View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3856_high_32 (Length: 369)
Name: NF3856_high_32
Description: NF3856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3856_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 43567380 - 43567543
Alignment:
| Q |
127 |
gaaagtacgaaatttattaataacaatgtcctagcacatgatgaaaagaggtcgacaagactaaaacaacatacaaatggcgtcatatatatgcggaaca |
226 |
Q |
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| T |
43567380 |
gaaaggacaaaatttattaataacaatgtccttgcacatgatgaaaagaggtcgacaagactaaaacaacatacaaatggcgtcatatatatgcggaaca |
43567479 |
T |
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| Q |
227 |
taaagaaaattcatatttctcatacatcaaaccctcaataaagacatcaaccaactgagtccac |
290 |
Q |
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| T |
43567480 |
taaagaaaattcatacttatcgtacatcaaacccttaataaagacatcaaccaactgagtccac |
43567543 |
T |
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