttccctca 332  Q
     |||||||| | |||||||||||||||||||||||||    
T  3782 gagggattttacgttttccctcactaaatttccctca 3746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 202913 - 202769
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||     
T  202913 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaatttagtgacggaattagag 202814  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    ||| |||| | ||||||||||||||||||| ||||||||| ||||    
T  202813 aggaattttacgttttccctcactaaattttcctcactaattttt 202769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 276207 - 276279
Alignment:
Q  270 tcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||||||| |||||    
T  276207 tcgcaaaatttagtgacggaattagagagggatttcacgttttctctcacaaaatttccctcactaatttttg 276279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 274665 - 274733
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattcc 265  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || |||||| |||||||||||    
T  274665 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcacaaattcc 274733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 196 - 336
Target Start/End: Complemental strand, 26623 - 26483
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| || ||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26623 acactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattaga 26524  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     |||||||| | ||||||||||||||||| |||||||||||    
T  26523 gagggattttacgttttccctcactaaatgtccctcactaa 26483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 37787 - 37932
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||| |||||||||   |||||||| ||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||||||     
T  37787 cactactagaaaaaacaaaattagcaggggaaattagtgacggaaaaaataaaattcctcacaaattttatggtcgcaaaatttagtgacggaattagag 37886  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||    
T  37887 agggatttcatgttttccctcacaaaatttccctcactaatttttg 37932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 84; Significance: 2e-39; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 84684 - 84799
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |    
T  84684 aaaagcaaaattagtgagggaaattagtgacagaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagagggatttta 84783  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  84784 cgttttccctcactaa 84799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 207 - 334
Target Start/End: Original strand, 120997 - 121124
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||| |||||||||| || |   |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  120997 aaaagtaaaattagagagggaaattagttatgaaaaaaataaaatttctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttca 121096  T
Q  307 tgttttccctcactaaatttccctcact 334  Q
     |||||||||| ||||| ||||||||||    
T  121097 cgttttccctctctaaaattccctcact 121124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 616
Target Start/End: Complemental strand, 232138 - 231894
Alignment:
Q  372 agaccaattgcaatggccaattttaaattcaaaaccatctccaagatcatagcagacatgttagctcaattaatgcctactttaatttctaaagagcaaa 471  Q
    |||||||||||| |||| |||||||||||||||    | || |||||  | ||||| | |||| ||||| | |||||  |||||||||||||| | ||||    
T  232138 agaccaattgcattggctaattttaaattcaaagtgctttcaaagattcttgcagataggttatctcaaattatgccagctttaatttctaaacaacaaa 232039  T
Q  472 gaggtttcattcatggtaggaatataaaggattgcattcttatagcttcagaagctattaatttgcttgatgcaaagtcatttggtggcaacatagcttt 571  Q
    |||||||||| || ||||| || || || || |||||  |||  || |||||||| |||||||| |||||| ||||||| ||||| ||||| || ||| |    
T  232038 gaggtttcatacaaggtagaaacatcaaagaatgcatctttactgcctcagaagccattaatttacttgattcaaagtcttttggaggcaatattgctct 231939  T
Q  572 ggaagtggatatagccaaagcctttgatacattagaatggagttt 616  Q
      ||||||||||||| ||  | ||||||||  | |||||||||||    
T  231938 aaaagtggatatagcaaagacttttgatactcttgaatggagttt 231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 14989 - 15119
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||| ||||| || |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  14989 acactactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattaga 15088  T
Q  296 aagggatttcatgttttccctcactaaattt 326  Q
     |||||||| | |||||||||||||||||||    
T  15089 gagggattttacgttttccctcactaaattt 15119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 197 - 326
Target Start/End: Complemental strand, 22350 - 22221
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| |||||||||| |||||  |||| || |||||||||||||||||||| |||||||||||||||||||||||||||     
T  22350 cactactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagag 22251  T
Q  297 agggatttcatgttttccctcactaaattt 326  Q
    |||||||| | |||||||||||||||||||    
T  22250 agggattttacgttttccctcactaaattt 22221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 10673 - 10792
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| |    
T  10673 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagaggaatttta 10772  T
Q  307 tgttttccctcactaaattt 326  Q
     |||||||||||||||||||    
T  10773 cgttttccctcactaaattt 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 12781 - 12647
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| |||||||||| ||||| ||||| || |||||||||| ||||||  ||||||||||||||||||||||||||||| ||||| ||||    
T  12781 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattctatggtcgcaaaatttagtgacggaattagagaggga-ttca 12683  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
     |||||||||||| |||||||||||||||| |||||    
T  12682 cgttttccctcacaaaatttccctcactaatttttg 12647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 194 - 342
Target Start/End: Original strand, 3159 - 3305
Alignment:
Q  194 acacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 293  Q
    |||||||| ||| ||||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||||||| | |||||||||||||||||||| ||||||    
T  3159 acacactaatagaaaaagaaaaattagggagggaaattagtgacggaaaagataaagttcctcacaaatttcatggtcgcaaaatttagtgacagaatta 3258  T
Q  294 gaaagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |  |||||||||| |||||||||  ||||||||||||||| || |||||    
T  3259 gtgagggatttcacgttttccct--ctaaatttccctcacaaatttttg 3305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 78; Significance: 7e-36; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 219775 - 219630
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaa 296  Q
    ||||| ||| |||||||||||||| || ||||||| ||||| ||||| || ||||||||||||||||  ||  |||||||||||||| |||||||||||     
T  219775 cactactagaaaaagcaaaattagcgacggaaattagtgacggaaaaaatgaaattcctcacaaattttttaatcgcaaaatttagtaacggaattagag 219676  T
Q  297 agggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||||||| || |||||||| |||||    
T  219675 agggatttcatgttttccctcactaaatatctctcactaatttttg 219630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 182668 - 182544
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaa 297  Q
    |||| ||| ||||| |||||||| |||||||||| ||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  182668 actactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagaga 182569  T
Q  298 gggatttcatgttttccctcactaa 322  Q
    ||||||| |   |||||||||||||    
T  182568 gggattttacaatttccctcactaa 182544  T

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Target: scaffold0009; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 215673 - 215781
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| ||| |||||| | ||| ||||| || |||||||||||||||||||||||||||||        ||||||||||| |||||||| |    
T  215673 aaaagcaaaattagcgagagaaattagcgacggaaaaaatgaaattcctcacaaattccttggtcgcaaa-------tacggaattagagagggatttta 215765  T
Q  307 tgttttccctcactaa 322  Q
     |||||||||||||||    
T  215766 cgttttccctcactaa 215781  T

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Target: scaffold0023 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 39702 - 39848
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| |||||||||||||| |||||||||| ||||  ||||| || ||||||||| |||||| | |||| ||||||||||||||||||||||||    
T  39702 acactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcccaaatttcatggttgcaaaatttagtgacggaattaga 39801  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaacttttg 342  Q
     || ||||||| |||||||||||  |||||||||||||||| |||||    
T  39802 gagagatttcacgttttccctcataaaatttccctcactaatttttg 39848  T

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Target: scaffold0161 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 6924 - 6789
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    |||||||||||||| ||||||||||  |||| ||||| || |||||| || |||||| ||| || |||||||||| ||||||||||||| ||| ||||||    
T  6924 aaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcttcgcaaatttcttcgttgcaaaatttaatgacggaattagagaggaatttca 6825  T
Q  307 tgttttccctcactaaatttccctcactaacttttg 342  Q
    |||||||||||||||||||||||| ||||| |||||    
T  6824 tgttttccctcactaaatttcccttactaatttttg 6789  T

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Target: scaffold0062 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 196 - 336
Target Start/End: Complemental strand, 44057 - 43917
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaga 295  Q
    |||||| ||| ||||| |||||||| |||||||||| ||||  ||||| || ||||||||||||||||| |||||||||||||||| | |||||||||||    
T  44057 acactactagaaaaagaaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaataacggaattaga 43958  T
Q  296 aagggatttcatgttttccctcactaaatttccctcactaa 336  Q
     | | |||| | ||||||||||||||||||| |||||||||    
T  43957 gaagaattttacgttttccctcactaaattttcctcactaa 43917  T

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Target: scaffold0019 (Bit Score: 68; Significance: 7e-30; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 173584 - 173439
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaa--ttccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||||| |||||||||||||| |||| ||||| ||||| ||||| || ||||| |||| |||  ||| |||||||||||||||||||||||||||||    
T  173584 cactattagaaaaagcaaaattagcgagg-aaattagtgacggaaaaaatgaaatttctcataaaaattctttggtcgcaaaatttagtgacggaattag 173486  T
Q  295 aaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    | || ||||| ||||||||||||||||||| ||| ||||||| ||||    
T  173485 agagtgattttatgttttccctcactaaatatccatcactaattttt 173439  T

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Target: scaffold0019; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 139006 - 138939
Alignment:
Q  369 tttagaccaattgcaatggccaattttaaattcaaaaccatctccaagatcatagcagacatgttagc 436  Q
    ||||||||||||||||||||||| || |||||||||  ||| || |||||||| || |||| ||||||    
T  139006 tttagaccaattgcaatggccaaattcaaattcaaagtcatttcaaagatcattgctgacaggttagc 138939  T

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Target: scaffold0184 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 207 - 341
Target Start/End: Complemental strand, 7585 - 7451
Alignment:
Q  207 aaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttca 306  Q
    ||||| |||||||  |||| ||||| ||||| ||||| || |||||| ||||||| ||||| |||||||| ||||||||| |||||||| ||||||||||    
T  7585 aaaagtaaaattaacgaggaaaattagtgacggaaaaaatgaaattcttcacaaaatccttagtcgcaaagtttagtgacagaattagagagggatttca 7486  T
Q  307 tgttttccctcactaaatttccctcactaactttt 341  Q
     ||||||||||||||||||||||||| ||| ||||    
T  7485 cgttttccctcactaaatttccctcattaattttt 7451  T

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Target: scaffold0035 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 74731 - 74863
Alignment:
Q  211 gcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatg-t 309  Q
    ||||||||||  ||||||||| ||||| ||||| || ||||| |||||||||||  |||||| ||||||||||||| |||||||| |||||||||||| |    
T  74731 gcaaaattagcaagggaaattagtgacggaaaaaatgaaatttctcacaaattctctggtcgtaaaatttagtgacagaattagagagggatttcatgtt 74830  T
Q  310 tttccctcactaaatttccctcactaacttttg 342  Q
    ||||||||||||||| ||| ||||||| |||||    
T  74831 tttccctcactaaatatccttcactaatttttg 74863  T

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Target: scaffold0039 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 366 - 616
Target Start/End: Complemental strand, 42011 - 41761
Alignment:
Q  366 cagtttagaccaattgcaatggccaattttaaattcaaaaccatctccaagatcatagcagacatgttagctcaattaatgcctactttaatttctaaag 465  Q
    ||||| || |||||| | ||||||||||||||||| ||||  |||||||||||  ||||||| |  ||||||||| | ||||||   ||||| ||||||     
T  42011 cagttcaggccaatttctatggccaattttaaatttaaaattatctccaagattttagcagatagattagctcaaatcatgcctgagttaatctctaaac 41912  T
Q  466 agcaaagaggtttcattcatggtaggaatataaaggattgcattcttatagcttcagaagctattaatttgcttgatgcaaagtcatttggtggcaacat 565  Q
    | |||||||| || ||||| || || || || || ||||| |||||||||||||| ||||| ||||| || || ||| ||||||| ||||| || ||  |    
T  41911 aacaaagaggatttattcagggcagaaacatcaatgattgtattcttatagcttctgaagccattaacttactggatacaaagtcctttggggggaatgt 41812  T
Q  566 agctttggaagtggatatagccaaagcctttgatacattagaatggagttt 616  Q
     ||| || ||||||| |||||||||||||||||||| || || ||||||||    
T  41811 tgctctgaaagtggacatagccaaagcctttgatactttggagtggagttt 41761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 195 - 322
Target Start/End: Complemental strand, 440104 - 439977
Alignment:
Q  195 cacactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattag 294  Q
    ||||||| ||| ||||| ||||||||  ||| | ||| ||||| ||||| || |||||||||||||||| |||| |||||||||||||||||||||||||    
T  440104 cacactactagaaaaagtaaaattagcaaggaatattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattag 440005  T
Q  295 aaagggatttcatgttttccctcactaa 322  Q
    | |||||||| |  ||||||||||||||    
T  440004 agagggattttacattttccctcactaa 439977  T

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Target: scaffold0011 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 17617 - 17705
Alignment:
Q  197 cactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtga 285  Q
    ||||| ||| |||| ||||||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||||||    
T  17617 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaactttagtga 17705  T

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Target: scaffold0284 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 1549 - 1644
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||| ||||| ||||||| ||||| ||||||||||||||||||||||||| ||  ||||||| |||| ||||||||| |||||||||||    
T  1549 aaattagtgacggaaaaaataaaatccctcataaattccttggtcgcaaaatttagtaacataattagagaggggtttcatgttatccctcactaa 1644  T

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Target: scaffold0114 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 36411 - 36316
Alignment:
Q  227 aaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    ||||| ||||| ||||| ||||||| | ||| ||||||||||||| ||||||||||| ||  ||||||| || ||||||||||| |||||||||||    
T  36411 aaattagtgacggaaaaaataaaatccatcataaattccttggtcacaaaatttagtaacataattagagagagatttcatgttatccctcactaa 36316  T

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Target: scaffold0211 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 19175 - 19263
Alignment:
Q  234 tgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaa 322  Q
    |||| ||||| |||||||  |||| || || ||||||||||||||||||  ||  ||||||| |||||||||||||| |||||||||||    
T  19175 tgacggaaaaaataaaatctctcataattttcttggtcgcaaaatttagaaacataattagagagggatttcatgttatccctcactaa 19263  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 341
Target Start/End: Complemental strand, 112399 - 112323
Alignment:
Q  265 cttggtcgcaaaatttagtgacggaattagaaagggatttcatgttttccctcactaaatttccctcactaactttt 341  Q
    |||||| |||||||||| ||||||||||||| |||||||| | ||||| |||| || ||||| ||||||||| ||||    
T  112399 cttggttgcaaaatttaatgacggaattagagagggatttaacgtttttcctctctgaattttcctcactaattttt 112323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 22228 - 22145
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaattta 281  Q
    ||||||||||||| |||||| ||||||||||||| ||||  ||||| |||||||| |||| |||||  ||| ||||||| ||||    
T  22228 actattaggaaaaacaaaatcagggagggaaattagtgagggaaaaaataaaatttctcataaattttttgatcgcaaacttta 22145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 285
Target Start/End: Complemental strand, 34284 - 34197
Alignment:
Q  198 actattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattccttggtcgcaaaatttagtga 285  Q
    |||||||||||||||||||| | |||| ||||||  |||  ||||| |||||||| ||||||||||  ||||||| ||| ||||||||    
T  34284 actattaggaaaagcaaaatcaaggagcgaaattaatgagggaaaaaataaaatttctcacaaatttattggtcgtaaactttagtga 34197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 9950 - 9881
Alignment:
Q  196 acactattaggaaaagcaaaattagggagggaaatttgtgacagaaaacataaaattcctcacaaattcc 265  Q
    |||||| ||| |||||||||||||| ||| |||||| ||||  ||||| || ||||| ||||||||||||    
T  9950 acactactagaaaaagcaaaattagcgagtgaaattagtgaaggaaaaaatgaaatttctcacaaattcc 9881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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