View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3856_high_6 (Length: 658)

Name: NF3856_high_6
Description: NF3856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3856_high_6
NF3856_high_6
[»] chr5 (12 HSPs)
chr5 (18-650)||(8948491-8949120)
chr5 (447-650)||(16668628-16668830)
chr5 (459-554)||(18465485-18465580)
chr5 (415-533)||(28070103-28070220)
chr5 (447-533)||(13362799-13362885)
chr5 (448-533)||(23335657-23335742)
chr5 (446-533)||(2827017-2827104)
chr5 (414-514)||(34329124-34329223)
chr5 (447-521)||(25017179-25017253)
chr5 (447-510)||(33868185-33868248)
chr5 (447-488)||(42512228-42512269)
chr5 (447-483)||(37456710-37456746)
[»] chr6 (9 HSPs)
chr6 (417-650)||(29157226-29157456)
chr6 (446-650)||(18611217-18611420)
chr6 (448-533)||(24737641-24737726)
chr6 (417-517)||(34399641-34399740)
chr6 (417-533)||(33346321-33346436)
chr6 (416-554)||(15034900-15035041)
chr6 (459-533)||(877249-877323)
chr6 (447-493)||(35119264-35119310)
chr6 (447-483)||(7089112-7089148)
[»] chr2 (12 HSPs)
chr2 (460-650)||(4281622-4281811)
chr2 (459-650)||(25995328-25995511)
chr2 (417-533)||(18298061-18298176)
chr2 (411-533)||(20709768-20709889)
chr2 (417-533)||(25192892-25193007)
chr2 (459-514)||(14551288-14551343)
chr2 (447-514)||(4579787-4579854)
chr2 (476-537)||(43822412-43822473)
chr2 (447-510)||(5098746-5098809)
chr2 (447-508)||(36636912-36636973)
chr2 (447-483)||(1292179-1292215)
chr2 (447-483)||(9143615-9143651)
[»] chr1 (14 HSPs)
chr1 (417-650)||(16115851-16116083)
chr1 (447-567)||(35198097-35198217)
chr1 (447-554)||(37639371-37639478)
chr1 (417-533)||(18056784-18056899)
chr1 (417-533)||(22348039-22348154)
chr1 (459-533)||(23320035-23320109)
chr1 (459-533)||(179649-179723)
chr1 (459-533)||(30802437-30802511)
chr1 (447-533)||(45889625-45889711)
chr1 (459-533)||(8402261-8402335)
chr1 (584-650)||(35198002-35198068)
chr1 (447-483)||(11421624-11421660)
chr1 (447-483)||(34369690-34369726)
chr1 (446-510)||(51420374-51420437)
[»] chr4 (15 HSPs)
chr4 (490-650)||(48077699-48077857)
chr4 (448-554)||(50563658-50563764)
chr4 (417-533)||(27764240-27764355)
chr4 (447-533)||(4168387-4168473)
chr4 (446-533)||(637882-637969)
chr4 (447-533)||(22181195-22181281)
chr4 (447-533)||(26447362-26447448)
chr4 (447-533)||(36621651-36621737)
chr4 (417-533)||(45255975-45256090)
chr4 (447-533)||(38485624-38485710)
chr4 (459-533)||(51837041-51837115)
chr4 (417-533)||(21097140-21097255)
chr4 (459-508)||(6386516-6386565)
chr4 (446-494)||(1729604-1729652)
chr4 (419-483)||(29826606-29826669)
[»] chr8 (13 HSPs)
chr8 (447-650)||(15181820-15182028)
chr8 (417-533)||(32987395-32987510)
chr8 (417-533)||(39021975-39022090)
chr8 (417-533)||(7058114-7058229)
chr8 (447-533)||(4836651-4836737)
chr8 (447-533)||(4842096-4842182)
chr8 (447-533)||(7614097-7614183)
chr8 (447-533)||(8550533-8550619)
chr8 (447-533)||(15260801-15260887)
chr8 (417-514)||(1208709-1208805)
chr8 (494-533)||(2750101-2750140)
chr8 (465-506)||(1671850-1671891)
chr8 (447-483)||(41451135-41451171)
[»] chr7 (16 HSPs)
chr7 (447-554)||(5757416-5757523)
chr7 (446-554)||(32090606-32090714)
chr7 (447-533)||(46573450-46573536)
chr7 (417-533)||(30428873-30428988)
chr7 (579-650)||(32090759-32090830)
chr7 (453-533)||(33797966-33798046)
chr7 (417-533)||(46024027-46024142)
chr7 (417-533)||(15974886-15975001)
chr7 (447-514)||(28396751-28396818)
chr7 (417-517)||(12279641-12279740)
chr7 (417-517)||(12279745-12279844)
chr7 (447-514)||(48690924-48690991)
chr7 (459-514)||(48691033-48691088)
chr7 (447-509)||(48305265-48305327)
chr7 (447-508)||(44141226-44141287)
chr7 (578-611)||(5757566-5757599)
[»] chr3 (18 HSPs)
chr3 (419-533)||(50754008-50754121)
chr3 (447-533)||(52987600-52987686)
chr3 (417-533)||(51362388-51362503)
chr3 (459-554)||(23699369-23699464)
chr3 (459-554)||(23717824-23717919)
chr3 (459-554)||(23736280-23736375)
chr3 (417-533)||(8718101-8718216)
chr3 (417-533)||(9069988-9070103)
chr3 (433-533)||(16277364-16277463)
chr3 (416-533)||(19385265-19385381)
chr3 (578-650)||(23755458-23755530)
chr3 (578-645)||(23699507-23699574)
chr3 (578-645)||(23717962-23718029)
chr3 (578-645)||(23736418-23736485)
chr3 (447-533)||(39099226-39099312)
chr3 (447-533)||(7045250-7045336)
chr3 (490-554)||(23755351-23755415)
chr3 (459-517)||(17627197-17627255)
[»] scaffold0097 (1 HSPs)
scaffold0097 (411-533)||(13607-13728)
[»] scaffold0238 (1 HSPs)
scaffold0238 (417-533)||(25182-25297)
[»] scaffold0194 (1 HSPs)
scaffold0194 (447-533)||(27636-27722)
[»] scaffold0337 (1 HSPs)
scaffold0337 (446-517)||(7045-7116)
[»] scaffold0544 (1 HSPs)
scaffold0544 (418-516)||(10642-10739)


Alignment Details
Target: chr5 (Bit Score: 463; Significance: 0; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 18 - 650
Target Start/End: Original strand, 8948491 - 8949120
Alignment:
Q  18 atttctggatgtgtaaagtttaaatataatgtcaaagtactaagtatttcgatgtacttggtattcatcgaaatggtatgtgtatactaagtttaaactc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8948491 atttctggatgtgtaaagtttaaatataatgtcaaagtactaagtatttcgatgtacttagtattcatcgaaatggtatgtgtatactaagtttaaactc 8948590  T
Q  118 atacagagttgtggac---------gtagatcccaaaatcgaattgatctcaatacaacaataaaggttcacatattcataataatgcaaacaataccaa 208  Q
    ||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||    
T  8948591 atacagagttgtggaccattttacagtagatcccaaaatcgaattgatctcaatacaacaataaaggttcacatattcataa---tgcaaacgataccaa 8948687  T
Q  209 atggtttggttttagttgccaaataacatgcataaattcgtccaacacggtcattaatgattgctctaaacaagacatgacgggggacaataatgagaag 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8948688 atggtttggttttagttgccaaataacatgcataaattcgtccaacacggtcattaatgattgctctaaacaagacatgacgggggacaataatgagaag 8948787  T
Q  309 caaatgattttgaattatgttttaaaagtttactttctcatgtcctttttgtttcctacttgctctaaacaagacatgacgtgaaggtccatcaaagacg 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8948788 caaatgattttgaattatgttttaaaagtttactttctcatgtcctttttgtttcctacttgctctaaacaagacatgacgtgaaggtccaccaaagacg 8948887  T
Q  409 tgagtggaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatccta 508  Q
    ||||||||||||||||||||| | |||||  |||||  ||||||      ||||||||||||| ||  ||||||| |||| ||||||||  |||||||||    
T  8948888 tgagtggaggcaaaagttatcatgcataatgaaatc--ttatgc-----gcataaacacttcaaaactatcagatttagtgtacacgtg--ataatccta 8948978  T
Q  509 ggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctct 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||||    
T  8948979 ggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatcttcattttgacaaaaaaaaacctctcactaaaaatgctttgctcacttctct 8949078  T
Q  609 ctctaggacattcaaaccagcgccaccttatatcttcatctc 650  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  8949079 ctctaggacattcaaaccagcgccaccttatatcttcttctc 8949120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 447 - 650
Target Start/End: Complemental strand, 16668830 - 16668628
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 546  Q
    ||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16668830 ttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaagaataaaggaaa 16668731  T
Q  547 gaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttca 646  Q
    |||||||||||| ||||||||          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  16668730 gaggtatatcttcattttgacaaaaaaaac-ctctcactaaaaatgctttgctcacttctctctctaggacattcagaccagcgccaccttatatcttct 16668632  T
Q  647 tctc 650  Q
    ||||    
T  16668631 tctc 16668628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 459 - 554
Target Start/End: Complemental strand, 18465580 - 18465485
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 554  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18465580 cataaacacttcacaaccatcagatctagtgtacacgtgtaataatcttagacttctcaaactacaccaaatcaaggaataaaggaaagaggtata 18465485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 415 - 533
Target Start/End: Complemental strand, 28070220 - 28070103
Alignment:
Q  415 gaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 514  Q
    ||||||||||||||  | |||||| ||||| || ||||||||| ||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||    
T  28070220 gaggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaactatcagatctagtgtacacgtgtaataatcctagacttc 28070122  T
Q  515 tcaaactacaccaaatcaa 533  Q
    |||||||||||||||||||    
T  28070121 tcaaactacaccaaatcaa 28070103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 13362799 - 13362885
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  13362799 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtatacgtgtaataatcataggcttctcaaactacaccaaatcaa 13362885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 448 - 533
Target Start/End: Complemental strand, 23335742 - 23335657
Alignment:
Q  448 tatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  23335742 tatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaactacaccaaatcaa 23335657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 446 - 533
Target Start/End: Complemental strand, 2827104 - 2827017
Alignment:
Q  446 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||| |||||| ||||||||||| |||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  2827104 tttatccaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaattatcttaggcttctcaaactacaccaaatcaa 2827017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 414 - 514
Target Start/End: Original strand, 34329124 - 34329223
Alignment:
Q  414 ggaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggctt 513  Q
    |||||||||||||||  | |||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||    
T  34329124 ggaggcaaaagttatggtgcataaggaaatc-tttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgaataataatcataggctt 34329222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 447 - 521
Target Start/End: Complemental strand, 25017253 - 25017179
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaact 521  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||  |||| ||||||||||    
T  25017253 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattttaggtttctcaaact 25017179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 510
Target Start/End: Original strand, 33868185 - 33868248
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 510  Q
    ||||||||| | |||||||||||||||| |||| ||| || | |||| ||||||||||||||||    
T  33868185 ttatgcaccctgcataaacacttcacaaccatctgatttattttacatgtgtaataatcctagg 33868248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 488
Target Start/End: Original strand, 42512228 - 42512269
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagt 488  Q
    |||| |||||| |||||||||||||||| |||||||||||||    
T  42512228 ttatccaccgtgcataaacacttcacaaccatcagatctagt 42512269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 483
Target Start/End: Original strand, 37456710 - 37456746
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagat 483  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  37456710 ttatgcaccgtacataaacacatcacaaccatcagat 37456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 8e-72; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 417 - 650
Target Start/End: Original strand, 29157226 - 29157456
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||| | || ||| ||||| || ||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||| |||||||||||    
T  29157226 ggcaaaagttatcatgcacaaggaaatcctt-atgcaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaataatactaggcttctc 29157324  T
Q  517 aaactacaccaaatcaaggaataaaggaaagaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctagga 616  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||| || ||||    
T  29157325 aaactacaccaaatcaaggaataaaggaaagaggtatatcttcattttgac--aaaaaaatctctcactaaaaatgctttgctcacttctctatccagga 29157422  T
Q  617 cattcaaaccagcgccaccttatatcttcatctc 650  Q
    ||||||||||||||||||||||||||||| ||||    
T  29157423 cattcaaaccagcgccaccttatatcttcttctc 29157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 446 - 650
Target Start/End: Original strand, 18611217 - 18611420
Alignment:
Q  446 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaa 545  Q
    |||||||||  | |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  18611217 tttatgcactctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaaccacaccaaatcaaggaataaaggaa 18611316  T
Q  546 agaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 645  Q
    ||||||||||||| ||||||||          |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18611317 agaggtatatcttcattttgacaaaaaaaac-ctctcattaaaaatgctttgctcacttctctctctaggacatttaaaccagcgccaccttatatcttc 18611415  T
Q  646 atctc 650  Q
     ||||    
T  18611416 ttctc 18611420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 448 - 533
Target Start/End: Complemental strand, 24737726 - 24737641
Alignment:
Q  448 tatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcttaaactacaccaaatcaa 24737641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 517
Target Start/End: Original strand, 34399641 - 34399740
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34399641 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtatataaacacttcacaatcatcagatctagtgtacacgtgtaataatcctaggcttctc 34399739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 417 - 533
Target Start/End: Complemental strand, 33346436 - 33346321
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||  ||||||||||    
T  33346436 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtgtaataattataggcttctc 33346338  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||  ||||||||    
T  33346337 aaactacgtcaaatcaa 33346321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 416 - 554
Target Start/End: Complemental strand, 15035041 - 15034900
Alignment:
Q  416 aggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggct--- 512  Q
    |||||||||||||  | |||||| ||||| || ||||||||| ||||||   ||||||| ||||||||||||| |||| ||||||||||| ||||||       
T  15035041 aggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaatcattcacaaccatcagatctagtgtacatgtgtaataatcataggcttct 15034943  T
Q  513 --tctcaaactacaccaaatcaaggaataaaggaaagaggtata 554  Q
      ||||||||||||||||||||||||||||| ||||||||||||    
T  15034942 cctctcaaactacaccaaatcaaggaataaa-gaaagaggtata 15034900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 459 - 533
Target Start/End: Original strand, 877249 - 877323
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||||||||| ||| |||||  || ||||||| |||||||| || ||||||||||||||||||||||||    
T  877249 cataaacacttcacaaccattagatcaggtgtacacgtataataatcataagcttctcaaactacaccaaatcaa 877323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 493
Target Start/End: Original strand, 35119264 - 35119310
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtataca 493  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  35119264 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 35119310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 483
Target Start/End: Original strand, 7089112 - 7089148
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagat 483  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7089112 ttatgcaccgtgcataaacacatcacaatcatcagat 7089148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 8e-66; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 460 - 650
Target Start/End: Complemental strand, 4281811 - 4281622
Alignment:
Q  460 ataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatcttt 559  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||     
T  4281811 ataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggtttctcaaactacagcaaatcaaggaataaaggaaagaggtatatcttc 4281712  T
Q  560 attttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 650  Q
    ||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  4281711 attttgacaaaaaaaac-ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgtcaccttatatcttcttctc 4281622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 459 - 650
Target Start/End: Original strand, 25995328 - 25995511
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatctt 558  Q
    |||||| ||||||||| |||||||| |||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||            
T  25995328 cataaatacttcacaaccatcagatttagtgtacacgtgtaataatcctaggctactcaaattacaccaaatcaaggaataaaggaaatagg-------- 25995419  T
Q  559 tattttgac--nnnnnnnnntctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 650  Q
      |||||||            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25995420 --ttttgacaaaaaaaaaaacctctcactaaaaatgctttgttcacttctctctctaggacattcaaaccagcgccaccttatatcttcttctc 25995511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 417 - 533
Target Start/End: Complemental strand, 18298176 - 18298061
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  18298176 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 18298078  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  18298077 aaactacaccaaatcaa 18298061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 411 - 533
Target Start/End: Original strand, 20709768 - 20709889
Alignment:
Q  411 agtggaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 510  Q
    ||||| ||||||||||||  | |||||| ||||| || || |||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||| |    
T  20709768 agtggtggcaaaagttatggtgcataaggaaatcctt-atccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacg 20709866  T
Q  511 cttctcaaactacaccaaatcaa 533  Q
    |||||||||||||||||||||||    
T  20709867 cttctcaaactacaccaaatcaa 20709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 25192892 - 25193007
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||| |||||||||||    
T  25192892 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccattagatctagtgtacacgtgtaataattctaggcttctc 25192990  T
Q  517 aaactacaccaaatcaa 533  Q
    ||| |||||||||||||    
T  25192991 aaattacaccaaatcaa 25193007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 14551343 - 14551288
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 514  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  14551343 cataaacacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttc 14551288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 447 - 514
Target Start/End: Complemental strand, 4579854 - 4579787
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 514  Q
    ||||||||| | ||||||||||| |||| ||||||||||||| |||||||||||||||| || |||||    
T  4579854 ttatgcaccatgcataaacactttacaaccatcagatctagtgtacacgtgtaataatcttatgcttc 4579787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 537
Target Start/End: Original strand, 43822412 - 43822473
Alignment:
Q  476 catcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaa 537  Q
    ||||||||||||| ||||||||| ||||||||||| |||| ||| ||||| |||||||||||    
T  43822412 catcagatctagtgtacacgtgtgataatcctaggtttcttaaattacacaaaatcaaggaa 43822473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 510
Target Start/End: Original strand, 5098746 - 5098809
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 510  Q
    ||||||||| | |||||||||||||||| ||||| || || | |||||||||||||||||||||    
T  5098746 ttatgcaccctgcataaacacttcacaaccatcaaatttattgtacacgtgtaataatcctagg 5098809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 508
Target Start/End: Complemental strand, 36636973 - 36636912
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatccta 508  Q
    ||||| ||| |||||||||||||||||| |||||||| |  | |||||||||||||||||||    
T  36636973 ttatgtaccctacataaacacttcacaaccatcagatttgttttacacgtgtaataatccta 36636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 483
Target Start/End: Complemental strand, 1292215 - 1292179
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagat 483  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  1292215 ttatgcaccgtacataaacacatcacaaccatcagat 1292179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 483
Target Start/End: Original strand, 9143615 - 9143651
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagat 483  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9143615 ttatgcaccgtgcataaacacatcacaatcatcagat 9143651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 1e-55; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 417 - 650
Target Start/End: Original strand, 16115851 - 16116083
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||| | |||||| ||||| || ||||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||| || |||||     
T  16115851 ggcaaaagttatcatgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcaaatctaatgtacacgtgtaataatccaagacttctt 16115949  T
Q  517 aaactacaccaaatcaaggaataaaggaaagaggtatatctttattttgacnnnnnnnnntctctcactaaaaatgctttgctcacttctctctctagga 616  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||          |||||||| |||||| |||  ||||||||||||||||||    
T  16115950 aaactacaccaaatcaaggaataaaggaaagaggtatatcttcatttttacaaaaaaaaacctctcactgaaaatgttttcgtcacttctctctctagga 16116049  T
Q  617 cattcaaaccagcgccaccttatatcttcatctc 650  Q
    ||||||||||| ||| ||||||||||||| ||||    
T  16116050 cattcaaaccaacgcgaccttatatcttcttctc 16116083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 447 - 567
Target Start/End: Complemental strand, 35198217 - 35198097
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 546  Q
    ||||||||| | |||||||||||||||  ||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||    
T  35198217 ttatgcaccctgcataaacacttcacagccatcagatctagtgtacacgtgtaataatcctagacttttcaaactacacaaaatcaagaaataaaggaaa 35198118  T
Q  547 gaggtatatctttattttgac 567  Q
    |||||||||||| ||||||||    
T  35198117 gaggtatatcttcattttgac 35198097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 447 - 554
Target Start/End: Original strand, 37639371 - 37639478
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 546  Q
    ||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  37639371 ttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattatagacttctcaaactacaccaaatcaaggaataaaggaaa 37639470  T
Q  547 gaggtata 554  Q
    ||||||||    
T  37639471 gaggtata 37639478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 18056784 - 18056899
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  18056784 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 18056882  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  18056883 aaactacaccaaatcaa 18056899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 22348039 - 22348154
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||  |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  22348039 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgcgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctaggcttctc 22348137  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  22348138 aaactacaccaaatcaa 22348154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 459 - 533
Target Start/End: Complemental strand, 23320109 - 23320035
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  23320109 cataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaa 23320035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 459 - 533
Target Start/End: Original strand, 179649 - 179723
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  179649 cataaacacttcacaaccatcagatctagtgtacacgtgtaataatcccaagcttctcaaactacaccaaatcaa 179723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 459 - 533
Target Start/End: Original strand, 30802437 - 30802511
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  30802437 cataaacatttcacaaccatcagatctagtgtacacgtgtaataatcttaggcttctcaaactacaccaaatcaa 30802511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 45889625 - 45889711
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||| |||||| |||||||| || |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  45889625 ttatccaccgtgcataaacattttacaaccatcagatctagtatacatgtgtaataatcttaggcttctcaaactacaccaaatcaa 45889711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 459 - 533
Target Start/End: Complemental strand, 8402335 - 8402261
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||||| || ||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  8402335 cataaacacttcataaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactaaaccaaatcaa 8402261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 584 - 650
Target Start/End: Complemental strand, 35198068 - 35198002
Alignment:
Q  584 ctaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 650  Q
    |||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  35198068 ctaaaaatactttgctcacttctctatttaggacattcaaaccagcgccaccttatatcttcttctc 35198002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 483
Target Start/End: Original strand, 11421624 - 11421660
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagat 483  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  11421624 ttatgcaccgtgcataaacacttcacaaccatcagat 11421660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 483
Target Start/End: Original strand, 34369690 - 34369726
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagat 483  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  34369690 ttatgcaccgtgcataaacacttcacaaccatcagat 34369726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 446 - 510
Target Start/End: Original strand, 51420374 - 51420437
Alignment:
Q  446 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 510  Q
    |||||||| | | |||||||| ||||||| |||||||| || |||||||| ||||||||||||||    
T  51420374 tttatgcatcctgcataaaca-ttcacaaccatcagatttattatacacgagtaataatcctagg 51420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 3e-50; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 490 - 650
Target Start/End: Complemental strand, 48077857 - 48077699
Alignment:
Q  490 tacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtatatctttattttgacnnnnnnnnntctctcactaaaa 589  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||          |||||| |||||    
T  48077857 tacatgtgtaataatcctaggcttctcaaactacaccaaattaaggaataaaggaaagaggtatatcttcattttgacaaaaaaac--ctctcattaaaa 48077760  T
Q  590 atgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 650  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  48077759 atgctttgctcacttctctctctaggacattcaaaccagcaccaccttatatcttcttctc 48077699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 448 - 554
Target Start/End: Complemental strand, 50563764 - 50563658
Alignment:
Q  448 tatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaag 547  Q
    |||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  50563764 tatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattataggtttctcaaactacaccaaatcaaggaataaaggaaag 50563665  T
Q  548 aggtata 554  Q
    |||||||    
T  50563664 aggtata 50563658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 27764240 - 27764355
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||    
T  27764240 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcgcaaccatcagatctagtgtacacgtgtaataatcctacgcttctc 27764338  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  27764339 aaactacaccaaatcaa 27764355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 4168387 - 4168473
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  4168387 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactacaccaaatcaa 4168473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 533
Target Start/End: Original strand, 637882 - 637969
Alignment:
Q  446 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||    
T  637882 tttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataattttaggcttctcaaactacaccaaatcaa 637969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 22181281 - 22181195
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||| ||||||||| |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  22181281 ttatgcaccgtgcataaaaacttcacaaccatcagatttagtgtacacgtgtaataatcctaggtttctcaaactacaccaaatcaa 22181195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 26447448 - 26447362
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||    
T  26447448 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcacaaattacaccaaatcaa 26447362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 36621737 - 36621651
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||| |||||| |||||||||||||||||    
T  36621737 ttatgcaccgtgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcctatgcttcttaaactacaccaaatcaa 36621651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 45255975 - 45256090
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||||||| ||    
T  45255975 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaactatcagatatagtgtacacgtgtaataatcctaggcttttc 45256073  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||| ||||||||    
T  45256074 aaactacatcaaatcaa 45256090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 38485710 - 38485624
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| ||||||| |||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||  |||||||    
T  38485710 ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgtacacgtgtaataatcctaggcttctcaaaatacattaaatcaa 38485624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 459 - 533
Target Start/End: Complemental strand, 51837115 - 51837041
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||| ||||||||| |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||    
T  51837115 cataaatacttcacaaccatcagatttaatgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 51837041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 21097140 - 21097255
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||| | | |||||| ||||| || |||||||||  ||||||||||||||| ||| ||||||||| ||||||||||||||| ||| |||| |     
T  21097140 ggcaaaagttaccgtgcataaggaaatcctt-atgcaccgtgtataaacacttcacaaccattagatctagtttacacgtgtaataattctaagcttatt 21097238  T
Q  517 aaactacaccaaatcaa 533  Q
    ||| |||||||||||||    
T  21097239 aaattacaccaaatcaa 21097255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 508
Target Start/End: Complemental strand, 6386565 - 6386516
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatccta 508  Q
    |||||||||||||||| |||||||| ||||  ||||||||||||||||||    
T  6386565 cataaacacttcacaaccatcagatttagtggacacgtgtaataatccta 6386516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 446 - 494
Target Start/End: Complemental strand, 1729652 - 1729604
Alignment:
Q  446 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacac 494  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  1729652 tttatacaccgtgcataaacacttcacaaccatcagatctagtgtacac 1729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 483
Target Start/End: Complemental strand, 29826669 - 29826606
Alignment:
Q  419 caaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagat 483  Q
    ||||||||||  |||||||| ||||| || ||||||||| ||||| |||||||||| ||||||||    
T  29826669 caaaagttatggtacataaggaaatcctt-atgcaccgtgcataagcacttcacaaccatcagat 29826606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 650
Target Start/End: Original strand, 15181820 - 15182028
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 546  Q
    ||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||||    
T  15181820 ttatgcaccctgcataaacacttcacaagcatcagatctagtgtacacgtgtaataatcttaggtttctcaaactacaccaaatcaag-aatataggaaa 15181918  T
Q  547 gaggtatatctttattttgacnnnnnnnnnt---------ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccacctt 637  Q
    |   |||||||| ||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15181919 g---tatatcttcattttgacaaaaaaaaaaaaaaaaaacctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccacctt 15182015  T
Q  638 atatcttcatctc 650  Q
    |||||||| ||||    
T  15182016 atatcttcttctc 15182028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 417 - 533
Target Start/End: Complemental strand, 32987510 - 32987395
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  32987510 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 32987412  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  32987411 aaactacaccaaatcaa 32987395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 39021975 - 39022090
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  39021975 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaatcatcagatctagtgtacatgtgtaataatcctaggcttctc 39022073  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  39022074 aaactacaccaaatcaa 39022090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 7058114 - 7058229
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| |||| | ||||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||||    
T  7058114 ggcaaaagttatggtgcataaggaaat-acttatgcaccgtgcataaacacttcacaaccatccgatctagtgtacacgtgtaataatcctagacttctc 7058212  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  7058213 aaactacaccaaatcaa 7058229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 4836737 - 4836651
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  4836737 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaactacaccaaatcaa 4836651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 4842182 - 4842096
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  4842182 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaactacaccaaatcaa 4842096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 7614097 - 7614183
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||| | |||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  7614097 ttatgcaccatgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcataggcttctcaaactacaccaaatcaa 7614183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 8550533 - 8550619
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||||| |||||||||||||    
T  8550533 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataagcttctcaaattacaccaaatcaa 8550619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 15260887 - 15260801
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  15260887 ttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtttaataatccaaggcttctcaaactacaccaaatcaa 15260801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 417 - 514
Target Start/End: Original strand, 1208709 - 1208805
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 514  Q
    ||||||||||||  | |||||| ||||| || ||||||||| ||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||    
T  1208709 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacactttacaaccataagatctagtgtacacgtgtaataatcctaggcttc 1208805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 533
Target Start/End: Original strand, 2750101 - 2750140
Alignment:
Q  494 cgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  2750101 cgtgtaataatcatagacttctcaaactacaccaaatcaa 2750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 506
Target Start/End: Original strand, 1671850 - 1671891
Alignment:
Q  465 cacttcacaatcatcagatctagtatacacgtgtaataatcc 506  Q
    ||||||||||||||||||| |||| || ||||||||||||||    
T  1671850 cacttcacaatcatcagatttagtgtatacgtgtaataatcc 1671891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 483
Target Start/End: Original strand, 41451135 - 41451171
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagat 483  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  41451135 ttatgcaccgtgcataaacacgtcacaatcatcagat 41451171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 554
Target Start/End: Original strand, 5757416 - 5757523
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaa 546  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5757416 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaggaataaaggaaa 5757515  T
Q  547 gaggtata 554  Q
    ||||||||    
T  5757516 gaggtata 5757523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 446 - 554
Target Start/End: Original strand, 32090606 - 32090714
Alignment:
Q  446 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaa 545  Q
    |||||||||| | |||||||| |||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32090606 tttatgcaccctgcataaacaattcagaaccatcaaatctagtatacacgtgtaataatcataggcttctcaaactacaccaaatcaaggaataaaggaa 32090705  T
Q  546 agaggtata 554  Q
    |||||||||    
T  32090706 agaggtata 32090714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 46573536 - 46573450
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46573536 ttatgcaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 46573450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 30428873 - 30428988
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  30428873 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctc 30428971  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  30428972 aaactacaccaaatcaa 30428988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 32090759 - 32090830
Alignment:
Q  579 tctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 650  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32090759 tctcactaaaaatgccttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcttctc 32090830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 453 - 533
Target Start/End: Original strand, 33797966 - 33798046
Alignment:
Q  453 accgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33797966 accgtgcataaacatttcacaaccatcagatctagtatacacgtgtaataatcctagacttctcaaactacatcaaatcaa 33798046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 46024027 - 46024142
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | || ||||||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||| ||||||    
T  46024027 ggcaaaagttatggtgcacaagaaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatatagtgtacacgtgtaataatcctagacttctc 46024125  T
Q  517 aaactacaccaaatcaa 533  Q
    ||||||||  |||||||    
T  46024126 aaactacattaaatcaa 46024142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 417 - 533
Target Start/End: Complemental strand, 15975001 - 15974886
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| ||||| || |||| ||||| |||||||||| ||||||| ||    
T  15975001 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcatatttagtgtacacatgtaataatcttaggcttatc 15974903  T
Q  517 aaactacaccaaatcaa 533  Q
    ||| |||||||||||||    
T  15974902 aaagtacaccaaatcaa 15974886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 28396751 - 28396818
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 514  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||    
T  28396751 ttatgcaccgtgcataaacatttcacaatcatcagatctagtgtacaagagtaataatcctaggcttc 28396818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 517
Target Start/End: Original strand, 12279641 - 12279740
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  |||||||| |||||||| |||||||||  ||||| ||||||||| ||| ||||| ||| |||||||||||| ||||||||| ||||    
T  12279641 ggcaaaagttatggtacataaggaaatcatt-atgcaccgtgtataaagacttcacaaccattagatccagtgtacacgtgtaatgatcctaggcctctc 12279739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 517
Target Start/End: Original strand, 12279745 - 12279844
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| |||||||||||| |||||| ||||||||| ||| ||||||||| || ||||||||| ||||||||| ||||    
T  12279745 ggcaaaagttatggtgcataaggaaatc-tttatgcaccgtgcataaagacttcacaaccattagatctagtgtatacgtgtaatgatcctaggcctctc 12279843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 447 - 514
Target Start/End: Original strand, 48690924 - 48690991
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 514  Q
    ||||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  48690924 ttatgcaccgtgcataaacagttcacaaccatcaaatctagtgtacacgtgtaataatcataggcttc 48690991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 48691033 - 48691088
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttc 514  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  48691033 catagacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 48691088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 447 - 509
Target Start/End: Original strand, 48305265 - 48305327
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctag 509  Q
    ||||||||||| ||||||||||| |||| |||| |||||||| ||||||| ||||||||||||    
T  48305265 ttatgcaccgtgcataaacactttacaaacatcggatctagtgtacacgtataataatcctag 48305327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 447 - 508
Target Start/End: Complemental strand, 44141287 - 44141226
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatccta 508  Q
    ||||||||| | |||||||||||||||| |||| ||| |||| |||||||||||||||||||    
T  44141287 ttatgcaccctgcataaacacttcacaaccatctgatttagtgtacacgtgtaataatccta 44141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 578 - 611
Target Start/End: Original strand, 5757566 - 5757599
Alignment:
Q  578 ctctcactaaaaatgctttgctcacttctctctc 611  Q
    ||||| ||||||||||||||||||||||||||||    
T  5757566 ctctcgctaaaaatgctttgctcacttctctctc 5757599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 419 - 533
Target Start/End: Original strand, 50754008 - 50754121
Alignment:
Q  419 caaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaa 518  Q
    ||||||||||  |||||||| ||||| || ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  50754008 caaaagttatggtacataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaa 50754106  T
Q  519 actacaccaaatcaa 533  Q
    |||||||||||||||    
T  50754107 actacaccaaatcaa 50754121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 52987686 - 52987600
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52987686 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 52987600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 417 - 533
Target Start/End: Complemental strand, 51362503 - 51362388
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  51362503 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataatcctaggcttctc 51362405  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  51362404 aaactacaccaaatcaa 51362388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 459 - 554
Target Start/End: Original strand, 23699369 - 23699464
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 554  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23699369 cataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaaggaataaaggaaagaggtata 23699464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 459 - 554
Target Start/End: Original strand, 23717824 - 23717919
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 554  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23717824 cataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaaggaataaaggaaagaggtata 23717919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 459 - 554
Target Start/End: Original strand, 23736280 - 23736375
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 554  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23736280 cataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaaggaataaaggaaagaggtata 23736375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 8718101 - 8718216
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || |||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||     
T  8718101 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctt 8718199  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  8718200 aaactacaccaaatcaa 8718216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 533
Target Start/End: Original strand, 9069988 - 9070103
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || |||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||     
T  9069988 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctt 9070086  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  9070087 aaactacaccaaatcaa 9070103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 433 - 533
Target Start/End: Complemental strand, 16277463 - 16277364
Alignment:
Q  433 cataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatca 532  Q
    |||||| ||||| |||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  16277463 cataaggaaatc-tttatgcaccgtgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatca 16277365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 416 - 533
Target Start/End: Complemental strand, 19385381 - 19385265
Alignment:
Q  416 aggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttct 515  Q
    |||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||    
T  19385381 aggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataattctaggcttct 19385283  T
Q  516 caaactacaccaaatcaa 533  Q
    ||||||||| ||||||||    
T  19385282 caaactacatcaaatcaa 19385265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 578 - 650
Target Start/End: Original strand, 23755458 - 23755530
Alignment:
Q  578 ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttcatctc 650  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  23755458 ctctcactaaaaatgctttgctcacttctctctctagaacattcaaaccagcgccaccttatatcttcttctc 23755530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 645
Target Start/End: Original strand, 23699507 - 23699574
Alignment:
Q  578 ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 645  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23699507 ctctcactaaaaatactttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 23699574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 645
Target Start/End: Original strand, 23717962 - 23718029
Alignment:
Q  578 ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 645  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23717962 ctctcactaaaaatactttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 23718029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 578 - 645
Target Start/End: Original strand, 23736418 - 23736485
Alignment:
Q  578 ctctcactaaaaatgctttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 645  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23736418 ctctcactaaaaatactttgctcacttctctctctaggacattcaaaccagcgccaccttatatcttc 23736485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 39099226 - 39099312
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||||||||| |||||| | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  39099226 ttatgcaccgtgcataaatatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacactaaatcaa 39099312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 7045336 - 7045250
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    |||||||||||  ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| |||||| ||||||||    
T  7045336 ttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttctcagactacatcaaatcaa 7045250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 23755351 - 23755415
Alignment:
Q  490 tacacgtgtaataatcctaggcttctcaaactacaccaaatcaaggaataaaggaaagaggtata 554  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23755351 tacacgtgtaataatcctaggcttctcaaattacatcaaatcaaggaataaaggaaagaggtata 23755415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 459 - 517
Target Start/End: Complemental strand, 17627255 - 17627197
Alignment:
Q  459 cataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctca 517  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||    
T  17627255 cataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggtttctca 17627197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 411 - 533
Target Start/End: Original strand, 13607 - 13728
Alignment:
Q  411 agtggaggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctagg 510  Q
    ||||| ||||||||||||  | |||||| ||||| || || |||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||| |    
T  13607 agtggtggcaaaagttatggtgcataaggaaatcctt-atccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacg 13705  T
Q  511 cttctcaaactacaccaaatcaa 533  Q
    |||||||||||||||||||||||    
T  13706 cttctcaaactacaccaaatcaa 13728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 417 - 533
Target Start/End: Complemental strand, 25297 - 25182
Alignment:
Q  417 ggcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    ||||||||||||  | |||||| ||||| || ||||||||| |||||||||||||||| |||||||| |||| ||||||||| |||||| |||| |||||    
T  25297 ggcaaaagttatggtgcataaggaaatcctt-atgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtcataatcttaggtttctc 25199  T
Q  517 aaactacaccaaatcaa 533  Q
    |||||||||||||||||    
T  25198 aaactacaccaaatcaa 25182  T

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Target: scaffold0194 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 27636 - 27722
Alignment:
Q  447 ttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctcaaactacaccaaatcaa 533  Q
    ||||| ||||| ||||||||||||||||  || ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  27636 ttatgtaccgtgcataaacacttcacaactataagatctagtgtacacgtgtaataattctaggcttctcaaactacaccaaatcaa 27722  T

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Target: scaffold0337 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 446 - 517
Target Start/End: Original strand, 7045 - 7116
Alignment:
Q  446 tttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctca 517  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||    
T  7045 tttatacaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctca 7116  T

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Target: scaffold0544 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 418 - 516
Target Start/End: Complemental strand, 10739 - 10642
Alignment:
Q  418 gcaaaagttatcctacataagaaaatcatttatgcaccgtacataaacacttcacaatcatcagatctagtatacacgtgtaataatcctaggcttctc 516  Q
    |||||||||||  | |||||| ||||| || || |||||| |||||||||||||||| ||||||||||||| | ||  ||||||||||||||| |||||    
T  10739 gcaaaagttatggtgcataaggaaatcctt-atacaccgtgcataaacacttcacaaccatcagatctagtgtgcatatgtaataatcctaggtttctc 10642  T

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