View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3854_low_9 (Length: 248)

Name: NF3854_low_9
Description: NF3854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3854_low_9
NF3854_low_9
[»] chr6 (33 HSPs)
chr6 (7-230)||(31000189-31000412)
chr6 (1-230)||(24890491-24890720)
chr6 (7-230)||(24886772-24886995)
chr6 (7-206)||(24264003-24264202)
chr6 (7-206)||(24272198-24272397)
chr6 (7-206)||(29348849-29349048)
chr6 (7-206)||(29897631-29897825)
chr6 (7-206)||(29834764-29834963)
chr6 (7-206)||(29866198-29866397)
chr6 (7-206)||(29881984-29882183)
chr6 (7-206)||(29909140-29909339)
chr6 (7-206)||(29889069-29889268)
chr6 (7-206)||(29358230-29358429)
chr6 (9-196)||(29902815-29903002)
chr6 (7-206)||(29073312-29073511)
chr6 (7-206)||(29105885-29106084)
chr6 (7-206)||(29115810-29116009)
chr6 (7-206)||(29886846-29887045)
chr6 (7-230)||(29894078-29894301)
chr6 (7-206)||(29928822-29929021)
chr6 (7-206)||(29098892-29099091)
chr6 (7-206)||(29084567-29084766)
chr6 (7-206)||(29366672-29366871)
chr6 (111-230)||(29211433-29211552)
chr6 (58-204)||(25450459-25450605)
chr6 (150-206)||(24711687-24711743)
chr6 (7-204)||(24730406-24730603)
chr6 (118-206)||(28927344-28927432)
chr6 (156-206)||(29905202-29905252)
chr6 (7-39)||(29905355-29905387)
chr6 (7-46)||(28926798-28926837)
chr6 (7-36)||(29876544-29876573)
chr6 (105-189)||(30154066-30154150)
[»] scaffold0237 (1 HSPs)
scaffold0237 (7-206)||(21892-22091)
[»] chr3 (2 HSPs)
chr3 (7-204)||(24219486-24219683)
chr3 (57-162)||(16350643-16350748)
[»] chr2 (1 HSPs)
chr2 (7-206)||(15063127-15063326)
[»] scaffold0054 (2 HSPs)
scaffold0054 (39-206)||(53984-54151)
scaffold0054 (7-136)||(53847-53976)
[»] chr1 (1 HSPs)
chr1 (7-204)||(10129688-10129885)
[»] scaffold0654 (1 HSPs)
scaffold0654 (57-162)||(1521-1626)
[»] scaffold0051 (1 HSPs)
scaffold0051 (59-162)||(43590-43693)
[»] scaffold0573 (1 HSPs)
scaffold0573 (7-46)||(3846-3885)
[»] scaffold0429 (1 HSPs)
scaffold0429 (57-162)||(5789-5894)
[»] scaffold0308 (1 HSPs)
scaffold0308 (59-196)||(8554-8691)
[»] scaffold0019 (1 HSPs)
scaffold0019 (57-162)||(126424-126529)
[»] scaffold0014 (1 HSPs)
scaffold0014 (105-162)||(105087-105144)


Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 31000189 - 31000412
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  31000189 aatatccatccattaaagagctataagtaacaacacgaggctttatgtcgtctttgatcatcatggctaatacatttttagcttctttcaccctaccatc 31000288  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31000289 cttacaaaaaccatcaaccagtatattaaaggtatacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 31000388  T
Q  207 gaaacagtgggaaaaccactaatt 230  Q
    |||||||  | |||||||||||||    
T  31000389 gaaacagcagaaaaaccactaatt 31000412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 24890491 - 24890720
Alignment:
Q  1 tcgaataatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccct 100  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || ||||| ||   |||| | || |||||| |    
T  24890491 tcgaacaatatccatccattaaagagttataagtaacaacatcaggttttatgtcgtctttcatcattatagctaacactactttagcatcattcacctt 24890590  T
Q  101 accatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattc 200  Q
     || ||||| ||||| ||||||||||||||||||||||| |||||||  |||||||||||||||  | ||||||||||||||||| |||||||||  |||    
T  24890591 tccttccttacaaaagccatcaaccagtatattaaaggtatacacatttgggttgatgttttcctttttcattttattgaacaaatcaattgcatagttc 24890690  T
Q  201 aatttagaaacagtgggaaaaccactaatt 230  Q
    ||||||||||||| || |||||||||||||    
T  24890691 aatttagaaacagcggaaaaaccactaatt 24890720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 24886772 - 24886995
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||| |||||||| ||||||||| |||||| |||| || ||| ||| |||||||||||| | ||| |||| |||| |||||||||||||||| ||    
T  24886772 aatatccattcattaaagtgttataagtgacaacactaggtttgatgccgtgtttcatcatcatagataacacatatttagcttctttcaccctaccttc 24886871  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| |||||| ||||||||  |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  24886872 cttacaaaaagcatcaaccgatatattaaaggtatacacatccgggttgatattttccgctgtcattttattgaacaacccaattgtatcattcaattta 24886971  T
Q  207 gaaacagtgggaaaaccactaatt 230  Q
      |||| ||  |||||||||||||    
T  24886972 ccaacaatgcaaaaaccactaatt 24886995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 24264003 - 24264202
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||||||||||||||||  | ||| || ||| | | |||||||||||| |||||  |||||||| ||||||||||||| || ||    
T  24264003 aatatccatccattaaagagttataagtaacaatgtcaggtttaatgccttgtttcatcatcatagctaacccatttttagcttctttcacccttccttc 24264102  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| |||||  ||||||||| ||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  24264103 cttacaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgttttccgatgtcattttattgaacaaaccaattgcatctttcaattta 24264202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 24272198 - 24272397
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||| ||||||||||||||||||||||||||| | ||| || ||| | | |||||||||||| |||||  |||||||| ||||||||||||| || ||    
T  24272198 aatatcgatccattaaagagttataagtaacaacgtcaggtttaatgccttgtttcatcatcatagctaacccatttttagcttctttcacccttccttc 24272297  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| |||||  ||||||||| ||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  24272298 cttacaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgttttccgatgtcattttattgaacaaaccaattgcatctttcaattta 24272397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 29348849 - 29349048
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||||||||||||||  |||||||||||||| ||| || ||| | | |||||||||||| ||||| ||||||||| ||||||||||||| || ||    
T  29348849 aatatccatccattaaagagcaataagtaacaacatcaggtttaatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttc 29348948  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| |||| ||||||| |||||||| |||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||    
T  29348949 cttacaaaatccatcaaccaatatactaaaggtatacacatcagggttgatttcttccgatatcattttattgaacaaaccaattgcatcattcaattta 29349048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29897825 - 29897631
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||||||||||||| ||||||||| || ||||| | |||||||||||| || || ||||||||| |||||||||||||    ||    
T  29897825 aatatccatccattaaagagttataagtaaaaacattaggtttaatgtcttgtttcatcatcatagcaaacacatttttagcttctttcaccct----tc 29897730  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| |||| ||||||| |||||||||||| ||||||||| |  | |||||||||||||||||||||||||||| |||||||||    
T  29897729 cttacaaaatccatcaacca-tatactaaaggtatacacatccgggatgatgtttttcaatatcattttattgaacaaaccaattgcatctttcaattta 29897631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29834963 - 29834764
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||| | |||||||||||||||| || || ||| | | |||||||||||| ||||| ||||||||| |||||||||   | || ||    
T  29834963 aatatccatccattaaagcgctataagtaacaacattgggtttcatgccttgtttcatcatcatagctaacacatttttagcttctttcatttttccttc 29834864  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| |||||  ||||||||| |||||||||||| |||| ||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  29834863 cttacaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgttttccaatgtcattttattgaacaaaccaattgcatctttcaattta 29834764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29866397 - 29866198
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||| | |||||||||||||||| || || ||| | | |||||||||||| ||||| ||||||||| |||||||||   | || ||    
T  29866397 aatatccatccattaaagcgctataagtaacaacattgggtttcatgccttgtttcatcatcatagctaacacatttttagcttctttcatttttccttc 29866298  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| |||||  ||||||||| |||||||||||| |||| ||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  29866297 cttacaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgttttccaatgtcattttattgaacaaaccaattgcatctttcaattta 29866198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29882183 - 29881984
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||| | ||||||||||||| ||| || ||| | | |||||||||||| ||||| ||||||||| ||||||||||||| || ||    
T  29882183 aatatccatccattaaagagctgtaagtaacaacatcaggtttaatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttc 29882084  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| |||| ||||||| ||||||| ||| ||||||||||||  | |||||||||| |||||| |||||||||| |||||||||    
T  29882083 cttacaaaatccatcaaccaatatactaaaggtatacacattcggattgatgttttccaatatcattttattaaacaaatcaattgcatctttcaattta 29881984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29909339 - 29909140
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||| | ||||||||||||| ||| || ||| | | |||||||||||| ||||| ||||||||| ||||||||||||| || ||    
T  29909339 aatatccatccattaaagagctgtaagtaacaacatcaggtttaatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttc 29909240  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| |||| ||||||| ||||||| ||| ||||||||||||  | |||||||||| |||||| |||||||||| |||||||||    
T  29909239 cttacaaaatccatcaaccaatatactaaaggtatacacattcggattgatgttttccaatatcattttattaaacaaatcaattgcatctttcaattta 29909140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29889268 - 29889069
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||||||||||||||||||||| | || |||||   |||||||||||| ||||| ||||||||| ||||||||||||| || ||    
T  29889268 aatatccatccattaaagagttataagtaacaacattaagtttgatgtctcgtttcatcatcatagctaacacatttttagcttctttcacccttccttc 29889169  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| ||| |||||||| ||||||| ||| ||||||||||||  | |||||||||| ||  || |||||||||| |||| ||||    
T  29889168 cttacaaaatccatcaaccattatgttaaaggtatacacattcggattgatgttttccaatatcattttattaaaacaatcaattgcatctttcatttta 29889069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 29358230 - 29358429
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||||||||||||||||||||||||||||   ||| || ||| | | | |||||||||| ||||| ||||||||| ||||||||||||| || ||    
T  29358230 aatatccatccattaaagagttataagtaacaacgccaggtttaatgccttgtatcatcatcatagctaacacatttttagcttctttcacccttccttc 29358329  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||| | |||| ||||||| ||||||||||||||||||||||||  | |||||||||| |||| | ||| |||||| |||| ||||    
T  29358330 cttacaaaatccatcaactaatatagtaaaggtatacacatccgggttgatgttttccaatatcattttattaaacagatcaactgcatctttcagttta 29358429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 29903002 - 29902815
Alignment:
Q  9 tatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatcct 108  Q
    |||||||||||||||||||||||||||||||| | ||| || ||| | | |||||||||||| ||||| ||||||||| ||||||||||||| || ||||    
T  29903002 tatccatccattaaagagttataagtaacaacgtcaggtttgatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttcct 29902903  T
Q  109 tgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatc 196  Q
    | |||||||||||||||| |||| |||| || |||||||  ||||||||||||||   | |||||||||| || ||| ||||||||||    
T  29902902 tacaaaaaccatcaaccaatatagtaaaagtatacacatttgggttgatgttttcgaatatcattttattaaagaaatcaattgcatc 29902815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29073511 - 29073312
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||||||||||||||  |||||||||||||||||| || ||| | | |||||||||||| || || ||| ||||| ||||||||| | | || ||    
T  29073511 aatatccatccattaaagagcaataagtaacaacattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgtc 29073412  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| ||||||||| || ||||||||||| ||||||||||||  | |||||||||| |||| | |||||||||| |||| ||||    
T  29073411 cttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttta 29073312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29106084 - 29105885
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||||||||||||||  |||||||||||||||||| || ||| | | |||||||||||| || || ||| ||||| ||||||||| | | || ||    
T  29106084 aatatccatccattaaagagcaataagtaacaacattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgtc 29105985  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| ||||||||| || ||||||||||| ||||||||||||  | |||||||||| |||| | |||||||||| |||| ||||    
T  29105984 cttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttta 29105885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29116009 - 29115810
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||||||||||||||||||||||||||| |||||| || ||| | | ||||||||||||  | || ||| ||||| ||||||||| | | || ||    
T  29116009 aatatccatccattaaagagttataagtaacaaaattaggtttgatgccttgtttcatcatcatatcaaacacagttttaccttctttcatctttccgtc 29115910  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| |||||  ||| ||||| ||||||||| || ||||||||||| ||||||||||||  | |||||||||| |||| | ||||||||||||||| ||||    
T  29115909 cttacaaaatgcattaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatcattcagttta 29115810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29887045 - 29886846
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||| ||||||||||| ||||||| || ||| | | |||||||||||| ||||| ||||||||| | ||||| ||  | || ||    
T  29887045 aatatccatccattaaagagctataagtaacagcattaggattgatgccttgtttcatcatcatagctaacacatttttagcctcttttacgtttccttc 29886946  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| |||||  ||||||||| ||||||||| || ||||||   ||||||||||||| || ||||||||||||||| ||| || ||||||| |||||||||    
T  29886945 cttacaaaatgcatcaaccaatatattaaaagtatacacagttgggttgatgtttttcgatgtcattttattgaataaatcagttgcatctttcaattta 29886846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 230
Target Start/End: Complemental strand, 29894301 - 29894078
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||||||||||||||  ||| |||||||||||||| || ||| | | |||||||||||| || || ||| ||||| ||||||||| | | || ||    
T  29894301 aatatccatccattaaagagcaataggtaacaacattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttccgtc 29894202  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| ||||||||| || ||||||||||| ||||||||||||  | |||||||||| |||| | |||||||||| |||| || |    
T  29894201 cttacaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttga 29894102  T
Q  207 gaaacagtgggaaaaccactaatt 230  Q
      |||||||  ||| |||||||||    
T  29894101 ccaacagtgaaaaacccactaatt 29894078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29929021 - 29928822
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||| | ||||||||||||| ||| || ||| | | |||||||||||| ||||| ||||||||| ||||||||||||| || ||    
T  29929021 aatatccatccattaaagagctgtaagtaacaacatcaggtttaatgccttgtttcatcatcatagctaacacatttttagcttctttcacccttccttc 29928922  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| |||| ||||||| |||| || |||  ||||||||| |  | |||||||||| || ||| ||| |||||| |||||||||    
T  29928921 cttacaaaatccatcaaccaatatactaaaggtatacaaatacggaatgatgttttacaatatcattttattaaaaaaatcaaatgcatctttcaattta 29928822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29099091 - 29098892
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||||||||||||||||||||||||||| |||||| || ||| | | ||||||||||||  | || ||| ||||| ||||||||| | | || ||    
T  29099091 aatatccatccattaaagagttataagtaacaaaattaggtttgatgccttgtttcatcatcatatcaaacacagttttaccttctttcatctttccgtc 29098992  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| |||||  ||| ||||| ||||||||| || ||||||||||| ||||||||||||  | |||||||||| |||| | |||||||||| |||| ||||    
T  29098991 cttacaaaatgcattaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttta 29098892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 29084766 - 29084567
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||||||||||||||||||| |||  | ||| | | |||||||||||| || || ||| ||||| ||||||||| | | |  ||    
T  29084766 aatatccatccattaaagagttataagtaacaacatcaggtatgatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttctgtc 29084667  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| ||||||||| || ||| ||||||| ||||||||||||  | | |||||||| |||| | |||||||||| |||| ||||    
T  29084666 cttacaaaatccatcaaccaatatattaaaagtatacccatccggtttgatgttttccaatattattttattaaacagatcaattgcatctttcagttta 29084567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 29366672 - 29366871
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||| ||||||||||||||||||||||| ||| | ||| || ||| | | |||||||||||| ||||  ||||||||| ||||||||| ||| |  ||    
T  29366672 aatatctatccattaaagagttataagtaaaaacgtcaggtttaatgccttgtttcatcatcatagctagcacatttttagcttctttcaaccttctttc 29366771  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| ||| ||||| || |||||||  ||||||||||||||   | |||||||||| |||||| || ||||||| |||| ||||    
T  29366772 cttacaaaatccatcaaccaatatgttaaaagtatacacatttgggttgatgttttcgaatatcattttattaaacaaatcagttgcatctttcatttta 29366871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 29211433 - 29211552
Alignment:
Q  111 caaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaa 210  Q
    |||||| ||||||||| ||||||||| || ||||||||||| ||||||||||||| | |||||||||| |||| | ||| |||||| |||| ||||  ||    
T  29211433 caaaaaacatcaaccaatatattaaaagtatacacatccggtttgatgttttccgatatcattttattaaacagatcaactgcatctttcagtttaccaa 29211532  T
Q  211 cagtgggaaaaccactaatt 230  Q
    |||||  ||| |||||||||    
T  29211533 cagtgaaaaacccactaatt 29211552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 25450605 - 25450459
Alignment:
Q  58 ctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgat 157  Q
    |||||||||||| |||||| ||   |||| | ||||||||| | || ||||| ||||| |||||||||| |||||| ||||| ||||||   ||||||||    
T  25450605 ctttcatcatcacggctaacactactttagcatctttcacctttccttccttacaaaatccatcaaccaatatattgaaggtatacacagttgggttgat 25450506  T
Q  158 gttttccgctgtcattttattgaacaaaccaattgcatcattcaatt 204  Q
    |||||||| |  |||| | || ||||||| ||||||||| |||||||    
T  25450505 gttttccgataccattatcttaaacaaactaattgcatctttcaatt 25450459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 24711743 - 24711687
Alignment:
Q  150 gggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||||||||||| || |||||||||||||||||||| | |||||||||||||||||||    
T  24711743 gggttgatgttgtctgctgtcattttattgaacaaccaaattgcatcattcaattta 24711687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 204
Target Start/End: Complemental strand, 24730603 - 24730406
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||||||||||||||||||| | |  | ||||| | ||||||| |||   |||| |   ||||| ||||||||||| | || ||    
T  24730603 aatatccatccattaaagagttataagtaacaacatcaagtataatgtcttttttcatcgtcacacctaacatcattttagcttctttcacctttccttc 24730504  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatt 204  Q
    ||| |||||| ||||||||| |||  |||| || |||| |   ||||||||||||||   | ||||||| |  |||||||||| ||| || |||||||    
T  24730503 cttacaaaaagcatcaaccaatatgctaaatgtatacatacgagggttgatgttttctaatatcattttgtgtaacaaaccaactgcctctttcaatt 24730406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 28927344 - 28927432
Alignment:
Q  118 catcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    |||||| || |||||||||||| |||| ||  |||||||| ||||| | | |||||||||  ||||||||||||| |||||||||||||    
T  28927344 catcaatcaatatattaaaggtatacatatttgggttgatcttttctgatatcattttatgaaacaaaccaattgaatcattcaattta 28927432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 29905252 - 29905202
Alignment:
Q  156 atgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    |||||||||  ||||||||||||||| |||||||||||||| |||||||||    
T  29905252 atgttttccaatgtcattttattgaaaaaaccaattgcatctttcaattta 29905202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 29905387 - 29905355
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaa 39  Q
    |||||||||||||||||||||||||||||||||    
T  29905387 aatatccatccattaaagagttataagtaacaa 29905355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 28926798 - 28926837
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattagg 46  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  28926798 aatatccatccattaaagagctataagtaacaacgttagg 28926837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 29876573 - 29876544
Alignment:
Q  7 aatatccatccattaaagagttataagtaa 36  Q
    ||||||||||||||||||||||||||||||    
T  29876573 aatatccatccattaaagagttataagtaa 29876544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 30154150 - 30154066
Alignment:
Q  105 tccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaa 189  Q
    ||||| || ||||||||||||| |||||| ||||| |||||||  |||||| ||||||    | |||||| ||||||||||||||    
T  30154150 tccttacataaaccatcaaccaatatattgaaggtatacacattggggttggtgtttttgagtatcatttcattgaacaaaccaa 30154066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 22091 - 21892
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||| | ||||||||||||| ||| || |||   | |||||||||||| ||||| ||||||||| | ||||| |   | || ||    
T  22091 aatatccatccattaaagagctgtaagtaacaacatcaggtttaatgctttgtttcatcatcatagctaacacatttttagcctcttttatgtttccgtc 21992  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||| |||||||||| |||| ||||||| |||||||| ||| ||||||||| || ||||||||||||||| ||| |||||||||| |||||||||    
T  21991 cttacaaaatccatcaaccaatatactaaaggtatacacatctgggatgatgtttttcgatgtcattttattgaataaatcaattgcatctttcaattta 21892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 204
Target Start/End: Original strand, 24219486 - 24219683
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||| |||||||||||||||||||||||  ||||| ||||  || | |||||||||||   | || ||||||||| ||||||||||  | || ||    
T  24219486 aatatccattcattaaagagttataagtaacaatgttaggttttacatcttttttcatcatcacaacaaacacatttttagcttctttcacttttccttc 24219585  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatt 204  Q
    ||| |||||  ||||||||| |||| ||||||| ||||||   |||||||||||||||  | |||||||||  ||||||||||||||||| |||||||    
T  24219586 cttacaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaatt 24219683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 16350748 - 16350643
Alignment:
Q  57 tctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttga 156  Q
    |||||||||||||  ||||  ||||||||| ||||||| | | | || ||||| |||| | ||||||||| ||||||||| || ||  |||| |||||||    
T  16350748 tctttcatcatcacagctatcacatttttagcttctttgatctttccttccttacaaagagcatcaaccaatatattaaaagtataagcatctgggttga 16350649  T
Q  157 tgtttt 162  Q
    ||||||    
T  16350648 tgtttt 16350643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 15063127 - 15063326
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||||||||||||||||||||||||||||| | | |||| ||  | |||||||||||  ||||| ||||||||| ||||| ||||| | || ||    
T  15063127 aatatccatccattaaagagttataagtaacaacatcaagttttacgttttttttcatcatcacagctaacacatttttagcttctctcacctttccttc 15063226  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    ||| ||||||||||||| || |||| |||| || ||||||| ||| || ||||| |||| | ||||| |||| |||||| |||  ||||  |||||||||    
T  15063227 cttacaaaaaccatcaatcaatatactaaaagtatacacattcggattaatgttgtccgatatcattctattaaacaaatcaacagcatatttcaattta 15063326  T

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Target: scaffold0054 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 206
Target Start/End: Original strand, 53984 - 54151
Alignment:
Q  39 acattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaagg 138  Q
    |||||||| || ||||| | | ||||||||||  |||| ||||||||| ||| ||||| ||| || ||||| ||||| |||||||| | |||||||||||    
T  53984 acattaggtttaatgtcttgtatcatcatcatatctaacacatttttagcttttttcagccttccttccttacaaaatccatcaactaatatattaaagg 54083  T
Q  139 tgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaattta 206  Q
    | ||||||||||| ||||||||||||  | |||||||||| |||| | |||||||||| |||| ||||    
T  54084 tatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttta 54151  T

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Target: scaffold0054; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 53847 - 53976
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    ||||||||||||||||||||  |||||||||||||||||| || ||| | | |||||||||||| || || ||| ||||| ||||||||| | | |  ||    
T  53847 aatatccatccattaaagagcaataagtaacaacattaggtttaatgccttgtttcatcatcatagcaaacacagttttaccttctttcatctttctgtc 53946  T
Q  107 cttgcaaaaaccatcaaccagtatattaaa 136  Q
    ||| ||||| |||||||||| | |||||||    
T  53947 cttacaaaatccatcaaccaatgtattaaa 53976  T

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Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 204
Target Start/End: Complemental strand, 10129885 - 10129688
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattaggctttatgtcgtctttcatcatcatggctaatacatttttatcttctttcaccctaccatc 106  Q
    |||||||||| |||||||| |||||||||||||| ||||| |||| | ||| ||||||||  | ||| |  ||   |||| ||||||||    | |||||    
T  10129885 aatatccatctattaaagaattataagtaacaacgttaggttttacgccgtttttcatcaaaacggcaaccactgctttagcttctttcggttttccatc 10129786  T
Q  107 cttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatt 204  Q
    ||| |||||| ||||||||| |||| | | ||| || ||||  ||||| |||||||||  | |||||||||  ||||||||||||||||| |||||||    
T  10129785 cttacaaaaagcatcaaccaatatactcatggtataaacatttgggttaatgttttccaatatcattttatgcaacaaaccaattgcatctttcaatt 10129688  T

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Target: scaffold0654 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 1521 - 1626
Alignment:
Q  57 tctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttga 156  Q
    |||||||||||||| ||||  ||||||||| ||||||||    | || ||||| |||||| |||| |||| ||||||||| || |||||||| |||||||    
T  1521 tctttcatcatcatagctatcacatttttagcttctttcgtgtttccttccttacaaaaagcatcgaccaatatattaaaagtatacacatcagggttga 1620  T
Q  157 tgtttt 162  Q
    ||||||    
T  1621 tgtttt 1626  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 43590 - 43693
Alignment:
Q  59 tttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatg 158  Q
    |||||||||||||||||| | ||| ||| || |||||||  | || ||||| |||| | ||||||||| ||||||||| || |||||||  |||||||||    
T  43590 tttcatcatcatggctaacagattcttagctcctttcacatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggttgatg 43689  T
Q  159 tttt 162  Q
    ||||    
T  43690 tttt 43693  T

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Target: scaffold0573 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 3885 - 3846
Alignment:
Q  7 aatatccatccattaaagagttataagtaacaacattagg 46  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  3885 aatatccatccattaaagagctataagtaacaacgttagg 3846  T

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Target: scaffold0429 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 5894 - 5789
Alignment:
Q  57 tctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttga 156  Q
    ||||||||||||| |||||| | ||| ||| || ||||||   | || ||||| |||| | ||||||||| ||||||||| || |||||||  |||||||    
T  5894 tctttcatcatcacggctaacagattcttagctcctttcagatttccttccttacaaagagcatcaaccaatatattaaaagtatacacatttgggttga 5795  T
Q  157 tgtttt 162  Q
    ||||||    
T  5794 tgtttt 5789  T

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Target: scaffold0308 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 8691 - 8554
Alignment:
Q  59 tttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatg 158  Q
    ||||| |||||| ||||| ||||||||| |||||||||   | || ||||| || | | ||||||||| ||||||||| || || ||||  |||||||||    
T  8691 tttcaccatcatagctaacacatttttagcttctttcatttttccttccttacagagagcatcaaccaatatattaaaagtataaacatttgggttgatg 8592  T
Q  159 ttttccgctgtcattttattgaacaaaccaattgcatc 196  Q
    |||| |  |  ||||| ||||||||||| || ||||||    
T  8591 tttttcaataccatttcattgaacaaacgaaatgcatc 8554  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 126424 - 126529
Alignment:
Q  57 tctttcatcatcatggctaatacatttttatcttctttcaccctaccatccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttga 156  Q
    |||||||||||||  ||||  ||| ||||| ||||||||| | | || ||||| || | | ||||||||| ||||||||| || || ||||| |||||||    
T  126424 tctttcatcatcacagctatcacacttttagcttctttcatctttccttccttacatagagcatcaaccattatattaaaagtataaacatctgggttga 126523  T
Q  157 tgtttt 162  Q
    ||||||    
T  126524 tgtttt 126529  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 105087 - 105144
Alignment:
Q  105 tccttgcaaaaaccatcaaccagtatattaaaggtgtacacatccgggttgatgtttt 162  Q
    ||||| |||| | ||||||||| ||||||||| || |||||||| |||||||||||||    
T  105087 tccttacaaagagcatcaaccaatatattaaaagtatacacatctgggttgatgtttt 105144  T

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