View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3856_high_58 (Length: 257)

Name: NF3856_high_58
Description: NF3856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3856_high_58
NF3856_high_58
[»] chr5 (35 HSPs)
chr5 (2-253)||(36936742-36936993)
chr5 (2-253)||(36941496-36941747)
chr5 (2-249)||(41997276-41997523)
chr5 (2-249)||(42002045-42002292)
chr5 (2-253)||(557308-557558)
chr5 (2-253)||(562080-562330)
chr5 (2-252)||(32460781-32461026)
chr5 (2-219)||(23976851-23977069)
chr5 (2-250)||(31732149-31732395)
chr5 (2-250)||(13300725-13300972)
chr5 (2-248)||(12044368-12044617)
chr5 (5-252)||(21826838-21827079)
chr5 (2-132)||(21323328-21323458)
chr5 (5-181)||(36949400-36949575)
chr5 (112-248)||(1429412-1429547)
chr5 (2-196)||(26869612-26869796)
chr5 (2-196)||(8770855-8771049)
chr5 (13-179)||(3666536-3666702)
chr5 (5-252)||(24435413-24435662)
chr5 (164-250)||(21323254-21323340)
chr5 (41-182)||(15395139-15395283)
chr5 (2-92)||(10754062-10754152)
chr5 (126-252)||(41099278-41099404)
chr5 (38-196)||(41099178-41099326)
chr5 (147-196)||(41099407-41099456)
chr5 (126-252)||(41099408-41099534)
chr5 (110-200)||(10755460-10755549)
chr5 (147-196)||(26869480-26869529)
chr5 (209-252)||(3666692-3666735)
chr5 (197-252)||(8771070-8771125)
chr5 (164-252)||(21827119-21827211)
chr5 (147-196)||(21827082-21827131)
chr5 (193-252)||(26869532-26869593)
chr5 (209-249)||(15395090-15395130)
chr5 (206-248)||(23976802-23976844)
[»] chr3 (64 HSPs)
chr3 (2-253)||(3034255-3034506)
chr3 (2-253)||(8070291-8070542)
chr3 (2-253)||(8888542-8888793)
chr3 (2-253)||(3693230-3693482)
chr3 (2-253)||(3673198-3673450)
chr3 (2-253)||(8883782-8884033)
chr3 (2-250)||(10585426-10585672)
chr3 (9-250)||(45903779-45904020)
chr3 (2-242)||(22758423-22758662)
chr3 (2-181)||(6595697-6595875)
chr3 (38-249)||(53358754-53358964)
chr3 (34-250)||(12898983-12899193)
chr3 (2-200)||(16749205-16749402)
chr3 (2-200)||(19776497-19776694)
chr3 (5-196)||(14425141-14425322)
chr3 (43-248)||(16048646-16048852)
chr3 (2-180)||(9706896-9707073)
chr3 (148-252)||(18699090-18699194)
chr3 (49-200)||(16023191-16023342)
chr3 (6-200)||(37438845-37439038)
chr3 (43-248)||(16043154-16043359)
chr3 (43-248)||(16055829-16056034)
chr3 (2-196)||(18350073-18350257)
chr3 (5-218)||(51922949-51923152)
chr3 (147-248)||(14424953-14425058)
chr3 (6-200)||(4106620-4106804)
chr3 (6-200)||(4110472-4110656)
chr3 (2-180)||(8488696-8488872)
chr3 (6-200)||(15965671-15965855)
chr3 (6-200)||(15969595-15969779)
chr3 (6-200)||(15973519-15973703)
chr3 (5-196)||(29843-30024)
chr3 (126-252)||(29976-30102)
chr3 (126-252)||(30106-30232)
chr3 (2-196)||(8223547-8223731)
chr3 (126-252)||(8223683-8223809)
chr3 (126-252)||(18349995-18350121)
chr3 (126-249)||(18349868-18349991)
chr3 (126-252)||(51923082-51923208)
chr3 (108-181)||(53502439-53502512)
chr3 (126-250)||(8223813-8223937)
chr3 (22-181)||(429061-429220)
chr3 (126-249)||(8197330-8197453)
chr3 (2-196)||(8197064-8197248)
chr3 (126-252)||(8197200-8197326)
chr3 (146-196)||(8197328-8197378)
chr3 (87-180)||(47540795-47540889)
chr3 (147-196)||(8223812-8223861)
chr3 (147-196)||(18349943-18349992)
chr3 (111-179)||(47541213-47541281)
chr3 (77-200)||(14679958-14680080)
chr3 (147-196)||(30105-30154)
chr3 (112-181)||(11997288-11997356)
chr3 (110-178)||(19340221-19340289)
chr3 (19-92)||(35456332-35456404)
chr3 (2-62)||(18699200-18699260)
chr3 (193-252)||(14425061-14425122)
chr3 (80-176)||(55203920-55204015)
chr3 (87-174)||(18012065-18012152)
chr3 (18-92)||(18011968-18012042)
chr3 (87-181)||(35456221-35456314)
chr3 (40-105)||(47540898-47540963)
chr3 (110-178)||(20497784-20497851)
chr3 (204-248)||(53502390-53502434)
[»] chr8 (37 HSPs)
chr8 (2-253)||(4237572-4237823)
chr8 (2-253)||(4242311-4242562)
chr8 (1-253)||(31449096-31449348)
chr8 (2-253)||(43301917-43302166)
chr8 (2-250)||(8330599-8330845)
chr8 (2-250)||(34817940-34818188)
chr8 (2-250)||(25367221-25367468)
chr8 (2-250)||(37772319-37772564)
chr8 (2-252)||(23915104-23915353)
chr8 (2-200)||(21411635-21411832)
chr8 (2-200)||(21806127-21806324)
chr8 (5-196)||(22104290-22104471)
chr8 (2-196)||(19393029-19393213)
chr8 (2-200)||(21384356-21384552)
chr8 (2-200)||(21387776-21387972)
chr8 (110-252)||(25733415-25733556)
chr8 (73-181)||(10933923-10934031)
chr8 (2-196)||(4582593-4582778)
chr8 (50-250)||(17153198-17153395)
chr8 (6-200)||(18861864-18862048)
chr8 (2-196)||(16066515-16066699)
chr8 (50-250)||(17157289-17157486)
chr8 (176-252)||(4582513-4582591)
chr8 (66-181)||(29220759-29220871)
chr8 (193-252)||(19391327-19391386)
chr8 (6-88)||(21827335-21827417)
chr8 (147-196)||(22104554-22104603)
chr8 (126-252)||(22104555-22104683)
chr8 (87-155)||(14036186-14036254)
chr8 (164-252)||(16066442-16066527)
chr8 (147-196)||(19392897-19392946)
chr8 (2-56)||(25733593-25733647)
chr8 (22-92)||(14036087-14036157)
chr8 (110-180)||(21827253-21827322)
chr8 (193-252)||(22104490-22104551)
chr8 (108-157)||(42972857-42972905)
chr8 (202-250)||(14036274-14036322)
[»] chr1 (44 HSPs)
chr1 (6-253)||(3094705-3094952)
chr1 (2-252)||(41097192-41097440)
chr1 (2-252)||(40232625-40232870)
chr1 (5-252)||(17213678-17213923)
chr1 (2-251)||(19725140-19725386)
chr1 (38-251)||(19727013-19727225)
chr1 (44-199)||(8267138-8267292)
chr1 (2-181)||(13893928-13894105)
chr1 (2-252)||(26198970-26199214)
chr1 (4-200)||(41387260-41387455)
chr1 (2-200)||(39243308-39243505)
chr1 (2-200)||(39246863-39247060)
chr1 (40-179)||(27308194-27308332)
chr1 (2-196)||(16836583-16836768)
chr1 (18-250)||(23285074-23285305)
chr1 (5-196)||(22428494-22428674)
chr1 (5-196)||(14819587-14819768)
chr1 (5-196)||(14804119-14804300)
chr1 (6-200)||(1924348-1924532)
chr1 (6-200)||(20923362-20923546)
chr1 (126-246)||(39036929-39037049)
chr1 (2-156)||(1067093-1067246)
chr1 (2-252)||(21498263-21498525)
chr1 (126-252)||(21498529-21498655)
chr1 (2-196)||(2367655-2367839)
chr1 (2-196)||(2384544-2384728)
chr1 (126-248)||(52100321-52100443)
chr1 (5-77)||(33055651-33055723)
chr1 (126-252)||(2367791-2367917)
chr1 (147-196)||(21498528-21498577)
chr1 (147-196)||(52100395-52100444)
chr1 (159-249)||(52100450-52100542)
chr1 (186-250)||(39036786-39036850)
chr1 (120-252)||(26199234-26199368)
chr1 (126-196)||(26199218-26199288)
chr1 (122-252)||(26319456-26319586)
chr1 (5-105)||(52100601-52100700)
chr1 (17-156)||(23254515-23254654)
chr1 (2-73)||(26319584-26319655)
chr1 (193-252)||(14804319-14804380)
chr1 (158-196)||(52100525-52100563)
chr1 (126-252)||(2384464-2384592)
chr1 (147-200)||(26199217-26199272)
chr1 (202-249)||(1067230-1067277)
[»] chr7 (71 HSPs)
chr7 (2-249)||(27256849-27257096)
chr7 (2-252)||(9650192-9650442)
chr7 (2-245)||(8076662-8076906)
chr7 (2-252)||(47102151-47102391)
chr7 (2-252)||(19640911-19641161)
chr7 (2-250)||(40864615-40864845)
chr7 (2-252)||(14927869-14928118)
chr7 (2-252)||(15351335-15351584)
chr7 (2-252)||(16459614-16459863)
chr7 (2-252)||(16580841-16581090)
chr7 (5-252)||(32302454-32302699)
chr7 (2-252)||(14259618-14259858)
chr7 (2-200)||(20488560-20488757)
chr7 (2-196)||(8954565-8954749)
chr7 (2-200)||(20485199-20485396)
chr7 (6-200)||(18426543-18426736)
chr7 (2-196)||(19096866-19097051)
chr7 (5-196)||(29727090-29727283)
chr7 (147-252)||(853115-853222)
chr7 (147-252)||(1211119-1211226)
chr7 (8-180)||(11017387-11017557)
chr7 (6-180)||(45169236-45169409)
chr7 (19-132)||(9008786-9008899)
chr7 (147-252)||(845734-845845)
chr7 (40-182)||(11247701-11247841)
chr7 (2-252)||(845848-846090)
chr7 (2-252)||(853225-853467)
chr7 (2-252)||(1211229-1211471)
chr7 (2-189)||(36477589-36477759)
chr7 (147-252)||(838578-838689)
chr7 (147-252)||(1203758-1203869)
chr7 (148-243)||(40998128-40998224)
chr7 (108-179)||(10488602-10488673)
chr7 (160-252)||(838692-838788)
chr7 (160-252)||(1203872-1203968)
chr7 (50-250)||(11297413-11297610)
chr7 (116-181)||(15565640-15565705)
chr7 (158-250)||(9008903-9008995)
chr7 (109-176)||(7838802-7838868)
chr7 (46-181)||(44784004-44784136)
chr7 (121-199)||(7838857-7838935)
chr7 (126-252)||(19097135-19097261)
chr7 (147-196)||(19097134-19097183)
chr7 (191-252)||(23866651-23866712)
chr7 (44-156)||(1043873-1043985)
chr7 (19-181)||(10499401-10499569)
chr7 (19-181)||(10504430-10504598)
chr7 (117-182)||(11289353-11289418)
chr7 (113-181)||(1043985-1044053)
chr7 (2-105)||(838811-838914)
chr7 (2-105)||(1203991-1204094)
chr7 (108-181)||(10532114-10532186)
chr7 (19-92)||(10532225-10532298)
chr7 (108-181)||(13343710-13343782)
chr7 (193-252)||(8954485-8954546)
chr7 (146-184)||(11247285-11247323)
chr7 (193-252)||(19097070-19097131)
chr7 (160-250)||(40998011-40998103)
chr7 (117-182)||(11265837-11265902)
chr7 (137-182)||(11288914-11288959)
chr7 (137-182)||(11296715-11296760)
chr7 (186-250)||(36477776-36477843)
chr7 (137-196)||(11266284-11266343)
chr7 (147-199)||(18385247-18385300)
chr7 (127-181)||(47342355-47342409)
chr7 (148-181)||(11017354-11017387)
chr7 (126-179)||(11289292-11289345)
chr7 (19-92)||(13343821-13343894)
chr7 (80-181)||(18385891-18385991)
chr7 (147-179)||(11247350-11247382)
chr7 (210-250)||(13346593-13346633)
[»] chr4 (46 HSPs)
chr4 (2-252)||(13521217-13521467)
chr4 (2-250)||(34561036-34561284)
chr4 (2-250)||(31297731-31297977)
chr4 (2-250)||(7902347-7902593)
chr4 (2-234)||(41817394-41817639)
chr4 (2-248)||(3997303-3997544)
chr4 (2-252)||(15225777-15226017)
chr4 (4-183)||(47575276-47575455)
chr4 (2-220)||(15011081-15011298)
chr4 (38-252)||(39320210-39320423)
chr4 (2-162)||(8660726-8660885)
chr4 (147-252)||(14891438-14891545)
chr4 (2-200)||(10713552-10713749)
chr4 (2-200)||(10927322-10927519)
chr4 (6-200)||(12488414-12488607)
chr4 (5-252)||(9184928-9185163)
chr4 (38-218)||(9190825-9190995)
chr4 (5-196)||(14898914-14899095)
chr4 (5-196)||(14868366-14868547)
chr4 (147-252)||(14898478-14898587)
chr4 (147-252)||(14898722-14898831)
chr4 (18-181)||(52742527-52742690)
chr4 (6-200)||(14953349-14953533)
chr4 (6-200)||(25690610-25690794)
chr4 (126-252)||(26034936-26035062)
chr4 (5-196)||(14877387-14877568)
chr4 (126-252)||(14868024-14868150)
chr4 (38-196)||(26034836-26034984)
chr4 (122-252)||(14868286-14868418)
chr4 (125-181)||(3309979-3310035)
chr4 (122-250)||(14877516-14877646)
chr4 (147-196)||(14868102-14868151)
chr4 (126-252)||(14868154-14868282)
chr4 (147-196)||(14898426-14898475)
chr4 (147-196)||(14898670-14898719)
chr4 (126-250)||(14898592-14898718)
chr4 (146-196)||(14868234-14868284)
chr4 (191-246)||(42314838-42314893)
chr4 (46-178)||(1150667-1150797)
chr4 (193-252)||(9190767-9190828)
chr4 (193-252)||(14891548-14891609)
chr4 (178-250)||(14898836-14898912)
chr4 (111-181)||(43477298-43477366)
chr4 (146-182)||(12383582-12383618)
chr4 (98-168)||(26187959-26188028)
chr4 (110-155)||(32545620-32545665)
[»] chr2 (46 HSPs)
chr2 (2-253)||(10159950-10160202)
chr2 (2-250)||(6297128-6297374)
chr2 (5-248)||(28855746-28855987)
chr2 (2-198)||(30658789-30658979)
chr2 (19-252)||(17452819-17453056)
chr2 (2-250)||(9785762-9786007)
chr2 (5-194)||(25375504-25375692)
chr2 (2-196)||(7559639-7559833)
chr2 (34-177)||(22845046-22845188)
chr2 (2-252)||(26897239-26897481)
chr2 (2-252)||(42248839-42249082)
chr2 (6-200)||(1284130-1284323)
chr2 (147-252)||(24286004-24286111)
chr2 (6-200)||(30344210-30344394)
chr2 (2-196)||(34070031-34070215)
chr2 (2-137)||(23068100-23068235)
chr2 (2-196)||(24292760-24292944)
chr2 (38-196)||(6856845-6856993)
chr2 (2-196)||(24286192-24286376)
chr2 (126-249)||(34070167-34070290)
chr2 (126-252)||(24286114-24286240)
chr2 (126-252)||(24292682-24292808)
chr2 (126-252)||(34070297-34070423)
chr2 (164-252)||(377512-377600)
chr2 (159-252)||(6857106-6857201)
chr2 (126-250)||(26903012-26903136)
chr2 (2-196)||(377588-377772)
chr2 (126-248)||(42249086-42249208)
chr2 (147-196)||(26897484-26897533)
chr2 (178-252)||(26902932-26903008)
chr2 (147-196)||(26903011-26903060)
chr2 (147-196)||(34070296-34070345)
chr2 (147-196)||(42249085-42249134)
chr2 (159-252)||(6856976-6857071)
chr2 (50-140)||(30641455-30641545)
chr2 (147-196)||(6857074-6857123)
chr2 (197-252)||(7559563-7559618)
chr2 (116-177)||(13290872-13290933)
chr2 (2-90)||(30635405-30635496)
chr2 (42-173)||(38426831-38426962)
chr2 (38-92)||(17327708-17327762)
chr2 (209-250)||(17327849-17327890)
chr2 (108-181)||(30640297-30640370)
chr2 (108-181)||(19589006-19589078)
chr2 (98-179)||(30635527-30635607)
chr2 (224-253)||(30658978-30659007)
[»] scaffold0041 (1 HSPs)
scaffold0041 (2-250)||(34938-35186)
[»] scaffold0020 (1 HSPs)
scaffold0020 (2-250)||(475-722)
[»] scaffold0070 (2 HSPs)
scaffold0070 (2-250)||(59038-59285)
scaffold0070 (46-250)||(63284-63487)
[»] chr6 (38 HSPs)
chr6 (2-249)||(6111998-6112241)
chr6 (2-252)||(15704144-15704393)
chr6 (2-252)||(2077424-2077673)
chr6 (2-196)||(16625028-16625212)
chr6 (6-200)||(22806967-22807160)
chr6 (6-200)||(16760998-16761192)
chr6 (2-200)||(27324346-27324541)
chr6 (2-252)||(26981207-26981451)
chr6 (1-180)||(31477011-31477187)
chr6 (74-172)||(28964135-28964233)
chr6 (147-252)||(27073836-27073943)
chr6 (2-92)||(24588570-24588660)
chr6 (147-252)||(16625295-16625400)
chr6 (147-252)||(26981454-26981561)
chr6 (2-92)||(19772404-19772494)
chr6 (6-200)||(22949848-22950032)
chr6 (6-200)||(22953804-22953988)
chr6 (6-200)||(23872292-23872476)
chr6 (6-200)||(23876248-23876432)
chr6 (9-196)||(14073754-14073931)
chr6 (22-179)||(2862779-2862934)
chr6 (171-252)||(19772288-19772369)
chr6 (166-252)||(14073921-14074008)
chr6 (165-252)||(27073742-27073833)
chr6 (5-252)||(18387547-18387782)
chr6 (49-200)||(14322695-14322845)
chr6 (108-181)||(2759470-2759542)
chr6 (22-179)||(2882082-2882237)
chr6 (116-178)||(15645417-15645479)
chr6 (40-91)||(2759769-2759820)
chr6 (39-105)||(27073634-27073700)
chr6 (19-92)||(15991087-15991160)
chr6 (149-200)||(31477011-31477061)
chr6 (111-181)||(15990977-15991045)
chr6 (193-252)||(16625231-16625292)
chr6 (108-181)||(2759657-2759729)
chr6 (122-179)||(15641033-15641090)
chr6 (209-250)||(28964098-28964139)
[»] scaffold0060 (2 HSPs)
scaffold0060 (2-250)||(47209-47455)
scaffold0060 (2-250)||(52153-52399)
[»] scaffold0182 (1 HSPs)
scaffold0182 (2-250)||(9116-9362)
[»] scaffold0061 (2 HSPs)
scaffold0061 (2-200)||(49269-49466)
scaffold0061 (186-252)||(49197-49263)
[»] scaffold0017 (2 HSPs)
scaffold0017 (2-200)||(149168-149365)
scaffold0017 (202-252)||(149387-149437)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-252)||(127015-127264)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-252)||(21919-22168)
[»] scaffold0628 (1 HSPs)
scaffold0628 (2-252)||(7000-7249)
[»] scaffold0575 (2 HSPs)
scaffold0575 (2-252)||(5114-5363)
scaffold0575 (72-252)||(2006-2185)
[»] scaffold0292 (1 HSPs)
scaffold0292 (2-252)||(7779-8028)
[»] scaffold0045 (1 HSPs)
scaffold0045 (138-252)||(83670-83784)
[»] scaffold0431 (1 HSPs)
scaffold0431 (2-200)||(14762-14959)
[»] scaffold0044 (8 HSPs)
scaffold0044 (5-252)||(81173-81412)
scaffold0044 (5-196)||(64775-64956)
scaffold0044 (126-252)||(81416-81542)
scaffold0044 (126-252)||(64908-65034)
scaffold0044 (126-252)||(65038-65164)
scaffold0044 (126-252)||(65168-65294)
scaffold0044 (147-196)||(65037-65086)
scaffold0044 (147-196)||(65167-65216)
[»] scaffold1910 (1 HSPs)
scaffold1910 (2-248)||(478-714)
[»] scaffold0144 (1 HSPs)
scaffold0144 (2-200)||(7489-7686)
[»] scaffold0019 (3 HSPs)
scaffold0019 (2-196)||(30296-30480)
scaffold0019 (147-249)||(24247-24349)
scaffold0019 (193-252)||(30499-30560)
[»] scaffold0132 (2 HSPs)
scaffold0132 (5-196)||(24594-24775)
scaffold0132 (193-252)||(24514-24575)
[»] scaffold0229 (1 HSPs)
scaffold0229 (6-200)||(10711-10904)
[»] scaffold0035 (1 HSPs)
scaffold0035 (47-250)||(6752-6954)
[»] scaffold0327 (6 HSPs)
scaffold0327 (2-196)||(19520-19704)
scaffold0327 (126-252)||(8819-8945)
scaffold0327 (147-196)||(8897-8946)
scaffold0327 (178-252)||(8949-9027)
scaffold0327 (147-183)||(19401-19437)
scaffold0327 (193-252)||(19440-19501)
[»] scaffold0157 (1 HSPs)
scaffold0157 (6-200)||(31870-32063)
[»] scaffold0141 (1 HSPs)
scaffold0141 (6-200)||(13297-13490)
[»] scaffold0205 (2 HSPs)
scaffold0205 (147-252)||(26819-26924)
scaffold0205 (2-92)||(30879-30969)
[»] scaffold0015 (14 HSPs)
scaffold0015 (147-252)||(187822-187929)
scaffold0015 (2-252)||(193487-193749)
scaffold0015 (126-252)||(192837-192963)
scaffold0015 (126-252)||(192967-193093)
scaffold0015 (126-252)||(193097-193223)
scaffold0015 (126-252)||(193357-193483)
scaffold0015 (126-249)||(193230-193353)
scaffold0015 (147-196)||(192915-192964)
scaffold0015 (147-196)||(193045-193094)
scaffold0015 (147-196)||(193175-193224)
scaffold0015 (147-196)||(193305-193354)
scaffold0015 (147-196)||(193435-193484)
scaffold0015 (147-196)||(187770-187819)
scaffold0015 (126-227)||(187717-187818)
[»] scaffold0572 (1 HSPs)
scaffold0572 (2-180)||(10281-10458)
[»] scaffold0124 (1 HSPs)
scaffold0124 (6-200)||(21272-21464)
[»] scaffold0031 (1 HSPs)
scaffold0031 (6-200)||(35297-35489)
[»] scaffold0009 (3 HSPs)
scaffold0009 (2-92)||(71743-71834)
scaffold0009 (101-179)||(71866-71943)
scaffold0009 (209-250)||(71933-71974)
[»] scaffold0232 (1 HSPs)
scaffold0232 (148-252)||(22649-22753)
[»] scaffold0452 (1 HSPs)
scaffold0452 (1-92)||(12360-12451)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-137)||(121178-121313)
[»] scaffold0478 (2 HSPs)
scaffold0478 (22-250)||(8219-8444)
scaffold0478 (72-250)||(2891-3066)
[»] scaffold0415 (1 HSPs)
scaffold0415 (6-200)||(1104-1289)
[»] scaffold0863 (2 HSPs)
scaffold0863 (126-252)||(2-128)
scaffold0863 (147-196)||(1-50)
[»] scaffold0357 (2 HSPs)
scaffold0357 (2-196)||(3645-3829)
scaffold0357 (126-252)||(3567-3693)
[»] scaffold0004 (2 HSPs)
scaffold0004 (164-252)||(199974-200062)
scaffold0004 (38-196)||(199838-199986)
[»] scaffold0720 (1 HSPs)
scaffold0720 (50-140)||(5895-5985)
[»] scaffold0008 (2 HSPs)
scaffold0008 (19-92)||(256441-256514)
scaffold0008 (108-181)||(256553-256625)
[»] scaffold0211 (2 HSPs)
scaffold0211 (204-250)||(27590-27636)
scaffold0211 (204-248)||(23040-23084)
[»] scaffold0096 (1 HSPs)
scaffold0096 (6-53)||(22325-22372)
[»] scaffold0777 (1 HSPs)
scaffold0777 (66-135)||(3811-3880)
[»] scaffold0155 (1 HSPs)
scaffold0155 (148-176)||(22400-22428)


Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 36936993 - 36936742
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  36936993 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 36936894  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36936893 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 36936794  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36936793 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 36936742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 36941747 - 36941496
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  36941747 aagcatcaactgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 36941648  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36941647 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 36941548  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36941547 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 36941496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 41997276 - 41997523
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  41997276 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 41997375  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41997376 aattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacataaatatattac 41997475  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41997476 tgagtatcaaaatatattttagatcatgtactaaaatatattagattg 41997523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 42002045 - 42002292
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  42002045 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 42002144  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42002145 aattctcatattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagtacataaatatattac 42002244  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattg 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42002245 tgagtatcaaaatatattttagatcatgtactaaaatatattagattg 42002292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 557308 - 557558
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||  |    
T  557308 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcag-t 557406  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  557407 gattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcagcacataaatatattac 557506  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  557507 tgagtatcaaaatatattttagagcatgtactaaaatatattagattgcctt 557558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 562080 - 562330
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||||  |    
T  562080 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtaagaaactttgggagcag-t 562178  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  562179 gattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtaccaaaatatattattcagcacataaatatattac 562278  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  562279 tgagtatcaaaatatattttagagcatgtactaaaatatattagattgcctt 562330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 32461026 - 32460781
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||  |||||| |    
T  32461026 aagcatcaactgtgaatttcggtgtatggaatgcattgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttaggagcaagt 32460927  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||     
T  32460926 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagaacaaaaatatattattcaatacagaaataaattat 32460827  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||     ||||||| ||||||||||||||||||||    
T  32460826 tgagtatcaaaatatatt-----tcatgtattaaaatatattagattgcct 32460781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 23977069 - 23976851
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||||||||  |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |    
T  23977069 aagcatcaactgtgaatttcagtgtatggaatgcactgtgtgagctctctatttatagagaaagttcactactaataagtgagaaactttgggagcaagt 23976970  T
Q  102 aattttcatattagatctagtacaaaaatatc-tcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23976969 aattctcatattagatctagtacaaaaatatcttcaaattgagtatcaaaatatatcatattgagtacaaaaatatattattcaatacatgaatatatta 23976870  T
Q  201 ctgagtatcaaaatatatt 219  Q
     ||||||  ||||||||||    
T  23976869 ttgagtacaaaaatatatt 23976851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 31732149 - 31732395
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  31732149 aagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 31732248  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | |||| ||||||||||     
T  31732249 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaatatattat 31732346  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||| ||||||||||||||| |||||||| | ||||||||||||||||||    
T  31732347 tgactatcaaaatatatttcagatcatgcattaaaatatattagattgc 31732395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 13300972 - 13300725
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  13300972 aagcatcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 13300873  T
Q  102 aattttcatattagatctagtaca-aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||| ||||||||||||||||||| ||||||||||||| | ||||||||| |||||  |||| | ||||  ||||||||||| | |||| ||||||||||    
T  13300872 aattctcatattagatctagtacaaaaaatatctcaaactaagtctcaaattatat--tattcaatacatgaatatattattgactacaaaaatatatta 13300775  T
Q  201 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
     ||| ||||||||||||||| |||||||| ||||||||||||||||||||    
T  13300774 ttgactatcaaaatatatttcagatcatgcactaaaatatattagattgc 13300725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 12044617 - 12044368
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactg-----tgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagag 96  Q
    ||||||||||| ||||||| ||||||||||| ||||||     |||||||||||| |||  ||||||| ||||| |||||||||||| |||||||| |||    
T  12044617 aagcatcaactttgaatttcggtgtgtggaatgcactgctgtgtgtgagctctctttttctagagaaaattcacaactaataagtgaaaaactttgggag 12044518  T
Q  97 caaataattttcatattagatctagtacaaaaa-tatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata 195  Q
    ||| |||||   |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||    
T  12044517 caagtaattcatatattacatctagtacaaaaaatatttcaaattgagtctcaaaatatatcatattgagta---aaatatattattcaatacagaaata 12044421  T
Q  196 tattactgagtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12044420 tattactgagtatcaaaatatatttcagatcatgtactaaaatatattagatt 12044368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 21826838 - 21827079
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || |||| ||| ||| ||||||||||||||||||| ||||||| |||||  |||||| ||||||||||||| || ||| ||||    
T  21826838 catcaactgtgaatttcggggtgtagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagtaat 21826937  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataa--atatattact 202  Q
    |          |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |    
T  21826938 tc---------atctagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattatt 21827027  T
Q  203 gagtatcaaa--atatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||  ||||||||||||||| | ||||||||||||||||||||||    
T  21827028 gagtatcaaaatatatattttagatcaagcactaaaatatattagattgcct 21827079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 21323458 - 21323328
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||  ||||| |    
T  21323458 aagcatcaactgtgaatttcggtgtatggaaaacactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttggaagcaagt 21323359  T
Q  102 aattttcatattagatctagtacaaaaatat 132  Q
    |||| |||||||| |||||||||||||||||    
T  21323358 aattctcatattatatctagtacaaaaatat 21323328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 36949400 - 36949575
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||| ||||| ||| ||||||| ||| ||||||||||||||||||||||| ||| ||| ||||  ||||||||||||||||||||| || ||| ||||    
T  36949400 catcaattgtgattttcggtgtgttgaatgcactgtgtgagctctctatttatagaaaaaattcataactaataagtgagaaactttgggaacaagtaat 36949499  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |  |||||||||||||||||||||||||||  ||||||||  ||||||||||  |||||||||||||||||||||||    
T  36949500 tcacatattagatctagtacaaaaatatct-taattgagtaccaaaatatattttattgagtacaaaaatatattat 36949575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 1429547 - 1429412
Alignment:
Q  112 ttagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaa 211  Q
    |||||||| ||||||||||||||||| ||||||  |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  1429547 ttagatctggtacaaaaatatctcaa-ttgagtaccaaaatatattatattgaatacaaaaatatattattcaatacataaatatattattgagtatcaa 1429449  T
Q  212 aatatattttagatcatgtactaaaatatattagatt 248  Q
    ||||||||| |||| |||  |||| ||||||||||||    
T  1429448 aatatatttcagataatgctctaagatatattagatt 1429412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 26869796 - 26869612
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||   ||| ||| ||||||||||||||||||| ||||||| |||||  |||||| ||||||||||||| || ||| |    
T  26869796 aagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagt 26869697  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26869696 aattc---------atctagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 26869612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 8770855 - 8771049
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaat-aagtgagaaactttgagagcaaa 100  Q
    |||||||||||||||||||  ||||   ||| ||| ||||||||||||||||||| ||||||| ||||| |||||| ||  ||||||||||  ||||||     
T  8770855 aagcatcaactgtgaatttcagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaataaaaagagaaactttacgagcaag 8770954  T
Q  101 taattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||  ||||| ||||||||||||||||||| || ||||| ||   ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  8770955 taattcacatatcagatctagtacaaaaatatttc-aattgtgtacaaaaatatatcatattaagtacaaaaatatattattcagtacataaatat 8771049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 3666536 - 3666702
Alignment:
Q  13 gtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatat 112  Q
    |||||||| ||||||| ||| || ||| |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| ||| |||||  |||||    
T  3666536 gtgaatttcggtgtgtagaatgccctgcgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgagaacaagtaattcacatat 3666635  T
Q  113 tagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    |||||||||||||||||||| | | |||||||   ||||||||| |||||  |||| ||||||||||    
T  3666636 tagatctagtacaaaaatatattatattgagtacaaaaatatattatattatgtaccaaaatatatt 3666702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 24435662 - 24435413
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||| |||||| | || ||||||  ||| |||||||| |||||||||||||| ||||||||||| |||||||||||||| | |||||  || ||| |||     
T  24435662 catcgactgtggaattcggtgtgaagaatgcactgtgagagctctctatttatagagaaagttctctactaataagtgaaagactttaggaacaagtaac 24435563  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tact 202  Q
    |   ||||||||||||||||||||||||||||| ||||||  |||||||| | |||||||| |||| |||||||| |||| |||| ||||||||  || |    
T  24435562 tcatatattagatctagtacaaaaatatctcaa-ttgagtaccaaaatatgttatattgaggacaataatatatttttcagtacaaaaatatatattatt 24435464  T
Q  203 gagtatcaaaatatatttt-agatcatgtactaaaatatattagattgcct 252  Q
    || ||  |||||||| ||| | || |||  |||||||||||||||||||||    
T  24435463 gactactaaaatataatttcatattatgctctaaaatatattagattgcct 24435413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 21323340 - 21323254
Alignment:
Q  164 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | || |||||||||||||| |||||||||    
T  21323340 agtacaaaaatatattattcagtacataaatatattattgagtatcaaaatatatttcaaattatgtactaaaatattttagattgc 21323254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 15395283 - 15395139
Alignment:
Q  41 gtgagctctctatttacagagaaagttcactactaataagtgagaaacttt-gag--agcaaataattttcatattagatctagtacaaaaatatctcaa 137  Q
    |||||||||||||||| ||||||| ||||| ||||||||||||| |||||| ||   || |||| |||  ||||||||||||| ||||||||||||||||    
T  15395283 gtgagctctctatttatagagaaaattcacaactaataagtgagtaacttttgaacaagtaaattattcacatattagatctactacaaaaatatctcaa 15395184  T
Q  138 attgagt-ctcaaaatatatcatattgagtacaaaaatatattatt 182  Q
     |||||| | | |||||||| |||||||||||||||||||||||||    
T  15395183 -ttgagtacccgaaatatattatattgagtacaaaaatatattatt 15395139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 10754062 - 10754152
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||    
T  10754062 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttg 10754152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 41099278 - 41099404
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| |||| || |||||||||||||  || ||||||||||||||||||| ||    
T  41099278 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttatccagtacataaatatatattattgagtatcaaaatatatttcag 41099375  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| ||||||||||||||||||||||||    
T  41099376 atcaagtactaaaatatattagattgcct 41099404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 41099178 - 41099326
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaa 137  Q
    ||||||||| ||||||||| ||||||| ||| | ||||||| |||| |||||||| || ||| |||||          ||||||||||||||||| ||||    
T  41099178 tgtgtgagccctctatttatagagaaacttcccaactaataggtgataaactttgggaacaagtaattc---------atctagtacaaaaatatgtcaa 41099268  T
Q  138 attgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
     |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41099269 -ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 41099326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 41099407 - 41099456
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41099407 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 41099456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 41099408 - 41099534
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| | |||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  41099408 aaaatatatcatattgagtacaaaaatatat--tattcaatacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 41099505  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    ||||   ||||||||||||||||||||||    
T  41099506 atcaaacactaaaatatattagattgcct 41099534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 10755460 - 10755549
Alignment:
Q  110 tattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    ||||||||||||||   |||||| |||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  10755460 tattagatctagtaattaaatatatcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 10755549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 26869529 - 26869480
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||    
T  26869529 caaaatatatcatattgagtacaaaaatatattatccagtacataaatat 26869480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 3666692 - 3666735
Alignment:
Q  209 caaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  3666692 caaaatatattttagatcaagtactaaaatatattagattgcct 3666735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 8771070 - 8771125
Alignment:
Q  197 attactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  8771070 attattgagtatcaaaatatattttagatcaagcactaaaatacattagattgcct 8771125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 21827119 - 21827211
Alignment:
Q  164 agtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||| ||  |||||| | | ||||||||||||||||||||    
T  21827119 agtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcagtaaaatatattagattgcct 21827211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 21827082 - 21827131
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||||    
T  21827082 caaaatatattatattgagtacaaaaatatattatccagtacataaatat 21827131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 26869593 - 26869532
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  26869593 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 26869532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 15395130 - 15395090
Alignment:
Q  209 caaaatatattttagatcatgtactaaaatatattagattg 249  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  15395130 caaaatatattttagatcaagcactaaaatatattagattg 15395090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 23976844 - 23976802
Alignment:
Q  206 tatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    ||||||||||||||| |||||||| | ||||||||||||||||    
T  23976844 tatcaaaatatatttcagatcatgcagtaaaatatattagatt 23976802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 3034255 - 3034506
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  3034255 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 3034354  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3034355 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 3034454  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3034455 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 3034506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 8070291 - 8070542
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  8070291 aagcatcaactgtgaatttcggtgtctggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 8070390  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8070391 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 8070490  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8070491 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 8070542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 8888542 - 8888793
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  8888542 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 8888641  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8888642 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattaa 8888741  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8888742 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 8888793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 3693230 - 3693482
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  3693230 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 3693329  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaaatatattattcaatacataaatatatta 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3693330 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaaatatattattcaatacataaatatatta 3693429  T
Q  201 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3693430 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 3693482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 3673198 - 3673450
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  3673198 aagcatcaactgtgaatttcagtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 3673297  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaaatatattattcaatacataaatatatta 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3673298 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaaatatattattcaatacataaatatatta 3673397  T
Q  201 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3673398 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 3673450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 8883782 - 8884033
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  8883782 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtaagctctttatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 8883881  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8883882 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattaa 8883981  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8883982 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 8884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 10585672 - 10585426
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  10585672 aagcatcaactgtgaattttggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 10585573  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||  ||||||||||| | |||||||||||||||     
T  10585572 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatat--tattcaatacatgaatatattattgactacataaatatattat 10585475  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||| ||||||||||||||| |||||||| ||||||||||||||||||||    
T  10585474 tgactatcaaaatatatttcagatcatgcactaaaatatattagattgc 10585426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 45904020 - 45903779
Alignment:
Q  9 aactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttc 108  Q
    |||||||||||| ||||| | ||||||||  ||||||||||||||||| |||||||||||   | ||||||||||||||||||  |||||| ||||| ||    
T  45904020 aactgtgaatttcggtgtattgaaagcacattgtgagctctctatttatagagaaagttccaaagtaataagtgagaaactttaggagcaagtaattctc 45903921  T
Q  109 atattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtat 208  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  45903920 atattagatctaatacaaaaatatctcaaattgagtctcaaaatatatcttattgagtacaaaaatttattattcagtacataaatatattattgagtat 45903821  T
Q  209 caaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    |||||||||||| | ||||||||||||||||| |||||||||    
T  45903820 caaaatatatttcaaatcatgtactaaaatattttagattgc 45903779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 22758662 - 22758423
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||||||||| ||||  | ||| |    
T  22758662 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaattttggaaacaagt 22758563  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  22758562 aatgcacctattagatctagtacttaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattat 22758464  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatat 242  Q
    ||||||||||||||||||| | | |||| ||||||||||||    
T  22758463 tgagtatcaaaatatatttcaaagcatgcactaaaatatat 22758423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 2 - 181
Target Start/End: Complemental strand, 6595875 - 6595697
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||| ||||||||| |||||  || ||||| ||||||||||||||||| ||||||| ||||| |||||||||||| |||||||| || ||| |    
T  6595875 aagcatcaactatgaattttgatgtgtaaaatgcactctgtgagctctctatttatagagaaaattcacaactaataagtgaaaaactttgggaacaagt 6595776  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||  |||||||||||||||||||||||||||  ||||||||   ||||||||| ||||||||||||||||||||||||    
T  6595775 aattcacatattagatctagtacaaaaatatct-taattgagtacaaaaatatattatattgagtacaaaaatatattat 6595697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 38 - 249
Target Start/End: Original strand, 53358754 - 53358964
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaa 137  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||| |||||  |  | ||||||||   ||||||||||| ||||||||||||| ||||    
T  53358754 tgtgtgagctctctatttataaagaaagttcacaactaataagtgaaaaactaaggaaacaaataatacacatattagatcaagtacaaaaatatttcaa 53358853  T
Q  138 attgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaa 237  Q
     | ||||  |||||||||| |||||| ||||||||| |||||||| | ||||| ||||||||| ||| ||||||||||||||| ||||||| ||||||||    
T  53358854 ct-gagtaccaaaatatattatattgcgtacaaaaacatattatttagtacattaatatattattgattatcaaaatatatttcagatcatttactaaaa 53358952  T
Q  238 tatattagattg 249  Q
    ||||||| ||||    
T  53358953 tatattacattg 53358964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 34 - 250
Target Start/End: Complemental strand, 12899193 - 12898983
Alignment:
Q  34 gcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatc 133  Q
    ||||| ||||| |||  |||||| ||||||| |||||  |||||||||||||||||||| || ||| |||||  |||||||||| |||||||||||||||    
T  12899193 gcactatgtgatctcattatttatagagaaaattcacagctaataagtgagaaactttgggaacaagtaattcacatattagatttagtacaaaaatatc 12899094  T
Q  134 tcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtact 233  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||       |||||||||| |||||||||||||||||||   || ||| |||    
T  12899093 tcaaattgagtatcaaaatatatcatgttgactacaaaaatatattattc------gaaatatattattgagtatcaaaatatatttcttattatgcact 12899000  T
Q  234 aaaatatattagattgc 250  Q
     ||||||||| ||||||    
T  12898999 gaaatatatttgattgc 12898983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 16749402 - 16749205
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |    
T  16749402 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 16749303  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  16749302 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 16749205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 19776497 - 19776694
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |    
T  19776497 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 19776596  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  19776597 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 19776694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 14425322 - 14425141
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| |||||   ||| ||| ||||||||||||||||||  ||||||| |||||  |||||| ||||||||||||| || ||| ||||    
T  14425322 catcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttctagagaaacttcacagctaataggtgagaaactttgggaacaagtaat 14425223  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |          |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14425222 tc---------atctagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 14425141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 43 - 248
Target Start/End: Original strand, 16048646 - 16048852
Alignment:
Q  43 gagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatttt-catattagatctagtacaaaaatatctcaaattg 141  Q
    |||| ||||||||| ||||||||||| |||||||||||||| |||||||| || ||| |||  |  ||| ||||||||||||||||||||||| || |||    
T  16048646 gagccctctatttatagagaaagttctctactaataagtgaaaaactttgggaacaattaaactcacatgttagatctagtacaaaaatatcttaa-ttg 16048744  T
Q  142 agtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatatttt-agatcatgtactaaaatat 240  Q
    |||  |||||||| | ||||| || |||| |||||||| |||| ||||||||||||||| ||| ||  |||||||||||| |||||||   |||||||||    
T  16048745 agtaccaaaatatgttatattaagaacaataatatatttttcagtacataaatatattattgactactaaaatatattttcagatcatactctaaaatat 16048844  T
Q  241 attagatt 248  Q
    ||||||||    
T  16048845 attagatt 16048852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 9707073 - 9706896
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |    
T  9707073 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 9706974  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 180  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  9706973 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 9706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 18699194 - 18699090
Alignment:
Q  148 aaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagat 247  Q
    ||||||||| ||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| | | |||| |||||||||||||||||    
T  18699194 aaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttcaaagcatgcactaaaatatattagat 18699095  T
Q  248 tgcct 252  Q
    |||||    
T  18699094 tgcct 18699090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 16023191 - 16023342
Alignment:
Q  49 tctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctca 148  Q
    |||||||| ||||||| ||||| ||||||| |||| |||||||| || ||| |||||  ||||||||||||||||||| ||||||||||||| |||  ||    
T  16023191 tctatttatagagaaaattcacaactaatatgtgacaaactttgggaacaagtaattcacatattagatctagtacaacaatatctcaaattaagtacca 16023290  T
Q  149 aaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    ||||| |||||||||  ||||||||||||||||  | |||| ||||||||||    
T  16023291 aaataaatcatattgcatacaaaaatatattatagagtacaaaaatatatta 16023342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 37439038 - 37438845
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| || |||| ||| | |||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  37439038 atcaactgtgaatttcggcgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 37438939  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||||||  ||| ||||||||||    
T  37438938 cacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagcacaaaaatatatta 37438845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 248
Target Start/End: Original strand, 16043154 - 16043359
Alignment:
Q  43 gagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattga 142  Q
    |||| ||||||||| ||||||||||| |||||||||||||| |||||||| || ||| ||| |  ||| ||||||||| |||||||||||||  ||||||    
T  16043154 gagccctctatttatagagaaagttctctactaataagtgaaaaactttgggaacaattaaatcacatgttagatctaatacaaaaatatct-taattga 16043252  T
Q  143 gtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatatttt-agatcatgtactaaaatata 241  Q
     |  |||||||  | ||||| || |||  |||||||| |||| ||||||||||||||| ||| ||  |||||||||||| |||||||   ||||||||||    
T  16043253 ttaccaaaatactttatattaagaacagtaatatatttttcagtacataaatatattattgactactaaaatatattttcagatcataccctaaaatata 16043352  T
Q  242 ttagatt 248  Q
    |||||||    
T  16043353 ttagatt 16043359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 248
Target Start/End: Original strand, 16055829 - 16056034
Alignment:
Q  43 gagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattga 142  Q
    |||| ||| ||||| ||||||||||| |||||||||||||| |||||||  || ||| ||| |  | |||||||||||||||||||||||||  ||||||    
T  16055829 gagccctccatttatagagaaagttctctactaataagtgaaaaactttaggaacaagtaactcacgtattagatctagtacaaaaatatct-taattga 16055927  T
Q  143 gtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatatttt-agatcatgtactaaaatata 241  Q
    ||  |||||||| | ||||| || |||| |||||||| |||| |||| |||||||||| ||| ||  |||||||||||| |||||||   |||| |||||    
T  16055928 gtaccaaaatatgttatattaaggacaataatatatttttcattacagaaatatattattgactacaaaaatatattttcagatcatactctaatatata 16056027  T
Q  242 ttagatt 248  Q
    |||||||    
T  16056028 ttagatt 16056034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 18350257 - 18350073
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||| |||| ||||||| ||| ||| ||||||||| ||||||||| ||||||| ||| | ||||||| ||||||||||||| || ||| |    
T  18350257 aagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcgcaactaataggtgagaaactttgggaacaagt 18350158  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          |||||||||||||||||  | |||||  |  |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  18350157 aatt---------catctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattatttagtacataaatat 18350073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 51922949 - 51923152
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| |||||   ||| ||| ||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||||| ||    
T  51922949 catcaactgtgaatttcggtgtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaaatcat 51923048  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactga 204  Q
    |          |||||||||||||||||  | |||||  |  |||||||||||||||||||||||||||||||||||| | ||||||||||| ||| | |    
T  51923049 t---------catctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatatattattgagtacataaatattttattca 51923138  T
Q  205 gtatcaaaatatat 218  Q
    ||||  ||||||||    
T  51923139 gtatataaatatat 51923152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 14425058 - 14424953
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaa--atatattttagatcatgtactaaaatatat 242  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||  |||||||| ||||||   ||||||||||||    
T  14425058 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatatttaagatcaaacactaaaatatat 14424959  T
Q  243 tagatt 248  Q
    ||||||    
T  14424958 tagatt 14424953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 4106804 - 4106620
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| ||||||| |||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  4106804 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac---------aagtaatg 4106714  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  4106713 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 4106620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 4110656 - 4110472
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| ||||||| |||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  4110656 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac---------aagtaatg 4110566  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  4110565 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 4110472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 8488872 - 8488696
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||| | ||| ||||||| ||| | |||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  8488872 aagcatcaactgtaactttcggtgtgtagaatg-actgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 8488774  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 180  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  8488773 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 8488696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 15965671 - 15965855
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| ||||||| |||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  15965671 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac---------aagtaatg 15965761  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  15965762 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 15965855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 15969595 - 15969779
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| ||||||| |||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  15969595 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac---------aagtaatg 15969685  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  15969686 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 15969779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 15973519 - 15973703
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| ||||||| |||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  15973519 atcaactgtgaatttcggtgtgtagaatgcactgtatgagttctctatttatagagagaatttacaactaataagtgagaaac---------aagtaatg 15973609  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  15973610 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 15973703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 29843 - 30024
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    ||||| |||||||||| |||||   ||| ||| ||||||||| ||||||||| ||| ||| ||||| ||||||| ||||||||||||| || ||| ||||    
T  29843 catcatctgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagaaaaatttcacaactaataggtgagaaactttgggaacaagtaat 29942  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |          ||||||||||||| ||| |||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29943 tc---------atctagtacaaaattatgtcaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 30024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 29976 - 30102
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  29976 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 30073  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  30074 atcaagcactaaaatatattagattgcct 30102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 30106 - 30232
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| ||||||  ||||| ||||||| |||||||||||||  || ||||||||||||||||||||||    
T  30106 aaaatatatcatattgagtacaaaaatatat--tattcagtacatgaatatgttattcagtacataaatatatattattgagtatcaaaatatattttag 30203  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  30204 atcaagaactaaaatatattagattgcct 30232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 8223547 - 8223731
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || ||   ||| ||| ||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  8223547 aagcatcaactgtgaatttcggggtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagt 8223646  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          ||||| |||||||||||  ||| ||   |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8223647 aattc---------atctaatacaaaaatatgccaa-ttatctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 8223731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 8223683 - 8223809
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  8223683 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 8223780  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  8223781 atcaagcactaaaatatattagattgcct 8223809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 18350121 - 18349995
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  18350121 aaaatatatcatattgagtacaaaaatatat--tatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 18350024  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  18350023 atcaagcactaaaatatattagattgcct 18349995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 18349991 - 18349868
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  18349991 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatcttattcagtacataaatatatattattgagtatcaaaatatatttcag 18349894  T
Q  224 atcatgtactaaaatatattagattg 249  Q
    |||| | |||||||||||||||||||    
T  18349893 atcaagcactaaaatatattagattg 18349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 51923082 - 51923208
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  ||||||||||| |||||| ||||||| || ||||||||||  || ||||||||||||||||||| ||    
T  51923082 aaaatatatcatattgagtacaaaaatatat--tattgagtacataaatattttattcagtatataaatatatattattgagtatcaaaatatatttcag 51923179  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | |||||||||||||||| |||||    
T  51923180 atcaagcactaaaatatattagactgcct 51923208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 53502512 - 53502439
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||| ||| |||||||||| ||||||||    
T  53502512 catattagatatagtacaaaaatatctcaaattgagtgccaaaatatatcctatcgagtacaaaagtatattat 53502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 8223813 - 8223937
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||| ||||||||||||||| ||    
T  8223813 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgaatatcaaaatatatttcag 8223910  T
Q  224 atcatgtactaaaatatattagattgc 250  Q
    |||| | ||||||||||||||||||||    
T  8223911 atcaagcactaaaatatattagattgc 8223937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 429061 - 429220
Alignment:
Q  22 ggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctag 121  Q
    ||||||||||| | ||| |||||||||| |||||| ||||||| ||||| | |||||  | || |||||||| |  || |||||  |||||||||||||     
T  429061 ggtgtgtggaatgaactttgtgagctctttatttatagagaaaattcacaagtaatatataagtaactttgacaataagtaattcacatattagatctac 429160  T
Q  122 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||| ||||||||||||||||||| ||| | |||| ||||  || | |||||||||||||    
T  429161 tacagaaatatctcaaattgagtcccaataaatataatatctagcataaaaatatattat 429220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 249
Target Start/End: Original strand, 8197330 - 8197453
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||  |||||| ||| ||||||||||||||| ||    
T  8197330 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatttatattattgaatatcaaaatatatttcag 8197427  T
Q  224 atcatgtactaaaatatattagattg 249  Q
    |||| | |||||||||||||||||||    
T  8197428 atcaagcactaaaatatattagattg 8197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 8197064 - 8197248
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || ||    || ||| ||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  8197064 aagcatcaactgtgaatttcggggtccataatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagt 8197163  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          ||||| |||||||||||  ||| ||   |  |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  8197164 aattc---------atctaatacaaaaatatgccaa-ttatctaccaaaatatatcatattgagtacaaaaatatattattcagtgcataaatat 8197248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 8197200 - 8197326
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| ||| || |||||| ||||||| |||||||||  |||||| ||||||||||||||||||| ||    
T  8197200 aaaatatatcatattgagtacaaaaatatat--tattcagtgcataaatatgttattcagtacataaatttatattattgagtatcaaaatatatttcag 8197297  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | |||||||| |||||||||||||    
T  8197298 atcaagcactaaaatttattagattgcct 8197326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 8197328 - 8197378
Alignment:
Q  146 tcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8197328 tcaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 8197378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 47540889 - 47540795
Alignment:
Q  87 actttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaata-tatcatattgagtacaaaaatatatta 180  Q
    |||||||||  || |||||| |||||||||||||||||||||||||||||||||||||  ||||||| | ||| ||  |||||||||||||||||    
T  47540889 actttgagactaagtaatttacatattagatctagtacaaaaatatctcaaattgagtgccaaaatattttcaaatcaagtacaaaaatatatta 47540795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 8223812 - 8223861
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8223812 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 8223861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 18349992 - 18349943
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18349992 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 18349943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 47541281 - 47541213
Alignment:
Q  111 attagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    |||| |||||||||||||||||||||||||||||   ||| ||||||||||||||| ||||||||||||    
T  47541281 attatatctagtacaaaaatatctcaaattgagtacaaaagtatatcatattgagtgcaaaaatatatt 47541213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 14679958 - 14680080
Alignment:
Q  77 taagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatat 176  Q
    ||||||||||||||||  | ||| ||||   | ||||||||||||||   |||||| |||| |||||| ||||||| ||| ||||| |||||||||||||    
T  14679958 taagtgagaaactttggaaacaagtaatgcacctattagatctagtaattaaatatatcaa-ttgagtatcaaaatttattatattaagtacaaaaatat 14680056  T
Q  177 attattcaatacataaatatatta 200  Q
    |||||||| |||| ||||||||||    
T  14680057 attattcattacacaaatatatta 14680080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 30105 - 30154
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  30105 caaaatatatcatattgagtacaaaaatatattattcagtacatgaatat 30154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 11997356 - 11997288
Alignment:
Q  112 ttagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||||| ||||||||||||||||| ||| ||   ||||||||||||||||||||||||||||||||||    
T  11997356 ttagatcttgtacaaaaatatctcaa-ttgtgtacgaaaatatatcatattgagtacaaaaatatattat 11997288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 19340221 - 19340289
Alignment:
Q  110 tattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatat 178  Q
    ||||||||||| || |||||||||| |||||||||  ||||||||||| ||||||||| ||||||||||    
T  19340221 tattagatctaatagaaaaatatcttaaattgagtaccaaaatatatcgtattgagtaaaaaaatatat 19340289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 35456404 - 35456332
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    |||||||||||||| ||||| |||||  |||||||||| ||||||| ||||| ||||||||| |||||||||||    
T  35456404 tttggtgtgtggaatgcactatgtgaattctctatttatagagaaaattcacaactaataag-gagaaactttg 35456332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 18699260 - 18699200
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagaga 62  Q
    ||||||||| ||||||||| ||||||| ||| |||||||||||| |||||||||| |||||    
T  18699260 aagcatcaagtgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagaga 18699200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 14425122 - 14425061
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  14425122 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 14425061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 55204015 - 55203920
Alignment:
Q  80 gtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatat 176  Q
    |||||||||||||||| ||| ||||   |||  |||||||||||  ||||||||||| |||||||   ||||||| ||||||||||||| |||||||    
T  55204015 gtgagaaactttgagaacaattaatccacat-gtagatctagtattaaaatatctcatattgagtactaaaatatctcatattgagtaccaaaatat 55203920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 18012065 - 18012152
Alignment:
Q  87 actttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaat 174  Q
    |||||| || ||| |||||  |||||||||| ||||| |||||||| | ||||| |||  |||||||||||| |||||||| ||||||    
T  18012065 actttgcgaacaagtaattcacatattagatttagtagaaaaatattttaaattaagtaccaaaatatatcacattgagtaaaaaaat 18012152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 18011968 - 18012042
Alignment:
Q  18 ttttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    ||||||||||| ||||  ||| |||||||| | |||||| ||||||| ||||| ||||||| |||| ||||||||    
T  18011968 ttttggtgtgtagaaatgactatgtgagctatttatttatagagaaaattcacaactaatatgtgataaactttg 18012042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 35456314 - 35456221
Alignment:
Q  87 actttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||||||  || |||||  |||||||||||| |||||||||  |||||| | ||||  |||||||||| || |||||||||||||||| ||||    
T  35456314 actttgagattaagtaattcacatattagatcttgtacaaaaacttctcaact-gagtaccaaaatatattatgttgagtacaaaaatattttat 35456221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 47540963 - 47540898
Alignment:
Q  40 tgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||| || |||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |||||    
T  47540963 tgtgaactttctatttatagagaaaattcacaactaatatgtgagaaactttgggaacaagtaatt 47540898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 20497851 - 20497784
Alignment:
Q  110 tattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatat 178  Q
    ||||||||||||||||||||||| || |||| ||| |||| |||||| ||||||  ||| |||||||||    
T  20497851 tattagatctagtacaaaaatatttc-aattaagtgtcaatatatattatattgtttacgaaaatatat 20497784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 53502434 - 53502390
Alignment:
Q  204 agtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    |||| |||||||||||| |||||| |||| |||||||||||||||    
T  53502434 agtaccaaaatatatttcagatcaagtaccaaaatatattagatt 53502390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 4237823 - 4237572
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  4237823 aagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 4237724  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4237723 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 4237624  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4237623 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 4237572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 4242562 - 4242311
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  4242562 aagcatcaactgtgaatttcggtgcgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 4242463  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4242462 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 4242363  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4242362 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 4242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 31449348 - 31449096
Alignment:
Q  1 aaagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaa 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||     
T  31449348 aaagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaag 31449249  T
Q  101 taattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  31449248 taattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatatcgagtacaaaaatatattattcagtacataaatatatta 31449149  T
Q  201 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31449148 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 31449096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 43302166 - 43301917
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||||| |    
T  43302166 aagcatcaactgtgaatttcgatgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaagtaataagtgagaaactttgggagcaagt 43302067  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43302066 aattctcatattagatttagtacaaaaatatctcaaattgagtc--aaaatatatcatattgagtacaaaaatatattattcagtacataaatatattac 43301969  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43301968 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 43301917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 8330845 - 8330599
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  8330845 aagcatcaactgtgaatttcggtgtatggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 8330746  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||     
T  8330745 aattctcatattagatatagtacaaaaatatctcaaattgagtctcaaaatatatcttattgagtacaaaaatatattattcagtacaaaaatatattat 8330646  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    |||||||||||  | |||| ||||||||||||||||||| |||||||||    
T  8330645 tgagtatcaaa--acatttcagatcatgtactaaaatattttagattgc 8330599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 34818188 - 34817940
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||   ||||||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||  |||||| |    
T  34818188 aagcatcaactgtgaatttcggtgtaccgaaagcactgtgtgaactctctatttatagagaaagttcacaactaataactgagaaactttcggagcaagt 34818089  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||     
T  34818088 aattctcatattagatctagtacaaaaacatctcaaattgagtctcaaaatatatcttattgagtacaaaaatatattattcagtacagaaatatattat 34817989  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  34817988 tgagtatcaaaatatatttcagatcatgtactaaaatattttagattgc 34817940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 25367468 - 25367221
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||| || ||| |    
T  25367468 aagcatcaattgtgaatttcggtgtatggaaagcactgtgtgaactctctatttatagagaaagttcacaactagtaagtgagaaactttgggatcaagt 25367369  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||     
T  25367368 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatataatattgagtac-aaaatatattattcagtacaaaaatatattat 25367270  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  25367269 tgagtatcaaaatatatttcagatcatgtactaaaataatttagattgc 25367221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 37772319 - 37772564
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  37772319 aagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 37772418  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
      || |||||||||||||||||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | |||| ||||||||||     
T  37772419 -tttctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaatatattat 37772515  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||| ||||||||||||||| |||||||| | ||||||||||||||||||    
T  37772516 tgactatcaaaatatatttcagatcatgcattaaaatatattagattgc 37772564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 23915104 - 23915353
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||| |||||||||| || || |||| || |||||||| ||||||||||||  | |||||    
T  23915104 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaataaatgagaaactttggaaacaaat 23915203  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  23915204 aatgcacctattagatctagtacttaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatattat 23915302  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    | ||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  23915303 taagtatcaaaatatatttcaaagtatgtactaaaatatattagattgcct 23915353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 21411635 - 21411832
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  21411635 aagcatcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 21411734  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  21411735 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 21411832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 21806127 - 21806324
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  21806127 aagcatcaactgtgaatttcggtgtgtagaatgcactatgcgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 21806226  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  21806227 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 21806324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 22104290 - 22104471
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||| ||||||||| |||||   ||| ||| ||||||||||||||||||| ||||||| |||||  |||||| ||||||||||||| || ||| ||||    
T  22104290 catcaaatgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaataggtgagaaactttgggaacaagtaat 22104389  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |          |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22104390 tc---------atctagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 22104471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 19393213 - 19393029
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || ||    || ||| |||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| |    
T  19393213 aagcatcaactgtgaatttcggggtccataatgcattgtgtgagatctctatttatagagaaatttcacaactaataagtgagaaactttgggaacaagt 19393114  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          || ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19393113 aattc---------atttagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 19393029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 21384356 - 21384552
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||||  || |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  21384356 aagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 21384455  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| |||||  |||||||||||||||||||| |||| ||||||||||    
T  21384456 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaggtacaaaaatatattattcagtaca-aaatatatta 21384552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 21387776 - 21387972
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||||  || |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  21387776 aagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 21387875  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| |||||  |||||||||||||||||||| |||| ||||||||||    
T  21387876 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaggtacaaaaatatattattcagtaca-aaatatatta 21387972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 252
Target Start/End: Complemental strand, 25733556 - 25733415
Alignment:
Q  110 tattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatc 209  Q
    |||||||||||||||  ||||||||||| ||||||   ||||||||| ||||| |||||||||||| |||||||| |||| |||||||||| | ||||||    
T  25733556 tattagatctagtacttaaatatctcaa-ttgagtactaaaatatattatattaagtacaaaaatacattattcagtacaaaaatatattattaagtatc 25733458  T
Q  210 aaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||| | | |||| ||||||||||||||||||||||    
T  25733457 aaaatatatttcaaagcatgcactaaaatatattagattgcct 25733415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 10933923 - 10934031
Alignment:
Q  73 ctaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaa 172  Q
    |||||| |||||||||||||  | ||| |||||  ||||||||||||||||||||||||||| |||||||||  |||||||| |||||||||||||||||    
T  10933923 ctaatatgtgagaaactttggtaacaagtaattcacatattagatctagtacaaaaatatcttaaattgagtgccaaaatatgtcatattgagtacaaaa 10934022  T
Q  173 atatattat 181  Q
    |||||||||    
T  10934023 atatattat 10934031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 4582778 - 4582593
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||| |||| ||||||| ||| ||| ||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  4582778 aagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagt 4582679  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatat-attattcaatacataaatat 196  Q
    ||||          |||||||||||||||||  | |||||  |  |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4582678 aatt---------catctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtacaaaaatataattattcagtacataaatat 4582593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 250
Target Start/End: Original strand, 17153198 - 17153395
Alignment:
Q  50 ctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaa 149  Q
    ||||||| |||||||  |||| ||||||| ||||||||||||| || ||| |||||  |||||||||| |||||||||||||||||||||| ||| || |    
T  17153198 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaacaagtaattcacatattagatttagtacaaaaatatctcaaattcagtatc-a 17153296  T
Q  150 aatatatcatattgagtac-aaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    |||| |||||||||||||| ||||||||||| || | |||  |||||||||| | |||  |||||||||| |   |||| |||| |||||||||||||||    
T  17153297 aatagatcatattgagtacaaaaaatatatt-ttgagtac--aaatatattattcagtgccaaaatatatgtctaatcacgtacgaaaatatattagatt 17153393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 18862048 - 18861864
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  18862048 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac---------aagtaatg 18861958  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  18861957 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 18861864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 16066699 - 16066515
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||    |  ||| ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| |  ||| |    
T  16066699 aagcatcaactgtgaatttcggtgtccatagtgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaactttggggacaagt 16066600  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          || ||||||||||||||| ||| ||||||   ||||||||| |||||||||||||||||||||||| || |||||||||||    
T  16066599 aattc---------atgtagtacaaaaatatcccaa-ttgagtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatat 16066515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 250
Target Start/End: Complemental strand, 17157486 - 17157289
Alignment:
Q  50 ctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaa 149  Q
    ||||||| |||||||  |||| ||||||| ||||||||||||| || ||  |||||  || |||||||||||| ||||||||||||||||| |||  | |    
T  17157486 ctatttatagagaaaaatcacaactaatatgtgagaaactttgggaacacgtaattcacaaattagatctagttcaaaaatatctcaaattcagt-acca 17157388  T
Q  150 aatatatcatattgagtac-aaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    |||| |||||||||||||| ||||||||||| || | |||  |||||||||| |||||  |||||||||| |   |||| |||| |||||||||||||||    
T  17157387 aatagatcatattgagtacaaaaaatatatt-ttgagtac--aaatatattattgagtgccaaaatatatgtctaatcacgtacgaaaatatattagatt 17157291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 4582591 - 4582513
Alignment:
Q  176 tattattcaatacataaatatat--tactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||| |||||||||||||  || ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  4582591 tattattcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcct 4582513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 29220759 - 29220871
Alignment:
Q  66 ttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgag 165  Q
    ||||| |||||||  ||||||||||||| | ||||||| |   |||||| ||||||||||||||||||||||||  |||  |||| |||||||||||||     
T  29220759 ttcacaactaatatatgagaaactttgaaaacaaataact---atattatatctagtacaaaaatatctcaaatcaagtaccaaagtatatcatattgaa 29220855  T
Q  166 tacaaaaatatattat 181  Q
    ||||||||||| ||||    
T  29220856 tacaaaaatattttat 29220871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 19391386 - 19391327
Alignment:
Q  193 atatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  19391386 atatactattgagtatcaaaatatatttcagatcatgcactaaaatatattagattgcct 19391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 21827417 - 21827335
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaac 88  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| |||||   || || |||||||||||||||||    
T  21827417 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatcatttacaactaataagtgagaaac 21827335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 22104554 - 22104603
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  22104554 caaaatatatcatattgagtagaaaaatatattattcagtacataaatat 22104603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 22104555 - 22104683
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataa--atatattactgagtatcaaa--atatatttt 221  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||  |||||||| |||||||||||  ||||||||     
T  22104555 aaaatatatcatattgagtagaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatattta 22104652  T
Q  222 agatcatgtactaaaatatattagattgcct 252  Q
    ||||||   ||||||||||||||||||||||    
T  22104653 agatcaaacactaaaatatattagattgcct 22104683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 14036186 - 14036254
Alignment:
Q  87 actttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatata 155  Q
    |||||| || |||||||||  | | ||||||||||||||||||||||||||||||||| ||||||||||    
T  14036186 actttgggaacaaataattcacttgttagatctagtacaaaaatatctcaaattgagtatcaaaatata 14036254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 16066527 - 16066442
Alignment:
Q  164 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||| |||||| ||||||| ||||||||||||||| || ||||||||||||   | ||||||   ||||||||||||||||||||||    
T  16066527 agtacataaatatgttattcagtacataaatatattattgtgtatcaaaatat---tcagatcaaacactaaaatatattagattgcct 16066442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 19392946 - 19392897
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  19392946 caaaatatattatattgagcacaaaaatatattattcagtacataaatat 19392897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 25733647 - 25733593
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctattta 56  Q
    ||||||||||||||||||| ||||||| ||| ||||| |||||| ||||||||||    
T  25733647 aagcatcaactgtgaatttcggtgtgtagaatgcactttgtgagttctctattta 25733593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 14036087 - 14036157
Alignment:
Q  22 ggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    ||||||||||| | | | ||||||||||||||||| ||| ||| ||||| | ||||| |||||||||||||    
T  14036087 ggtgtgtggaatgaattttgtgagctctctatttatagaaaaaattcacgattaatatgtgagaaactttg 14036157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 21827322 - 21827253
Alignment:
Q  110 tattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 180  Q
    ||||||||||||||   |||||| |||| ||||||  |||||||||| ||||| |||||||||||||||||    
T  21827322 tattagatctagtaattaaatatatcaa-ttgagtaccaaaatatattatattaagtacaaaaatatatta 21827253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 22104490 - 22104551
Alignment:
Q  193 atatattactgagtatcaaa--atatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||| |||||||||||  |||||||| ||||||   ||||||||||||||||||||||    
T  22104490 atatattattgagtatcaaaatatatatttcagatcaaacactaaaatatattagattgcct 22104551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 42972857 - 42972905
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatc 157  Q
    ||||||||||| |||||||||||||||| ||||||||  |||||||||||    
T  42972857 catattagatcaagtacaaaaatatctc-aattgagtaccaaaatatatc 42972905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 14036274 - 14036322
Alignment:
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    |||||| |||| ||||||| |||||| |||| |||||||||||||||||    
T  14036274 tgagtaccaaagtatatttcagatcaagtaccaaaatatattagattgc 14036322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 6 - 253
Target Start/End: Original strand, 3094705 - 3094952
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  3094705 atcaactgtgaatttcggtgtgtggaatgcactgtgtgaactctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagtaatt 3094804  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgag 205  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3094805 ctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgag 3094904  T
Q  206 tatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3094905 tatcaaaatatattttagatcatgtactaaaatatattagattgcctt 3094952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 41097440 - 41097192
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  41097440 aagcatcaactgtgaatttcggtgtgtggaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 41097341  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||  ||||||||||| | |||| ||||||||||     
T  41097340 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatat--tattcaatacatgaatatattattgactacaaaaatatattat 41097243  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  41097242 tgactatcaaaatatatttcagatcatgcactaaaatatattagattgcct 41097192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 40232870 - 40232625
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  40232870 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 40232771  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||     ||||  |||| |||||| |  ||| ||||||||||     
T  40232770 aattctcatattagatctagtacaaaaatatctcaaattgtgtatcaaaatatatcata-----tacatgaataaattattgaggacaaaaatatattat 40232676  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||| ||||||||||||||| | |||| | ||||||||||||||||||||||    
T  40232675 tgactatcaaaatatatttcatatcacgcactaaaatatattagattgcct 40232625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 17213923 - 17213678
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||| | ||||| ||||| | ||| | ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || ||| ||||    
T  17213923 catcaactataaatttcggtgtatcgaatgtactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggaacaagtaat 17213824  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactga 204  Q
    |  |||||||| |||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| | |||| |||||||| | |||    
T  17213823 tcacatattagttctaatacaaaaatatctcaaattgtgtatcaaaatatatcttattgagtacaaaaatatattatttagtacaaaaatatatcattga 17213724  T
Q  205 gtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||| |||  |||||  |||||||| ||||||||||||||||||||||    
T  17213723 gtattaaa--atattcaagatcatgcactaaaatatattagattgcct 17213678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 19725386 - 19725140
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||    ||| ||| ||||||| ||||||||||| |||||||  |||| |||||||| |||||||||||| |||||| |    
T  19725386 aagcatcaactgtgaatttcggtgcccagaatgcaatgtgtgaactctctatttatagagaaa--tcacaactaataaatgagaaactttgggagcaagt 19725289  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    ||||   |||| |||| ||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||     
T  19725288 aattcaaatatcagatatagtacaaaaatatctcaa-ttgtgtaccaaaatatatcatattgagtacaaaaatatgttattcagtacataaatacattat 19725190  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcc 251  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  19725189 tgagtatcaaaatatattttagatcaagcactaaaatacattagattgcc 19725140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 19727013 - 19727225
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaa 137  Q
    |||||||||||||||||||  ||||||   ||| |||||||| ||||||| ||||||||||| |||||  ||||| |||||||||||||||| |||||||    
T  19727013 tgtgtgagctctctatttatcgagaaatcacacaactaataaatgagaaattttgagagcaagtaattcacatatcagatctagtacaaaaacatctcaa 19727112  T
Q  138 attgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaa 237  Q
     ||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| |   |||||||    
T  19727113 -ttgtgtttcaaaatatatcatattgagtacaaaaatatattattcagtacataaatacattattgagtatcaaaatatattttagattaaacactaaaa 19727211  T
Q  238 tatattagattgcc 251  Q
    || |||||||||||    
T  19727212 tacattagattgcc 19727225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 8267292 - 8267138
Alignment:
Q  44 agctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgag 143  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||| |||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  8267292 agctctctatttatagagaaagttcacaactaataagtgataaactttgtgagcaagtaattctcatattagatctagtacaaaaatatctaaaattgag 8267193  T
Q  144 tctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatt 199  Q
    ||||||||||||||||||||| ||||||||||| ||||| |  |||||||||||||    
T  8267192 tctcaaaatatatcatattga-tacaaaaatattttattaagaacataaatatatt 8267138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 13893928 - 13894105
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||| |||  |||||| ||| ||| ||||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| |    
T  13893928 aagcatcaactgtgattttcagtgtgtagaatgcattgtgtgaactctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagt 13894027  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||  |||||||||||||||||||||| |||||  | | |||  |||||||||| ||||||||||||||||||||||||    
T  13894028 aattcacatattagatctagtacaaaaacatctc--agttagtaccaaaatatattatattgagtacaaaaatatattat 13894105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 26198970 - 26199214
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||   ||| ||| ||||||||||||||||||| ||||||| |||||  |||| | |||| |||||||| || ||| |    
T  26198970 aagcatcaactgtgaatttcggtgtacagaatgcattgtgtgagctctctatttatagagaaacttcacagctaaaaggtgaaaaactttgggaacaagt 26199069  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataa--atatatt 199  Q
    ||||          |||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||| |||||||  |||||||    
T  26199070 aattc---------atctagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacagaaatatattattcagtacataaatatatatt 26199159  T
Q  200 actgagtatcaaa--atatattttagatcatgtactaaaatatattagattgcct 252  Q
    |  ||||||||||  |||||||| ||||||   ||||||||||||||||||||||    
T  26199160 atcgagtatcaaaatatatatttcagatcaaacactaaaatatattagattgcct 26199214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 41387455 - 41387260
Alignment:
Q  4 gcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataa 103  Q
    ||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |||    
T  41387455 gcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaa 41387356  T
Q  104 ttttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |   | ||||||||||||||   |||||| || ||||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  41387355 tgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 41387260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 39243505 - 39243308
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |    
T  39243505 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 39243406  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | | ||||||||||||   |||||| || ||||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  39243405 aatgcacctgttagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 39243308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 39247060 - 39246863
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |    
T  39247060 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 39246961  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | | ||||||||||||   |||||| || ||||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  39246960 aatgcacctgttagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 39246863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 27308332 - 27308194
Alignment:
Q  40 tgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaat 139  Q
    ||||||| ||||||||| ||||||| |||||||||||||   |||||||||||||| |||||||||  |||||||||||||||||||||| |||||||||    
T  27308332 tgtgagcactctatttatagagaaaattcactactaatataagagaaactttgagaacaaataattcacatattagatctagtacaaaaacatctcaaat 27308233  T
Q  140 tgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    |||||  ||||||||||||||||  |||| ||||||||||    
T  27308232 tgagtaccaaaatatatcatatt-cgtaccaaaatatatt 27308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 16836768 - 16836583
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||   ||| ||||||||||||||||||||||| ||||||| |||||    ||||||    ||||||||| | ||| |    
T  16836768 aagcatcaactgtgaatttcggtgtccagaatgcactgtgtgagctctctatttatagagaaaattcac----aataag----aaactttgaaaacaagt 16836677  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    || |  |||||||||| || |||||||||||||||| ||||||  |||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  16836676 aactcacatattagatataatacaaaaatatctcaa-ttgagtaccaaaatatattatattgagtagaaaaatatattattcagtacataaatat 16836583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 23285305 - 23285074
Alignment:
Q  18 ttttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagat 117  Q
    |||| |||||| ||| ||| | |||| ||| |||||||| ||||||| ||||| | ||||| ||||||| ||||| || ||| ||||    |||||||||    
T  23285305 tttttgtgtgtagaatgcaatttgtgggctatctatttatagagaaaattcacaattaatatgtgagaacctttgggaacaagtaatcaa-atattagat 23285207  T
Q  118 ctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatata 217  Q
     ||  | ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| | | || ||||||| || ||||||| ||||||||    
T  23285206 ataacaaaaaaatatctcaaattgagtaccaaaatatatcatattgagtacaaaaatattttattgagtgcaaaaatatactattgagtattaaaatata 23285107  T
Q  218 ttttagatcatgtactaaaatatattagattgc 250  Q
    ||| ||| || |||| ||||||||||| |||||    
T  23285106 tttcagaccacgtaccaaaatatattatattgc 23285074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 22428674 - 22428494
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || ||   ||| ||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| ||||    
T  22428674 catcaactgtgaatttcgg-gtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaacaagtaat 22428576  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||         |||||||||||||||||| ||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22428575 tt---------atctagtacaaaaatatcccaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 22428494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 14819587 - 14819768
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || || | ||| ||| ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| ||||    
T  14819587 catcaactgtgaatttcggggtctagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 14819686  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |          || ||||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||||||||  | |||||||||    
T  14819687 t---------catttagtacaaaaatatctc-aattgagtaccaaaatatatcatattgagtataaaaatatattattcggtccataaatat 14819768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 14804119 - 14804300
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || || | ||| ||| || |||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| ||||    
T  14804119 catcaactgtgaatttcggggtctagaatgcattgcgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaat 14804218  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |          || |||||||||||||| |||| ||||||  |||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  14804219 tc---------atttagtacaaaaatatttcaa-ttgagtaccaaaatatttcatattgagtacaaaaatatattattcagtccataaatat 14804300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 1924532 - 1924348
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  1924532 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac---------aagtaatg 1924442  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  1924441 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 1924348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 20923546 - 20923362
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  20923546 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac---------aagtaatg 20923456  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  20923455 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 20923362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 246
Target Start/End: Complemental strand, 39037049 - 39036929
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagat 225  Q
    |||||||||||||| ||||  |||||||||||||||||  || |||||||||||||| | |||| |||||||||| ||||| ||||||||||||| ||||    
T  39037049 aaaatatctcaaatagagtaccaaaatatatcatattgtatagaaaaatatattattgagtacaaaaatatattattgagtgtcaaaatatatttcagat 39036950  T
Q  226 catgtactaaaatatattaga 246  Q
    || || | |||||||||||||    
T  39036949 cacgtgccaaaatatattaga 39036929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 1067093 - 1067246
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| | |||    || ||| |||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||  || ||  |    
T  1067093 aagcatcaactgtgaatttcgttgtccataatgcaatgtgtgagttctctatttatagagaaaattcacaactaataagtgagaaactttaggaacacgt 1067192  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatat 156  Q
    ||||  ||||||||||||||||| |||||||||| ||||||||  ||||||||||    
T  1067193 aattcacatattagatctagtaccaaaatatctc-aattgagtaccaaaatatat 1067246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 21498263 - 21498525
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||| |||| ||||||| ||| ||| ||||||||| ||||||||| ||||||| ||| | ||||||| ||||||||||||| || ||| |    
T  21498263 aagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagt 21498362  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat----- 196  Q
    ||||          |||||||||||||||||  ||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||         
T  21498363 aattc---------atctagtacaaaaatatgccaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttat 21498452  T
Q  197 -----------------attactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
                     |||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  21498453 ccagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcct 21498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 21498529 - 21498655
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  21498529 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 21498626  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  21498627 atcaagcactaaaatatattagattgcct 21498655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 2367655 - 2367839
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||||||||  ||||   ||| ||| ||||||||||||||||||| ||||||  || ||  |||||| ||||||||||||| || ||| |    
T  2367655 aagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaagctttacagctaataggtgagaaactttgggaacaagt 2367754  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          |||||||||||||||||  ||| |||  |  |||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  2367755 aattc---------atctagtacaaaaatatgccaa-ttgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacatgaatat 2367839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 2384728 - 2384544
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||||||||  ||||   ||| ||| ||||||||||||||||||| ||||||  || |   |||||| ||||||||||||| || ||| |    
T  2384728 aagcatcaactgtgaatttccgtgtccagaatgcattgtgtgagctctctatttatagagaagctttagagctaataggtgagaaactttgggaacaagt 2384629  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          ||||||||||||||||| |||| |||  |  |||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  2384628 aattc---------atctagtacaaaaatatgtcaa-ttgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacatgaatat 2384544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 248
Target Start/End: Complemental strand, 52100443 - 52100321
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  52100443 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 52100346  T
Q  224 atcatgtactaaaatatattagatt 248  Q
    |||| | ||||||||||||||||||    
T  52100345 atcaagcactaaaatatattagatt 52100321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 33055651 - 33055723
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaat 77  Q
    |||||||||||||||||||||| | ||| ||||||||||| ||||||||||| ||||||||||||| ||||||    
T  33055651 catcaactgtgaattttggtgtatagaatgcactgtgtgaactctctatttatagagaaagttcacaactaat 33055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 2367791 - 2367917
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| ||||||  ||||| ||||||| |||||||||||||  |  ||||||||||||||||||| ||    
T  2367791 aaaatatatcatattgagtacaaaaatatat--tattcagtacatgaatatgttattcagtacataaatatatattcttgagtatcaaaatatatttcag 2367888  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  2367889 atcaagcactaaaatatattagattgcct 2367917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 21498528 - 21498577
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21498528 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 21498577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 52100444 - 52100395
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  52100444 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 52100395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 52100542 - 52100450
Alignment:
Q  159 tattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttagatcatgtactaaaatatattagattg 249  Q
    |||| |||||| |||||| ||||| | |||||||||||||  || ||||||||||||||||||| |||||| | |||||||||||||||||||    
T  52100542 tattcagtacataaatatgttatttagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattg 52100450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 39036850 - 39036786
Alignment:
Q  186 tacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    |||| |||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  39036850 tacaaaaatatatgattgagtgtcaaaatatatttcagatcatgtactaaaatatattagattgc 39036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 26199234 - 26199368
Alignment:
Q  120 agtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatata 217  Q
    ||||||||||||| ||| |||||||   |||||||||  |||  |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||    
T  26199234 agtacaaaaatatatcatattgagtacaaaaatatat--tatccagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatata 26199331  T
Q  218 tttt--agatcatgtactaaaatatattagattgcct 252  Q
    | ||  |||||| | | ||||||||||||||||||||    
T  26199332 tatttcagatcaagcagtaaaatatattagattgcct 26199368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 26199218 - 26199288
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||||| ||| |||||||   |||||||||||||||||||||||||||||||||| || |||||||||||    
T  26199218 aaaatatatcatattgagtacaaaaatatatcatattgagtacaaaaatatattatccagtacataaatat 26199288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 26319586 - 26319456
Alignment:
Q  122 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatatttt 221  Q
    ||||||||||| |||| ||||||  |||||||| | |||||||  | || |||||||| |||| |||| |||||||||| ||| ||  ||||||||||||    
T  26319586 tacaaaaatatttcaa-ttgagtaccaaaatatgttatattgaagaaaataatatatttttcagtacagaaatatattattgactactaaaatatatttt 26319488  T
Q  222 -agatcatgtactaaaatatattagattgcct 252  Q
     ||||||||  ||||||||||||| |||||||    
T  26319487 cagatcatgctctaaaatatattatattgcct 26319456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 52100700 - 52100601
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||  ||| ||||||| ||| ||| ||| ||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| ||||    
T  52100700 catcaactgtgt-tttcggtgtgttgaatgcattgtatgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagtaat 52100602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 23254654 - 23254515
Alignment:
Q  17 attttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattaga 116  Q
    ||||| |||||| ||| ||||| |||| |||||||||||| ||||||| || |  | ||||| |||||||| |||   | ||| ||| |   |||||| |    
T  23254654 atttttgtgtgtagaatgcactttgtgtgctctctatttatagagaaaatttataattaatatgtgagaaattttagaaacaagtaaatcaaatattaaa 23254555  T
Q  117 tctagtacaaaaatatctcaaattgagtctcaaaatatat 156  Q
    ||| |||||||||||||| |||||||||| ||||||||||    
T  23254554 tctggtacaaaaatatcttaaattgagtcccaaaatatat 23254515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 26319655 - 26319584
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactac 73  Q
    ||||||||||||||  ||||||||||  ||| ||| |||||||||||| |||||| ||||||||||| ||||    
T  26319655 aagcatcaactgtgttttttggtgtgaagaatgcattgtgtgagctctttatttatagagaaagttctctac 26319584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 14804319 - 14804380
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  14804319 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 14804380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 52100563 - 52100525
Alignment:
Q  158 atattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  52100563 atattgagtacaaaaatatattattcagtacataaatat 52100525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 2384592 - 2384464
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| ||||||  ||||| ||||||| |||||||||||||  |  ||||||||||||||||||| ||    
T  2384592 aaaatatatcatattgagtacaaaaatatat--tattcagtacatgaatatgttattcagtacataaatatatattcttgagtatcaaaatatatttcag 2384495  T
Q  224 atcatgtac--taaaatatattagattgcct 252  Q
    |||| | ||   |||||||||||||||||||    
T  2384494 atcaagcacgaaaaaatatattagattgcct 2384464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 26199217 - 26199272
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatat--tattcaatacataaatatatta 200  Q
    ||||||||||||||||||||||||||||||||  |||| | |||| ||||||||||    
T  26199217 caaaatatatcatattgagtacaaaaatatatcatattgagtacaaaaatatatta 26199272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 1067230 - 1067277
Alignment:
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattg 249  Q
    |||||| |||||||||||||||||||   |||||||||||||||||||    
T  1067230 tgagtaccaaaatatattttagatcaaagactaaaatatattagattg 1067277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 2 - 249
Target Start/End: Original strand, 27256849 - 27257096
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  27256849 aagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 27256948  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27256949 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattat 27257048  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattg 249  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  27257049 tgagtatcaaaatatatttcagatcatgtactaaaatattttagattg 27257096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 9650442 - 9650192
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| | | ||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||| |    
T  9650442 aagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagt 9650343  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9650342 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatactattcagtacataaatatattac 9650243  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  9650242 tgagtatcaaaatatatttcagatcatgtactaaaatttattagattgcct 9650192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 2 - 245
Target Start/End: Original strand, 8076662 - 8076906
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||| |    
T  8076662 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacatctaataagtgagaaactttgggagcaagt 8076761  T
Q  102 aattttcatattagatctagtacaaaa-atatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    ||||   |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  8076762 aattcatatattagatctagtacaaaaaatatctcaaattgagtttcaaaatatatcatattgagtacaaaaatatattattcagtacagaaatatatta 8076861  T
Q  201 ctgagtatcaaaatatattttagatcatgtactaaaatatattag 245  Q
     |||||||||| |||||||| ||||||||||||||||||||||||    
T  8076862 ttgagtatcaatatatatttcagatcatgtactaaaatatattag 8076906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 47102151 - 47102391
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||          |||||||||||||||||||||||| |||||| |    
T  47102151 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctattcaca----------actactaataagtgagaaactttgggagcaagt 47102240  T
Q  102 aattttcatattagatctagtacaaaaa-tatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    ||||   ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||    
T  47102241 aattcatatattagatctagtacaaaaaatatctcaaattgagtctcaaaata-atcatattgagtacaaaaatatattattcagtacagaaatatatta 47102339  T
Q  201 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
     |||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  47102340 ttgagtatcaatatatatttcaaatcatgtactaaaatatattagattgcct 47102391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 19640911 - 19641161
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| | ||||| ||  ||||| | ||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  19640911 aagcatcaactgtgaatttcggtgtatcgaaagaacaatgtgaacactctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 19641010  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    ||||  | | |||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||     
T  19641011 aattcacgtgttagatctagtacacaaatatttcaaattaagtatcaaaatatatcatattgagtccaaaaatatattattcagtacagaaatatattat 19641110  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||| ||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  19641111 tgaatatcaaaatatatttcagatcatgcactaaaatatattggattgcct 19641161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 40864845 - 40864615
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||| |    
T  40864845 aagcatcaactgtgaatttcggtgtatcgaaagtactgtgtgagctctctatttatagagaaagttcacaactaataagtgagtaactttgggagcaagt 40864746  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||                  ||||||||||     
T  40864745 aattctcatattagatttagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagcaaaaaa------------------aaatatattat 40864664  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  40864663 tgagtatcaaaatatatttcagatcatgtactaaaatattttagattgc 40864615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 14928118 - 14927869
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||  ||||||||| |||||  ||| || |||||||||||||||||||||  | ||| |    
T  14928118 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaactttggaaacaagt 14928019  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | ||||||||||||||| |||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  14928018 aatgcacctattagatctagtactaaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattat 14927920  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||||||||||| || | | |||| ||||||||||||||||||||||    
T  14927919 tgagtatcaaaatatagttcaaagcatgcactaaaatatattagattgcct 14927869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 15351584 - 15351335
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||  ||||||||| |||||  ||| || |||||||||||||||||||||  | ||| |    
T  15351584 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagtcctctatttatagagatggtttacaactaataagtgagaaactttggaaacaagt 15351485  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | ||||||||||||||| |||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  15351484 aatgcacctattagatctagtactaaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattat 15351386  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||||||||||| || | | |||| |||||||||||||| |||||||    
T  15351385 tgagtatcaaaatatagttcaaagcatgcactaaaatatattaaattgcct 15351335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 16459863 - 16459614
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| || || |||| || |||||||||||||||||||||  | ||| |    
T  16459863 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaactttggaaacaagt 16459764  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  || |||||||| ||||||  |||||||||| |||||  |||||||||||||||||||| |||  ||||||||||     
T  16459763 aatgcacctattagatctagtacttaagtatctcaa-ttgagtaccaaaatatattatattaggtacaaaaatatattattcagtactgaaatatattat 16459665  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||| ||||||| | | |||| ||||||||||||||||||||||    
T  16459664 tgagtatcaaagtatatttcaaagcatgcactaaaatatattagattgcct 16459614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 16580841 - 16581090
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| | |||||  || |||||||||||| || |||||||  | || |||| || | |||||||||||||||||||  | ||| |    
T  16580841 aagcatcaactgtgaatttcgttgtgtacaatgcactgtgtgagttccctatttattgggatagtttacaattaataagtgagaaactttggaaacaagt 16580940  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||   ||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  16580941 aatacacctattagatctagtacttaaatatctcaa-ttgagtactaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattat 16581039  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  16581040 tgagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcct 16581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 32302454 - 32302699
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| ||||||| ||| ||||  ||| || ||| |||||| ||||| |||| || |||||||||||||||| ||||  | ||| ||||    
T  32302454 catcaactgtgaatttcggtgtgtagaatgcaccatgtcagttctatatttatagagatagtttacaactaataagtgagaaattttggaaacaagtaat 32302553  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactga 204  Q
       | ||||||||| |||||  |||||||||||  |||||  |||||||||| ||||| ||||||||||||||||||||| | || |||||||||| |||    
T  32302554 gcacctattagatccagtacttaaatatctcaa--tgagtaccaaaatatattatattaagtacaaaaatatattattcagtgcagaaatatattattga 32302651  T
Q  205 gtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||    
T  32302652 gtatcaaaatatatttcaaagcatgtactaaaatatattagattgcct 32302699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 14259618 - 14259858
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||||||||    |||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  14259618 aagcatcaactgtgaatttcaaagtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 14259717  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||           |||||||||  ||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  14259718 aatgc---------atctagtacttaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattat 14259807  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  14259808 tgagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcct 14259858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 20488560 - 20488757
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  20488560 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 20488659  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  20488660 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatatta 20488757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 8954749 - 8954565
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||| |||||| || ||  |||| ||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| |    
T  8954749 aagcatcaactgggaatttcggggttcggaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttgggaacaagt 8954650  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||         ||||||||||||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  8954649 aattt---------atctagtacaaaaatatgtcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattatttagtacataaatat 8954565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 20485199 - 20485396
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || ||||||||||||||||||||   | ||| |    
T  20485199 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaacttttgaaacaact 20485298  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  20485299 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatatta 20485396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 18426543 - 18426736
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  18426543 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 18426642  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  18426643 cacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 18426736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 19096866 - 19097051
Alignment:
Q  2 aagcatcaactgtgaatttt-ggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaa 100  Q
    |||||||||||||||||||| || ||   ||| ||| ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| || |||     
T  19096866 aagcatcaactgtgaattttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgcgaacaag 19096965  T
Q  101 taattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||          || ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  19096966 taattc---------atttagtacaaaaatatctcaa-ttgagtatcaaaatatatcatattgagtacaaaaatatactattcagtacataaatat 19097051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 29727283 - 29727090
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaat----aagtgagaaactttgagagcaaa 100  Q
    ||||||||||||||||||||||   ||| |||| |||||||||||||||||| ||||||| ||||| ||||||    || ||||||||||||  | |||     
T  29727283 catcaactgtgaattttggtgtccagaatgcaccgtgtgagctctctatttatagagaaaattcacaactaattaacaaatgagaaactttgcaaacaag 29727184  T
Q  101 taattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||| |  |||||||| | |||||||||||||| || ||||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  29727183 taactcacatattaggtatagtacaaaaatatttc-aattgagtaccaaaatatattatattgagtacaaaaatatattattc-atacataaatat 29727090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 853222 - 853115
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaaatatattttagatcatgtactaaaatatatta 244  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||||| |||||| | | ||||||||||||    
T  853222 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcattaaaatatatta 853123  T
Q  245 gattgcct 252  Q
    ||||||||    
T  853122 gattgcct 853115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 1211226 - 1211119
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaaatatattttagatcatgtactaaaatatatta 244  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||||| |||||| | | ||||||||||||    
T  1211226 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcattaaaatatatta 1211127  T
Q  245 gattgcct 252  Q
    ||||||||    
T  1211126 gattgcct 1211119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 11017557 - 11017387
Alignment:
Q  8 caactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatttt 107  Q
    ||||||||||||| ||||  | ||| | |||| | || ||||||||||| | ||||| ||||| ||||||||||||||||||||||||  ||||||||      
T  11017557 caactgtgaatttcggtggatagaatgtactgcgcgacctctctatttatatagaaaattcacaactaataagtgagaaactttgaga-aaaataattca 11017459  T
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 180  Q
    |||||||||||||||  ||||||||||| ||||||||   ||||||||| ||||||||||| |||||||||||    
T  11017458 catattagatctagtgtaaaaatatctc-aattgagtactaaaatatattatattgagtaccaaaatatatta 11017387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 45169409 - 45169236
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| | |||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  45169409 atcaactgtgaatttcggtgtgtagaatgaactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 45169310  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 180  Q
      | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  45169309 cacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 45169236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 9008786 - 9008899
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatc 118  Q
    |||||||||||||| || || || |||||||||||||| ||||||| ||||| ||||||||||||||||||||| || |||||||||  ||||||| |||    
T  9008786 tttggtgtgtggaatgcgctatgagagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaaataattcacatattaaatc 9008885  T
Q  119 tagtacaaaaatat 132  Q
    || |||||||||||    
T  9008886 tattacaaaaatat 9008899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 845845 - 845734
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat------atattactgagtatcaaaatatattttagatcatgtactaaaatat 240  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||      |||||| ||||||||||||||||||| |||||| | | ||||||||    
T  845845 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatatatattattgagtatcaaaatatatttcagatcaagcattaaaatat 845746  T
Q  241 attagattgcct 252  Q
    ||||||||||||    
T  845745 attagattgcct 845734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 11247841 - 11247701
Alignment:
Q  40 tgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaat 139  Q
    |||||||||| |||||| ||||||| ||||| | ||| | ||||  ||||||| || |||||||||  ||||||| |||||||||||||||| |||||||    
T  11247841 tgtgagctctatatttatagagaaaattcacaattaacatgtga--aactttgggaacaaataattcacatattatatctagtacaaaaataactcaaat 11247744  T
Q  140 tgagtctcaaaatatatcatattgagtacaaaaatatattatt 182  Q
    |||   |||||||| || |||||||||||||||||||||||||    
T  11247743 tgaaaatcaaaatagattatattgagtacaaaaatatattatt 11247701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 846090 - 845848
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||  ||||||| || || | ||| ||| ||||||| ||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  846090 aagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagt 845991  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--t 199  Q
    ||||          || ||||||||||||||||||| ||||||   |||||||||  |||| |||||| |||||| |||||   |||||||||||||  |    
T  845990 aattc---------atttagtacaaaaatatctcaa-ttgagtacaaaaatatat--tattcagtacataaatatgttatttggtacataaatatatatt 845903  T
Q  200 actgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    | ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  845902 attgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 845848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 853467 - 853225
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||  ||||||| || || | ||| ||| ||||||| ||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  853467 aagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagt 853368  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--t 199  Q
    ||||          || ||||||||||||||||||| ||||||   |||||||||  |||| |||||| |||||| |||||   |||||||||||||  |    
T  853367 aattc---------atttagtacaaaaatatctcaa-ttgagtacaaaaatatat--tattcagtacataaatatgttatttggtacataaatatatatt 853280  T
Q  200 actgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    | ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  853279 attgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 853225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 1211471 - 1211229
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||  ||||||| || || | ||| ||| ||||||| ||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  1211471 aagcatcaaccatgaatttcggggtctagaatgcattgtgtgaactctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagt 1211372  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--t 199  Q
    ||||          || ||||||||||||||||||| ||||||   |||||||||  |||| |||||| |||||| |||||   |||||||||||||  |    
T  1211371 aattc---------atttagtacaaaaatatctcaa-ttgagtacaaaaatatat--tattcagtacataaatatgttatttggtacataaatatatatt 1211284  T
Q  200 actgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    | ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  1211283 attgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 1211229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 36477589 - 36477759
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||       || ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| |  |||||    
T  36477589 aagcatcaactgtgaatttcggtgtg-------cattgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttggggacaaat 36477681  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaataca 189  Q
    ||||          || ||||||||||||||| ||| ||| ||  ||||||||||||||||||||||||||||||||||| |||||||    
T  36477682 aattc---------atttagtacaaaaatatcacaa-ttgtgtaccaaaatatatcatattgagtacaaaaatatattatgcaataca 36477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 838689 - 838578
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat------atattactgagtatcaaaatatattttagatcatgtactaaaatat 240  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||      |||||| ||||||||||||||||||| ||||||   | ||||||||    
T  838689 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatatatattattgagtatcaaaatatatttcagatcaaacattaaaatat 838590  T
Q  241 attagattgcct 252  Q
    ||||||||||||    
T  838589 attagattgcct 838578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 1203869 - 1203758
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat------atattactgagtatcaaaatatattttagatcatgtactaaaatat 240  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||      |||||| ||||||||||||||||||| ||||||   | ||||||||    
T  1203869 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatatatattattgagtatcaaaatatatttcagatcaaacattaaaatat 1203770  T
Q  241 attagattgcct 252  Q
    ||||||||||||    
T  1203769 attagattgcct 1203758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 40998224 - 40998128
Alignment:
Q  148 aaaatatatcatattgagtacaaaa-atatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatatt 243  Q
    ||||||||||| ||||||||||||| |||||||||| |||| | |||||||||| |||| ||||||||||||||||||||| |||| ||||||||||    
T  40998224 aaaatatatcaaattgagtacaaaagatatattattgaataaacaaatatattattgagaatcaaaatatattttagatcaagtaccaaaatatatt 40998128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 10488673 - 10488602
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    |||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  10488673 catattagatttagtagaaaaatatctcaaattgagtaccaaaatatatcatattgagtacaaaaatatatt 10488602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 838788 - 838692
Alignment:
Q  160 attgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaa--atatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||||||||| |||||||||  |||||| |||||||||||  |||||||| |||||| | ||||||||||||||||||||||    
T  838788 attgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 838692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 1203968 - 1203872
Alignment:
Q  160 attgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaa--atatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||||||||| |||||||||  |||||| |||||||||||  |||||||| |||||| | ||||||||||||||||||||||    
T  1203968 attgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 1203872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 250
Target Start/End: Original strand, 11297413 - 11297610
Alignment:
Q  50 ctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaa 149  Q
    ||||||| |||||||  |||| ||||||| ||||||||||||| || ||| |||||  ||||||||||||||||||||||||| | ||||| |||  | |    
T  11297413 ctatttatagagaaaaatcacaactaatatgtgagaaactttgtgaacaagtaattcacatattagatctagtacaaaaatattttaaattcagt-acca 11297511  T
Q  150 aatatatcatattgagtacaaaa-atatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    |||| |||||||||||||||||| ||| ||| || | |  | |||||||||| |||||  |||||||||| |   ||||||||| |||||||||||||||    
T  11297512 aatagatcatattgagtacaaaatataaatt-ttgagt--aaaaatatattattgagtgccaaaatatatgtgtaatcatgtacgaaaatatattagatt 11297608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 15565640 - 15565705
Alignment:
Q  116 atctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| || |||||||||||||||    
T  15565640 atctagtacaaaaatatctcaaattgagtaccaaaatatatcatattaagaacaaaaatatattat 15565705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 250
Target Start/End: Original strand, 9008903 - 9008995
Alignment:
Q  158 atattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    |||| |||||||||||||||||||||| || | |||||||||| ||| |||||||||||||||  ||| ||| | ||||||||||||||||||    
T  9008903 atatggagtacaaaaatatattattcagtaaagaaatatattattgactatcaaaatatatttctgattatgcattaaaatatattagattgc 9008995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 7838802 - 7838868
Alignment:
Q  109 atattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatat 176  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||||||||    
T  7838802 atattagatctagtacaaaaatatctcaaattgagtaccaaattatatcatattg-gtacaaaaatat 7838868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 44784004 - 44784136
Alignment:
Q  46 ctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtc 145  Q
    |||||| |||||||||||| |||| |||||||| || |||||||||| || ||| || ||  |||||||||| ||||||| | ||||||||||||||||     
T  44784004 ctctctgtttacagagaaaattca-tactaatacgttagaaactttgggaacaagta-ttcacatattagatttagtacagatatatctcaaattgagta 44784101  T
Q  146 tcaaaatatatcatattgagtacaaaaatatattat 181  Q
      |||||||||||||| |||||| ||||||||||||    
T  44784102 ctaaaatatatcatatcgagtac-aaaatatattat 44784136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 7838857 - 7838935
Alignment:
Q  121 gtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatt 199  Q
    |||||||||||||| |||||||||  |||||||||||||||||  ||||||||||||||||| | |||| |||||||||    
T  7838857 gtacaaaaatatcttaaattgagtaccaaaatatatcatattggatacaaaaatatattattgagtacaaaaatatatt 7838935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 19097135 - 19097261
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || | ||||||||||||||||| ||    
T  19097135 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattcagtatcaaaatatatttcag 19097232  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    ||||   ||||||||||||||||||||||    
T  19097233 atcaaacactaaaatatattagattgcct 19097261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 19097134 - 19097183
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19097134 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 19097183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 23866651 - 23866712
Alignment:
Q  191 aaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  23866651 aaatatattattgagtatcaaaatatatctcagattatgtactaaaatatattagattgcct 23866712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 1043873 - 1043985
Alignment:
Q  44 agctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgag 143  Q
    |||||| |||||| ||||||| ||||| | ||||| |||||||||||||  | ||| |||||  | ||||||||||||||||||||||||||  ||||||    
T  1043873 agctctttatttatagagaaaattcacaattaatatgtgagaaactttggaaacaagtaattcacgtattagatctagtacaaaaatatctcgcattgag 1043972  T
Q  144 tctcaaaatatat 156  Q
    |  ||||||||||    
T  1043973 taccaaaatatat 1043985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 10499569 - 10499401
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgag-------agcaaataattttcata 111  Q
    |||||||||||||| |||||    ||| |||||||||| ||||||| ||||| ||||||||||||||||||||| |       |  |  |||||  ||||    
T  10499569 tttggtgtgtggaatgcactaccagagttctctatttatagagaaaattcacaactaataagtgagaaactttggggtttgggattaggtaattcacata 10499470  T
Q  112 ttagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||| ||||||||||||||||| |||| |||  |||||||||| || ||||||| |||||||||||||    
T  10499469 ttagatttagtacaaaaatatctc-aattaagtaccaaaatatattatgttgagtaaaaaaatatattat 10499401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 10504598 - 10504430
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgag-------agcaaataattttcata 111  Q
    |||||||||||||| |||||    ||| |||||||||| ||||||| ||||| ||||||||||||||||||||| |       |  |  |||||  ||||    
T  10504598 tttggtgtgtggaatgcactaccagagttctctatttatagagaaaattcacaactaataagtgagaaactttggggtttgggattaggtaattcacata 10504499  T
Q  112 ttagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||| ||||||||||||||||| |||| |||  |||||||||| || ||||||| |||||||||||||    
T  10504498 ttagatttagtacaaaaatatctc-aattaagtaccaaaatatattatgttgagtaaaaaaatatattat 10504430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 11289418 - 11289353
Alignment:
Q  117 tctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattatt 182  Q
    ||||||||||||||| ||||||| || | | ||||||||| |||||||||||||||||||||||||    
T  11289418 tctagtacaaaaataactcaaatcgaatataaaaatatattatattgagtacaaaaatatattatt 11289353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 1043985 - 1044053
Alignment:
Q  113 tagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||||||||||||||||| ||| |||||||  ||||| |||| ||||||||| ||||||||||||||    
T  1043985 tagatctagtacaaaaatatttcatattgagtaccaaaagatattatattgagtgcaaaaatatattat 1044053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 838914 - 838811
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||| |||||||| || ||   ||| ||| ||||||||||||||||||| ||||||| ||| | ||||||| ||||||||||||| || ||| |    
T  838914 aagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaataggtgagaaactttgggaacaagt 838815  T
Q  102 aatt 105  Q
    ||||    
T  838814 aatt 838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 1204094 - 1203991
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||| |||||||| || ||   ||| ||| ||||||||||||||||||| ||||||| ||| | ||||||| ||||||||||||| || ||| |    
T  1204094 aagcatcaaccgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcgcaactaataggtgagaaactttgggaacaagt 1203995  T
Q  102 aatt 105  Q
    ||||    
T  1203994 aatt 1203991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 10532186 - 10532114
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||||||||||||||||||||||||| |||| |||  |||||||||| || ||||||| |||| ||||||||    
T  10532186 catattagatctagtacaaaaatatctc-aattaagtaccaaaatatattatgttgagtaaaaaactatattat 10532114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 10532298 - 10532225
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    |||||||||||||| |||||  ||||  |||||| ||| ||||||| ||||| |||||||||||||||||||||    
T  10532298 tttggtgtgtggaatgcactacgtgaattctctacttatagagaaaattcacaactaataagtgagaaactttg 10532225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 13343782 - 13343710
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||||||||||||||||||||||||| |||| |||  |||||||||| || ||||||| |||||| ||||||    
T  13343782 catattagatctagtacaaaaatatctc-aattaagtaccaaaatatattatgttgagtaaaaaaatctattat 13343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 8954546 - 8954485
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  8954546 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 8954485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 11247285 - 11247323
Alignment:
Q  146 tcaaaatatatcatattgagtacaaaaatatattattca 184  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  11247285 tcaaaatatatcatattgagtacaaaattatattattca 11247323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 19097070 - 19097131
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  19097070 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 19097131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 40998103 - 40998011
Alignment:
Q  160 attgagtacaaaa-atatattat--tcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||| |||||||||  | | |||| ||||||||||||||| ||||||||||||||||||| |  |||| ||||||||| ||||||    
T  40998103 attgagtacaaaagatatattatattgagtacaaaaatatattactgag-atcaaaatatattttagattaaatacttaaatatattcgattgc 40998011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 11265837 - 11265902
Alignment:
Q  117 tctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattatt 182  Q
    |||||||| |||||| ||||||| || | | |||||||||||||||||||| | ||||||||||||    
T  11265837 tctagtaccaaaataactcaaatagaatataaaaatatatcatattgagtatataaatatattatt 11265902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 11288914 - 11288959
Alignment:
Q  137 aattgagtctcaaaatatatcatattgagtacaaaaatatattatt 182  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||    
T  11288914 aattgaatatcaaaatatatcatattgagtacaaaattatattatt 11288959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 11296715 - 11296760
Alignment:
Q  137 aattgagtctcaaaatatatcatattgagtacaaaaatatattatt 182  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||    
T  11296715 aattgaatatcaaaatatatcatattgagtacaaaattatattatt 11296760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 36477776 - 36477843
Alignment:
Q  186 tacataaatatattactgagtatcaaaa---tatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||| || |||||||||   ||||||| |||||| | ||||||||||||||||||||    
T  36477776 tacataaatatattattgtgtatcaaaaaaatatatttcagatcaagcactaaaatatattagattgc 36477843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 11266343 - 11266284
Alignment:
Q  137 aattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||| | |||||||||||||||||||||| |||| ||||||||| | |||| ||||||    
T  11266343 aattgaatatcaaaatatatcatattgagtataaaattatattattgagtacaaaaatat 11266284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 18385247 - 18385300
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatat--tattcaatacataaatatatt 199  Q
    |||||||||||||||||| |||||||||||||  ||||||||||| |||||||||    
T  18385247 caaaatatatcatattgattacaaaaatatattatattcaataca-aaatatatt 18385300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 47342409 - 47342355
Alignment:
Q  127 aaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||||| |||||| |||  |||||||||| ||||||||| ||||||||||||||    
T  47342409 aaatatcacaaattaagtaccaaaatatattatattgagtgcaaaaatatattat 47342355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 11017387 - 11017354
Alignment:
Q  148 aaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||||||| ||||||||||||||||||||||||    
T  11017387 aaaatatattatattgagtacaaaaatatattat 11017354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 11289345 - 11289292
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    |||||||||||||||  ||  |||||||||| ||||||| ||||||||||||||    
T  11289345 aaaatatctcaaattaggtaccaaaatatattatattgactacaaaaatatatt 11289292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 13343894 - 13343821
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    |||||||||||||| ||| |   |||| || ||||||| ||||||| ||||| ||||||||| |||||||||||    
T  13343894 tttggtgtgtggaatgcattacctgagttcactatttatagagaaaattcacaactaataagagagaaactttg 13343821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 18385991 - 18385891
Alignment:
Q  80 gtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    |||||||| ||||||| ||||| ||||  |||||| |||  |||||||||||  | ||| |||||  ||||| ||||||||| | |||||||||||||||    
T  18385991 gtgagaaattttgagaacaaatcatttggatattaaatcatgtacaaaaatactttaaactgagtaccaaaa-atatcatatggtgtacaaaaatatatt 18385893  T
Q  180 at 181  Q
    ||    
T  18385892 at 18385891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 11247350 - 11247382
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatatt 179  Q
    ||||||| |||||||||||||||||||||||||    
T  11247350 caaaatacatcatattgagtacaaaaatatatt 11247382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 13346633 - 13346593
Alignment:
Q  210 aaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||  || ||||||||||||||||||||    
T  13346633 aaaatatattttagattgtgcactaaaatatattagattgc 13346593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 13521467 - 13521217
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| | | ||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||| |    
T  13521467 aagcatcaactgtgaatttcgatttgtggaatgcactgtgtgagctctctatttatagataaagttcacaactaataagtgagaaactttgggagcaagt 13521368  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13521367 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcattacataaatatattac 13521268  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  13521267 tgagtatcaaaatatatttcagatcatgtactaaaatttattagattgcct 13521217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 34561036 - 34561284
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  34561036 aagcatcaactgtgaatttcggtgtatcgaaagcactatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 34561135  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34561136 aattctcatattaaatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattat 34561235  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  34561236 tgagtatcaaaatatatttcagatcatgtactaaaatattttagattgc 34561284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 31297977 - 31297731
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaa- 100  Q
    ||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||     
T  31297977 aagcatcaattgtgaatttcggtgtatggaatgcactgtgtgagctctctatttatagagagagttcacaactaataagtgagaaactttgggagcaaag 31297878  T
Q  101 taattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  31297877 taattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcacattgagtacaaaaatatattattcagtacataaatatatta 31297778  T
Q  201 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
     ||||||||||||||||||    |||||||||||||||||||||||||||    
T  31297777 ttgagtatcaaaatatatt---aatcatgtactaaaatatattagattgc 31297731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 7902593 - 7902347
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  7902593 aagcatcaaatgtgaatttcggtgtgtgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 7902494  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | |||| ||||||||||     
T  7902493 aattctcatattagatctagtataaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaatatattat 7902396  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||| ||||||||||||||| |||||||| ||||||||||||||||||||    
T  7902395 tgactatcaaaatatatttcagatcatgcactaaaatatattagattgc 7902347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 234
Target Start/End: Original strand, 41817394 - 41817639
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagag-------------aaagttcactactaataagtgagaaac 88  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||             ||||||||| |||||||||||||||||    
T  41817394 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagctctctatttacagagaagctctctagagaaagttcacaactaataagtgagaaac 41817493  T
Q  89 tttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatac 188  Q
    |||| |||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||     
T  41817494 tttgggagcaagtaattctcatattagatctagtacaaaaacatctcaaatcgagtctcaaaatatatcatattgagtacaaaaatatattattcagtaa 41817593  T
Q  189 ataaatatattactgagtatcaaaatatattttagatcatgtacta 234  Q
    | ||||||||||  |||||||||||||||||| |||||||| ||||    
T  41817594 agaaatatattatcgagtatcaaaatatatttcagatcatgcacta 41817639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 3997544 - 3997303
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||||| |||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  3997544 aagcatcaactgtgaatttcggtgtgtgtaaagcaatatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 3997445  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||   ||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||  ||||||||||| | |||  ||||||||||     
T  3997444 aattctca---tagatctagtacaaaaatatctcaaattgagtctcaaaatatat--tattcaatacatgaatatattattgactacggaaatatattat 3997350  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    ||| ||||||||||||||| |||||||  ||||||||||||||||||    
T  3997349 tgactatcaaaatatatttcagatcatacactaaaatatattagatt 3997303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 15225777 - 15226017
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  15225777 aagcatcaactgtgaatttcggtgtgtagaatgcactctgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagt 15225876  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    ||||          || ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  15225877 aattc---------atttagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatattat 15225966  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||||||||||| || | | |||| ||||||||||||||||||||||    
T  15225967 tgagtatcaaaatatagttcaaagcatgcactaaaatatattagattgcct 15226017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 47575276 - 47575455
Alignment:
Q  4 gcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataa 103  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||| || |||||| |||    
T  47575276 gcatcaactttgaatttcggtgtgtggaatgcactgtgtgagctctctttttatagagaaaattcacaactaataagtgagaaactatg-gagcaagtaa 47575374  T
Q  104 ttttcatattagatctagtacaaaa-atatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattc 183  Q
    ||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47575375 ttcatatattagatctagtacaaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattc 47575455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 15011298 - 15011081
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||||  || |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  15011298 aagcatcaactgtgaatttcggtgtgtataatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 15011199  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  15011198 aatgcacctattagatctagtacttaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattat 15011100  T
Q  202 tgagtatcaaaatatattt 220  Q
    |||||||||||||||||||    
T  15011099 tgagtatcaaaatatattt 15011081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 39320210 - 39320423
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatttt-catattagatctagtacaaaaatatctca 136  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||| |||| || ||| |||  |  |||| || |||| |||||||||||||||     
T  39320210 tgtgtgagctctctatttatagtgaaagttcacaactaataagtgagaaa-tttgggaacaagtaaactcacataatatatct-gtacaaaaatatctct 39320307  T
Q  137 aattgagtctcaaaatatatcatatt-gagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaa 235  Q
     ||||||| ||||||||||||| ||| |||||||||||||||||||||| || |||||| ||||| ||||||||||||||||||| |||||||| |||||    
T  39320308 tattgagtatcaaaatatatcaaattcgagtacaaaaatatattattcagtaaataaat-tattattgagtatcaaaatatatttcagatcatgcactaa 39320406  T
Q  236 aatatattagattgcct 252  Q
    |||||||||||||||||    
T  39320407 aatatattagattgcct 39320423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 8660885 - 8660726
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||| | |||||||  |  ||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| || |||||    
T  8660885 aagcatcaactgtgaatctcggtgtgtatactgcactgtgtgagctctctatttacagagaaaattcactactaataagtgaagaactttgggaacaaat 8660786  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatatt 162  Q
    |||||||||||||||||||||||||||||||||| ||||||||   ||||||||| |||||    
T  8660785 aattttcatattagatctagtacaaaaatatctc-aattgagtacaaaaatatattatatt 8660726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 14891545 - 14891438
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaaatatattttagatcatgtactaaaatatatta 244  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||||| |||||| | ||||||||||||||    
T  14891545 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatttaagatcaagcactaaaatatatta 14891446  T
Q  245 gattgcct 252  Q
    ||||||||    
T  14891445 gattgcct 14891438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 10713552 - 10713749
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| |||||   || || |||||| ||||||||||||||  | ||| |    
T  10713552 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaactttggaaacaagt 10713651  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  10713652 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 10713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 10927322 - 10927519
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| |||||   || || |||||| ||||||||||||||  | ||| |    
T  10927322 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatgatttacaactaatgagtgagaaactttggaaacaagt 10927421  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  10927422 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 10927519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 12488414 - 12488607
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  12488414 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 12488513  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||   ||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  12488514 cacctattagatctagtaattaaatatatc-aattgagtacaaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 12488607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 9185163 - 9184928
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||| ||||||| || ||   ||| ||| ||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||| || ||| ||||    
T  9185163 catcaactctgaatttcggggtccagaatgcattgtgtgagctctctatttgtagagaaatttcacaactaataagtgagaaactttgggaacaagtaat 9185064  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactga 204  Q
    |          || ||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| | |    
T  9185063 tc---------atttagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacgaaaatatattattcagtacataaatatgttattca 9184974  T
Q  205 gtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||   |||||||| ||  ||   | ||||||||||||||||||||||    
T  9184973 gtacataaatatatatt--attgagcactaaaatatattagattgcct 9184928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 9190995 - 9190825
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaa 137  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||| || ||| |||||          || |||||||||||||||||||    
T  9190995 tgtgtgagctctctatttgtagagaaatttcacaactaataagtgagaaactttgggaacaagtaattc---------atttagtacaaaaatatctcaa 9190905  T
Q  138 attgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatat 218  Q
     ||||||  |||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||| | |||||  ||||||||    
T  9190904 -ttgagtaccaaaatgtatcatattgagtacgaaaatatattattcagtacataaatatgttattcagtatataaatatat 9190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 14899095 - 14898914
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || ||   ||| ||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||| || ||| ||||    
T  14899095 catcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaacaagtaat 14898996  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtct--caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||         |||||||||||||||||  ||| |   ||||   ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14898995 tt---------atctagtacaaaaatatgccaact---gtctacaaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 14898914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 14868547 - 14868366
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || ||   ||| ||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||| ||  || ||||    
T  14868547 catcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaagaagtaat 14868448  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||         |||||||||||||||||  | |||||  |   ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14868447 tt---------atctagtacaaaaatat-gccaattgtctacaaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 14868366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 14898587 - 14898478
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaa--atatattttagatcatgtactaaaatatat 242  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||  |||||||| ||||||   ||||||||||||    
T  14898587 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaaacactaaaatatat 14898488  T
Q  243 tagattgcct 252  Q
    ||||||||||    
T  14898487 tagattgcct 14898478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 14898831 - 14898722
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaa--atatattttagatcatgtactaaaatatat 242  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||  |||||||| ||||||   ||||||||||||    
T  14898831 caaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaaacactaaaatatat 14898732  T
Q  243 tagattgcct 252  Q
    ||||||||||    
T  14898731 tagattgcct 14898722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 52742690 - 52742527
Alignment:
Q  18 ttttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagat 117  Q
    ||||| ||||||||| | ||| ||||||||||||||||| ||||||| || || ||||||| | |||||| ||||| |  || |||||  | ||||||||    
T  52742690 ttttgatgtgtggaatgaactatgtgagctctctatttatagagaaaattgacaactaatacgcgagaaattttgaaaataagtaattcacgtattagat 52742591  T
Q  118 ctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||| |||||||| |||||||||||  |||||||| ||||||||||||||||| ||| ||||    
T  52742590 ctagtagaaaaatatatcaaattgagtaccaaaatatgtcatattgagtacaaaagtattttat 52742527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 14953533 - 14953349
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  14953533 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac---------aagtaatg 14953443  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  14953442 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 14953349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 25690610 - 25690794
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || |  |||||||||||||||||         || ||||     
T  25690610 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac---------aagtaatg 25690700  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  25690701 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 25690794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 26034936 - 26035062
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| ||||||| | |||||||||  |||| |||||| |||||| ||||||  |||||||||||||  || ||||||||||||||||||| ||    
T  26034936 aaaatatatcatattgagtataaaaatatat--tattcagtacataaatatgttattcggtacataaatatatattattgagtatcaaaatatatttcag 26035033  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| ||||||||||||||||||||||||    
T  26035034 atcaagtactaaaatatattagattgcct 26035062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 14877387 - 14877568
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || ||   ||| ||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||| ||  || ||||    
T  14877387 catcaactgtgaatttcggggtccagaatgcactgtgtgagctctctatttatagagaaacttcacaactaataaatgagaaactttgggaagaagtaat 14877486  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtct--caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||         |||||||||||||||||  ||| |   ||||   ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  14877487 tt---------atctagtacaaaaatatgccaact---gtctacaaaaatatatcatattgagtacaaaaatatattatttagtacataaatat 14877568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 14868150 - 14868024
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  14868150 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttaag 14868053  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  14868052 atcaagcactaaaatatattagattgcct 14868024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 26034836 - 26034984
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaa 137  Q
    ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |||||          || |||||||||||||| ||||    
T  26034836 tgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaattc---------atttagtacaaaaatatgtcaa 26034926  T
Q  138 attgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
     |||  |  ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  26034927 -ttgtctaccaaaatatatcatattgagtataaaaatatattattcagtacataaatat 26034984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 252
Target Start/End: Complemental strand, 14868418 - 14868286
Alignment:
Q  122 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatatt 219  Q
    ||||||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || |||||||||||||||||     
T  14868418 tacaaaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatata 14868321  T
Q  220 tt--agatcatgtactaaaatatattagattgcct 252  Q
    ||  |||||| | ||||||||||||||||||||||    
T  14868320 tttcagatcaagcactaaaatatattagattgcct 14868286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 3309979 - 3310035
Alignment:
Q  125 aaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  3309979 aaaaatatctcaatttgaggctcaaaatatatcatattgagtacaaaaatatattat 3310035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 250
Target Start/End: Original strand, 14877516 - 14877646
Alignment:
Q  122 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatatt 219  Q
    ||||||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || |||||||||||||||||     
T  14877516 tacaaaaatatatcatattgagtacaaaaatatat--tatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatata 14877613  T
Q  220 tt--agatcatgtactaaaatatattagattgc 250  Q
    ||  |||||| | ||||||||||||||||||||    
T  14877614 tttcagatcaagcactaaaatatattagattgc 14877646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 14868151 - 14868102
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14868151 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 14868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 14868282 - 14868154
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatatttt-- 221  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||| ||      
T  14868282 aaaatatatcatattgagtacaaaaatatat--tatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatatttc 14868185  T
Q  222 agatcatgtactaaaatatattagattgcct 252  Q
    |||||| | ||||||||||||||||||||||    
T  14868184 agatcaagcactaaaatatattagattgcct 14868154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 14898475 - 14898426
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14898475 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 14898426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 14898719 - 14898670
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14898719 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 14898670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 14898718 - 14898592
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatatttt-- 221  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||| ||      
T  14898718 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatatttc 14898621  T
Q  222 agatcatgtactaaaatatattagattgc 250  Q
    |||||| | ||||||||||||||||||||    
T  14898620 agatcaagcactaaaatatattagattgc 14898592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 14868284 - 14868234
Alignment:
Q  146 tcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  14868284 tcaaaatatatcatattgagtacaaaaatatattatttagtacataaatat 14868234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 42314893 - 42314838
Alignment:
Q  191 aaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattaga 246  Q
    |||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||    
T  42314893 aaatatattattgagtatcaaaatatatttcagatcacgtaccaaaatatattaga 42314838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 1150797 - 1150667
Alignment:
Q  46 ctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtc 145  Q
    ||||||||||| ||||||| ||||| | || |  |||||| |||||| || ||| | |||  |||||||||| | ||||||||||||||||||||||||     
T  1150797 ctctctatttatagagaaaattcacaagtactttgtgagacactttgggaacaagtgattcacatattagat-tggtacaaaaatatctcaaattgagt- 1150700  T
Q  146 tcaaaatatatcatattgagtacaaaaatatat 178  Q
      ||||||||| ||||||||||| | |||||||    
T  1150699 aaaaaatatattatattgagtaccataatatat 1150667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 9190828 - 9190767
Alignment:
Q  193 atatattactgagtatcaaaatata--ttttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||  ||| |||||| | ||||||||||||||||||||||    
T  9190828 atatattattgagtatcaaaatatacatttcagatcaagcactaaaatatattagattgcct 9190767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 14891609 - 14891548
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  14891609 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 14891548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 14898912 - 14898836
Alignment:
Q  178 ttattcaatacataaatatat--tactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgc 250  Q
    ||||||| |||||||||||||  || ||||||||||||||||| ||  |||||| | ||||||||||||||||||||    
T  14898912 ttattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgc 14898836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 43477366 - 43477298
Alignment:
Q  111 attagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||||||||||||||||||||||| |||||| |  |||||||||  ||||||||||| ||||||||||||    
T  43477366 attagatctagtacaaaaatatctc-aattgaataccaaaatatactatattgagtac-aaaatatattat 43477298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 12383618 - 12383582
Alignment:
Q  146 tcaaaatatatcatattgagtacaaaaatatattatt 182  Q
    ||||||| |||||||||||||||||||||||||||||    
T  12383618 tcaaaatttatcatattgagtacaaaaatatattatt 12383582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 26188028 - 26187959
Alignment:
Q  98 aaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac 168  Q
    ||||||||  |||||||||||||||| |||||||||||  || ||||  ||| ||||||||||||||||||    
T  26188028 aaataattcacatattagatctagtataaaaatatctc-gatcgagtgccaagatatatcatattgagtac 26187959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 32545620 - 32545665
Alignment:
Q  110 tattagatctagtacaaaaatatctcaaattgagtctcaaaatata 155  Q
    ||||| ||||||| ||||||||||||||||| ||| ||||||||||    
T  32545620 tattaaatctagttcaaaaatatctcaaatttagtatcaaaatata 32545665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 10160202 - 10159950
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||| || |    
T  10160202 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttgtagagaaagttcacaactaataagtgagaaactttgggagtaagt 10160103  T
Q  102 aattttcatattagatctagtacaaaaa-tatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  10160102 aattctcatattagatctagtacaaaaaatatctcaaattgagtctcaaaatatatcatattgagtataaaaatatattattcagtacagaaatatatta 10160003  T
Q  201 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10160002 ctgagtatcaaaatatattttagatcatgtactaaaatatattagattgcctt 10159950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 6297374 - 6297128
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||||||||  |||| | ||||| ||||||||||||||||||||  |||||||||| || |||||||||||| |||||||| ||||||      
T  6297374 aagcatcaactgtgaatttctgtgtatagaaagaactgtgtgagctctctatttt-agagaaagttgacaactaataagtgataaactttgggagcaagc 6297276  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||     
T  6297275 aattctcatattagatctagtacaaaagtatctcaaattgagtctcaaaatatatcatattgagtac-aaaatatattattcaatacagaaatatattat 6297177  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
     |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  6297176 cgagtatcaaaatatatttcagatcatgtactaaaatattttagattgc 6297128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 5 - 248
Target Start/End: Original strand, 28855746 - 28855987
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| ||||||| ||| ||||| ||||||||||||||||| || |||| ||||| |||||||| ||||||||||||  ||||| ||||    
T  28855746 catcaactgtgaatttcggtgtgtcgaatgcactttgtgagctctctatttatagggaaa-ttcacaactaataaatgagaaactttggaagcaagtaat 28855844  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactga 204  Q
    | ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| |||    
T  28855845 tctcatattagatctagtacaaaaatatctcaacttgagtatcaaaatatatcatattgagtac-aaaatatattattcagtgcataaatatattattga 28855943  T
Q  205 gtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  28855944 gtatcaaaatatatttcagatcatgtactaaaatatattagatt 28855987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 30658789 - 30658979
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||||||||  || ||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||         
T  30658789 aagcatcaactgtgaatttgtgtatgtggaatgcactgtgtgagctctctatttatggagaaagttcacaactaataagtgagaaactttgggag----- 30658883  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat 198  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||    
T  30658884 -attatcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtataaaaatatattattcagtacagaaatatat 30658979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 17453056 - 17452819
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcacta-----ctaataagtgagaaactttgagagcaaataattttcatatt 113  Q
    |||||||||||||| | ||| |||||| |||||||||| ||||||| || || |     |||||||||||||||||||| || ||| |||||  ||| ||    
T  17453056 tttggtgtgtggaatgtactatgtgagatctctatttatagagaaaatttacaactaatctaataagtgagaaactttgggaacaagtaattcacatgtt 17452957  T
Q  114 agatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaa 213  Q
    | |||||||||||||||||||| ||||||||  |||||||||| |||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||    
T  17452956 atatctagtacaaaaatatctc-aattgagtaccaaaatatattatattgagtagaaaaatatattattcagtacataaatatattattgactatcaaaa 17452858  T
Q  214 tatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||| ||| |||| || |||||||||||||||||||    
T  17452857 tatatttcagaccatgcacaaaaatatattagattgcct 17452819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 9785762 - 9786007
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||||  || ||||||||  || |||||||||| || || |||| || |||||||||||||||||||||  | ||| |    
T  9785762 aagcatcaactgtgaatttcggtgtgtaaaatgcactgtg--agttctctatttatagggatagtttacaactaataagtgagaaactttggaaacaagt 9785859  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||   ||||||||| ||||| |||||||||||| |||||||| |||| ||||||||||     
T  9785860 aatgcacctattagatctagtacttaaatatctcaa-ttgagtactaaaatatattatattaagtacaaaaatacattattcagtacagaaatatattat 9785958  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    | ||||||||||||||||| | | |||| ||||||||||||||||||||    
T  9785959 taagtatcaaaatatatttcaaagcatgcactaaaatatattagattgc 9786007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 194
Target Start/End: Original strand, 25375504 - 25375692
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    ||||||||||||||||  |||||| ||| ||||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| ||||    
T  25375504 catcaactgtgaatttcagtgtgtagaatgcactgtgtaagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaat 25375603  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaat 194  Q
    |  |||||||||||||||||||| ||||||| | ||||||  |||||| ||| ||||||||||| |||||| |||||||| |||||||||    
T  25375604 tcacatattagatctagtacaaatatatctc-agttgagtaccaaaatctattatattgagtaccaaaatacattattcagtacataaat 25375692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 7559833 - 7559639
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaat-aagtgagaaactttgagagcaaa 100  Q
    |||||||||||||||||||  ||||   ||| ||| ||||||||||||||||||| ||||||| ||||| |||||| ||  ||||||||||  ||||||     
T  7559833 aagcatcaactgtgaatttaagtgtccagaatgcattgtgtgagctctctatttatagagaaaattcacaactaataaaaagagaaactttacgagcaag 7559734  T
Q  101 taattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||  ||||| ||||||||||||||||||| || ||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7559733 taattcacatatcagatctagtacaaaaatatttc-aattgtgtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 7559639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 22845046 - 22845188
Alignment:
Q  34 gcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatc 133  Q
    ||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| |||||  ||||||||||||||||||||||||||    
T  22845046 gcactatgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttgggaacaagtaattcacatattagatctagtacaaaaatatc 22845145  T
Q  134 tcaaattgagtctcaaaatatatcatattgagtacaaaaatata 177  Q
    || ||||||||  |||||||||| ||||||||||||||||||||    
T  22845146 tc-aattgagtaccaaaatatattatattgagtacaaaaatata 22845188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 26897239 - 26897481
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || ||   ||| ||| ||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  26897239 aagcatcaactgtgaatttcggagtccagaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagt 26897338  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataa--atatatt 199  Q
    ||||          ||||| |||||||||||  ||| ||   |  |||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  26897339 aattc---------atctaatacaaaaatatgccaa-ttatctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatatatt 26897428  T
Q  200 actgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    | ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  26897429 attgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcct 26897481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 42248839 - 42249082
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||| |||| |||| ||||||| ||| ||| ||||||||| ||||||||| ||||||| |||   ||||||| |||||||||||||  | ||| |    
T  42248839 aagcatcaattgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttccgaactaataggtgagaaactttggaaacaagt 42248938  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaa-tacataaatatat-- 198  Q
    ||||          |||||||||||||||||  ||| |||  |  ||||||||||||||||||||||||||||||||||||||| |||||||||||||      
T  42248939 aattc---------atctagtacaaaaatatgccaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcaagtacataaatatatat 42249028  T
Q  199 tactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    || ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  42249029 tattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcct 42249082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 1284130 - 1284323
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  1284130 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 1284229  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||| |||||| |||| ||||||||||    
T  1284230 cacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatactattcagtacaaaaatatatta 1284323  T

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Target: chr2; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 24286111 - 24286004
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaat--atattactgagtatcaaaatatattttagatcatgtactaaaatatatta 244  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||  |||||| ||||||| ||||||||||| |||||| | ||||||||||||||    
T  24286111 caaaatatatcatattgagtacaaaaatattttattcagtacataaatatatattattgagtattaaaatatatttcagatcaagcactaaaatatatta 24286012  T
Q  245 gattgcct 252  Q
    ||||||||    
T  24286011 gattgcct 24286004  T

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Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 30344394 - 30344210
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||         || ||||     
T  30344394 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaac---------aagtaatg 30344304  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  30344303 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 30344210  T

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Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 34070031 - 34070215
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||| |||| ||||||| ||| ||| ||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  34070031 aagcatcaactgtgtatttcggtgtgttgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagt 34070130  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          |||||||||||||||||  | |||||  |  ||||||||||||||||||||| |||||||||||||| | |||||||||||    
T  34070131 aatt---------catctagtacaaaaatat-gccaattgtctaccaaaatatatcatattgagtaaaaaaatatattatttagtacataaatat 34070215  T

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Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 23068235 - 23068100
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || ||||||||| |||||||||||  | ||| |    
T  23068235 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaactttggaaacaagt 23068136  T
Q  102 aattttcatattagatctagtacaaaaatatctcaa 137  Q
    |||   | |||||||||||||||  |||||||||||    
T  23068135 aatgcacctattagatctagtacttaaatatctcaa 23068100  T

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Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 24292944 - 24292760
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || ||   ||| ||| ||||||||| ||||||||| ||||||| ||||| ||||| | ||||||||||||| || ||| |    
T  24292944 aagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaaaaggtgagaaactttgggaacaagt 24292845  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          |||||||||||||||||  ||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24292844 aattc---------atctagtacaaaaatatgccaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 24292760  T

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Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 6856845 - 6856993
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaa 137  Q
    ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |||||          || |||||| ||||||||||||    
T  6856845 tgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagtaattc---------atttagtacgaaaatatctcaa 6856935  T
Q  138 attgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
     ||||||   ||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  6856936 -ttgagtactaaaatatatcacattaagtacaaaaatatattattcagtacataaatat 6856993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 24286376 - 24286192
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || ||   ||| ||| ||||||||| ||||||||| ||||||| ||||| ||||| | ||||||| ||||| || ||| |    
T  24286376 aagcatcaactgtgaatttcggggtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaaaaggtgagaagctttgggaacaagt 24286277  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          |||||||||||||| || |||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24286276 aattc---------atctagtacaaaaacatgtcaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 24286192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 249
Target Start/End: Original strand, 34070167 - 34070290
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  34070167 aaaatatatcatattgagtaaaaaaatatat--tatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 34070264  T
Q  224 atcatgtactaaaatatattagattg 249  Q
    |||| | |||||||||||||||||||    
T  34070265 atcaagcactaaaatatattagattg 34070290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 24286240 - 24286114
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| | ||||| |||||||||||||  || ||||||||||||||||||| ||    
T  24286240 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgtcattcagtacataaatatatattattgagtatcaaaatatatttcag 24286143  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  24286142 atcaagcactaaaatatattagattgcct 24286114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 24292808 - 24292682
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| | ||||| |||||||||||||  || ||||||||||||||||||| ||    
T  24292808 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgtcattcagtacataaatatatattattgagtatcaaaatatatttcag 24292711  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  24292710 atcaagcactaaaatatattagattgcct 24292682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 34070297 - 34070423
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  34070297 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 34070394  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
     ||| | ||||||||||||||||||||||    
T  34070395 ctcaagcactaaaatatattagattgcct 34070423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 377600 - 377512
Alignment:
Q  164 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||| |||||| ||||||| ||||||||||||||| || |||||||||||||||| | ||||   ||||||||||||||||||||||    
T  377600 agtacataaatatgttattcagtacataaatatattattgtgtatcaaaatatatttcatatcaaacactaaaatatattagattgcct 377512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 6857106 - 6857201
Alignment:
Q  159 tattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||| ||||| |||||| | ||||||||||||||||||||||    
T  6857106 tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatgtatttcagatcaagcactaaaatatattagattgcct 6857201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 26903012 - 26903136
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||| ||||||||||||||| ||    
T  26903012 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgaatatcaaaatatatttcag 26903109  T
Q  224 atcatgtactaaaatatattagattgc 250  Q
    |||| | ||||||||||||||||||||    
T  26903110 atcaagcactaaaatatattagattgc 26903136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 377772 - 377588
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||  | || ||| | ||||||||||||||||| ||| ||| ||||| ||||| | ||||||||||||  |  ||| |    
T  377772 aagcatcaactgtgaatttcggtgtccgtaatgcattatgtgagctctctatttatagaaaaacttcacaactaaaaggtgagaaactttagggacaagt 377673  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          || ||||||||||||||||||| ||||||   ||| ||||| |||||||||||||||||||||||| || |||||||||||    
T  377672 aattc---------atttagtacaaaaatatctcaa-ttgagtactaaagtatattatattgagtacaaaaatatattatgcagtacataaatat 377588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 42249086 - 42249208
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||| | |||||||||||||  || ||||||||||||||||||| ||    
T  42249086 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttatttagtacataaatatatattattgagtatcaaaatatatttcag 42249183  T
Q  224 atcatgtactaaaatatattagatt 248  Q
    |||| | ||||||||||||||||||    
T  42249184 atcaagcactaaaatatattagatt 42249208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 26897484 - 26897533
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26897484 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 26897533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 26902932 - 26903008
Alignment:
Q  178 ttattcaatacataaatatat--tactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||| |||||||||||||  || ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  26902932 ttattcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcct 26903008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 26903011 - 26903060
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26903011 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 26903060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 34070296 - 34070345
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34070296 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 34070345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 42249085 - 42249134
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42249085 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 42249134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 6856976 - 6857071
Alignment:
Q  159 tattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||| |||||| |||||| ||||||| |||||||||||||  || |||| |||||||||||||| |||||| | || |||||||||||||||||||    
T  6856976 tattcagtacataaatatgttattcagtacataaatatatattattgagcatcaaaatatatttcagatcaagcacgaaaatatattagattgcct 6857071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 30641545 - 30641455
Alignment:
Q  50 ctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaatt 140  Q
    ||||||| |||||||  || | ||||||| ||||||||||||  || ||| |||||  |||||||||||||||||||||||||||||||||    
T  30641545 ctatttatagagaaaaatctcaactaatatgtgagaaacttttggaacaagtaattcacatattagatctagtacaaaaatatctcaaatt 30641455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 6857074 - 6857123
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  6857074 caaaatatatcatatttagtacaaaaatatattattcagtacataaatat 6857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 7559618 - 7559563
Alignment:
Q  197 attactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||||||||||||||  | ||||||||| ||||||||||||    
T  7559618 attactgagtatcaaaatatattttagatctagcactaaaatacattagattgcct 7559563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 13290933 - 13290872
Alignment:
Q  116 atctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatata 177  Q
    ||||| ||||||||||||||||||| |||  || ||||||||||||||||| ||||||||||    
T  13290933 atctaatacaaaaatatctcaaattaagtaacataatatatcatattgagtgcaaaaatata 13290872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 30635405 - 30635496
Alignment:
Q  2 aagcatcaactgtgaatttt-ggtgtgtggaaagcactgtgtgagctctc--tatttacagagaaagttcactactaataagtgagaaactt 90  Q
    |||||||||||||||||||| |||||||  || ||||| ||||||||||   |||||| | ||||| ||||| |||||||||||||||||||    
T  30635405 aagcatcaactgtgaattttcggtgtgtaaaatgcactttgtgagctctaaatatttataaagaaaattcacaactaataagtgagaaactt 30635496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 38426962 - 38426831
Alignment:
Q  42 tgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattg 141  Q
    |||| |||||||||| | ||||| ||||| ||||||| || | ||| |||| ||  ||||||||  ||||  |||| || || ||||||||||||||||     
T  38426962 tgagttctctatttata-agaaaattcacaactaataggtaaaaaaatttgtgattaaataattcacataccagatttaatataaaaatatctcaaattt 38426864  T
Q  142 agtctc-aaaatatatcatattgagtacaaaaa 173  Q
    ||| || ||||||||||||||||||||||||||    
T  38426863 agtatccaaaatatatcatattgagtacaaaaa 38426831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 17327708 - 17327762
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    ||||||||||||||||||| ||||||| || || |||||||||||||||| ||||    
T  17327708 tgtgtgagctctctatttatagagaaaatttacaactaataagtgagaaattttg 17327762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 17327849 - 17327890
Alignment:
Q  209 caaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  17327849 caaaatatattttagatcaagcactaaaatatattagattgc 17327890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 30640370 - 30640297
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||||||||||| |||| ||||||||||||||||||  ||| |||||| ||||  || | |||||||||||||    
T  30640370 catattagatctactacagaaatatctcaaattgagtaccaatatatataatatctagcataaaaatatattat 30640297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 19589078 - 19589006
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||| |||||||| || |||||||||| ||||| |||  |||||||||||| |||||| | |||||||||||||    
T  19589078 catactagatctaatataaaaatatcttaaattaagtgccaaaatatatcaaattgag-ataaaaatatattat 19589006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 30635527 - 30635607
Alignment:
Q  98 aaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||||  |||||||||| |||||  |||| ||| ||||||    
T  30635527 aaataattcacatattagctctagtaaaaaaatatctc-aattgagtaccaaaatatattatattatgtaccaaattatatt 30635607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 30658978 - 30659007
Alignment:
Q  224 atcatgtactaaaatatattagattgcctt 253  Q
    ||||||||||||||||||||||||||||||    
T  30658978 atcatgtactaaaatatattagattgcctt 30659007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 35186 - 34938
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| || ||||| |||||| |    
T  35186 aagcatcaactgtgaatttcggtgtatcgaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgacaagctttgggagcaagt 35087  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||     
T  35086 aattctcatattagatatagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattatttagtacaaaaatatattat 34987  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  34986 tgagtatcaaaatatatttcagatcatgtactaaaatattttagattgc 34938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 722 - 475
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||||||| |  ||||||||||||  ||||||||||||||||||||| |||||| |    
T  722 aagcatcaactgtgaatttcggtgtattgaaagcactgtgtgagctctctatatgtagagaaagttcataactaataagtgagaaactttgggagcaagt 623  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||     
T  622 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaatatattattcagtacaaaaatatattat 524  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  523 tgagtatcaaaatatatttcagatcatgtactaaaatattttagattgc 475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 169; Significance: 1e-90; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 59038 - 59285
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||| | ||||||| ||||| ||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || ||| |    
T  59038 aagcatcaattatgaatttcggtgtatggaaagcattatgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggatcaagt 59137  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||     
T  59138 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaatatattattcagtacaaaaatatattat 59236  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  59237 tgagtatcaaaatatatttcagatcatgtactaaaataatttagattgc 59285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 46 - 250
Target Start/End: Original strand, 63284 - 63487
Alignment:
Q  46 ctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtc 145  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  63284 ctctctatttatagagaaagttcacaactaataagtgagaaactttgggatcaagtaattctcatattagatctagtacaaaaatatctcaaattgagtc 63383  T
Q  146 tcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattag 245  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||  ||||    
T  63384 tcaaaatatatcatattgagtac-aaaatatattattcagtacaaaaatatattattgagtatcaaaatatatttcagatcatgtactaaaataatttag 63482  T
Q  246 attgc 250  Q
    |||||    
T  63483 attgc 63487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 9e-85; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 2 - 249
Target Start/End: Complemental strand, 6112241 - 6111998
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| | ||||||||| | ||||||||||||||||||||| |||||| |    
T  6112241 aagcatcaactgtgaatttcggtgtgttgaatgcactgtgtgagctctctatttatatagaaagttcccaactaataagtgagaaactttgggagcaagt 6112142  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||  ||    ||||||||     
T  6112141 aattatcatattagatctagtacaaaaatatctcaaattgattctcaaaatagatcatattgagtacaaaaatatattattcagaac----atatattat 6112046  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattg 249  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||    
T  6112045 tgagtatcaaaatatatttcggatcatgcactaaaatatattagattg 6111998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 15704393 - 15704144
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||| | ||||||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  15704393 aagcatcaactgtgaatctcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 15704294  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||  |||||||||| ||||| | ||||||||||||||||||| |||| ||||||||||     
T  15704293 aatgcacctattagatctagtacttaaatatctcaa-ttgagtaccaaaatatattatattaaatacaaaaatatattattcagtacagaaatatattat 15704195  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| | | |||  || |||||||||||||||||||    
T  15704194 tgagtatcaaaatatatttcaaagcatccaccaaaatatattagattgcct 15704144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 2077424 - 2077673
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||| |||||||||| || || |||| || ||||| |||||||||||||||  | ||| |    
T  2077424 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgagagttctctatttatagggatagtttacaactaaaaagtgagaaactttggaaacaagt 2077523  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||| ||||||  ||||||||||| ||||||   ||||||||| ||||| |||||||||||| |||||||| |||||||||||||||     
T  2077524 aatgcacctattagatttagtacttaaatatctcaa-ttgagtactaaaatatattatattaagtacaaaaatacattattcagtacataaatatattat 2077622  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    | ||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  2077623 taagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcct 2077673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 16625028 - 16625212
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || ||||||||||||||||||||| || ||| |    
T  16625028 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttgggaacaagt 16625127  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          || ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16625128 aattc---------atttagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 16625212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 22806967 - 22807160
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| || ||||||| ||||| |||| || |||||||| ||||||||||||  | ||| ||||     
T  22806967 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttccctatttatagagatagtttacaactaataaatgagaaactttggaaacaagtaatg 22807066  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | |||||||||||||||  |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  22807067 cacctattagatctagtacttaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 22807160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 16760998 - 16761192
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacag-agaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| || ||| | || || |||||||||||||||||||||  | ||| ||||    
T  16760998 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttataggagataatttacaactaataagtgagaaactttggaaacaagtaat 16761097  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
       | ||||||||||||||   |||||| |||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  16761098 gcacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 16761192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 27324541 - 27324346
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||  ||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  27324541 aagcatcaactgtgaatttcggtgtgtagaatgca--gtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 27324444  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| |||| ||||||  |||||||||| ||||| |||| |||||||||||||||| |||| ||||||||||    
T  27324443 aatgcacctattagatctagtaattaaatatgtcaa-ttgagtaccaaaatatattatattaagtaaaaaaatatattattcagtacagaaatatatta 27324346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 26981207 - 26981451
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||| |||| || ||   ||| |||  |||||||||||||||||| | ||||| ||||| ||||||| ||||||||||||| || ||| |    
T  26981207 aagcatcaactgtgtatttcggggtccagaatgcatcgtgtgagctctctatttataaagaaatttcacaactaataggtgagaaactttgggaacaagt 26981306  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaata--tatt 199  Q
     |||          || ||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||  |||||||||  ||||    
T  26981307 tattc---------atttagtacaaaaatatctcaa-ttgagtactaaaatatatcatattgagtacaaaaatatattattcaggacataaatatgtatt 26981396  T
Q  200 actgagtatcaaa--atatattttagatcatgtactaaaatatattagattgcct 252  Q
    | |||||||||||  |||||||| |||||| | ||||||||||| |||| |||||    
T  26981397 attgagtatcaaaatatatatttcagatcaagcactaaaatatactagaatgcct 26981451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31477187 - 31477011
Alignment:
Q  1 aaagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaa 100  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | |||     
T  31477187 aaagcatcaactgtgaattttggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaag 31477088  T
Q  101 taattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 180  Q
    ||||   | ||||||||||||||   |||||| || ||||||||  ||||||||||  |||| |||||||||||||||||    
T  31477087 taatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatat--tattcagtacaaaaatatatta 31477011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 28964233 - 28964135
Alignment:
Q  74 taataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaa 172  Q
    ||||| ||||||||||||| || |||||||||   ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  28964233 taatatgtgagaaactttgggaacaaataattcaaatattagatctagtacaaaaatatctcaaattgagtaccaaaatatatcatattgagtacaaaa 28964135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 27073836 - 27073943
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataa--atatattactgagtatcaaaatatattttagatcatgtactaaaatatatta 244  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||  |||||||| ||||||||||||||||||||| ||||   | ||||||||||||    
T  27073836 caaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatattttaaatcaaccattaaaatatatta 27073935  T
Q  245 gattgcct 252  Q
    ||||||||    
T  27073936 gattgcct 27073943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 24588660 - 24588570
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||  ||||||||||||||| |||||    
T  24588660 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaaattcaaaactaataagtgagaacctttg 24588570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 16625295 - 16625400
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattaga 246  Q
    |||||||||||||||| |||| |||||||||||||| | ||||||||||||||| |||||||||||||||| || | | |||| |||||||||||||| |    
T  16625295 caaaatatatcatatttagtataaaaatatattatttagtacataaatatattattgagtatcaaaatatagttcaaagcatgcactaaaatatattata 16625394  T
Q  247 ttgcct 252  Q
    ||||||    
T  16625395 ttgcct 16625400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 26981454 - 26981561
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataa--atatattactgagtatcaaaatatattttagatcatgtactaaaatatatta 244  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||  |||||||| ||||||||||||||||||||| ||||   | ||||||||||||    
T  26981454 caaaatatattaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatattttaaatcaaccattaaaatatatta 26981553  T
Q  245 gattgcct 252  Q
    ||||||||    
T  26981554 gattgcct 26981561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 19772494 - 19772404
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||    
T  19772494 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttg 19772404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 22949848 - 22950032
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || |  |||||||||||||||||         || ||||     
T  22949848 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac---------aagtaatg 22949938  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  22949939 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 22950032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 22953804 - 22953988
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || |  |||||||||||||||||         || ||||     
T  22953804 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac---------aagtaatg 22953894  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  22953895 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 22953988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 23872292 - 23872476
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || |  |||||||||||||||||         || ||||     
T  23872292 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac---------aagtaatg 23872382  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  23872383 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 23872476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 23876248 - 23876432
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || |  |||||||||||||||||         || ||||     
T  23876248 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttataactaataagtgagaaac---------aagtaatg 23876338  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| |||| ||||||  |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  23876339 cacctattagatctagtaattaaatatatcaa-ttgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 23876432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 14073754 - 14073931
Alignment:
Q  9 aactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttc 108  Q
    |||||||||||| || ||  |||| ||| ||| ||||||||||||||| ||||||| ||||| |||||||  |||||||||||| |  |||||||||       
T  14073754 aactgtgaatttcggggtccggaatgcattgtatgagctctctatttatagagaaatttcacaactaatagatgagaaactttggggacaaataattc-- 14073851  T
Q  109 atattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
           || || |||||||||||| ||| ||| ||  ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  14073852 -------atttaatacaaaaatatcacaa-ttgtgtaccaaaatataccatattgagtacaaaaatatattatgcaatacataaatat 14073931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 2862934 - 2862779
Alignment:
Q  22 ggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctag 121  Q
    ||||| ||||| | ||| ||||||||||||||||| ||||||| ||||| | || || ||| | ||||||| || ||| |||||  ||||||||||||||    
T  2862934 ggtgtatggaatgaactatgtgagctctctatttatagagaaaattcacaaatagtatgtgtgcaactttgggaacaagtaattcacatattagatctag 2862835  T
Q  122 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    || ||||||||  ||||||||||   ||||||||   |||||||||||||||||||||    
T  2862834 tataaaaatattgcaaattgagtacaaaaatata--ctattgagtacaaaaatatatt 2862779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 19772369 - 19772288
Alignment:
Q  171 aaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||   | |||| ||||||||||||||||||||||    
T  19772369 aaatatattattcagcacataaatatattattgagtatcaaaatatatttctaagcatgcactaaaatatattagattgcct 19772288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 14073921 - 14074008
Alignment:
Q  166 tacaaaaatatattattcaatacataaatatattactgagtatcaaaatatatttt-agatcatgtactaaaatatattagattgcct 252  Q
    |||| |||||| ||||||| | ||||||||||||| || ||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  14073921 tacataaatatgttattcagtgcataaatatattattgtgtatcaaaatatattttcagatcaagcactaaaatatattagattgcct 14074008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 27073742 - 27073833
Alignment:
Q  165 gtacaaaaatatattattcaatacataaata--tattactgagtatcaaa--atatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||||||||||||||| ||||||||||  ||||| |||||||||||  |||||||| |||||| | ||||||||||| ||||||||||    
T  27073742 gtacaaaaatatattattcagtacataaatatgtattattgagtatcaaaatatatatttcagatcaagcactaaaatatactagattgcct 27073833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 18387547 - 18387782
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||| |||||| ||    || ||| ||||||||||||||||||| | ||||| ||||| | ||||| ||||||||||||| |  ||| ||||    
T  18387547 catcaactgtgatttttggggtccaaaatgcattgtgtgagctctctatttatacagaaacttcacaattaataggtgagaaactttggggacaagtaat 18387646  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactga 204  Q
    ||         || ||||||||||||||| ||| ||||||   |||||||||  |||  |||  | |||||| ||||||| ||||||||||||||| ||     
T  18387647 tt---------atgtagtacaaaaatatcccaa-ttgagtactaaaatatat--tatgcagtcaataaatatgttattcagtacataaatatattattgt 18387734  T
Q  205 gtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
     ||||||||||| ||| ||||||   ||||||||||||||||||||||    
T  18387735 ctatcaaaatatgtttcagatcaaacactaaaatatattagattgcct 18387782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 14322845 - 14322695
Alignment:
Q  49 tctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctca 148  Q
    |||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||   | ||||||||||||||   |||||| |||| ||||||  ||    
T  14322845 tctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatgcacctattagatctagtaattaaatatatcaa-ttgagtacca 14322747  T
Q  149 aaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||||||| ||||| ||||||||||||||||||  | |||| ||||||||||    
T  14322746 aaatatattatattaagtacaaaaatatattatctagtacaaaaatatatta 14322695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 2759542 - 2759470
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||||||||||| || ||||||||||||| ||||||  |||||||||| |||||||||| |||||||||||||    
T  2759542 catattagatctaataaaaaaatatctcaa-ttgagtaccaaaatatattatattgagtaaaaaaatatattat 2759470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 2882237 - 2882082
Alignment:
Q  22 ggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctag 121  Q
    ||||| ||||| | ||| ||||||||||  ||||| ||||||| ||||| | || || ||| | || |||| || ||| |||||  ||||||||||||||    
T  2882237 ggtgtatggaatgaactatgtgagctctgaatttatagagaaaattcacaaatagtatgtgtgcaaatttgggaacaagtaattcacatattagatctag 2882138  T
Q  122 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    || ||||||||| ||||||||||   ||| ||||   |||||||||||||||||||||    
T  2882137 tataaaaatatcgcaaattgagtacaaaagtata--ctattgagtacaaaaatatatt 2882082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 15645417 - 15645479
Alignment:
Q  116 atctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatat 178  Q
    ||||||||||||||||||| | |||||||  |||||||||||||||||  |||||||||||||    
T  15645417 atctagtacaaaaatatcttacattgagtaccaaaatatatcatattgtttacaaaaatatat 15645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 2759820 - 2759769
Alignment:
Q  40 tgtgagctctctatttacagagaaagttcactactaataagtgagaaacttt 91  Q
    |||||||||||| |||||||||||| ||||| |||||||||| |||||||||    
T  2759820 tgtgagctctctgtttacagagaaaattcacaactaataagtaagaaacttt 2759769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 27073634 - 27073700
Alignment:
Q  39 gtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    |||||||||||||||||| | ||||| ||||| ||||||| ||||||||||||| || ||| |||||    
T  27073634 gtgtgagctctctatttataaagaaatttcacaactaataggtgagaaactttgggaacaagtaatt 27073700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 15991160 - 15991087
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    |||||||||||||| ||||| |  | | |||||||||  ||||||| ||||| |||||||||||||||||||||    
T  15991160 tttggtgtgtggaatgcactatacgtgttctctatttgtagagaaaattcacaactaataagtgagaaactttg 15991087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 31477061 - 31477011
Alignment:
Q  149 aaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||||||||| ||||||||| ||||||||||||||| |||| ||||||||||    
T  31477061 aaatatatca-attgagtaccaaaatatattattcagtacaaaaatatatta 31477011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 15991045 - 15990977
Alignment:
Q  111 attagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    |||||| |||||| ||||||||||| ||||||||   ||||||||| |||||||||| |||||||||||||    
T  15991045 attagacctagtataaaaatatctc-aattgagtaataaaatatattatattgagta-aaaaatatattat 15990977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 16625231 - 16625292
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||| ||||    
T  16625231 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagatagcct 16625292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 2759729 - 2759657
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||||||||||| || ||||||||||| |||||| |  ||||||||||  ||||||||| ||| |||||||||    
T  2759729 catattagatctaataaaaaaatatctc-aattgaataccaaaatatattttattgagtaaaaatatatattat 2759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 15641033 - 15641090
Alignment:
Q  122 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    ||||||||||| ||| |||||||   ||||||||| |||||| |||||||||||||||    
T  15641033 tacaaaaatatttcacattgagtacaaaaatatattatattgtgtacaaaaatatatt 15641090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 28964139 - 28964098
Alignment:
Q  209 caaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    |||||||||||| ||||||||||| |||||||| ||||||||    
T  28964139 caaaatatatttcagatcatgtaccaaaatataatagattgc 28964098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 158; Significance: 4e-84; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 47455 - 47209
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  47455 aagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 47356  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | |||| ||||||||||     
T  47355 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaatatattat 47258  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||| ||||||||||||||| |||||||| ||||||||||||||||||||    
T  47257 tgactatcaaaatatatttcagatcatgcactaaaatatattagattgc 47209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 52399 - 52153
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  52399 aagcatcaactgtgaatttcggtgtatgtaaagcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 52300  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | |||| ||||||||||     
T  52299 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaatatattat 52202  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||| ||||||||||||||| |||||||| ||||||||||||||||||||    
T  52201 tgactatcaaaatatatttcagatcatgcactaaaatatattagattgc 52153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 9362 - 9116
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||| |    
T  9362 aagcatcaactgtgaatttcggtgtgtggaatgcactgtgtgagctctctatttatagagaaagttcacaactaataagtgagaaactttaggagcaagt 9263  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||  |||| | ||||  ||||||||||| | |||| ||||||||||     
T  9262 aattctcatattagatctagtacaaaaatatctcaaattgagtctcaaattatat--tattcaatacatgaatatattattgactacagaaatatattat 9165  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||| ||||||||||||||| |||| ||| ||||||||||||||||||||    
T  9164 tgactatcaaaatatatttcagattatgcactaaaatatattagattgc 9116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 49466 - 49269
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||| |||||||||||||| ||||| | |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  49466 aagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 49367  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||    
T  49366 aattctcatattaaatctagtacaaaaatatctcaaattgagtctcaaaatatattctattgagtac-aaaatatattattcactacataaatatatta 49269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 49263 - 49197
Alignment:
Q  186 tacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||| |||||||||| ||| ||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  49263 tacagaaatatattattgactatcaaaatatgtttcagatcatgcactaaaatatattagattgcct 49197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 149168 - 149365
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||| |||||||||||||| ||||| | |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |    
T  149168 aagcgtcaactgtgaatttcggtgtattgaaagcactgtgtgagttctctatttatagagaaagttcacaactaataagtgagaaactttgggagcaagt 149267  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||    
T  149268 aattctcatattaaatctagtacaaaaatatctcaaattgagtctcaaaatatattctattgagtac-aaaatatattattcactacataaatatatta 149365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 149387 - 149437
Alignment:
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||| ||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  149387 tgactatcaaaatatgtttcagatcatgcactaaaatatattagattgcct 149437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 127015 - 127264
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  |  || |    
T  127015 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaaaaagt 127114  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  127115 aatgcacctattagatctagtacttaaatatctcaa-ttgagtgccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattat 127213  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  127214 tgagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcct 127264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 21919 - 22168
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||||||||||||||||  |||||| ||| |||||||||||| |||||||||| ||||| |||| || ||| |||||||||||||||||  | ||| |    
T  21919 aagcatcaactgtgaatttcagtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaacttataagtgagaaactttggaaacaagt 22018  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  22019 aatgcacctattagatctagtacttaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattat 22117  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  22118 tgagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcct 22168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 7000 - 7249
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||| ||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||| ||||||||||  | ||| |    
T  7000 aagcatcaactatgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagttagaaactttggaaacaagt 7099  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||||||||||  ||||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||| ||||||     
T  7100 aatgcacctattagatctagtacttaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaagatattat 7198  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  7199 tgagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcct 7249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 5363 - 5114
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| | | |||||||||||| |||||||||| || || |||| || |||||||||||||||||||||| | ||| |    
T  5363 aagcatcaactgtgaatttcggtgtgtaggatgcactgtgtgagttctctatttatagggatagtttacaactaataagtgagaaactttgaaaacaagt 5264  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   |||||||||||||||||  ||||||||| ||||||||   ||| ||||| ||||| ||||||||||||||||||||| |||| ||||||||||     
T  5263 aatgcacatattagatctagtacttaaatatctc-aattgagtactaaattatattatattaagtacaaaaatatattattcagtacaaaaatatattat 5165  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| | | |||| | ||||||||||||||||||||    
T  5164 tgagtatcaaaatatatttcaaagcatgcaataaaatatattagattgcct 5114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 252
Target Start/End: Complemental strand, 2185 - 2006
Alignment:
Q  72 actaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaa 171  Q
    |||||||||||||||||||||  | ||| ||||   |||||||||||||||||  ||||||||||| ||||||   ||||||||| ||||| ||||||||    
T  2185 actaataagtgagaaactttggaaacaagtaatgcacatattagatctagtacttaaatatctcaa-ttgagtactaaaatatattatattaagtacaaa 2087  T
Q  172 aatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||| |    ||| ||||||||||||||||||||||    
T  2086 aatatattattcagtacaaaaatatattattgagtatcaaaatatatttcaatggatgcactaaaatatattagattgcct 2006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 7779 - 8028
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    |||||| || |||||||||  |||||| ||| |||||||||||| |||||||||| ||||| |||| || ||||||||| |||||||||||  | |||||    
T  7779 aagcataaattgtgaatttctgtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagcgagaaactttggaaacaaat 7878  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    |||   | |||||||| ||||||  ||||||||||| ||||||  |||||||||| ||||| |||||||||||||||| |||| |||| ||||||||||     
T  7879 aatgcacctattagatttagtacttaaatatctcaa-ttgagtaccaaaatatattatattaagtacaaaaatatattcttcagtacaaaaatatattat 7977  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||||||||||||||||||| | | |||| ||||||||||||||||||||||    
T  7978 tgagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcct 8028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 83670 - 83784
Alignment:
Q  138 attgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaa 237  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  83670 attgagtatcaaaatatattatattgagtacaaaaatatattattcagtacataaatatattattgagtatcaaaatatatttcagatcatgtactaaaa 83769  T
Q  238 tatattagattgcct 252  Q
    |||||||||||||||    
T  83770 tatattagattgcct 83784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 14959 - 14762
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||  | ||| |    
T  14959 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttggaaacaagt 14860  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  14859 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatatta 14762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 87; Significance: 8e-42; HSPs: 8)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 81173 - 81412
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || |||| ||| ||| ||||||||| ||||||||| ||||||| ||| | ||||||| ||||||||||||| || ||| ||||    
T  81173 catcaactgtgaatttcggggtgttgaatgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagtaat 81272  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataa--atatattact 202  Q
             | |||||||||||||||||  ||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||  |||||||  |    
T  81273 ---------acatctagtacaaaaatatgccaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattgtt 81362  T
Q  203 gagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    ||| |||||||||||||| |||||| | ||||||||||||||||||||||    
T  81363 gagcatcaaaatatatttcagatcaagcactaaaatatattagattgcct 81412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 64775 - 64956
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || |||| | | ||| ||||||||| ||||||||| ||||||| ||| | ||||||| ||||||||||||| || ||| ||||    
T  64775 catcaactgtgaatttcggggtgttgtacgcattgtgtgagccctctatttatagagaaacttcccaactaataggtgagaaactttgggaacaagtaat 64874  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
             | |||||||||||||||||  ||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  64875 ---------acatctagtacaaaaatatgccaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 64956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 81416 - 81542
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  81416 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 81513  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  81514 atcaagcactaaaatatattagattgcct 81542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 64908 - 65034
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  |  ||||||||||||||||||| ||    
T  64908 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattgttgagtatcaaaatatatttcag 65005  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  65006 atcaagcactaaaatatattagattgcct 65034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 65038 - 65164
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  |  ||||||||||||||||||| ||    
T  65038 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattgttgagtatcaaaatatatttcag 65135  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  65136 atcaagcactaaaatatattagattgcct 65164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 65168 - 65294
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  65168 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 65265  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||| ||| ||||||||||||||    
T  65266 atcaagcacttaaaaatattagattgcct 65294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 65037 - 65086
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  65037 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 65086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 65167 - 65216
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  65167 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 65216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 478 - 714
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||| |   ||| ||| ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| |  ||| |    
T  478 aagcatcaactgtgaatttcggtatccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaactttggggacaagt 577  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatattac 201  Q
    ||||          || ||||||||||||||| ||| ||||||   ||||||||| |||||||||||||||||||||||| || |||||||||||||||     
T  578 aattc---------atgtagtacaaaaatatcccaa-ttgagtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatatattat 667  T
Q  202 tgagtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    || |||||||||||||||| || |||   ||||||||||||||||||    
T  668 tgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatt 714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 7489 - 7686
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |    
T  7489 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 7588  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  7589 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 7686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 30296 - 30480
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || |||| ||| ||| ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  30296 aagcatcaactgtgaatttcggggtgtcgaatgcagtgtgtgagctctctatttatagagaaatttcacaactaataggtgagaaactttgggaacaagt 30395  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          || || |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30396 aatt---------catttaatacaaaaatatctc-aattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 30480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 24247 - 24349
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattaga 246  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||||||||| |||||||||||||||| || | |  ||| ||||||||||||||||    
T  24247 caaaatatatcatattgagtacaaaaataaattattcagtacagaaatatattattgagtatcaaaatatagttcaaagtatgcactaaaatatattaga 24346  T
Q  247 ttg 249  Q
    |||    
T  24347 ttg 24349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 30499 - 30560
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  30499 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 30560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 196
Target Start/End: Complemental strand, 24775 - 24594
Alignment:
Q  5 catcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataat 104  Q
    |||||||||||||||| || ||   ||| ||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| ||||    
T  24775 catcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaactttgggaacaagtaat 24676  T
Q  105 tttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |          || ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24675 tc---------atttagtacaaaaatatctcaa-ttgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 24594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 24575 - 24514
Alignment:
Q  193 atatattactgagtatcaaaatata--ttttagatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||  ||| |||||| | ||||||||||||||||||||||    
T  24575 atatattattgagtatcaaaatatacatttcagatcaagcactaaaatatattagattgcct 24514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 10904 - 10711
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  10904 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 10805  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||  || ||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  10804 cacctattagatctagtaattaaatatatc-aattgagtaccataatatatcatattaagtacaaaaatatattattcagtacaaaaatatatta 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 6954 - 6752
Alignment:
Q  47 tctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtct 146  Q
    |||||||||| || || |||| || |||||||||||||||||||||  |  || ||||   | |||||||||||||||  ||||||||||| ||||||      
T  6954 tctctatttatagggatagtttacaactaataagtgagaaactttggaaataagtaatgcacctattagatctagtacttaaatatctcaa-ttgagtac 6856  T
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattaga 246  Q
     ||||||||| ||||| |||||||||||| |||||||| |||| |||||||||| | ||||||||||||||||| | | |||| ||||||||||||||||    
T  6855 taaaatatattatattaagtacaaaaatacattattcagtacagaaatatattattaagtatcaaaatatatttcaaagcatgcactaaaatatattaga 6756  T
Q  247 ttgc 250  Q
    ||||    
T  6755 ttgc 6752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 75; Significance: 1e-34; HSPs: 6)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 19704 - 19520
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || ||   ||| ||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||  || ||| |    
T  19704 aagcatcaactgtgaatttcggggtccagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataagtgagaaactttaggaacaagt 19605  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          || ||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19604 aattc---------atttagtacaaaaatatctcaa-ttgagtactaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 19520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 8945 - 8819
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  8945 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 8848  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  8847 atcaagcactaaaatatattagattgcct 8819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 8946 - 8897
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8946 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 9027 - 8949
Alignment:
Q  178 ttattcaatacataaatatat--tactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    ||||||| |||||||||||||  || ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  9027 ttattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 8949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 19437 - 19401
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattc 183  Q
    |||||||||||||||||||||||||||||||||||||    
T  19437 caaaatatatcatattgagtacaaaaatatattattc 19401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 19501 - 19440
Alignment:
Q  193 atatattactgagtatcaaaatatatttt--agatcatgtactaaaatatattagattgcct 252  Q
    |||||||| ||||||||||||||||| ||  |||||| | ||||||||||||||||||||||    
T  19501 atatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcct 19440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 32063 - 31870
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  32063 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 31964  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||   ||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  31963 cacctattagatctagtaattaaatatatc-aattgagtacaaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 31870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 13490 - 13297
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  13490 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 13391  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||   ||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||    
T  13390 cacctattagatctagtaattaaatatatc-aattgagtactaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatatta 13297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 26819 - 26924
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattaga 246  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| || | | |||| ||||||||||||||||    
T  26819 caaaatatatcatattgagtacaaaaatatattattcagtacaaaaatatattattgagtatcaaaatatagttcaaagcatgcactaaaatatattaga 26918  T
Q  247 ttgcct 252  Q
    ||||||    
T  26919 ttgcct 26924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 30879 - 30969
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    ||||||||||||||||||| ||||| | ||| ||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  30879 aagcatcaactgtgaatttcggtgtcttgaatgcattgtgtgagctctctatttatagagaaatttcacaactaataagtgagaaactttg 30969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 73; Significance: 2e-33; HSPs: 14)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 187929 - 187822
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttagatcatgtactaaaatatatta 244  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||  || ||||||||||||||||||| |||||| | ||||||||||||||    
T  187929 caaaatatatcatattgagtacaaaactatattattcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatatta 187830  T
Q  245 gattgcct 252  Q
    ||||||||    
T  187829 gattgcct 187822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 193749 - 193487
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| |||||   ||| ||| ||||||||| ||||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |    
T  193749 aagcatcaactgtgaatttcggtgtcctgaatgcattgtgtgagccctctatttatagagaaacttcacaactaataggtgagaaactttgggaacaagt 193650  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat----- 196  Q
    ||||          ||||||||||||||||| |||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||         
T  193649 aattc---------atctagtacaaaaatatgtcaa-ttgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttat 193560  T
Q  197 -----------------attactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
                     |||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  193559 tcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcct 193487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 192963 - 192837
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  192963 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 192866  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  192865 atcaagcactaaaatatattagattgcct 192837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 193093 - 192967
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  193093 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 192996  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  192995 atcaagcactaaaatatattagattgcct 192967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 193223 - 193097
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  193223 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 193126  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  193125 atcaagcactaaaatatattagattgcct 193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 193483 - 193357
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  193483 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 193386  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  193385 atcaagcactaaaatatattagattgcct 193357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 193353 - 193230
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || |||||||||| |||||||| ||    
T  193353 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaatatatatttcag 193256  T
Q  224 atcatgtactaaaatatattagattg 249  Q
    |||| | |||||||||||||||||||    
T  193255 atcaagcactaaaatatattagattg 193230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 192964 - 192915
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  192964 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 192915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 193094 - 193045
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  193094 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 193045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 193224 - 193175
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  193224 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 193175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 193354 - 193305
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  193354 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 193305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 193484 - 193435
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  193484 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 193435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 187819 - 187770
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  187819 caaaatatatcatattgagtacaaaaatatattatttagtacataaatat 187770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 227
Target Start/End: Complemental strand, 187818 - 187717
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  187818 aaaatatatcatattgagtacaaaaatatat--tatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 187721  T
Q  224 atca 227  Q
    ||||    
T  187720 atca 187717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 10458 - 10281
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |    
T  10458 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 10359  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatta 180  Q
    |||   | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| |||||||||||||||||    
T  10358 aatgcacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtacaaaaatatatta 10281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 21464 - 21272
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| ||||     
T  21464 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagtaatg 21365  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||  |||||||||| ||||| ||||| ||||||||||||||| |||| ||||||||||    
T  21364 cacctattagatctagtaattaaatatatc-aattgagtaccaaaatatattatattaagtac-aaaatatattattcagtacaaaaatatatta 21272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 35489 - 35297
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| |||||  ||| || |||||||||||||||||||||  | ||| ||||     
T  35489 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagattgtttacaactaataagtgagaaactttggaaacaagtaatg 35390  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || |||| |||  |||||||||| ||||| ||||| ||||||||||||||| |||| ||||||||||    
T  35389 cacctattagatctagtaattaaatatatc-aattaagtaccaaaatatattatattaagtac-aaaatatattattcagtacagaaatatatta 35297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 71743 - 71834
Alignment:
Q  2 aagcatcaactgtgaa-ttttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  71743 aagcatcaactgtgaaattttggtgtgtagaatgcactgtgtgagctctctatttatagagaaaattcacaactaataagtgagaaactttg 71834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 71866 - 71943
Alignment:
Q  101 taattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatatt 179  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||  |||||||||| || ||  |||| ||||||||||    
T  71866 taatttacatattagctctagtacaaaaatatctc-aattgagtaccaaaatatattattttatgtaccaaaatatatt 71943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 71933 - 71974
Alignment:
Q  209 caaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    |||||||||||| |||||| | ||||||||||||||||||||    
T  71933 caaaatatatttcagatcaagcactaaaatatattagattgc 71974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 22649 - 22753
Alignment:
Q  148 aaaatatatcatattgagtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagat 247  Q
    ||||||||| ||||| |||||||||||| |||||||| |||| |||||||||| | ||||||||||||||||| | | |||| |||||||||||||||||    
T  22649 aaaatatattatattaagtacaaaaataaattattcagtacaaaaatatattattaagtatcaaaatatatttcaaagcatgcactaaaatatattagat 22748  T
Q  248 tgcct 252  Q
    |||||    
T  22749 tgcct 22753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12451 - 12360
Alignment:
Q  1 aaagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| |||| || |||||||||||||||||||||    
T  12451 aaagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagatagtttacaactaataagtgagaaactttg 12360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 121178 - 121313
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || |||||||||||||||||||||  | ||| |    
T  121178 aagcatcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaactttggaaacaagt 121277  T
Q  102 aattttcatattagatctagtacaaaaatatctcaa 137  Q
    |||   | |||||||||||||||  |||||||||||    
T  121278 aatgcacctattagatctagtacttaaatatctcaa 121313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 250
Target Start/End: Original strand, 8219 - 8444
Alignment:
Q  22 ggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctag 121  Q
    ||||||||||| | |||  |||| ||  ||||||| |||||||  |||  ||||||| ||||||||||||| || ||| |||||  ||||||||||||||    
T  8219 ggtgtgtggaatgaactaggtgatctacctatttatagagaaaaatcataactaatatgtgagaaactttgggaacaagtaattcacatattagatctag 8318  T
Q  122 tacaaaaatatctcaaattgagtctcaaaatatatcatattgagtac-aaaaatatattattcaatacataaatatattactgagtatcaaaatatattt 220  Q
    ||||||||||||||||||| |||  | ||||| |||||||||||||| ||||| ||||| || | |||  |||||||||| |||||  |||||||||| |    
T  8319 tacaaaaatatctcaaattcagt-accaaataaatcatattgagtacaaaaaaaatatt-ttgagtac--aaatatattattgagtgccaaaatatatgt 8414  T
Q  221 tagatcatgtactaaaatatattagattgc 250  Q
       |||| |||| |||||||||||||||||    
T  8415 ctaatcaagtacgaaaatatattagattgc 8444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 2891 - 3066
Alignment:
Q  72 actaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaa- 170  Q
    ||||||| ||||||||||||| || ||| |||||  ||||||||||||||||||||||||| ||||||| | |  | ||||| ||||||||||||||||     
T  2891 actaatatgtgagaaactttgggaacaagtaattcacatattagatctagtacaaaaatatgtcaaattcaat-accaaatagatcatattgagtacaag 2989  T
Q  171 aaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    ||||||||| || | |||  |||||||||| |||||  |||||||||| |   |||| |||| |||||||||||||||||    
T  2990 aaatatatt-ttgagtac--aaatatattattgagtgccaaaatatatgtctaatcacgtacgaaaatatattagattgc 3066  T

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Target: scaffold0415 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 200
Target Start/End: Original strand, 1104 - 1289
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataatt 105  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| ||||| | || || ||||||||||||||||         ||| ||||     
T  1104 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctatttatagagataatttacaactaataagtgagaaa---------caagtaatg 1194  T
Q  106 ttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaa-atatattattcaatacataaatatatta 200  Q
      | ||||||||||||||   |||||| || ||||||||  |||||||||||||||| ||||||||| |||||||||||| |||| ||||||||||    
T  1195 cacctattagatctagtaattaaatatatc-aattgagtaccaaaatatatcatattaagtacaaaatatatattattcagtacaaaaatatatta 1289  T

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Target: scaffold0863 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 252
Target Start/End: Original strand, 2 - 128
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  2 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 99  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    |||| | ||||||||||||||||||||||    
T  100 atcaagcactaaaatatattagattgcct 128  T

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Target: scaffold0863; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 1 - 50
Alignment:
Q  147 caaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1 caaaatatatcatattgagtacaaaaatatattattcagtacataaatat 50  T

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Target: scaffold0357 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 3829 - 3645
Alignment:
Q  2 aagcatcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaat 101  Q
    ||||||||||||||||||| || ||   ||| ||| ||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||  || ||| |    
T  3829 aagcatcaactgtgaatttcggggttcagaatgcattgtgtgagctctctatttatagagaaacttcacaactaataggtgagaaactttaggaacaagt 3730  T
Q  102 aattttcatattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    ||||          || || |||||||||||  ||| |||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3729 aattc---------atttaatacaaaaatatgccaa-ttgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatat 3645  T

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Target: scaffold0357; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 3693 - 3567
Alignment:
Q  126 aaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatatat--tactgagtatcaaaatatattttag 223  Q
    ||||||| ||| |||||||   |||||||||  |||| |||||| |||||| ||||||| |||||||||||||  || ||||||||||||||||||| ||    
T  3693 aaaatatatcatattgagtacaaaaatatat--tattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcag 3596  T
Q  224 atcatgtactaaaatatattagattgcct 252  Q
    ||||   ||||||||||||||||||||||    
T  3595 atcaaacactaaaatatattagattgcct 3567  T

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Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 199974 - 200062
Alignment:
Q  164 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgcct 252  Q
    |||||| |||||| ||||||| ||||||||||||||| || |||||||||||||||| || |||  |||||||||||||||||||||||    
T  199974 agtacataaatatgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaatactaaaatatattagattgcct 200062  T

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Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 196
Target Start/End: Original strand, 199838 - 199986
Alignment:
Q  38 tgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaa 137  Q
    ||||||||||||||||||| ||||||| ||| | ||||||| ||||||||| ||| |  ||| |||||          || ||||||||||||||| | |    
T  199838 tgtgtgagctctctatttatagagaaacttcgcaactaataggtgagaaacattggggacaagtaattc---------atgtagtacaaaaatatc-cta 199927  T
Q  138 attgagtctcaaaatatatcatattgagtacaaaaatatattattcaatacataaatat 196  Q
    |||||||   ||||||||| |||||||||||||||||||||||| || |||||||||||    
T  199928 attgagtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatat 199986  T

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Target: scaffold0720 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 5985 - 5895
Alignment:
Q  50 ctatttacagagaaagttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctcaaatt 140  Q
    ||||||| |||||||   ||| ||||||| ||||||||||||  || ||| |||||  |||||||||||||||||||||||||||||||||    
T  5985 ctatttatagagaaaaagcacaactaatatgtgagaaactttcggaacaagtaattcacatattagatctagtacaaaaatatctcaaatt 5895  T

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Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 256441 - 256514
Alignment:
Q  19 tttggtgtgtggaaagcactgtgtgagctctctatttacagagaaagttcactactaataagtgagaaactttg 92  Q
    ||||||||||| || ||||| |||||  |||||||||| ||||||  ||||| |||||||||||||||||||||    
T  256441 tttggtgtgtgaaatgcactatgtgatttctctatttatagagaatattcacaactaataagtgagaaactttg 256514  T

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Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 256553 - 256625
Alignment:
Q  108 catattagatctagtacaaaaatatctcaaattgagtctcaaaatatatcatattgagtacaaaaatatattat 181  Q
    ||||||||||||| ||||||||||| |||| ||||||   ||||||||| ||||||||||||||||| ||||||    
T  256553 catattagatctaatacaaaaatatttcaa-ttgagtgcgaaaatatattatattgagtacaaaaatgtattat 256625  T

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Target: scaffold0211 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 27636 - 27590
Alignment:
Q  204 agtatcaaaatatattttagatcatgtactaaaatatattagattgc 250  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||    
T  27636 agtaccaaaatatatttcagatcaagtactaaaatatattagattgc 27590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 23084 - 23040
Alignment:
Q  204 agtatcaaaatatattttagatcatgtactaaaatatattagatt 248  Q
    |||| |||||||||||| |||||| |||| |||||||||||||||    
T  23084 agtaccaaaatatatttcagatcaagtaccaaaatatattagatt 23040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 22325 - 22372
Alignment:
Q  6 atcaactgtgaattttggtgtgtggaaagcactgtgtgagctctctat 53  Q
    ||||||||||||||| ||||||| ||| |||||||||||| |||||||    
T  22325 atcaactgtgaatttcggtgtgtagaatgcactgtgtgagttctctat 22372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 3880 - 3811
Alignment:
Q  66 ttcactactaataagtgagaaactttgagagcaaataattttcatattagatctagtacaaaaatatctc 135  Q
    ||||||||||||  |||||||||||||  | ||| ||| |  ||||||||||||||||| ||||||||||    
T  3880 ttcactactaatttgtgagaaactttggaaacaagtaaatcacatattagatctagtactaaaatatctc 3811  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Original strand, 22400 - 22428
Alignment:
Q  148 aaaatatatcatattgagtacaaaaatat 176  Q
    |||||||||||||||||||||||||||||    
T  22400 aaaatatatcatattgagtacaaaaatat 22428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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