View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3856_low_46 (Length: 303)

Name: NF3856_low_46
Description: NF3856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3856_low_46
NF3856_low_46
[»] chr7 (63 HSPs)
chr7 (99-292)||(30941505-30941699)
chr7 (107-289)||(42850226-42850410)
chr7 (12-106)||(38073299-38073393)
chr7 (1-104)||(38861164-38861267)
chr7 (3-73)||(31445388-31445458)
chr7 (3-73)||(35072293-35072363)
chr7 (1-77)||(38956545-38956621)
chr7 (1-77)||(44895499-44895575)
chr7 (3-73)||(35098634-35098704)
chr7 (1-75)||(41189472-41189546)
chr7 (3-74)||(40417844-40417915)
chr7 (3-74)||(48062127-48062198)
chr7 (1-74)||(22918099-22918172)
chr7 (1-73)||(43025408-43025480)
chr7 (1-75)||(40112883-40112957)
chr7 (1-104)||(43942705-43942815)
chr7 (3-63)||(4292498-4292558)
chr7 (14-74)||(35207582-35207642)
chr7 (3-75)||(35822903-35822975)
chr7 (3-63)||(36352525-36352585)
chr7 (1-77)||(44189237-44189313)
chr7 (7-66)||(12007123-12007182)
chr7 (14-73)||(22925215-22925274)
chr7 (14-77)||(25192844-25192907)
chr7 (3-98)||(40854560-40854655)
chr7 (4-75)||(46578064-46578135)
chr7 (5-74)||(10700116-10700184)
chr7 (4-77)||(24614243-24614316)
chr7 (3-77)||(41989667-41989743)
chr7 (3-104)||(48145595-48145696)
chr7 (3-75)||(41018734-41018806)
chr7 (3-63)||(41430092-41430152)
chr7 (3-75)||(43159504-43159575)
chr7 (16-77)||(3937050-3937111)
chr7 (3-40)||(24532906-24532943)
chr7 (14-67)||(30064520-30064573)
chr7 (3-40)||(34507169-34507206)
chr7 (4-75)||(45851136-45851204)
chr7 (7-39)||(33057454-33057486)
chr7 (14-74)||(41863559-41863619)
chr7 (3-63)||(42584873-42584933)
chr7 (3-66)||(3683602-3683665)
chr7 (69-104)||(3937011-3937046)
chr7 (3-66)||(17002407-17002470)
chr7 (31-74)||(46022197-46022240)
chr7 (3-74)||(47391255-47391326)
chr7 (12-66)||(29723862-29723916)
chr7 (4-38)||(34978368-34978402)
chr7 (4-38)||(45420026-45420060)
chr7 (3-75)||(1471219-1471292)
chr7 (7-40)||(19643398-19643431)
chr7 (3-40)||(27568088-27568125)
chr7 (12-49)||(30941469-30941506)
chr7 (70-103)||(32529745-32529778)
chr7 (1-77)||(32529783-32529857)
chr7 (11-40)||(32952414-32952443)
chr7 (3-40)||(38939943-38939980)
chr7 (3-60)||(39497245-39497302)
chr7 (75-104)||(40112842-40112871)
chr7 (14-74)||(36207117-36207177)
chr7 (3-39)||(36533798-36533834)
chr7 (3-74)||(44649258-44649327)
chr7 (3-39)||(49128945-49128981)
[»] chr3 (108 HSPs)
chr3 (1-104)||(41505559-41505662)
chr3 (3-104)||(33791670-33791771)
chr3 (1-77)||(41309185-41309261)
chr3 (1-75)||(5114146-5114220)
chr3 (1-77)||(20547917-20547993)
chr3 (14-81)||(44413845-44413912)
chr3 (3-77)||(35377008-35377082)
chr3 (3-77)||(37503674-37503748)
chr3 (1-77)||(27541429-27541505)
chr3 (1-101)||(32205663-32205763)
chr3 (1-77)||(42358565-42358641)
chr3 (1-104)||(45000131-45000228)
chr3 (1-77)||(52254065-52254141)
chr3 (3-74)||(13348064-13348135)
chr3 (1-76)||(38926696-38926771)
chr3 (1-76)||(52939719-52939794)
chr3 (3-77)||(5244299-5244373)
chr3 (2-104)||(44856022-44856136)
chr3 (3-104)||(288796-288909)
chr3 (1-77)||(26014880-26014956)
chr3 (1-73)||(45711370-45711442)
chr3 (1-77)||(46623975-46624051)
chr3 (3-77)||(35597232-35597306)
chr3 (43-101)||(50318292-50318350)
chr3 (12-77)||(42357011-42357076)
chr3 (1-77)||(36670941-36671017)
chr3 (3-79)||(55361158-55361234)
chr3 (3-74)||(37056987-37057058)
chr3 (3-74)||(51982169-51982240)
chr3 (3-77)||(28539667-28539741)
chr3 (1-77)||(16969493-16969569)
chr3 (1-77)||(19149058-19149134)
chr3 (3-71)||(42889055-42889123)
chr3 (1-77)||(44413322-44413398)
chr3 (1-77)||(47472397-47472473)
chr3 (3-99)||(55322621-55322717)
chr3 (6-77)||(24256698-24256769)
chr3 (3-74)||(34627811-34627882)
chr3 (2-77)||(37302615-37302690)
chr3 (3-98)||(52714804-52714899)
chr3 (4-67)||(55151654-55151717)
chr3 (3-57)||(6178372-6178426)
chr3 (3-65)||(50876301-50876363)
chr3 (1-104)||(52326087-52326202)
chr3 (20-77)||(32924208-32924265)
chr3 (1-66)||(34456859-34456924)
chr3 (3-68)||(44463427-44463492)
chr3 (1-77)||(7668115-7668190)
chr3 (4-40)||(9692797-9692833)
chr3 (3-79)||(12762614-12762690)
chr3 (69-105)||(32924168-32924204)
chr3 (14-62)||(35299816-35299864)
chr3 (3-75)||(36755979-36756051)
chr3 (3-71)||(39629771-39629839)
chr3 (69-104)||(13735878-13735913)
chr3 (15-74)||(14226635-14226694)
chr3 (7-66)||(32145923-32145982)
chr3 (1-77)||(33939304-33939382)
chr3 (69-104)||(33939386-33939421)
chr3 (69-104)||(52939799-52939834)
chr3 (4-66)||(4494174-4494236)
chr3 (70-104)||(7934123-7934157)
chr3 (3-77)||(8847180-8847254)
chr3 (70-104)||(19149139-19149173)
chr3 (3-45)||(48346897-48346939)
chr3 (3-37)||(48353067-48353101)
chr3 (3-49)||(50314695-50314741)
chr3 (1-77)||(7934043-7934118)
chr3 (4-40)||(19150283-19150319)
chr3 (3-74)||(23592534-23592599)
chr3 (3-63)||(26452663-26452723)
chr3 (14-62)||(32587739-32587787)
chr3 (11-67)||(35201371-35201427)
chr3 (7-39)||(39714001-39714033)
chr3 (69-101)||(42358529-42358561)
chr3 (21-73)||(49087038-49087090)
chr3 (3-35)||(54099325-54099357)
chr3 (31-74)||(21217610-21217653)
chr3 (3-38)||(28700531-28700566)
chr3 (73-104)||(31157565-31157596)
chr3 (2-64)||(36121890-36121953)
chr3 (3-74)||(37894171-37894242)
chr3 (69-104)||(38926776-38926811)
chr3 (69-104)||(44413283-44413318)
chr3 (28-75)||(44445389-44445436)
chr3 (3-62)||(46966042-46966101)
chr3 (1-39)||(6093843-6093881)
chr3 (1-71)||(16129590-16129660)
chr3 (1-35)||(32322065-32322099)
chr3 (4-38)||(41443156-41443190)
chr3 (20-74)||(51465671-51465725)
chr3 (16-57)||(3518554-3518595)
chr3 (6-35)||(8502859-8502888)
chr3 (7-40)||(31104739-31104772)
chr3 (1-74)||(42997353-42997426)
chr3 (3-64)||(44813387-44813448)
chr3 (18-75)||(49780669-49780726)
chr3 (69-101)||(7668079-7668111)
chr3 (10-38)||(14207223-14207251)
chr3 (10-38)||(14214971-14214999)
chr3 (3-39)||(39338692-39338728)
chr3 (76-104)||(41309272-41309300)
chr3 (30-74)||(44383286-44383330)
chr3 (3-63)||(48944651-48944711)
chr3 (3-35)||(50559180-50559212)
chr3 (2-34)||(51465884-51465916)
chr3 (2-38)||(52937252-52937288)
chr3 (10-38)||(54260169-54260197)
[»] chr4 (108 HSPs)
chr4 (1-104)||(2268407-2268510)
chr4 (1-104)||(46634168-46634271)
chr4 (1-73)||(37997322-37997394)
chr4 (1-104)||(29531506-29531609)
chr4 (1-77)||(27051013-27051089)
chr4 (3-77)||(50608551-50608625)
chr4 (1-77)||(10250442-10250518)
chr4 (1-77)||(11068756-11068832)
chr4 (1-77)||(24575778-24575854)
chr4 (1-77)||(40348862-40348938)
chr4 (3-73)||(7632392-7632462)
chr4 (3-77)||(38376417-38376491)
chr4 (46-104)||(42360269-42360327)
chr4 (1-77)||(29175295-29175369)
chr4 (4-77)||(39440555-39440628)
chr4 (3-77)||(39478505-39478581)
chr4 (5-74)||(50831685-50831754)
chr4 (1-77)||(26732293-26732369)
chr4 (1-77)||(37297117-37297192)
chr4 (3-104)||(43175054-43175167)
chr4 (3-74)||(42853647-42853718)
chr4 (12-74)||(39654903-39654965)
chr4 (3-73)||(50721675-50721745)
chr4 (1-77)||(53801686-53801760)
chr4 (1-77)||(23369259-23369335)
chr4 (1-77)||(51986110-51986186)
chr4 (1-101)||(25123178-25123274)
chr4 (3-77)||(1627485-1627559)
chr4 (3-73)||(19232065-19232134)
chr4 (3-77)||(31641492-31641566)
chr4 (13-74)||(56474697-56474758)
chr4 (3-75)||(10474041-10474113)
chr4 (1-77)||(38134421-38134497)
chr4 (14-77)||(2575717-2575780)
chr4 (3-62)||(12387607-12387666)
chr4 (14-77)||(44539815-44539878)
chr4 (7-66)||(51255821-51255880)
chr4 (4-66)||(5386444-5386506)
chr4 (3-40)||(16019547-16019584)
chr4 (1-77)||(5622526-5622602)
chr4 (1-73)||(15175614-15175686)
chr4 (3-63)||(31574880-31574940)
chr4 (3-74)||(34616637-34616702)
chr4 (1-77)||(36177974-36178050)
chr4 (1-73)||(46213038-46213110)
chr4 (3-62)||(52895298-52895358)
chr4 (3-74)||(19473886-19473957)
chr4 (69-104)||(26732373-26732408)
chr4 (3-38)||(26910272-26910307)
chr4 (69-104)||(27965133-27965168)
chr4 (3-74)||(38381006-38381077)
chr4 (7-66)||(38519868-38519927)
chr4 (6-77)||(39195130-39195201)
chr4 (69-104)||(51986190-51986225)
chr4 (69-104)||(53786103-53786138)
chr4 (4-66)||(18316009-18316071)
chr4 (4-38)||(51577686-51577720)
chr4 (3-67)||(11672060-11672122)
chr4 (14-104)||(26724860-26724962)
chr4 (1-77)||(27965055-27965129)
chr4 (3-64)||(35897771-35897832)
chr4 (10-63)||(42395978-42396031)
chr4 (7-40)||(52204925-52204958)
chr4 (4-40)||(1816639-1816675)
chr4 (69-105)||(15175694-15175730)
chr4 (5-77)||(21775269-21775341)
chr4 (3-62)||(28458318-28458378)
chr4 (2-38)||(38338888-38338924)
chr4 (3-74)||(38382397-38382462)
chr4 (3-75)||(48796462-48796533)
chr4 (3-38)||(336773-336808)
chr4 (3-74)||(11546830-11546901)
chr4 (14-77)||(26492088-26492151)
chr4 (3-74)||(27354284-27354355)
chr4 (69-104)||(29175373-29175408)
chr4 (3-74)||(29891915-29891986)
chr4 (14-73)||(32130170-32130229)
chr4 (3-38)||(36123425-36123460)
chr4 (69-104)||(39440632-39440667)
chr4 (69-104)||(44539882-44539917)
chr4 (31-74)||(47181939-47181982)
chr4 (31-74)||(48402127-48402170)
chr4 (3-38)||(50890039-50890074)
chr4 (10-99)||(10779987-10780075)
chr4 (10-99)||(10973596-10973684)
chr4 (4-74)||(20760327-20760396)
chr4 (4-74)||(20766718-20766787)
chr4 (70-104)||(26492156-26492190)
chr4 (3-73)||(47288153-47288223)
chr4 (32-74)||(56363975-56364017)
chr4 (3-40)||(9393836-9393873)
chr4 (3-40)||(14113577-14113614)
chr4 (7-40)||(29227206-29227239)
chr4 (7-60)||(41262288-41262341)
chr4 (69-98)||(45083120-45083149)
chr4 (17-74)||(49449093-49449150)
chr4 (3-40)||(49896630-49896667)
chr4 (3-63)||(193603-193663)
chr4 (12-100)||(2109515-2109603)
chr4 (69-101)||(11068836-11068868)
chr4 (3-63)||(15522425-15522485)
chr4 (2-34)||(18882945-18882977)
chr4 (4-40)||(22813685-22813721)
chr4 (3-35)||(26908052-26908084)
chr4 (3-67)||(31995852-31995916)
chr4 (3-62)||(32696251-32696311)
chr4 (3-62)||(41849761-41849821)
chr4 (4-40)||(55266097-55266133)
[»] chr2 (81 HSPs)
chr2 (1-104)||(22416281-22416384)
chr2 (1-77)||(2076637-2076713)
chr2 (2-77)||(41195653-41195728)
chr2 (1-77)||(18254136-18254212)
chr2 (1-75)||(41042322-41042396)
chr2 (12-77)||(37737898-37737963)
chr2 (1-77)||(9647200-9647276)
chr2 (1-76)||(34945018-34945093)
chr2 (5-104)||(44287342-44287441)
chr2 (3-77)||(9207660-9207734)
chr2 (3-77)||(27490657-27490731)
chr2 (3-75)||(7663995-7664067)
chr2 (1-77)||(32477400-32477476)
chr2 (3-104)||(43487449-43487562)
chr2 (3-79)||(44977424-44977500)
chr2 (46-104)||(17388503-17388561)
chr2 (13-74)||(44654704-44654765)
chr2 (1-81)||(6511319-6511399)
chr2 (1-77)||(9194309-9194385)
chr2 (3-74)||(19642668-19642739)
chr2 (5-104)||(42821444-42821541)
chr2 (1-104)||(1248754-1248869)
chr2 (12-101)||(10060339-10060428)
chr2 (3-75)||(1907692-1907764)
chr2 (5-77)||(42091431-42091503)
chr2 (1-77)||(42421825-42421901)
chr2 (12-104)||(22888705-22888809)
chr2 (3-73)||(1352459-1352529)
chr2 (1-67)||(3838817-3838883)
chr2 (4-77)||(6049272-6049343)
chr2 (3-65)||(10216920-10216982)
chr2 (3-73)||(16973692-16973762)
chr2 (3-77)||(29349576-29349650)
chr2 (5-74)||(7258491-7258560)
chr2 (3-67)||(7698241-7698305)
chr2 (1-77)||(9760086-9760162)
chr2 (1-77)||(9990759-9990835)
chr2 (3-63)||(12070918-12070978)
chr2 (3-75)||(18846681-18846753)
chr2 (5-77)||(19633354-19633426)
chr2 (5-77)||(19830255-19830327)
chr2 (3-74)||(7502340-7502411)
chr2 (3-77)||(8848624-8848696)
chr2 (3-74)||(16011502-16011573)
chr2 (69-104)||(21611543-21611578)
chr2 (3-74)||(23690438-23690509)
chr2 (3-62)||(39147836-39147895)
chr2 (31-73)||(33273518-33273560)
chr2 (1-38)||(19109059-19109096)
chr2 (69-101)||(6049236-6049268)
chr2 (3-63)||(14328452-14328512)
chr2 (4-40)||(31578506-31578542)
chr2 (4-40)||(32944467-32944503)
chr2 (3-74)||(3771442-3771513)
chr2 (69-104)||(3838768-3838803)
chr2 (69-104)||(9760166-9760201)
chr2 (73-104)||(9990843-9990874)
chr2 (7-38)||(11965868-11965899)
chr2 (9-40)||(14871715-14871746)
chr2 (3-38)||(19843555-19843590)
chr2 (31-74)||(25270512-25270555)
chr2 (3-38)||(29449282-29449317)
chr2 (69-104)||(32477480-32477515)
chr2 (3-34)||(36774609-36774640)
chr2 (3-61)||(37037310-37037366)
chr2 (31-74)||(41056677-41056720)
chr2 (3-37)||(7084681-7084715)
chr2 (4-74)||(14255374-14255444)
chr2 (3-37)||(29361090-29361124)
chr2 (12-66)||(36587408-36587462)
chr2 (70-104)||(41042403-41042437)
chr2 (3-52)||(10521309-10521358)
chr2 (6-59)||(17569651-17569704)
chr2 (16-61)||(22445967-22446012)
chr2 (3-40)||(34134735-34134772)
chr2 (7-40)||(37316778-37316811)
chr2 (2-38)||(14233685-14233721)
chr2 (2-34)||(15269930-15269962)
chr2 (3-62)||(33583164-33583221)
chr2 (2-34)||(39449336-39449368)
chr2 (4-40)||(44239108-44239144)
[»] chr8 (66 HSPs)
chr8 (1-104)||(10731614-10731717)
chr8 (1-104)||(31249424-31249527)
chr8 (3-77)||(37133789-37133863)
chr8 (1-77)||(11253469-11253545)
chr8 (3-74)||(29025330-29025401)
chr8 (3-74)||(5740715-5740786)
chr8 (1-104)||(27325826-27325941)
chr8 (3-77)||(32501123-32501197)
chr8 (3-77)||(43397851-43397925)
chr8 (3-67)||(10902775-10902839)
chr8 (1-77)||(12898856-12898932)
chr8 (1-77)||(22719508-22719584)
chr8 (1-77)||(36660377-36660453)
chr8 (1-79)||(5277424-5277502)
chr8 (1-77)||(36816543-36816619)
chr8 (3-63)||(45405602-45405662)
chr8 (3-74)||(10839412-10839483)
chr8 (3-73)||(13106550-13106620)
chr8 (3-73)||(23754637-23754707)
chr8 (1-77)||(4054213-4054289)
chr8 (1-77)||(34186675-34186751)
chr8 (1-76)||(36251395-36251469)
chr8 (12-77)||(7271929-7271994)
chr8 (10-59)||(39856115-39856164)
chr8 (3-75)||(6440152-6440224)
chr8 (1-77)||(37449352-37449428)
chr8 (12-75)||(2883267-2883330)
chr8 (7-66)||(5600924-5600983)
chr8 (7-66)||(5639637-5639696)
chr8 (3-62)||(38958493-38958552)
chr8 (3-74)||(40517328-40517399)
chr8 (14-77)||(42768285-42768348)
chr8 (4-66)||(44061789-44061851)
chr8 (3-40)||(10592244-10592281)
chr8 (3-67)||(27854705-27854767)
chr8 (7-40)||(44090961-44090994)
chr8 (3-79)||(12734936-12735012)
chr8 (33-77)||(24479323-24479367)
chr8 (3-75)||(35067231-35067303)
chr8 (3-91)||(38578278-38578366)
chr8 (3-38)||(16613704-16613739)
chr8 (3-74)||(21526210-21526281)
chr8 (69-104)||(22719588-22719623)
chr8 (3-74)||(25830175-25830246)
chr8 (7-66)||(25987724-25987783)
chr8 (7-38)||(33451529-33451560)
chr8 (5-68)||(34639605-34639668)
chr8 (3-75)||(41639726-41639800)
chr8 (73-104)||(42768356-42768387)
chr8 (15-62)||(43632280-43632327)
chr8 (7-66)||(44825517-44825576)
chr8 (3-57)||(24798304-24798358)
chr8 (3-37)||(34718185-34718219)
chr8 (10-40)||(44064435-44064465)
chr8 (1-38)||(2730926-2730963)
chr8 (1-38)||(10692507-10692544)
chr8 (3-79)||(36885413-36885489)
chr8 (3-63)||(3413133-3413193)
chr8 (2-38)||(4658229-4658265)
chr8 (3-39)||(6445247-6445283)
chr8 (3-39)||(7777144-7777180)
chr8 (3-63)||(8671496-8671556)
chr8 (2-34)||(16872126-16872158)
chr8 (14-62)||(34694861-34694909)
chr8 (69-101)||(36816507-36816539)
chr8 (7-39)||(45405948-45405980)
[»] chr6 (52 HSPs)
chr6 (3-104)||(5080467-5080568)
chr6 (1-104)||(8098497-8098600)
chr6 (3-77)||(277061-277135)
chr6 (3-77)||(22079490-22079564)
chr6 (3-73)||(26595419-26595489)
chr6 (1-77)||(32316855-32316931)
chr6 (3-74)||(3853237-3853308)
chr6 (1-77)||(552861-552937)
chr6 (1-77)||(18737494-18737570)
chr6 (5-74)||(31883233-31883302)
chr6 (1-77)||(34047455-34047531)
chr6 (3-74)||(5694081-5694152)
chr6 (3-105)||(13689881-13689995)
chr6 (14-74)||(4820448-4820508)
chr6 (1-77)||(11612256-11612332)
chr6 (1-77)||(15974676-15974752)
chr6 (3-67)||(24900844-24900908)
chr6 (4-79)||(20998070-20998145)
chr6 (3-104)||(16328599-16328700)
chr6 (1-77)||(14818000-14818076)
chr6 (20-68)||(33603216-33603264)
chr6 (3-77)||(1156790-1156864)
chr6 (3-77)||(17551306-17551379)
chr6 (16-77)||(2241952-2242013)
chr6 (3-104)||(16337822-16337923)
chr6 (1-77)||(31077861-31077938)
chr6 (3-62)||(6271420-6271477)
chr6 (3-71)||(30457575-30457643)
chr6 (69-104)||(552941-552976)
chr6 (7-104)||(16364971-16365068)
chr6 (3-100)||(10335621-10335718)
chr6 (51-104)||(16352060-16352113)
chr6 (1-38)||(25811804-25811841)
chr6 (24-77)||(33430289-33430342)
chr6 (3-74)||(16199526-16199591)
chr6 (3-38)||(8747239-8747274)
chr6 (4-79)||(30956143-30956218)
chr6 (4-66)||(8645380-8645442)
chr6 (3-77)||(10826573-10826647)
chr6 (1-74)||(3772424-3772496)
chr6 (4-37)||(8505740-8505773)
chr6 (1-38)||(8990976-8991013)
chr6 (1-38)||(9015423-9015460)
chr6 (4-53)||(11072242-11072291)
chr6 (75-104)||(15974762-15974791)
chr6 (3-104)||(16367946-16368047)
chr6 (5-74)||(33195249-33195318)
chr6 (2-34)||(1369429-1369461)
chr6 (2-34)||(13143352-13143384)
chr6 (14-66)||(14910258-14910310)
chr6 (2-34)||(18141271-18141303)
chr6 (10-38)||(28748190-28748218)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-105)||(35589-35695)
[»] chr5 (69 HSPs)
chr5 (3-104)||(35646453-35646554)
chr5 (1-104)||(1079852-1079955)
chr5 (1-77)||(5168251-5168327)
chr5 (1-77)||(33037588-33037664)
chr5 (2-104)||(1274427-1274540)
chr5 (3-77)||(7287116-7287190)
chr5 (1-77)||(26791171-26791247)
chr5 (3-75)||(33958188-33958260)
chr5 (1-77)||(36739016-36739092)
chr5 (1-77)||(41321323-41321399)
chr5 (6-77)||(39591753-39591824)
chr5 (6-77)||(39592145-39592216)
chr5 (3-77)||(2972394-2972468)
chr5 (3-77)||(14051242-14051316)
chr5 (1-77)||(28306059-28306135)
chr5 (1-104)||(1671610-1671725)
chr5 (3-77)||(7076495-7076569)
chr5 (3-77)||(39054657-39054731)
chr5 (1-76)||(14923141-14923216)
chr5 (5-67)||(27487959-27488021)
chr5 (3-73)||(35567571-35567641)
chr5 (1-77)||(1764292-1764368)
chr5 (1-77)||(15479537-15479613)
chr5 (1-73)||(18660827-18660899)
chr5 (1-57)||(19521950-19522006)
chr5 (3-75)||(21943625-21943696)
chr5 (1-77)||(28467380-28467456)
chr5 (3-77)||(7552894-7552966)
chr5 (3-74)||(13309953-13310024)
chr5 (1-104)||(35634723-35634839)
chr5 (3-77)||(13168592-13168666)
chr5 (5-74)||(22972189-22972258)
chr5 (1-73)||(8686959-8687031)
chr5 (1-77)||(18258720-18258796)
chr5 (69-105)||(33037668-33037704)
chr5 (3-75)||(33599033-33599104)
chr5 (10-65)||(8097329-8097384)
chr5 (69-104)||(18258681-18258716)
chr5 (3-69)||(4719721-4719787)
chr5 (3-73)||(21156058-21156128)
chr5 (4-57)||(34546487-34546540)
chr5 (14-62)||(6596412-6596460)
chr5 (3-74)||(17626062-17626127)
chr5 (3-74)||(19844240-19844309)
chr5 (3-62)||(20770201-20770261)
chr5 (3-59)||(36562997-36563053)
chr5 (3-63)||(41699524-41699584)
chr5 (7-38)||(12739847-12739878)
chr5 (7-38)||(12802670-12802701)
chr5 (7-66)||(13089719-13089778)
chr5 (69-104)||(14923221-14923256)
chr5 (7-66)||(17097739-17097798)
chr5 (3-74)||(19952070-19952141)
chr5 (3-74)||(22098326-22098397)
chr5 (3-38)||(29463066-29463101)
chr5 (73-104)||(36739100-36739131)
chr5 (4-66)||(611936-611998)
chr5 (69-103)||(1764372-1764406)
chr5 (70-104)||(41321404-41321438)
chr5 (7-40)||(16972063-16972096)
chr5 (1-38)||(31748405-31748442)
chr5 (7-36)||(39195792-39195821)
chr5 (3-40)||(42643174-42643211)
chr5 (46-74)||(3565197-3565225)
chr5 (2-34)||(8675403-8675435)
chr5 (2-34)||(10649504-10649536)
chr5 (14-62)||(20270650-20270698)
chr5 (3-39)||(25871411-25871447)
chr5 (7-43)||(40364643-40364679)
[»] chr1 (97 HSPs)
chr1 (1-101)||(12657290-12657391)
chr1 (1-104)||(29359707-29359808)
chr1 (1-77)||(649837-649913)
chr1 (1-77)||(3981953-3982029)
chr1 (1-77)||(35369768-35369844)
chr1 (14-104)||(6693238-6693328)
chr1 (3-77)||(52576229-52576303)
chr1 (3-104)||(41677224-41677325)
chr1 (1-77)||(31088249-31088325)
chr1 (1-77)||(33100876-33100952)
chr1 (1-77)||(44519078-44519154)
chr1 (1-77)||(50726175-50726251)
chr1 (1-104)||(3159444-3159547)
chr1 (2-77)||(19055686-19055761)
chr1 (3-74)||(27533414-27533485)
chr1 (3-73)||(9988022-9988092)
chr1 (1-75)||(43775274-43775348)
chr1 (3-104)||(14983843-14983944)
chr1 (2-104)||(48470708-48470822)
chr1 (1-77)||(23645479-23645555)
chr1 (1-77)||(26469427-26469503)
chr1 (1-77)||(27464984-27465060)
chr1 (1-73)||(37619612-37619684)
chr1 (3-71)||(49065297-49065365)
chr1 (3-74)||(51571276-51571347)
chr1 (3-77)||(18434865-18434939)
chr1 (3-72)||(45640372-45640440)
chr1 (12-73)||(50932383-50932444)
chr1 (1-73)||(15082981-15083053)
chr1 (1-77)||(37274960-37275036)
chr1 (3-74)||(8828051-8828122)
chr1 (3-74)||(9566890-9566961)
chr1 (6-77)||(30467460-30467531)
chr1 (6-77)||(45333784-45333855)
chr1 (3-73)||(50149016-50149086)
chr1 (3-77)||(50775083-50775157)
chr1 (1-74)||(44914502-44914575)
chr1 (4-77)||(2571705-2571780)
chr1 (3-74)||(18512273-18512344)
chr1 (3-74)||(26021006-26021077)
chr1 (14-73)||(31827032-31827091)
chr1 (4-66)||(48858895-48858957)
chr1 (1-77)||(37685399-37685473)
chr1 (1-77)||(37700045-37700119)
chr1 (12-77)||(45121408-45121472)
chr1 (1-73)||(37985317-37985389)
chr1 (3-63)||(48261210-48261270)
chr1 (69-104)||(8350087-8350122)
chr1 (3-74)||(10627740-10627811)
chr1 (69-104)||(26469507-26469542)
chr1 (69-104)||(31088329-31088364)
chr1 (3-74)||(33076190-33076261)
chr1 (70-105)||(44914458-44914493)
chr1 (69-104)||(45121369-45121404)
chr1 (7-66)||(48983605-48983664)
chr1 (1-75)||(3851226-3851300)
chr1 (3-73)||(4466765-4466835)
chr1 (1-66)||(4776824-4776889)
chr1 (26-104)||(21401491-21401581)
chr1 (5-74)||(29877370-29877439)
chr1 (3-60)||(41070893-41070950)
chr1 (3-63)||(8846044-8846104)
chr1 (3-62)||(18336216-18336276)
chr1 (14-74)||(19947674-19947734)
chr1 (3-75)||(23665654-23665726)
chr1 (3-75)||(34817973-34818045)
chr1 (2-38)||(35136913-35136949)
chr1 (6-66)||(47642544-47642604)
chr1 (3-39)||(51080055-51080091)
chr1 (1-77)||(51718553-51718629)
chr1 (69-104)||(649917-649952)
chr1 (69-104)||(3981914-3981949)
chr1 (14-73)||(30570605-30570664)
chr1 (3-98)||(33070673-33070768)
chr1 (69-104)||(33100956-33100991)
chr1 (69-100)||(35369848-35369879)
chr1 (69-104)||(37619692-37619727)
chr1 (3-62)||(39849095-39849154)
chr1 (69-104)||(44519039-44519074)
chr1 (69-104)||(45640449-45640484)
chr1 (3-38)||(49570067-49570102)
chr1 (25-68)||(51436615-51436658)
chr1 (3-98)||(740859-740956)
chr1 (3-73)||(2269503-2269573)
chr1 (4-74)||(30745058-30745128)
chr1 (4-74)||(30766509-30766579)
chr1 (69-98)||(3851306-3851335)
chr1 (3-60)||(25509123-25509180)
chr1 (3-68)||(25672412-25672477)
chr1 (3-40)||(47721479-47721516)
chr1 (3-40)||(47728471-47728508)
chr1 (4-53)||(49647101-49647150)
chr1 (69-98)||(50932452-50932481)
chr1 (4-75)||(6340796-6340868)
chr1 (2-34)||(10890016-10890048)
chr1 (3-79)||(11597707-11597783)
chr1 (30-82)||(51137573-51137625)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-100)||(10867-10966)
[»] scaffold0519 (1 HSPs)
scaffold0519 (1-77)||(11850-11926)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-77)||(76546-76622)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-75)||(8736-8810)
[»] scaffold0098 (2 HSPs)
scaffold0098 (1-77)||(49363-49439)
scaffold0098 (69-104)||(49443-49478)
[»] scaffold0087 (2 HSPs)
scaffold0087 (3-74)||(53291-53362)
scaffold0087 (3-74)||(24468-24539)
[»] scaffold0343 (1 HSPs)
scaffold0343 (4-74)||(8911-8980)
[»] scaffold0276 (1 HSPs)
scaffold0276 (4-66)||(1716-1778)
[»] scaffold0618 (1 HSPs)
scaffold0618 (7-40)||(8916-8949)
[»] scaffold0013 (1 HSPs)
scaffold0013 (4-99)||(94786-94881)
[»] scaffold0432 (1 HSPs)
scaffold0432 (7-40)||(6483-6516)
[»] scaffold0201 (1 HSPs)
scaffold0201 (7-40)||(8547-8580)
[»] scaffold0148 (1 HSPs)
scaffold0148 (3-35)||(20870-20902)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 99 - 292
Target Start/End: Original strand, 30941505 - 30941699
Alignment:
Q  99 caactccaatgtttatgcaagtctggcggaattataagtgtttggtgttattggtttgtgataggttttgacattgggttcagtcttcttgtgaaaggac 198  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30941505 caactccaatgtttttgctagtctggcggaattataggtgtttggtgttattggtttgtgataggttttgacattgggttcagtcttcctgtgaaaggac 30941604  T
Q  199 attttacaaatagtgactc-ttatgtcatgagtgatcactaattcatggtattaatccaattgcagtgctattggtgttccaaattttccccttt 292  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30941605 attttacaaatagtgactctttatgtcatgagtgatcactacttcgtggtattaatccaattgcagtgctattggtgttccaaattttccccttt 30941699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 107 - 289
Target Start/End: Complemental strand, 42850410 - 42850226
Alignment:
Q  107 atgtttatgcaagtctggcggaattataagtgtttggtgttattggtttgtgataggtttt---gacattgggttcagtcttcttgtgaaaggacatttt 203  Q
    |||||| ||| ||||| | ||||||||| ||||||||||||||| ||||||||||||||||   |||| |||||||||||||||||||||||| | | ||    
T  42850410 atgtttgtgctagtcttgtggaattatatgtgtttggtgttatttgtttgtgataggtttttttgacaatgggttcagtcttcttgtgaaagggcttatt 42850311  T
Q  204 acaaatagtgactcttatgtcatgagtgatcactaattcatggtattaatccaattgcagtgctattggtgttccaaattttcccc 289  Q
    | ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||    
T  42850310 ataaatagtgattcttatgtcatgtgtgatcactaattcatggtagtaatccaattgaagtgctattagtgttcc-aattttcccc 42850226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 38073299 - 38073393
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactcca 106  Q
    |||||||||||||||||| |||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38073299 tctctctctattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactcca 38073393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 38861164 - 38861267
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||||||||||||||||||| |||| |||||||| |  || || |||| ||||||||||||||| ||||||||| |||| || |||||||||||||    
T  38861164 tctttttactttctctctctattgttttggtttttgtgccactaccttatttactttgtaaaattttgattgtcacatgtatgaatattcaaataacaca 38861263  T
Q  101 actc 104  Q
    ||||    
T  38861264 actc 38861267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 31445388 - 31445458
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||    
T  31445388 tttttactttctctctctattgctttgatttttgtgtcaatcactcattttctttgtaaaattttgattgt 31445458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 35072363 - 35072293
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  35072363 tttttactttctctttctattgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgt 35072293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38956621 - 38956545
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  38956621 tctttttactttctctctctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 38956545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44895575 - 44895499
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  44895575 tctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 44895499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 35098704 - 35098634
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||| | |||||||||||||||    
T  35098704 tttttactttctctttctattgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgt 35098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41189546 - 41189472
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||||||||||  |||||||||| ||| ||||||| ||||||||||||||| ||||||    
T  41189546 tctttttactttctctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgtca 41189472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 40417844 - 40417915
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||| |||||||||||||| ||||| |||| ||| |||| ||||||||||||||||||||||||    
T  40417844 tttttactttctttctctattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtc 40417915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 48062127 - 48062198
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||||| |||| |||||||||| ||| |||||||||||| |||||||||| |||||    
T  48062127 tttttactttctctctctattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtc 48062198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22918172 - 22918099
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||| |||||    
T  22918172 tctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgtc 22918099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43025408 - 43025480
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||| |||||||||||||||| |||||||| |  |||||||||| |||||||||||||| |||||    
T  43025408 tctttttactttttctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgt 43025480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40112957 - 40112883
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||||||||||| |||||||| |  || || |||| ||||||||||||||| ||||||    
T  40112957 tctttttactttctctctctattgctttggtttttgtgccactaccttatttcctttgtaaaattttgattgtca 40112883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 43942705 - 43942815
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttg------------tcacatatatggatgt 88  Q
    ||||||||||||||||||||||||||||| |||||||      | |||||||||||||||||||||||||||            ||||||||||||||||    
T  43942705 tctttttactttctctctctattgctttggtttttgt-----cacctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgt 43942799  T
Q  89 tcaaataacacaactc 104  Q
    ||||||||||||||||    
T  43942800 tcaaataacacaactc 43942815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 4292498 - 4292558
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||||||||||||||||||||||||||||  | |||| | |||||||||||||||    
T  4292498 tttttactttctctctctattgctttgatttttgtaccaatatttaattttctttgtaaaa 4292558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 35207582 - 35207642
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||| |||||||| |||  ||||||| ||||||||||||||||||||    
T  35207582 tctctctattgctttgatatttgtgtcaatacttcattttatttgtaaaattttggttgtc 35207642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 35822975 - 35822903
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||||||||||||||||||||||||||| | |||  |  |||||||||||||| | |||||||||    
T  35822975 tttttactttctctctctattgctttgatttttgtgccaatacatatttttctttgtaaaaatatggttgtca 35822903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 36352585 - 36352525
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||| ||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  36352585 tttttactttatctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaa 36352525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44189313 - 44189237
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||| ||||| ||||||||||  || ||||||| ||||| ||| ||||| ||||||||    
T  44189313 tctttttactttctctctctattactttggtttttgtgtcactaactcatttcctttgaaaatttttgattgtcaca 44189237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 12007182 - 12007123
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||||||||||||||||||||||| |  ||||| | ||||||||||||||||    
T  12007182 tactttctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaattt 12007123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 22925274 - 22925215
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||| ||||||||| ||||||||||| |||||| |||||| ||||||||||||||||||    
T  22925274 tctctatattgctttaatttttgtgtcaatatcttattttccttgtaaaattttggttgt 22925215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 25192907 - 25192844
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||| |||| ||||||||||  || |||||||||||||||||||||| |||||||||    
T  25192907 tctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcaca 25192844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 40854655 - 40854560
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataaca 98  Q
    |||||||||||||||||||||||||||||||||||| | | |  |  |||||||||||||| | |||||||||   | || |||||||||||||||    
T  40854655 tttttactttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaaccaaattgatgttcaaataaca 40854560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 46578135 - 46578064
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||| ||||||||||||| | ||| ||| |||  ||| |||||||||||||||||    
T  46578135 ttttactttctctctctattgatttgatttttgtgccaatacctcgtttcttttataaaattttggttgtca 46578064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 10700184 - 10700116
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||||||||||||||||||| | | ||  |||||||| ||||||| ||||||||    
T  10700184 tttactttctctctctattgctttgatttttgtgtcaaga-ctttttttctttataaaattatggttgtc 10700116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 24614316 - 24614243
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||| |||||| ||||||||||||| ||||||||||  || ||||||| ||||||||||||||| || |||||    
T  24614316 ttttattttctcactctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcaca 24614243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 41989743 - 41989667
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctca--ttttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| |||||||||| |||||||| |  || ||||  |||| |||||||||||||||||||||||    
T  41989743 tttttactttctctctttattgctttggtttttgtgccactacctcattttttttttgtaaaattttggttgtcaca 41989667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 48145595 - 48145696
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    ||||||||||||||||||||| ||||||| |||||| | |||  |  |||||||||||||| | |||||||||   | || |||||||||||||||| ||    
T  48145595 tttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatatggttgtcaagcaaattgatgttcaaataacactac 48145694  T
Q  103 tc 104  Q
    ||    
T  48145695 tc 48145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 41018734 - 41018806
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||| ||||| |||||||||  ||| ||| ||||||||||||| || || ||||||    
T  41018734 tttttactttctctctctattactttggtttttgtgttaatacctctttttctttgtaaatttatgattgtca 41018806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 41430152 - 41430092
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||| |||||||||||||||| |||| ||||| |||| | |||||||||||||||    
T  41430152 tttttactttatctctctattgctttggttttcgtgtcaatatatgattttctttgtaaaa 41430092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 43159575 - 43159504
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||||||||||||||||||  |||||| || ||| ||| ||||||||||||| || |||||||||    
T  43159575 tttttactttctctctctattgctttg-gttttgtatcaatacctctttttctttgtaaatttatggttgtca 43159504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 3937111 - 3937050
Alignment:
Q  16 tctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| ||||| |||||||| | ||| ||||||| |||| |||||||||||||||||||    
T  3937111 tctctattactttggtttttgtgccaatacctcatttcctttataaaattttggttgtcaca 3937050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 24532943 - 24532906
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  24532943 tttttactttctctctctattgctttggtttttgtgtc 24532906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 30064520 - 30064573
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    |||||||||||||||||||||  |||| |||  |||||||||||||||||||||    
T  30064520 tctctctattgctttgattttcatgtcaatacatcattttctttgtaaaatttt 30064573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 34507206 - 34507169
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||||||||||||||||||||||||| |||||    
T  34507206 tttttactttctctctctattgctttgattttcgtgtc 34507169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 45851204 - 45851136
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||| |||||||||||||| ||||||||||   |  |||||| |||||||||||||| |||||||    
T  45851204 ttttactttctttctctattgctttggtttttgtgtc---acttcatttcctttgtaaaattttagttgtca 45851136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 33057454 - 33057486
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgt 39  Q
    |||||||||||||||||||||||||||||||||    
T  33057454 tactttctctctctattgctttgatttttgtgt 33057486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 41863619 - 41863559
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||| |||||||||| |||||||| | ||| |||||||| |||||||||||||| |||||    
T  41863619 tctctttattgctttgttttttgtgccaatacctcattttatttgtaaaattttgattgtc 41863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 42584873 - 42584933
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||| ||||||||||||||||||| | ||||| |||  | |||||||||||||||    
T  42584873 tttttactttatctctctattgctttgattctcgtgtcaatagatgattttctttgtaaaa 42584933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 3683602 - 3683665
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||| ||||||||||||||| ||| ||||||||||| ||| || ||||||||| || |||||    
T  3683602 tttttattttctctctctattgttttaatttttgtgtcaataacttattttctttatagaattt 3683665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 3937046 - 3937011
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||| |||||||||||||||||||||||||    
T  3937046 gttgtcacatgtatggatgttcaaataacacaactc 3937011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 17002407 - 17002470
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||| |||||| |||||| ||||| |||||||||| ||  |||||||||||| ||||||||    
T  17002407 tttttaccttctctttctattactttggtttttgtgtcaatcactcattttctttataaaattt 17002470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 46022240 - 46022197
Alignment:
Q  31 tttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  46022240 tttttgtgtcaatacctcattttctttataaaattttggttgtc 46022197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 47391326 - 47391255
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||| |||| ||||| ||||| ||||||||||||||| |||| |||||| |||| |||||| ||| |||||    
T  47391326 tttttcctttttctctttattgttttgatttttgtgtcaatatttcatttcctttataaaatattgattgtc 47391255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 29723916 - 29723862
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||||||||||||||||||  |  ||||| | ||||||||||||||||    
T  29723916 tctctctctattgctttgatttttgtaccactatctaaatttctttgtaaaattt 29723862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 34978368 - 34978402
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||||||||||||| ||||||||    
T  34978368 ttttactttctctctctattgctttgttttttgtg 34978402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 45420060 - 45420026
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  45420060 ttttactttctctctctattgttttgatttttgtg 45420026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 1471292 - 1471219
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaaattttggttgtca 75  Q
    |||||||||| ||||||||||||||||||||| ||| | | |||| | | ||||||||||| || |||||||||    
T  1471292 tttttactttatctctctattgctttgattttcgtgccaaaatctacttcttctttgtaaatttatggttgtca 1471219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 19643431 - 19643398
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    |||||| |||||||||||||||||||||||||||    
T  19643431 tactttatctctctattgctttgatttttgtgtc 19643398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 27568088 - 27568125
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  27568088 tttttactttctctctctattgttttggtttttgtgtc 27568125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 30941469 - 30941506
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctca 49  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  30941469 tctctctctattgctttgatttttgtgtcaatacctca 30941506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 32529778 - 32529745
Alignment:
Q  70 ttgtcacatatatggatgttcaaataacacaact 103  Q
    |||||||||||||||||| |||||||||||||||    
T  32529778 ttgtcacatatatggatgctcaaataacacaact 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32529857 - 32529783
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| |  ||||||||| ||||| | ||  || ||||||| ||||||||||||||| ||||||||    
T  32529857 tctttttactttctcttt--attgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtcaca 32529783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 40
Target Start/End: Complemental strand, 32952443 - 32952414
Alignment:
Q  11 ttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||||||||    
T  32952443 ttctctctctattgctttgatttttgtgtc 32952414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 38939980 - 38939943
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  38939980 tttttactttatctctctattgctttgattttcgtgtc 38939943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 39497302 - 39497245
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgta 60  Q
    |||||||||||||||| |||||||||| |||||||  |  ||| ||||||||||||||    
T  39497302 tttttactttctctctttattgctttggtttttgtaccattatttcattttctttgta 39497245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 40112871 - 40112842
Alignment:
Q  75 acatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||    
T  40112871 acatatatggatgttcaaataacacaactc 40112842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 36207117 - 36207177
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||| |||| ||||| || | |||||| |||||||||||||| |||| ||||||    
T  36207117 tctctctattgttttggtttttctgccaatatcttattttctttgtaaattttttgttgtc 36207177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 36533798 - 36533834
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgt 39  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  36533798 tttttactttctctctctattactttgattttcgtgt 36533834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 44649327 - 44649258
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||  |||| || ||||| |||||||||| |||| | ||||||||| ||||||||| ||||||    
T  44649327 tttttactttct--ctcttttactttggtttttgtgtcaatatttaattttctttataaaattttagttgtc 44649258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 49128981 - 49128945
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgt 39  Q
    |||||||||||||||| || |||||||||||||||||    
T  49128981 tttttactttctctctttactgctttgatttttgtgt 49128945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 6e-40; HSPs: 108)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41505559 - 41505662
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||||||||||||||||||| ||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41505559 tctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 41505658  T
Q  101 actc 104  Q
    ||||    
T  41505659 actc 41505662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 33791771 - 33791670
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    ||||||||||| |||||||||| ||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  33791771 tttttactttccctctctattgttttgacttttgtgtcaatacctcattttctttgtgaaattttggttgtcatataaatggatgttcaaataacacaac 33791672  T
Q  103 tc 104  Q
    ||    
T  33791671 tc 33791670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41309185 - 41309261
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||    
T  41309185 tctttttactttctctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcaca 41309261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5114146 - 5114220
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||    
T  5114146 tctttttactttctctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtca 5114220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20547993 - 20547917
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||||||||||||||||| |  || ||||||| ||||||||||||||||||||||||    
T  20547993 tctttttactttctctctctattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 20547917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 44413912 - 44413845
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatata 81  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  44413912 tctctctattgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgtcacatata 44413845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 35377082 - 35377008
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| ||||||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||    
T  35377082 tttttactttctttctctattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcaca 35377008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 37503748 - 37503674
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  37503748 tttttactttctttttctattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgtcaca 37503674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27541505 - 27541429
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  27541505 tctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 27541429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32205663 - 32205763
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||| |||||||||||||||||||| ||||||  ||  ||  ||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||    
T  32205663 tctttttattttctctctctattgctttggtttttgcatcactacttcattttctttataaaattttagttgttacatctatggatgttcaaataacaca 32205762  T
Q  101 a 101  Q
    |    
T  32205763 a 32205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42358641 - 42358565
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| ||||||||    
T  42358641 tctttttactttatctctctattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgtcaca 42358565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 45000131 - 45000228
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||||||||||||||||||| |||| |||||||| |  || ||||||| |||||||||||||||||      ||||||||||||||||||||||||    
T  45000131 tctttttactttctctctctattgatttggtttttgtgccactacctcatttcctttgtaaaattttggt------atatatggatgttcaaataacaca 45000224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 52254141 - 52254065
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||||||||  || ||||||| |||||||||||||| |||||||||    
T  52254141 tctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 52254065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 13348135 - 13348064
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||| ||||||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||||||    
T  13348135 tttttaccttctctctctattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtc 13348064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38926696 - 38926771
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcac 76  Q
    ||||||||||||||||||||||||||||| ||||||||||  || || |||| |||||||||||||||||||||||    
T  38926696 tctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtcac 38926771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 52939719 - 52939794
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcac 76  Q
    ||||||||||||||||||||||||||||| |||||||| |  || ||||||| |||||||||||||||||||||||    
T  52939719 tctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcac 52939794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5244299 - 5244373
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  5244299 tttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 5244373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 44856022 - 44856136
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttg------------tcacatatatggatgtt 89  Q
    |||||||||||||||||||||| |||||||||||||| |  || ||||||| |||||||||||||||||||            |||||||||||||||||    
T  44856022 ctttttactttctctctctatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgtt 44856121  T
Q  90 caaataacacaactc 104  Q
    |||||||||||||||    
T  44856122 caaataacacaactc 44856136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 288796 - 288909
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg------------gttgtcacatatatggatgttc 90  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||||  ||||||||||||||            |||||||||||||||||| |||    
T  288796 tttttactttctctctctattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttc 288895  T
Q  91 aaataacacaactc 104  Q
    ||||||||||||||    
T  288896 aaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26014880 - 26014956
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| |||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  26014880 tctttttactttctctctctattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgtcaca 26014956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45711442 - 45711370
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||||||||||||| |||| || ||||||| |||  |||||||||||||||||||||||||||    
T  45711442 tctttttactttctctctctattgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgt 45711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 46623975 - 46624051
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| ||||||| |||| ||||||||||  || ||||||||||||||||||||||| ||||||||    
T  46623975 tctttttactttctctttctattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcaca 46624051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 35597232 - 35597306
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||| |||| ||||||||||  || ||| ||| ||||||||||||||||||||||||    
T  35597232 tttttactttctctctctattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcaca 35597306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 50318350 - 50318292
Alignment:
Q  43 tatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaa 101  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  50318350 tatctcatttcctttgtaaaattttggttgtcacatgtatggatgttcaagtaacacaa 50318292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 42357076 - 42357011
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| ||||||||||  || ||||||| ||||||||||||||||||||||||    
T  42357076 tctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 42357011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36671017 - 36670941
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||||||||||||||| |||||||| |  || |||||||  |||||||||||||||||||||||    
T  36671017 tctttttactttttctctctattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgtcaca 36670941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 55361234 - 55361158
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacata 79  Q
    ||||||||||||||||||||||||||| |||||||||| |||  ||||||||||||||||    |||||||||||||    
T  55361234 tttttactttctctctctattgctttggtttttgtgtcaatacttcattttctttgtaaatcaatggttgtcacata 55361158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 37057058 - 37056987
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| ||||||||||| |||  |||||||||| ||| ||||||||||||||||||| |||||||||    
T  37057058 tttttactttatctctctattgtttttgtttttgtgtcaatacctcattttctttgtaaaatattggttgtc 37056987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 51982169 - 51982240
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||||||||  |||||||||| ||| || ||||||||| ||||||||| ||||||    
T  51982169 tttttactttctctctctattgctttagtttttgtgtcaataccttattttctttataaaattttagttgtc 51982240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 28539741 - 28539667
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||||||| ||||||| | | |  |||||||||||| |||||||||||| |||||    
T  28539741 tttttactttctctctctattgctttgacttttgtgccaaaacatcattttctttgcaaaattttggttatcaca 28539667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16969569 - 16969493
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| ||||||| |||||||||| || |  || ||||||| |||||||||||||| |||||||||    
T  16969569 tctttttactttctctttctattgttttgatttttatgccactacctcatttcctttgtaaaattttagttgtcaca 16969493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19149058 - 19149134
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| ||||| |||| |||||||| |  || ||||||| ||||||||||||||| ||||||||    
T  19149058 tctttttactttctctctttattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcaca 19149134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 42889055 - 42889123
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggtt 71  Q
    |||||||||  ||||||| |||||||| |||||||| | ||| ||||||||||||||||||||||||||    
T  42889055 tttttacttattctctctgttgctttggtttttgtgccaataactcattttctttgtaaaattttggtt 42889123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44413398 - 44413322
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| |||||||| | |||||||| | ||| ||||||| ||||||||||||||  ||||||||    
T  44413398 tctttttactttctctctttattgcttcggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcaca 44413322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47472397 - 47472473
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||| ||| |||  |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  47472397 tctttttactttctctctctgttgttttagtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 47472473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 55322717 - 55322621
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacac 99  Q
    |||||||||||||||||||||  |||| |||  |||||||||  |  ||||||||||||| || ||||||||||| | |||| ||||||||||||||    
T  55322717 tttttactttctctctctatttttttggtttccgtgtcgatacatatttttctttgtaaatttatggttgtcacacaaatggttgttcaaataacac 55322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 24256769 - 24256698
Alignment:
Q  6 ttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||| ||||| |||||||||||| || ||| ||||||| ||||||||||||||  ||||||||    
T  24256769 ttactttctctctttattgttttgatttttgtatcaatacctcatttcctttgtaaaattttaattgtcaca 24256698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 34627882 - 34627811
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||| || ||||||||||||||| |  |||||| |||||||||||||| || ||||||||    
T  34627882 tttttactttctctctttactgctttgatttttgtataaatatcttattttctttgtaaatttatggttgtc 34627811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 37302615 - 37302690
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||| ||||| |||||||| |  || ||||||| ||||| ||||||||| ||||||||    
T  37302615 ctttttactttctctctctattactttggtttttgtgccactacctcatttcctttgcaaaattttgattgtcaca 37302690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 52714804 - 52714899
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataaca 98  Q
    |||||||||||||||||||||||||||||||||||| | | |  |  |||||||||||||| | |||||||||   | || |||||||||||||||    
T  52714804 tttttactttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaaccaaattgatgttcaaataaca 52714899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 55151717 - 55151654
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    |||||||||||||||||| ||||||| |||||||||| |||  |||||| ||||||||||||||    
T  55151717 ttttactttctctctctagtgctttggtttttgtgtcaatacttcatttcctttgtaaaatttt 55151654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 6178426 - 6178372
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttcttt 57  Q
    |||||||||||||||||||||||||||||||||||||| ||| | | ||||||||    
T  6178426 tttttactttctctctctattgctttgatttttgtgtcaataccactttttcttt 6178372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 50876363 - 50876301
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatt 65  Q
    |||||| ||||||| |||||||||||||||||||| || ||| ||| ||||||||||||||||    
T  50876363 tttttattttctctttctattgctttgatttttgtatcaatacctctttttctttgtaaaatt 50876301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 52326087 - 52326202
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg------------gttgtcacatatatggatgt 88  Q
    |||||||||||||||||||||||| |||| ||||||||    || ||||||| |||||||||||||||            ||||||| ||||||||||||    
T  52326087 tctttttactttctctctctattgttttggtttttgtgcacttacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgt 52326186  T
Q  89 tcaaataacacaactc 104  Q
    ||||||||||||||||    
T  52326187 tcaaataacacaactc 52326202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 32924265 - 32924208
Alignment:
Q  20 tattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| ||||||||||  || ||||||| ||||||||||||||||||||||||    
T  32924265 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 32924208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34456859 - 34456924
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||||||||||||||||||| ||||||||| | ||| || | |||||||||| |||||    
T  34456859 tctttttactttctctctctattgctttaatttttgtgccaatacctaaatttctttgtataattt 34456924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 44463427 - 44463492
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg 68  Q
    |||||| ||||||| ||| || ||||||||||||| || ||||| |||||||||||||||||||||    
T  44463427 tttttattttctctttctgttactttgatttttgtatcaatatcacattttctttgtaaaattttg 44463492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7668190 - 7668115
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||| || |  ||||| | |||| ||| ||||||||||||||||||    
T  7668190 tctttttactttctctctctattgctttggtttttatgccactatctta-tttccttgcaaaattttggttgtcaca 7668115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 9692797 - 9692833
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||||||||||||||||||||||||||||||    
T  9692797 ttttactttctctctctattgctttgatttttgtgtc 9692833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 12762690 - 12762614
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacata 79  Q
    |||||| ||||||||| |||| |||||||||||||||| ||| ||  ||||||||||||| || |||||||| ||||    
T  12762690 tttttattttctctctttattactttgatttttgtgtcaataactatttttctttgtaaatttatggttgtcccata 12762614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 32924204 - 32924168
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactcc 105  Q
    |||||||||||||||||||||||||||||||||||||    
T  32924204 gttgtcacatatatggatgttcaaataacacaactcc 32924168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 35299864 - 35299816
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  35299864 tctctctattgctttgatttttgtgtcaatacctcattttctttataaa 35299816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 36756051 - 36755979
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||| ||||||||||||||||||||||||||||| | | || |  |||||||||||||| | |||||||||    
T  36756051 tttttattttctctctctattgctttgatttttgtgccaacatatacttttctttgtaaaaatatggttgtca 36755979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 39629839 - 39629771
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggtt 71  Q
    |||||||||||||||||||||| |||||||||| |||| |||  |  |||||||| |||||||||||||    
T  39629839 tttttactttctctctctattgttttgatttttatgtcaataatttcttttctttataaaattttggtt 39629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 13735878 - 13735913
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  13735878 gttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 14226694 - 14226635
Alignment:
Q  15 ctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| ||| |||| |||||||||| |||| |||||||||||||||||||||| |||||    
T  14226694 ctctctgttgttttggtttttgtgtcaatatttcattttctttgtaaaattttgattgtc 14226635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 32145982 - 32145923
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||||||||| |||||||||||||||  || || | ||||||||||||||||    
T  32145982 tactttctctctctattgttttgatttttgtgtcactacctaaatttctttgtaaaattt 32145923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33939304 - 33939382
Alignment:
Q  1 tctttttactttctc--tctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||  |||||||||||||| ||||||||||  ||  |||||| ||||| | ||||||||||||||||    
T  33939304 tctttttactttctctctctctattgctttggtttttgtgtcactacttcatttcctttgaataattttggttgtcaca 33939382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 33939386 - 33939421
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  33939386 gttgtcacatatatggatgttcaaataacacaactc 33939421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 52939799 - 52939834
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  52939799 gttgtcacatatatggatgttcaaataacacaactc 52939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 4494236 - 4494174
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||||| |||||||||||||||||||||||  || || | |||||||||| |||||    
T  4494236 ttttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataattt 4494174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 7934123 - 7934157
Alignment:
Q  70 ttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||||||||||||||||||||||||    
T  7934123 ttgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 8847180 - 8847254
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| ||| ||||||| |||| |||||||| | ||| |||||||| |||||||||||||| || |||||    
T  8847180 tttttactttttctttctattgttttggtttttgtgccaatacctcattttatttgtaaaattttgattatcaca 8847254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 19149139 - 19149173
Alignment:
Q  70 ttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||||||||||||||||||||||||    
T  19149139 ttgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 48346897 - 48346939
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatat 45  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  48346897 tttttactttctctctctattgctttggtttttgtgtcaatat 48346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 48353067 - 48353101
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgt 37  Q
    |||||||||||||||||||||||||||||||||||    
T  48353067 tttttactttctctctctattgctttgatttttgt 48353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 50314695 - 50314741
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctca 49  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  50314695 tttttactttctctctctattactttgatttttgtgtcaatacctca 50314741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7934043 - 7934118
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||| ||||||||||| | |||||||||| ||||| ||||  |||||||| | |||||||||||||| |||||||||    
T  7934043 tcttcttactttctctttttattgctttggttttt-tgtcactatctcatatcctttgtaaaattttagttgtcaca 7934118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 19150319 - 19150283
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  19150319 ttttactttctctctctattgttttgatttttgtgtc 19150283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 23592534 - 23592599
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| |||||||||||||||      |||||||||| ||| |||||||||||| ||||||||||||||||    
T  23592534 tttttattttctctctctattg------tttttgtgtcaatacctcattttctttataaaattttggttgtc 23592599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 26452723 - 26452663
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||||||||||||||||||||||||   |||| |||  | |||||||||||||||    
T  26452723 tttttactttctctctctattgctttgatttccctgtcaatacatgattttctttgtaaaa 26452663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 32587787 - 32587739
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||||||||| |||||||| | |||| ||||||||||||||||    
T  32587787 tctctctattgctttggtttttgtgccaatatttcattttctttgtaaa 32587739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 35201427 - 35201371
Alignment:
Q  11 ttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    |||||| ||||||| |||| |||||||||| |||||| |||||||||||| ||||||    
T  35201427 ttctctttctattgttttggtttttgtgtcaatatcttattttctttgtataatttt 35201371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 39714033 - 39714001
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgt 39  Q
    |||||||||||||||||||||||||||||||||    
T  39714033 tactttctctctctattgctttgatttttgtgt 39714001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 42358561 - 42358529
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaa 101  Q
    |||||||||||||||||||||||||||||||||    
T  42358561 gttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 49087090 - 49087038
Alignment:
Q  21 attgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||| |||| |||||||||| ||| ||||||||||||| ||||||||||||||    
T  49087090 attgttttggtttttgtgtcaatacctcattttctttgaaaaattttggttgt 49087038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 54099357 - 54099325
Alignment:
Q  3 tttttactttctctctctattgctttgattttt 35  Q
    |||||||||||||||||||||||||||||||||    
T  54099357 tttttactttctctctctattgctttgattttt 54099325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 21217610 - 21217653
Alignment:
Q  31 tttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  21217610 tttttgtgtcaatacctcattttctttataaaattttggttgtc 21217653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 28700531 - 28700566
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||||||||| ||||||||    
T  28700531 tttttactttctctctctattgctttggtttttgtg 28700566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 104
Target Start/End: Complemental strand, 31157596 - 31157565
Alignment:
Q  73 tcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||    
T  31157596 tcacatatatggatgttcaaataacacaactc 31157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 36121890 - 36121953
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtgtcgatatctca-ttttctttgtaaaat 64  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||| | || |||||||||||||||    
T  36121890 ctttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaat 36121953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 37894242 - 37894171
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||| ||||||| |||||||| |||  |  ||||||| |||||| | ||||||||    
T  37894242 tttttactttctctctctattactttgatatttgtgtcaatacatacttttcttggtaaaaatgtggttgtc 37894171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 38926776 - 38926811
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||| |||||||||||||||||||||    
T  38926776 gttgtcacatatatagatgttcaaataacacaactc 38926811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 44413318 - 44413283
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||| |||||||||||||||||||||    
T  44413318 gttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 44445389 - 44445436
Alignment:
Q  28 tgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||   |||||||||||||||| |||||||||||||||||    
T  44445389 tgatttttgtgcaaatatctcattttctttataaaattttggttgtca 44445436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 46966101 - 46966042
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||||||| ||||||| |||| |||| ||||||||||||   ||||||||||||    
T  46966101 tttttactttctctatctattgttttggttttcgtgtcgatatctatctttctttgtaaa 46966042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6093881 - 6093843
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgt 39  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  6093881 tctttttactttctctctctattgctttggtttctgtgt 6093843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16129590 - 16129660
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggtt 71  Q
    ||||||| |||||| ||| | ||| |||||||||| || ||||| ||||||| || |||||||||||||||    
T  16129590 tctttttcctttctgtctttgttgttttgatttttatgccgatacctcatttcctctgtaaaattttggtt 16129660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 32322065 - 32322099
Alignment:
Q  1 tctttttactttctctctctattgctttgattttt 35  Q
    |||||||||||||||| ||||||||||||||||||    
T  32322065 tctttttactttctctttctattgctttgattttt 32322099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 41443190 - 41443156
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||| |||||||||||||    
T  41443190 ttttactttctctctctattgttttgatttttgtg 41443156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 51465725 - 51465671
Alignment:
Q  20 tattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||| | ||||||||||    
T  51465725 tattgctttgatttttgtgtcaatatttcattttttttttaagactttggttgtc 51465671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 3518595 - 3518554
Alignment:
Q  16 tctctattgctttgatttttgtgtcgatatctcattttcttt 57  Q
    ||||||||||||||||||||||||| ||| || |||||||||    
T  3518595 tctctattgctttgatttttgtgtcaataccttattttcttt 3518554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 8502888 - 8502859
Alignment:
Q  6 ttactttctctctctattgctttgattttt 35  Q
    ||||||||||||||||||||||||||||||    
T  8502888 ttactttctctctctattgctttgattttt 8502859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 31104739 - 31104772
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||||||||||| |||||||||||||||    
T  31104739 tactttctctctctattgttttgatttttgtgtc 31104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42997353 - 42997426
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||| ||||| ||||| |||| | ||| |||  |||||| ||||||||| || |||||||||||||    
T  42997353 tctttttactttatctctttattgttttggtctttttgttaatatcttattttctttatacaattttggttgtc 42997426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 44813448 - 44813387
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaat 64  Q
    |||||||||| |||||||||||||||| |||| ||||| |||  |  |||||||||||||||    
T  44813448 tttttactttatctctctattgctttggttttcgtgtcaatacatggttttctttgtaaaat 44813387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 49780726 - 49780669
Alignment:
Q  18 tctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||| |||||||| | ||| ||| ||||||||||||| || |||||||||    
T  49780726 tctattgctttggtttttgtgccaatacctccttttctttgtaaatttatggttgtca 49780669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 7668111 - 7668079
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaa 101  Q
    |||||||||| ||||||||||||||||||||||    
T  7668111 gttgtcacatgtatggatgttcaaataacacaa 7668079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 14207251 - 14207223
Alignment:
Q  10 tttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||||||||||||||||    
T  14207251 tttctctctctattgctttgatttttgtg 14207223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 14214999 - 14214971
Alignment:
Q  10 tttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||||||||||||||||    
T  14214999 tttctctctctattgctttgatttttgtg 14214971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 39338728 - 39338692
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgt 39  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  39338728 tttttactttttctctctattgttttgatttttgtgt 39338692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 41309272 - 41309300
Alignment:
Q  76 catatatggatgttcaaataacacaactc 104  Q
    |||||||||||||||||||||||||||||    
T  41309272 catatatggatgttcaaataacacaactc 41309300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 44383286 - 44383330
Alignment:
Q  30 atttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||| ||| |||||||||||| |||||||||| |||||    
T  44383286 atttttgtgtcaatacctcattttctttataaaattttgattgtc 44383330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 48944711 - 48944651
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    ||||||||||||||||||||| ||||||| |||||| | |||  |  ||||||||||||||    
T  48944711 tttttactttctctctctattactttgatatttgtgccaatacatatttttctttgtaaaa 48944651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 50559212 - 50559180
Alignment:
Q  3 tttttactttctctctctattgctttgattttt 35  Q
    |||||||||||||||||||||| ||||||||||    
T  50559212 tttttactttctctctctattgttttgattttt 50559180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 51465916 - 51465884
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  51465916 ctttttactttatctctctattgctttgatttt 51465884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 52937252 - 52937288
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  52937252 ctttttactttatctctctattactttgatttttgtg 52937288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 54260197 - 54260169
Alignment:
Q  10 tttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||||||||||||||||    
T  54260197 tttctctctctattgctttgatttttgtg 54260169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 108)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2268510 - 2268407
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||||||| ||| ||||||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2268510 tctttttactttttctttctattgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 2268411  T
Q  101 actc 104  Q
    ||||    
T  2268410 actc 2268407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 46634168 - 46634271
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||||||||||| |||||| ||||||||||||||||  || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  46634168 tctttttactttctctttctattactttgatttttgtgtcactacctcatttcctttgtaaaattttagttgtcacatatatggatgttcaaataacaca 46634267  T
Q  101 actc 104  Q
    ||||    
T  46634268 actc 46634271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37997322 - 37997394
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  37997322 tctttttactttctctctctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgt 37997394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29531609 - 29531506
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||| ||| ||| ||||||| |||| ||||||||||  || ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||    
T  29531609 tctttttattttttctttctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacatgtatggatgttcaaataataca 29531510  T
Q  101 actc 104  Q
    ||||    
T  29531509 actc 29531506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27051089 - 27051013
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||| |||||||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  27051089 tctttttaccttctctctttattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcaca 27051013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 50608625 - 50608551
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  50608625 tttttacttcctctctctattactttgatttttgtgtcaatatctcatttcctttgtaaaattttagttgtcaca 50608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10250518 - 10250442
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| |  ||  |||||||||||||||||||||||||||||||    
T  10250518 tctttttactttctctctctattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtcaca 10250442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11068756 - 11068832
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||||||||||||||  |  ||||||| ||||||||||||||||||| ||||    
T  11068756 tctttttactttctctctctattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttgccaca 11068832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24575854 - 24575778
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| | ||| ||||||| |||| |||||||||||||||||||    
T  24575854 tctttttactttctctctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcaca 24575778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40348862 - 40348938
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||  ||||||||| ||||||||    
T  40348862 tctttttactttctctctctattgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgtcaca 40348938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 7632462 - 7632392
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||||||||||||||||    
T  7632462 tttttactttctctctctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgt 7632392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 38376491 - 38376417
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| |||||||||| |||||||||||||| |  |||||||||||||||||||||||||| ||||||||    
T  38376491 tttttactttttctctctattactttgatttttgtgccactatctcattttctttgtaaaattttgattgtcaca 38376417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 42360269 - 42360327
Alignment:
Q  46 ctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42360269 ctcatttcctttgtaaaattttggttgtcacatatatgaatgttcaaataacacaactc 42360327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29175295 - 29175369
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||  ||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  29175295 tctttttactttctctctct--tgctttggtttttgtgtcaatagctcatttactttgtaaaattttggttgtcaca 29175369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 39440555 - 39440628
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||||||||||||||||  || ||||||| |||| |||||||||| ||||||||    
T  39440555 ttttactttctctctctattgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgtcaca 39440628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 39478505 - 39478581
Alignment:
Q  3 tttttactttctctctctat--tgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||||||  | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  39478505 tttttactttctttctctatattactttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcaca 39478581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 50831754 - 50831685
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||| ||||||||    
T  50831754 tttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtc 50831685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26732293 - 26732369
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| ||||||||||||||| |||| |||||||| |  || ||||||||||||||||||||||||||||||||    
T  26732293 tctttttattttctctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcaca 26732369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37297117 - 37297192
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||||||||  || |||| |||| ||||||||||||||||||||||    
T  37297117 tctttttactttctctctctattgctttggtttttgtgtcactacctca-tttccttgtaaaattttggttgtcaca 37297192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 43175054 - 43175167
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg------------gttgtcacatatatggatgttc 90  Q
    |||||||||||||||||||| |||||| ||||||||||  || ||||||| |||||||||||||||            ||||||||||||||||||||||    
T  43175054 tttttactttctctctctatggctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttc 43175153  T
Q  91 aaataacacaactc 104  Q
    ||||||||||||||    
T  43175154 aaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 42853647 - 42853718
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||| |||||||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||| |||||    
T  42853647 ttttcactttctctctctattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtc 42853718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 39654903 - 39654965
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||    
T  39654903 tctctctctattgctttgatttttgtgtcaatacctcattttctttgtaaatttatggttgtc 39654965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 50721745 - 50721675
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||||||||||||||||| ||||||| |||||||||| ||  |||||||||||||||||||||| |||||    
T  50721745 tttttactttctctctctactgctttggtttttgtgtcaatcactcattttctttgtaaaattttagttgt 50721675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 53801760 - 53801686
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||  ||||||||  |||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  53801760 tctttttactttctctct--attgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcaca 53801686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23369335 - 23369259
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||||||||||||||| |||||||| |  || ||||||| |||||||| |||||||||||||||    
T  23369335 tctttttactttatctctctattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgtcaca 23369259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 51986110 - 51986186
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| |||||| ||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  51986110 tctttttactttctctatctatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 51986186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25123274 - 25123178
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||||||||||||||||| | ||||||||   ||||| ||||| ||||||||||     ||||| ||||||||| ||||||||||||||||    
T  25123274 tctttttactttctctctctattgcttaggtttttgtgctaatatcccatttcctttgtaaaa----agttgttacatatatgaatgttcaaataacaca 25123179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 1627559 - 1627485
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||| |||||| |||||||| |||||||| | ||| ||||||||||||||||| || |||||||||||    
T  1627559 tttttactttccctctctgttgctttggtttttgtgccaatacctcattttctttgtaaatttatggttgtcaca 1627485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 19232134 - 19232065
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||||||||||||||||||||||||| | ||| ||  ||||||||| ||||||||||||||    
T  19232134 tttttactttctctctctattgctttgatttttgtgccaata-ctttttttctttgcaaaattttggttgt 19232065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 31641566 - 31641492
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||| ||||||||||||||||||||  || || |||| |||| |||||||||||||||||||    
T  31641566 tttttactttctgtctccattgctttgatttttgtgtcactaccttatttcctttataaaattttggttgtcaca 31641492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 56474758 - 56474697
Alignment:
Q  13 ctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||| |||| |||||||||| ||| ||||||||||||||||| |||||||||||    
T  56474758 ctctctctattgttttggtttttgtgtcaatacctcattttctttgtaaagttttggttgtc 56474697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 10474113 - 10474041
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||| |||||||||| |||||||||||||||| |||  || ||||||||||||| || |||||||||    
T  10474113 tttttactttttctctctattactttgatttttgtgtcaatacttctttttctttgtaaatttatggttgtca 10474041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 38134421 - 38134497
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| ||||||||| |||| ||||||||||  |  ||||||| |||||||||||||||||| |||||    
T  38134421 tctttttactttctttctctattgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggttatcaca 38134497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 2575780 - 2575717
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| ||| |||||| || ||||||||||||||||||| ||| |||||||||    
T  2575780 tctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgtcaca 2575717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 12387666 - 12387607
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||    
T  12387666 tttttactttgtctctttattgttttgatttttgtgtcaatacctcattttctttgtaaa 12387607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 44539815 - 44539878
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  44539815 tctctctattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgtcaca 44539878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 51255821 - 51255880
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||||||||||||||||||||||| |  ||||| | ||||||||||||||||    
T  51255821 tactttctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaattt 51255880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 5386444 - 5386506
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||||||||||||||||||||||||||||   ||||| | |||||||||| |||||    
T  5386444 ttttactttctctctctattgctttgatttttgtgttactatctaaatttctttgtataattt 5386506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 16019547 - 16019584
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16019547 tttttactttctctctctattgctttgatttttgtgtc 16019584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5622526 - 5622602
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||||||||||||||| ||||||||    || ||||||| |||||||||||||| ||| |||||    
T  5622526 tctttttactttttctctctattgctttggtttttgtgcaactacctcatttcctttgtaaaattttagttatcaca 5622602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15175614 - 15175686
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||| ||| |||||||||||  ||||||||   ||| ||||||| ||||||||||||||||||||    
T  15175614 tctttttactttatctttctattgcttttgtttttgtgctaatacctcatttcctttgtaaaattttggttgt 15175686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 31574940 - 31574880
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||| |||||||||||||||||||||||||||| || |||  | |||||||||||||||    
T  31574940 tttttattttctctctctattgctttgatttttgtatcaatacatgattttctttgtaaaa 31574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 34616637 - 34616702
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| |||||||||||||||      |||||||||| |||||||||||||||| ||||||||||||||||    
T  34616637 tttttattttctctctctattg------tttttgtgtcaatatctcattttctttataaaattttggttgtc 34616702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36177974 - 36178050
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| |||||||||||||| |||||||  |  || ||||||| |||| ||||||||| |||||||||    
T  36177974 tctttttactttctttctctattgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcaca 36178050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 46213038 - 46213110
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||| ||||||| |||||||| ||||||||    || ||||||| ||||||||||||||||||||    
T  46213038 tctttttactttttctctctgttgctttggtttttgtgcaactacctcatttcctttgtaaaattttggttgt 46213110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 52895298 - 52895358
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaa 62  Q
    |||||| ||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  52895298 tttttattttatctctctattgctttgattttcgtgtcaatatctacattttctttgtaaa 52895358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 19473957 - 19473886
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||| ||||| |||||||| || |||| |||||||||| |||  |||||||||||||||||||||| |||||    
T  19473957 ttttaactttttctctctaatgttttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtc 19473886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 26732373 - 26732408
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  26732373 gttgtcacatatatggatgttcaaataacacaactc 26732408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 26910272 - 26910307
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||||||||||||||||||    
T  26910272 tttttactttctctctctattgctttgatttttgtg 26910307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 27965133 - 27965168
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  27965133 gttgtcacatatatggatgttcaaataacacaactc 27965168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 38381077 - 38381006
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| ||||||||||||||||||||||||||||  | ||| ||| |||||||| | ||||| ||||||||    
T  38381077 tttttattttctctctctattgctttgatttttgtaccaatacctctttttctttatgaaattatggttgtc 38381006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 38519868 - 38519927
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||||||||||||||||||||||| |  ||| | | ||||||||||||||||    
T  38519868 tactttctctctctattgctttgatttttgtgccactatttaaatttctttgtaaaattt 38519927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 39195130 - 39195201
Alignment:
Q  6 ttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||| |||||||||| ||| |||| | || ||||||||||||||||||| |||| || |||||    
T  39195130 ttactttctctctatattgctttggtttgtgtgccaatctctcattttctttgtaaaactttgattatcaca 39195201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 51986190 - 51986225
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  51986190 gttgtcacatatatggatgttcaaataacacaactc 51986225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 53786138 - 53786103
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  53786138 gttgtcacatatatggatgttcaaataacacaactc 53786103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 18316009 - 18316071
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||||| |||||||||||||||||||||||  || || | |||||||||| |||||    
T  18316009 ttttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataattt 18316071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 51577686 - 51577720
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||||||||||||||||||||||    
T  51577686 ttttactttctctctctattgctttgatttttgtg 51577720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 11672122 - 11672060
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    ||||||||||||  |||||||||||||||||||||||| |||  | ||||||||| |||||||||    
T  11672122 tttttactttct--ctctattgctttgatttttgtgtcaataatttattttctttataaaatttt 11672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 26724962 - 26724860
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt------------cacatatatggatgttcaaataacacaa 101  Q
    ||||||||||| |||| ||||||||||  || ||||||| |||||||||||||| |||||            ||||||||||||||||||||||||||||    
T  26724962 tctctctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaa 26724863  T
Q  102 ctc 104  Q
    |||    
T  26724862 ctc 26724860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27965055 - 27965129
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| || ||||||||||| ||||||||||  || ||||||| | |  |||||||||||||||||||    
T  27965055 tctttttactttctttccctattgctttggtttttgtgtcactacctcatttccat--taaaattttggttgtcaca 27965129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 35897771 - 35897832
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaat 64  Q
    |||||||||| | | ||||||||||||||||||||||| |||  |||||||| |||||||||    
T  35897771 tttttactttttatttctattgctttgatttttgtgtcaatacttcattttcattgtaaaat 35897832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 42396031 - 42395978
Alignment:
Q  10 tttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||||||||||||||||||||||   ||| |||||||| |||||||||    
T  42396031 tttctctctctattgctttgatttttgtgcaaatacctcattttttttgtaaaa 42395978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 52204925 - 52204958
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  52204925 tactttctctctctattgctttgatttttgtgtc 52204958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 1816675 - 1816639
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||| |||||||||||||||||||||||||||    
T  1816675 ttttactttatctctctattgctttgatttttgtgtc 1816639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 15175694 - 15175730
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactcc 105  Q
    |||||||||||||||||||||||||||| ||||||||    
T  15175694 gttgtcacatatatggatgttcaaataatacaactcc 15175730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 21775341 - 21775269
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| |||||||||||||| ||| |||||| |||| |||||||| || |||| || || ||||||||    
T  21775341 tttactttctttctctattgctttggtttctgtgtcaatatttcattttccttataaatttatgattgtcaca 21775269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 28458378 - 28458318
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaa 62  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| || | |||||||||||||    
T  28458378 tttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaa 28458318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 38338924 - 38338888
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||| |||||||||||||||||||||||||    
T  38338924 ctttttactttatctctctattgctttgatttttgtg 38338888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 38382397 - 38382462
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| |||||||||||||||      |||||||||| ||| |||||||||||| ||||||||||||||||    
T  38382397 tttttattttctctctctattg------tttttgtgtcaatacctcattttctttataaaattttggttgtc 38382462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 48796533 - 48796462
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||||||||| |||||||||| |||||||| ||| ||  |||||||||  | |||||||||||||    
T  48796533 tttttactttctctctcttttgctttgatatttgtgtcaatacctatttttctttg-gatattttggttgtca 48796462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 336808 - 336773
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    ||||| ||||||||||||||||||||||||||||||    
T  336808 tttttgctttctctctctattgctttgatttttgtg 336773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 11546901 - 11546830
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||| ||||||| |||||| | |||  | ||||| ||||||||| | ||||||||    
T  11546901 tttttactttctctctctattactttgatatttgtgccaatacataattttttttgtaaaaatgtggttgtc 11546830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 26492088 - 26492151
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| |||||||| |  ||  |||||| ||||||||||||||| ||||||||    
T  26492088 tctctctattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcaca 26492151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 27354355 - 27354284
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| |||||| |||| ||||||||||||  | ||   ||||||| ||||||||||||||||||||    
T  27354355 tttttactttttctctcaattgttttgatttttgtaccaatccttcattttttttgtaaaattttggttgtc 27354284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 29175373 - 29175408
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||| ||||||||||||||||||||    
T  29175373 gttgtcacatatatgaatgttcaaataacacaactc 29175408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29891915 - 29891986
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| ||||||| ||||||| |||| ||||| |||| ||| ||| |||| ||||||||||| ||||||||    
T  29891915 tttttagtttctctttctattgttttggtttttatgtctatacctctttttttttgtaaaattatggttgtc 29891986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 32130229 - 32130170
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||| |||| |||||||| || |||  |||||||||||||| ||||||||||||    
T  32130229 tctctctatttctttaatttttgtatcaatacatcattttctttgtataattttggttgt 32130170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 36123460 - 36123425
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||| ||||||||||||||    
T  36123460 tttttactttctctctctattactttgatttttgtg 36123425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 39440632 - 39440667
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||| ||||||||||||||||||||    
T  39440632 gttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 44539882 - 44539917
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||| ||||||||||||||||||||    
T  44539882 gttgtcacatatatgaatgttcaaataacacaactc 44539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 47181939 - 47181982
Alignment:
Q  31 tttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  47181939 tttttgtgtcaatacctcattttctttataaaattttggttgtc 47181982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 48402170 - 48402127
Alignment:
Q  31 tttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  48402170 tttttgtgtcaatacctcattttctttataaaattttggttgtc 48402127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 50890074 - 50890039
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    ||||| ||||||||||||||||||||||||||||||    
T  50890074 tttttgctttctctctctattgctttgatttttgtg 50890039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 10780075 - 10779987
Alignment:
Q  10 tttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacat-atatggatgttcaaataacac 99  Q
    |||||||||| |||||||||||||||||| | | | |||| ||||||||| | |||||||||||| ||| | |||| ||||||||||||||    
T  10780075 tttctctctccattgctttgatttttgtgcctaga-ctcactttctttgt-atattttggttgtcccataaaatggttgttcaaataacac 10779987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 10973684 - 10973596
Alignment:
Q  10 tttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacat-atatggatgttcaaataacac 99  Q
    |||||||||| |||||||||||||||||| | | | |||| ||||||||| | |||||||||||| ||| | |||| ||||||||||||||    
T  10973684 tttctctctccattgctttgatttttgtgcctaga-ctcactttctttgt-atattttggttgtcccataaaatggttgttcaaataacac 10973596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 20760327 - 20760396
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||| |||||| ||||||||| ||||||||||| ||| ||| |||| ||| ||||||| ||||||||    
T  20760327 ttttacttcctctctttattgctttaatttttgtgtcaatacctc-ttttttttataaaattatggttgtc 20760396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 20766718 - 20766787
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||| |||||| ||||||||| ||||||||||| ||| ||| |||| ||| ||||||| ||||||||    
T  20766718 ttttacttcctctctttattgctttaatttttgtgtcaatacctc-ttttttttataaaattatggttgtc 20766787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 26492156 - 26492190
Alignment:
Q  70 ttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||| |||||||||||||||||||||    
T  26492156 ttgtcacatatatagatgttcaaataacacaactc 26492190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 47288153 - 47288223
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||| ||||||||||| |||| |||  ||||||||| ||  ||||||||||||| || |||||||    
T  47288153 tttttactttttctctctattgttttggtttccgtgtcgatacctacttttctttgtaaatttatggttgt 47288223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 56364017 - 56363975
Alignment:
Q  32 ttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtc 56363975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 9393836 - 9393873
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  9393836 tttttattttctctttctattgctttgatttttgtgtc 9393873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 14113614 - 14113577
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  14113614 tttttactttatctctctattgctttgattttcgtgtc 14113577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 29227239 - 29227206
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||| ||||||||    
T  29227239 tactttctctctctattgctttgatatttgtgtc 29227206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 41262341 - 41262288
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgta 60  Q
    |||||||| ||||||||||||||||||||||| |  ||||| | ||||||||||    
T  41262341 tactttctttctctattgctttgatttttgtgccattatctaaatttctttgta 41262288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 45083120 - 45083149
Alignment:
Q  69 gttgtcacatatatggatgttcaaataaca 98  Q
    ||||||||||||||||||||||||||||||    
T  45083120 gttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 49449150 - 49449093
Alignment:
Q  17 ctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||| |||| ||||||||   ||| ||||||||||||||||||||||| |||||    
T  49449150 ctctattgttttggtttttgtgctaatacctcattttctttgtaaaattttgattgtc 49449093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 49896667 - 49896630
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  49896667 tttttactttatctctctattgctttgattttcgtgtc 49896630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 193603 - 193663
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||| |||||||||||||| |||||||||| ||||| |||  |  ||||||||||||||    
T  193603 tttttattttctctctctattactttgattttcgtgtcaatacatatttttctttgtaaaa 193663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 2109515 - 2109603
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||| |||| |||  ||||| ||||||  |||| |||||||  || | ||||||||| | |||| |||||||||||||||    
T  2109515 tctctctctattgttttggtttccgtgtcaatatctacttttgtttgtaactttatagttgtcacacaaatggttgttcaaataacaca 2109603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 11068836 - 11068868
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaa 101  Q
    ||||||||||||||| |||||||||||||||||    
T  11068836 gttgtcacatatatgaatgttcaaataacacaa 11068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 15522425 - 15522485
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||| ||||| |||||||||| |||| ||||| |||  | |||||||||||||||    
T  15522425 tttttactttatctctatattgctttggttttcgtgtcaatacatgattttctttgtaaaa 15522485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 18882977 - 18882945
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  18882977 ctttttactttatctctctattgctttgatttt 18882945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 22813721 - 22813685
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  22813721 ttttactttttctttctattgctttgatttttgtgtc 22813685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 26908084 - 26908052
Alignment:
Q  3 tttttactttctctctctattgctttgattttt 35  Q
    |||||||||||||||| ||||||||||||||||    
T  26908084 tttttactttctctctatattgctttgattttt 26908052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 31995916 - 31995852
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    |||| ||||||| ||| ||||| |||  |||||||||| ||| |||||||||||| |||||||||    
T  31995916 ttttaactttctttctttattgttttagtttttgtgtcaatacctcattttctttctaaaatttt 31995852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 32696251 - 32696311
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaa 62  Q
    |||||||||| ||||| ||||||||||||||| ||| | |||||| | |||||||||||||    
T  32696251 tttttactttatctctttattgctttgattttcgtgccaatatctactttttctttgtaaa 32696311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 41849761 - 41849821
Alignment:
Q  3 tttttactttctctctctattgcttt-gatttttgtgtcgatatctcattttctttgtaaa 62  Q
    ||||||||||||  |||||||||||| | |||||||||| |||| || |||||||||||||    
T  41849761 tttttactttcttcctctattgctttggttttttgtgtcaatatttctttttctttgtaaa 41849821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 55266097 - 55266133
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  55266097 ttttactttctctctttattactttgatttttgtgtc 55266133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 81)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22416281 - 22416384
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||||||||||||||||||| |||||||| |  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22416281 tctttttactttctctctctattgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 22416380  T
Q  101 actc 104  Q
    ||||    
T  22416381 actc 22416384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2076637 - 2076713
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  2076637 tctttttactttctctttctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcaca 2076713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 41195653 - 41195728
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  41195653 ctttttactttctctctctattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcaca 41195728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18254212 - 18254136
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| |  |||||||||| ||||||||||||||||||||||||    
T  18254212 tctttttactttctctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcaca 18254136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41042322 - 41042396
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||||||| |||| |||||||||||||||||    
T  41042322 tctttttactttctctctctattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgtca 41042396  T

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Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 37737963 - 37737898
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  37737963 tctctctctattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcaca 37737898  T

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Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9647200 - 9647276
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||  |||||| ||||||||||||||||||||||||    
T  9647200 tctttttactttctctctctattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtcaca 9647276  T

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Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 34945093 - 34945018
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcac 76  Q
    |||||||||||||||||||||||||||||||||||||| |  || |||||||  ||||||||||||||||||||||    
T  34945093 tctttttactttctctctctattgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgtcac 34945018  T

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Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 44287441 - 44287342
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||||||||| |||| || ||||| |   | ||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  44287441 tttactttctctctctattgttttggttattgtgccacaacctcatttcctttgtaaaattttggttgtcacatatatagatattgaaataacacaactc 44287342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 9207660 - 9207734
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  9207660 tttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 9207734  T

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Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 27490731 - 27490657
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||| ||||||||||||||||||||||||||||||  |||  |||||||||||||||||||||| ||||||||    
T  27490731 tttttaatttctctctctattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgtcaca 27490657  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 7664067 - 7663995
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||| || |||||||||    
T  7664067 tttttactttctctctctattgctttggtttttgtgtcaatacctctttttctttgtaaatttatggttgtca 7663995  T

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Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32477400 - 32477476
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| |||||||||||||||||| |  ||| ||||||| |||||| |||||||||||||||||    
T  32477400 tctttttactttctctctatattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgtcaca 32477476  T

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Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 43487449 - 43487562
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttgg------------ttgtcacatatatggatgttc 90  Q
    |||||||||||| |||||||||||||| ||||||||||  || ||||||| ||||||||||||||||            |||||||||||||||||||||    
T  43487449 tttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttc 43487548  T
Q  91 aaataacacaactc 104  Q
    ||||||||||||||    
T  43487549 aaataacacaactc 43487562  T

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Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 44977500 - 44977424
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacata 79  Q
    ||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| || |||||||| ||||    
T  44977500 tttttactttctctctctattgctttggtttttgtgtcaataccccattttctttgtaaatttatggttgtctcata 44977424  T

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Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 17388561 - 17388503
Alignment:
Q  46 ctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  17388561 ctcatttcctttgtaaaattttgattgtcacatatatagatgttcaaataacacaactc 17388503  T

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Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 44654704 - 44654765
Alignment:
Q  13 ctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  44654704 ctctctctattgttttgatttttgtgtcgatttctcattttctttataaaattttagttgtc 44654765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6511319 - 6511399
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatata 81  Q
    |||||||| ||||||| |||||||||||| ||||||||||  || ||||||| |||| |||||||||| ||||||||||||    
T  6511319 tctttttattttctctttctattgctttggtttttgtgtcactacctcatttcctttataaaattttgattgtcacatata 6511399  T

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Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9194309 - 9194385
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| |||| |||||||| |  || |||||||  |||||||||||||||||||||||    
T  9194309 tctttttactttctctctctattgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgtcaca 9194385  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 19642668 - 19642739
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||| ||||||||||||||||||||||||||||||||| ||   |||||||||||| |||||| ||||||||    
T  19642668 ttttcactttctctctctattgctttgatttttgtgtcaatgcttcattttctttgcaaaattgtggttgtc 19642739  T

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Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 42821444 - 42821541
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||| |||||||| |||||||||||| |||  ||||||||||||| ||||| |||||||||   | |||| |||||||||||||||||||    
T  42821444 tttactttctctctttattgctt-gatttttgtgtcaatacatcattttctttgt-aaattatggttgtcaataaaatggttgttcaaataacacaactc 42821541  T

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Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1248754 - 1248869
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt------------ggttgtcacatatatggatgt 88  Q
    |||||||||||| |||||||||||||||| |||||||| |  || ||||||| ||||||||||||||             ||||||||||||||||||||    
T  1248754 tctttttactttatctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgt 1248853  T
Q  89 tcaaataacacaactc 104  Q
    ||||||||||||||||    
T  1248854 tcaaataacacaactc 1248869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 10060428 - 10060339
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaa 101  Q
    ||||||||| |||||||  ||||| |  | ||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||| ||||    
T  10060428 tctctctctgttgctttagtttttatagcaatatctcatttcctttataaaattttagttgtcacatatatgaatgttcaaataatacaa 10060339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 1907764 - 1907692
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||||||||||||| ||||||||||||||| ||  | | ||||||||||||| || |||||||||    
T  1907764 tttttactttctctctctattgttttgatttttgtgtcaattccgctttttctttgtaaatttatggttgtca 1907692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 42091503 - 42091431
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||  ||||||||||||||| ||||||||||  || ||| ||| ||||||||||||||||||||||||    
T  42091503 tttacttttcctctctattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcaca 42091431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42421901 - 42421825
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| |||||||||| | |||||| |  || ||||||| |||| |||||||||||||||||||    
T  42421901 tctttttactttctctctttattgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgtcaca 42421825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 22888809 - 22888705
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg------------gttgtcacatatatggatgttcaaataacac 99  Q
    ||||||| |||||||||| |||||||| | ||| ||||||| |||||||||||||||            |||||||||||||||||||||||||||||||    
T  22888809 tctctctttattgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacac 22888710  T
Q  100 aactc 104  Q
    |||||    
T  22888709 aactc 22888705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 1352459 - 1352529
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||| | |||||||||||||| |||||||| | ||  |||||||||||||||||||||| |||||    
T  1352459 tttttactttatttctctattgctttggtttttgtgccaatcactcattttctttgtaaaattttagttgt 1352529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3838883 - 3838817
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    |||||||||||||||||||||||| |||||||||||||||  |   |||||| ||||||||||||||    
T  3838883 tctttttactttctctctctattgttttgatttttgtgtcactgcttcatttcctttgtaaaatttt 3838817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 6049343 - 6049272
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||  ||||||| |||||||| | ||| ||||||| ||||||||||||||| ||||||||    
T  6049343 ttttactttctctctct--tgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcaca 6049272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 10216920 - 10216982
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatt 65  Q
    ||||||||||||||||||||||||| | |||||||||| ||| ||  ||||||||||||||||    
T  10216920 tttttactttctctctctattgcttcggtttttgtgtcaatacctttttttctttgtaaaatt 10216982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 16973762 - 16973692
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||| |||||||  ||||| |||||||||||| ||| || ||||||||| |||||||||||||||||||    
T  16973762 tttttattttctcttactattactttgatttttgggtcaatttctcattttatttgtaaaattttggttgt 16973692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 29349576 - 29349650
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||| || ||||||| || |||||||||||||| |||||  | |||||||||||||||||||| ||||||||    
T  29349576 tttttaccttttctctctgttactttgatttttgtgccgatacattattttctttgtaaaattttgattgtcaca 29349650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 7258560 - 7258491
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||||||||||||| |||| | | ||| |||||||| ||||||| | ||||||    
T  7258560 tttactttctctctctattgctttgatttttatgtcaagacctctttttctttataaaattatagttgtc 7258491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 7698241 - 7698305
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    |||||||||||||| ||||||||||||||||||||| |  || || |||| ||||||||||||||    
T  7698241 tttttactttctctttctattgctttgatttttgtgccactacctaatttcctttgtaaaatttt 7698305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9760086 - 9760162
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||   ||||||| |  || ||||||| ||| | ||||||||||||||||||    
T  9760086 tctttttactttctctctctattgctttagattttgtgccactacctcatttccttggaaaaattttggttgtcaca 9760162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9990759 - 9990835
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||  |  ||  |||||| ||||||||||||||  ||||||||    
T  9990759 tctttttactttctctctctattgctttggtttttgtaccactacttcatttcctttgtaaaattttaattgtcaca 9990835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 12070918 - 12070978
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||||||| ||||||||||||||||| ||||| |||  | |||||||||||||||    
T  12070918 tttttactttctctttctattgctttgattttcgtgtcaatacatgattttctttgtaaaa 12070978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 18846681 - 18846753
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||| |||||||||||||  | |||  ||||||| |||| ||||||||| ||||||    
T  18846681 tttttactttctctctctattactttgatttttgtaccaatacatcattttttttgcaaaattttgattgtca 18846753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 19633354 - 19633426
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| ||||| |||||||| ||||||| ||  || ||||||| ||||||||||||||| ||||||||    
T  19633354 tttactttctttctctgttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcaca 19633426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 19830255 - 19830327
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| ||||| |||||||| ||||||| ||  || ||||||| ||||||||||||||| ||||||||    
T  19830255 tttactttctttctctgttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcaca 19830327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 7502411 - 7502340
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||| |||||| |||| | |||||||||||||||| ||| ||| |||||||| ||||||| ||||||||    
T  7502411 tttttaccttctctttctaatactttgatttttgtgtcaatacctctttttctttataaaattatggttgtc 7502340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 8848696 - 8848624
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||  |||||||||||||||||||||  | |||  |||||||||||| ||||||||| ||||||||    
T  8848696 tttttactttct--ctctattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtcaca 8848624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 16011502 - 16011573
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||| |||||||| |||||||| ||||||| |||||||  |||||| |||| ||||||||||||| ||||||    
T  16011502 ttttcactttctcactctattgttttgattcttgtgtcactatctctttttttttgtaaaattttagttgtc 16011573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 21611578 - 21611543
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  21611578 gttgtcacatatatggatgttcaaataacacaactc 21611543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 23690509 - 23690438
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||| |||||||| |||| |||||||||| ||| ||| ||| |||||||||| | ||||||||    
T  23690509 tttttactttctcactctattgttttggtttttgtgtcaatacctcttttcctttgtaaaaatatggttgtc 23690438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 39147836 - 39147895
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||||||| | ||||| ||||||||||||||| ||| |||||||| ||||||||    
T  39147836 tttttactttctctttgtattgttttgatttttgtgtcaatacctcattttttttgtaaa 39147895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 33273560 - 33273518
Alignment:
Q  31 tttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  33273560 tttttgtgtcaatatctcattttctttataaaattttggttgt 33273518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19109096 - 19109059
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19109096 tctttttattttctctctctattgctttgatttttgtg 19109059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 6049268 - 6049236
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaa 101  Q
    |||||||||||||||||||||||||||||||||    
T  6049268 gttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 14328452 - 14328512
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||||||||||| ||||||||||||| ||||| |||  | |||||||| ||||||    
T  14328452 tttttactttctctctctgttgctttgattttcgtgtcaatacatgattttcttagtaaaa 14328512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 31578506 - 31578542
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31578506 ttttactttatctctctattgctttgatttttgtgtc 31578542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 32944503 - 32944467
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||| |||||||||||||||||||||||||||    
T  32944503 ttttactttttctctctattgctttgatttttgtgtc 32944467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 3771442 - 3771513
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||| |||||||||||||||| ||||||| |||||||| |||  |  |||||||||||||| | ||||||||    
T  3771442 ttttcactttctctctctattactttgatatttgtgtcaatacgtacttttctttgtaaaaatgtggttgtc 3771513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 3838803 - 3838768
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||| |||||||||||||||||||||    
T  3838803 gttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 9760166 - 9760201
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||| |||||||||||||||||||||    
T  9760166 gttgtcacatatatagatgttcaaataacacaactc 9760201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 104
Target Start/End: Original strand, 9990843 - 9990874
Alignment:
Q  73 tcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||    
T  9990843 tcacatatatggatgttcaaataacacaactc 9990874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 11965868 - 11965899
Alignment:
Q  7 tactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||||||||||||||    
T  11965868 tactttctctctctattgctttgatttttgtg 11965899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 40
Target Start/End: Original strand, 14871715 - 14871746
Alignment:
Q  9 ctttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||||||||||    
T  14871715 ctttctctctctattgctttgatttttgtgtc 14871746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 19843555 - 19843590
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19843555 tttttcctttctctctctattgctttgatttttgtg 19843590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 25270555 - 25270512
Alignment:
Q  31 tttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  25270555 tttttgtgtcaatacctcattttctttataaaattttggttgtc 25270512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 29449282 - 29449317
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||| ||||||||||||||    
T  29449282 tttttactttctctctctattactttgatttttgtg 29449317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 32477480 - 32477515
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||| ||||||||||||||||||||    
T  32477480 gttgtcacatatatgaatgttcaaataacacaactc 32477515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 34
Target Start/End: Original strand, 36774609 - 36774640
Alignment:
Q  3 tttttactttctctctctattgctttgatttt 34  Q
    ||||||||||||||||||||||||||||||||    
T  36774609 tttttactttctctctctattgctttgatttt 36774640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 37037310 - 37037366
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaa 61  Q
    |||||| ||||||||| |||| |||||||||||||||  |||||||| |||||||||||    
T  37037310 tttttattttctctctttattactttgatttttgtgt--atatctcactttctttgtaa 37037366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 41056720 - 41056677
Alignment:
Q  31 tttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  41056720 tttttgtgtcaatacctcattttctttataaaattttggttgtc 41056677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 7084715 - 7084681
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgt 37  Q
    |||||||||||||| ||||||||||||||||||||    
T  7084715 tttttactttctctttctattgctttgatttttgt 7084681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 14255374 - 14255444
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||||| ||| ||| |||||  ||| ||  ||||||||||||| || ||||||||    
T  14255374 ttttactttctctctctattgcattggtttatgtgttaatacctacttttctttgtaaatttatggttgtc 14255444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 29361090 - 29361124
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgt 37  Q
    |||||||||| ||||||||||||||||||||||||    
T  29361090 tttttactttatctctctattgctttgatttttgt 29361124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 36587462 - 36587408
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||||||||||||||||||| |  ||||| | |||||||||| |||||    
T  36587462 tctctctctattgctttgatttttgtgccactatctaaatttctttgtataattt 36587408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 41042403 - 41042437
Alignment:
Q  70 ttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||| |||||    
T  41042403 ttgtcacatatatggatgttcaaataacagaactc 41042437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 10521358 - 10521309
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattt 52  Q
    ||||||| |||||  ||||||||||||||||||||||| |||| ||||||    
T  10521358 tttttaccttctccatctattgctttgatttttgtgtctatatatcattt 10521309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 17569704 - 17569651
Alignment:
Q  6 ttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgt 59  Q
    ||||||||||||| ||||| |||| |||||||||| ||| ||||||||| ||||    
T  17569704 ttactttctctctttattgttttgctttttgtgtcaatacctcattttccttgt 17569651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 22446012 - 22445967
Alignment:
Q  16 tctctattgctttgatttttgtgtcgatatctcattttctttgtaa 61  Q
    ||||||||||||| ||||||||||| ||| ||||||| ||||||||    
T  22446012 tctctattgctttaatttttgtgtcaatacctcatttcctttgtaa 22445967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 34134772 - 34134735
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  34134772 tttttactttatctctctattgctttgattttcgtgtc 34134735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 37316811 - 37316778
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||| ||||||||    
T  37316811 tactttctctctctattgctttgatatttgtgtc 37316778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 14233721 - 14233685
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  14233721 ctttttactttatctctctattgctttggtttttgtg 14233685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 15269930 - 15269962
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  15269930 ctttttactttatctctctattgctttgatttt 15269962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 33583221 - 33583164
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    ||||||||||||  |||||||| |||| ||||| |||| ||| |||||||||||||||||    
T  33583221 tttttactttct--ctctattgttttgttttttttgtcaatacctcattttctttgtaaa 33583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 39449336 - 39449368
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  39449336 ctttttactttatctctctattgctttgatttt 39449368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 44239108 - 44239144
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  44239108 ttttattttatctctctattgctttgatttttgtgtc 44239144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10731614 - 10731717
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||||||| |||||||||||||  ||||||||||||||||    
T  10731614 tctttttactttctctctctattgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgtcacatatatcaatgttcaaataacaca 10731713  T
Q  101 actc 104  Q
    ||||    
T  10731714 actc 10731717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31249527 - 31249424
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||||||||||||||||||| |||||||  |  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31249527 tctttttactttctctctctattgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 31249428  T
Q  101 actc 104  Q
    ||||    
T  31249427 actc 31249424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 37133863 - 37133789
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  37133863 tttttactttctctttctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcaca 37133789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11253545 - 11253469
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  11253545 tctttttattttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcaca 11253469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29025330 - 29025401
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  29025330 tttttaccttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtc 29025401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 5740786 - 5740715
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||| ||||||||    
T  5740786 tttttactttctctctctattgttttggtttttgtgtcgatacctctttttctttgtaaaattatggttgtc 5740715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27325826 - 27325941
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg------------gttgtcacatatatggatgt 88  Q
    ||||||||||||||||||||||||||||| |||||||| |  || ||||||| |||||||||||||||            ||||||||||||||||||||    
T  27325826 tctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgt 27325925  T
Q  89 tcaaataacacaactc 104  Q
    ||||||||||||||||    
T  27325926 tcaaataacacaactc 27325941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 32501197 - 32501123
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||| ||||||||||||| ||||||||||||||||  || ||||||| ||||||||||||||||||||||||    
T  32501197 tttttacgttctctctctattactttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 32501123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 43397851 - 43397925
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| |||||| ||||| |||||||| |  |||||||||||||||||||||||||||||||||||    
T  43397851 tttttactttctctttctattactttggtttttgtgccactatctcattttctttgtaaaattttggttgtcaca 43397925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 10902775 - 10902839
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    |||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||||||||    
T  10902775 tttttactttctctctctattgctttgatttttgtgccaatacatcattttctttgtaaaatttt 10902839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12898932 - 12898856
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||||||||||||||| |||||| | |  |||||||||| ||||||||||||||||||||||||    
T  12898932 tctttttactttatctctctattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcaca 12898856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22719508 - 22719584
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||||||    || |||||||||||||||||||||||||| |||||    
T  22719508 tctttttactttctctctctattgctttggtttttgtgcaactacctcattttctttgtaaaattttggttatcaca 22719584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36660453 - 36660377
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| || ||||||| |||  ||||||||||| |||||||||| ||||||||    
T  36660453 tctttttactttctctctctattgctttggttattgtgtcaatacttcattttctttataaaattttgattgtcaca 36660377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5277502 - 5277424
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacata 79  Q
    |||||||||||||||||||||||||||   ||||||||||  || ||||||| ||||||||||||||| ||||||||||    
T  5277502 tctttttactttctctctctattgcttaagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcacata 5277424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36816619 - 36816543
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| ||||||||||||||||||||||||||  |||  |||||||||||| ||||||||| || |||||    
T  36816619 tctttttactttttctctctattgctttgatttttgtgttaatacgtcattttctttgcaaaattttgattatcaca 36816543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 45405602 - 45405662
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||||||||||||||||||||||||| ||||| |||| | |||||||||||||||    
T  45405602 tttttactttctctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaa 45405662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 10839483 - 10839412
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||| |||||||||||| |||||||| | |||| | ||||||||||||||||||| ||||||    
T  10839483 tttttactttctctatctattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttgtc 10839412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 13106550 - 13106620
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||| ||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||| || |||||||    
T  13106550 tttttgctttctctctctattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgt 13106620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 23754707 - 23754637
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||| |||| |||||| |||| |||||||||| ||  ||||||||||||||||||||||||||||    
T  23754707 tttttactttatctcactattgttttggtttttgtgtcaatcactcattttctttgtaaaattttggttgt 23754637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4054289 - 4054213
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| |||||||||| ||||||||||  || |||||||  |||||||| ||||| ||||||||    
T  4054289 tctttttactttctctctttattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcaca 4054213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34186675 - 34186751
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| |||||||||||||| ||||| ||||||||||  || ||||||| ||||| ||||||||| ||||||||    
T  34186675 tctttttattttctctctctattactttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcaca 34186751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36251395 - 36251469
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcac 76  Q
    ||||||||||||||||||||||| |||||  |||||||||  || ||||||| ||||||||||||||| |||||||    
T  36251395 tctttttactttctctctctattactttg-gttttgtgtcactacctcatttcctttgtaaaattttgattgtcac 36251469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 7271929 - 7271994
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| ||||||||||  ||||||||||  |||| ||||||||| ||||||||    
T  7271929 tctctctctattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgtcaca 7271994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 39856115 - 39856164
Alignment:
Q  10 tttctctctctattgctttgatttttgtgtcgatatctcattttctttgt 59  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  39856115 tttctctctctattgctttgatttttgtgtcaatatctatttttctttgt 39856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 6440152 - 6440224
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||||||| | ||||||||||||||||||| |||  |  |||||||||||||| | |||||||||    
T  6440152 tttttactttctctctttcttgctttgatttttgtgtcaatacatacttttctttgtaaaaatatggttgtca 6440224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37449428 - 37449352
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| |||||||||||||| ||||||||    || ||||||| ||||||||||||||| || |||||    
T  37449428 tctttttactttctgtctctattgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcaca 37449352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 2883267 - 2883330
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||| ||| ||||||||||||||  |||  ||||||||||||||||||||| |||||||    
T  2883267 tctctctcttttgttttgatttttgtgttaatacttcattttctttgtaaaattttagttgtca 2883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 5600983 - 5600924
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||| |||||||||||||||||||||   |||| | ||||||||||||||||    
T  5600983 tactttctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5600924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 5639637 - 5639696
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||| |||||||||||||||||||||   |||| | ||||||||||||||||    
T  5639637 tactttctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5639696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 38958552 - 38958493
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||||||| | |||||||||| |||||||||  ||| |||||||||||||||||    
T  38958552 tttttactttctctttttattgctttggtttttgtgttcatacctcattttctttgtaaa 38958493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 40517328 - 40517399
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| ||| ||| ||||||||||||||||| ||||| ||||||  ||||||||||||| || ||||||||    
T  40517328 tttttattttatctttctattgctttgattttcgtgtcaatatctacttttctttgtaaatttatggttgtc 40517399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 42768285 - 42768348
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| ||||||||||  |  ||||||| |||||||||||||| |||||||||    
T  42768285 tctctctattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcaca 42768348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 44061789 - 44061851
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||| | |||||||||| |||||    
T  44061789 ttttactttctctttctgttgctttgatttttgtgtcactatctaaatttctttgtataattt 44061851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 10592281 - 10592244
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  10592281 tttttactttctctctctattgctttggtttttgtgtc 10592244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 27854767 - 27854705
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    ||||||||||||  |||||||| ||||||||||||| | |||| | |||||||||||||||||||    
T  27854767 tttttactttct--ctctattgttttgatttttgtgccaatatttaattttctttgtaaaatttt 27854705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 44090961 - 44090994
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  44090961 tactttctctctctattgctttgatttttgtgtc 44090994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 12735012 - 12734936
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacata 79  Q
    ||||||| || ||||| |||| |||||||||||||||| ||| ||  ||||| ||||||| |||| |||||||||||    
T  12735012 tttttaccttatctctatattactttgatttttgtgtcaatacctacttttcattgtaaatttttagttgtcacata 12734936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 24479323 - 24479367
Alignment:
Q  33 tttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||    
T  24479323 tttgtgtcaatatctcatttcctttgtaaaattttagttgtcaca 24479367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 35067231 - 35067303
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||||||||| |||||||| | | |  |  |||||||||||||| | |||||||||    
T  35067231 tttttactttctctctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtca 35067303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 38578366 - 38578278
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttca 91  Q
    |||||||||||| | ||||||| |||||||||| ||   ||| || ||||  ||||||||||||| ||||||||| |||| ||||||||    
T  38578366 tttttactttctttttctattgatttgatttttatgctaatacctaatttcttttgtaaaattttagttgtcacacatatagatgttca 38578278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 16613704 - 16613739
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||||| |||||||||||||||||||||||||    
T  16613704 tttttactttatctctctattgctttgatttttgtg 16613739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 21526281 - 21526210
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||| | ||||||||  ||||||| | ||| ||| |||||||||| ||||| ||||||||    
T  21526281 tttttactttctctctttgttgctttggattttgtgccaatacctctttttctttgtgaaattatggttgtc 21526210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 22719588 - 22719623
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||||| |||||||||||||||||||    
T  22719588 gttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 25830246 - 25830175
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||| ||||||| |||||| | |||  |  |||||||||||||| | ||||||||    
T  25830246 tttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgtc 25830175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 25987783 - 25987724
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||| |||||||||||||||||||||||||||  || || | |||||||||| |||||    
T  25987783 tactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 25987724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 33451560 - 33451529
Alignment:
Q  7 tactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||||||||||||||    
T  33451560 tactttctctctctattgctttgatttttgtg 33451529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 34639605 - 34639668
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg 68  Q
    |||| |||||||||||||| ||||| || |||||||  || |||||||| ||||||||||||||    
T  34639605 tttattttctctctctattactttggttattgtgtcactacctcattttatttgtaaaattttg 34639668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 41639800 - 41639726
Alignment:
Q  3 tttttactttctct--ctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||  |||||||||||||||||||||||| | |  |  |||||||||||||| | |||||||||    
T  41639800 tttttactttctctctctctattgctttgatttttgtgtcaacacatacttttctttgtaaaaatatggttgtca 41639726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 104
Target Start/End: Original strand, 42768356 - 42768387
Alignment:
Q  73 tcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||    
T  42768356 tcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 43632327 - 43632280
Alignment:
Q  15 ctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    ||||||||||||||| |||||||||| ||| |||||||| ||||||||    
T  43632327 ctctctattgctttggtttttgtgtcaatacctcattttatttgtaaa 43632280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 44825517 - 44825576
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||||||||||||||||||||||| |   ||||| | |||||||||| |||||    
T  44825517 tactttctctctctattgctttgatttttgtatatttatctaaatttctttgtataattt 44825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 24798358 - 24798304
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttcttt 57  Q
    |||||||||||||| ||||||| |||||||||| | || ||||||| ||||||||    
T  24798358 tttttactttctctttctattgttttgatttttatatcaatatctctttttcttt 24798304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 34718185 - 34718219
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgt 37  Q
    |||||||||| ||||||||||||||||||||||||    
T  34718185 tttttactttatctctctattgctttgatttttgt 34718219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 44064435 - 44064465
Alignment:
Q  10 tttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||||||||||||||||||||||||    
T  44064435 tttctctctctattgctttgatttttgtgtc 44064465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2730963 - 2730926
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  2730963 tctttttactttctctctcaactgctttgatttttgtg 2730926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10692507 - 10692544
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  10692507 tctttttactttctctctctattgttttggtttttgtg 10692544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 36885489 - 36885413
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaaattttggttgtcacata 79  Q
    |||||||||| ||||| ||||||||||||||| ||||| ||| || | |||||||||| ||||| |||||||| ||||    
T  36885489 tttttactttatctctttattgctttgattttcgtgtcaatacctactttttctttgt-aaattatggttgtcccata 36885413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 3413193 - 3413133
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||||| | |||||||||||| |||||||| | |||  | |||||||||||||||    
T  3413193 tttttactttctttttctattgctttggtttttgtgccaatacatgattttctttgtaaaa 3413133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 4658265 - 4658229
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  4658265 ctttttactttatctctctattgctttggtttttgtg 4658229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 6445247 - 6445283
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgt 39  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  6445247 tttttactttatctctctattgttttgatttttgtgt 6445283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 7777180 - 7777144
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgt 39  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  7777180 tttttactttctctctctattactttgatatttgtgt 7777144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 8671556 - 8671496
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||| |||||||||| ||||||||||||| || |||| |  |||| |||||||||    
T  8671556 tttttactttatctctctattactttgatttttgtatcaatatatttttttttttgtaaaa 8671496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 16872158 - 16872126
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  16872158 ctttttactttatctctctattgctttgatttt 16872126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 34694861 - 34694909
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||||||||||||||  |||| ||| || ||||||||||||||    
T  34694861 tctctctattgctttgattttcatgtcaatacctaattttctttgtaaa 34694909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 36816539 - 36816507
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaa 101  Q
    |||||||||||||| ||||||||||||||||||    
T  36816539 gttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 45405980 - 45405948
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgt 39  Q
    |||||||||||||||||| ||||||||||||||    
T  45405980 tactttctctctctattgttttgatttttgtgt 45405948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 5080568 - 5080467
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    ||||||||||||||||||||||||||  ||||||||||  || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5080568 tttttactttctctctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttggttatcacatatatggatgttcaaataacacaac 5080469  T
Q  103 tc 104  Q
    ||    
T  5080468 tc 5080467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8098600 - 8098497
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||||||||||||||||||| ||||||||||  || || |||| |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  8098600 tctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttctaaaattttggttgtcacatatatgaatgttcaaataacaca 8098501  T
Q  101 actc 104  Q
    ||||    
T  8098500 actc 8098497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 277061 - 277135
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||| ||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  277061 tttttaatttttctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcaca 277135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 22079564 - 22079490
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||||||    
T  22079564 tttttactttctctctctattgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcaca 22079490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 26595419 - 26595489
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  26595419 tttttactttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgt 26595489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32316931 - 32316855
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||||||||||||||| ||||||||||  || ||||||||||||||||||||||||||||||||    
T  32316931 tctttttactttatctctctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcaca 32316855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 3853308 - 3853237
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  3853308 ttttaactttctctctctattgctttgatttttgtgtcaatatctcattttctttgtaaaatctttgttgtc 3853237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 552861 - 552937
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  552861 tctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 552937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18737570 - 18737494
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| ||||| |||| |||||||| | ||| ||||||||||||||||||||||||||||||||    
T  18737570 tctttttactttctctctttattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcaca 18737494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 31883302 - 31883233
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||| ||||||||    
T  31883302 tttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtc 31883233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34047455 - 34047531
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||  || |||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||    
T  34047455 tctttttatcttatctctctattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcaca 34047531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 5694152 - 5694081
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| ||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  5694152 tttttactttttctctctattgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtc 5694081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 13689995 - 13689881
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttgg------------ttgtcacatatatggatgttc 90  Q
    |||||||||| | ||||||||||||||||||||||||| ||| ||||||| |||| ||||||||| |            |||||||||||||||||||||    
T  13689995 tttttactttttttctctattgctttgatttttgtgtcaatacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttc 13689896  T
Q  91 aaataacacaactcc 105  Q
    |||||||||||||||    
T  13689895 aaataacacaactcc 13689881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 4820448 - 4820508
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||    
T  4820448 tctctctattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtc 4820508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11612256 - 11612332
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| ||||||||||||| |||||||||   ||| ||||||||||||||||||||||| || |||||    
T  11612256 tctttttactttctttctctattgctttaatttttgtgcaaatacctcattttctttgtaaaattttgattatcaca 11612332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15974676 - 15974752
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| |||||||||||||||||||| |||||||||   ||  |||||| ||||||||||||||||||||||||    
T  15974676 tctttttattttctctctctattgctttggtttttgtgttactacttcatttcctttgtaaaattttggttgtcaca 15974752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 24900844 - 24900908
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    ||||||||||||||||||||||||||| |||||||| | ||  ||||||||||||||||||||||    
T  24900844 tttttactttctctctctattgctttggtttttgtgccaatcactcattttctttgtaaaatttt 24900908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 20998145 - 20998070
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacata 79  Q
    |||||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||| || | |||||| ||||    
T  20998145 ttttactttctctctctattgctttggtttttgtatcaatacctcattttctttgtaaatttatagttgtcccata 20998070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 16328700 - 16328599
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    ||||||||||||||| |||||| |||| |||| ||| | |||  |   ||||||||||||||| ||||||||||||  || |||||||||||||||||||    
T  16328700 tttttactttctctcactattgttttggttttcgtgccaatacatacatttctttgtaaaattatggttgtcacattaatagatgttcaaataacacaac 16328601  T
Q  103 tc 104  Q
    ||    
T  16328600 tc 16328599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14818000 - 14818076
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| ||||| |||| |||||||| |  || ||||||| |||| |||||||||||||||||||    
T  14818000 tctttttactttctctctttattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcaca 14818076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 33603264 - 33603216
Alignment:
Q  20 tattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg 68  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  33603264 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttg 33603216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 1156790 - 1156864
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||| ||||| |||||||| |  |||||||||| ||||  ||||||||| ||||||||    
T  1156790 tttttactttctctctctattactttggtttttgtgccactatctcatttcctttacaaaattttgattgtcaca 1156864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 17551379 - 17551306
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| ||||||||||| |||| |||||||||| ||  |||||||||||| | |||||||||||||||||    
T  17551379 tttttactttatctctctattgttttggtttttgtgtcaatccctcattttctttat-aaattttggttgtcaca 17551306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 2242013 - 2241952
Alignment:
Q  16 tctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||  |||||||||||||||    
T  2242013 tctctattgctttggtttttgtgtcaatgcctcattttctttgtattattttggttgtcaca 2241952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 16337923 - 16337822
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    ||||||||||||||| ||||||  ||| |||| ||||| |||  |   ||||||||||||| | ||||||||||||  || |||||||||||||||||||    
T  16337923 tttttactttctctcactattgtcttggttttcgtgtcaatacatacatttctttgtaaaaatgtggttgtcacattaatagatgttcaaataacacaac 16337824  T
Q  103 tc 104  Q
    ||    
T  16337823 tc 16337822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31077861 - 31077938
Alignment:
Q  1 tctttttacttt-ctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| || ||||||||| |||| ||||||||||  || |||| || ||||||||||||||||||||||||    
T  31077861 tctttttacttttctttctctattgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgtcaca 31077938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 6271420 - 6271477
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||  |||||||||||||    
T  6271420 tttttactttctctctctattgttttggtttttgtgtcaatatct--ttttctttgtaaa 6271477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 30457575 - 30457643
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggtt 71  Q
    |||||||||||||||| | ||| |||| |||||||||| ||| |||||||||| ||| |||||||||||    
T  30457575 tttttactttctctctttgttgttttggtttttgtgtcaatacctcattttctatgtgaaattttggtt 30457643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 552941 - 552976
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  552941 gttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 16365068 - 16364971
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||| |||||| |||| |||| ||||| |||  | |||||| ||||||||| | ||||||||||||  || |||||||||||||||||||||    
T  16365068 tactttctctcactattgttttggttttcgtgtcaatacatacatttt-tttgtaaaaatgtggttgtcacattaatagatgttcaaataacacaactc 16364971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 10335621 - 10335718
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||||||||||| ||||| |||  |||||  |||||  ||| ||||||||| |  ||||||||||  | |||| |||||||||||||||    
T  10335621 tttttactttctctctctattactttggtttccgtgtcactatctactttcctttgtaaattagtggttgtcactcaaatggttgttcaaataacaca 10335718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 16352113 - 16352060
Alignment:
Q  51 tttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||||  |||||||||||  || |||||||||||||||||||||    
T  16352113 tttctttgtaaaattgcggttgtcacattaatagatgttcaaataacacaactc 16352060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25811841 - 25811804
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  25811841 tctttttactttctctctctattgctttggtttttgtg 25811804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 33430342 - 33430289
Alignment:
Q  24 gctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||| ||||||||||  || ||||||| ||||||||||||||||||||||||    
T  33430342 gctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 33430289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 16199526 - 16199591
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| |||||||||||||||      |||||||||| ||| |||||||||||| ||||||||||||||||    
T  16199526 tttttattttctctctctattg------tttttgtgtcaatacctcattttctttataaaattttggttgtc 16199591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 8747239 - 8747274
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||||| |||||||||||||||||||||||||    
T  8747239 tttttactttatctctctattgctttgatttttgtg 8747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 30956143 - 30956218
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacata 79  Q
    ||||||||| ||||||||||| |||||| || ||| | |||||| ||||||||||||||  | |||||||| ||||    
T  30956143 ttttactttatctctctattgatttgatcttcgtgccaatatctaattttctttgtaaatctatggttgtcccata 30956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 8645380 - 8645442
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||||||||||||||||||||| || |||  || || | |||||||||| |||||    
T  8645380 ttttactttctctctctattgctttgatttatgcgtcactacctaaatttctttgtataattt 8645442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 10826573 - 10826647
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||| ||||| |||  |||||  |||||  ||||||||||||| |  |||||||||||    
T  10826573 tttttactttctctctctattactttgttttccgtgtctctatctacttttctttgtaaattagtggttgtcaca 10826647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3772424 - 3772496
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||| || ||| ||||||| |||||||||||||||  ||||| | ||||||||| | ||||||||||||    
T  3772424 tctttttaccttttctttctattgatttgatttttgtgtcactatctaaatttctttgt-atattttggttgtc 3772496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 8505773 - 8505740
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgt 37  Q
    ||||||||| ||||||||||||||||||||||||    
T  8505773 ttttactttttctctctattgctttgatttttgt 8505740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8990976 - 8991013
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  8990976 tctttttactttctctttctattgttttgatttttgtg 8991013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9015423 - 9015460
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  9015423 tctttttactttctctttctattgttttgatttttgtg 9015460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 11072242 - 11072291
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcatttt 53  Q
    ||||||||||||||| ||||| |||| |||||||||| |||||| |||||    
T  11072242 ttttactttctctctttattgttttggtttttgtgtcaatatctgatttt 11072291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 15974762 - 15974791
Alignment:
Q  75 acatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||    
T  15974762 acatatatggatgttcaaataacacaactc 15974791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 16368047 - 16367946
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    ||||||||||||||| ||||||  ||| |||||||||| |||  |   ||||||| ||||| | || |||||||||  ||  ||||||||||||||||||    
T  16368047 tttttactttctctcactattgtcttggtttttgtgtcaatacatacatttctttataaaaatgtgattgtcacattaatatatgttcaaataacacaac 16367948  T
Q  103 tc 104  Q
    ||    
T  16367947 tc 16367946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 33195318 - 33195249
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||| ||||||| ||||||| ||||||||||||||| |||  |  ||||||||| |||||| ||||||||    
T  33195318 tttattttctctttctattgttttgatttttgtgtcaatacttatttttctttgaaaaattatggttgtc 33195249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 1369429 - 1369461
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  1369429 ctttttactttatctctctattgctttgatttt 1369461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 13143384 - 13143352
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  13143384 ctttttactttatctctctattgctttgatttt 13143352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 14910258 - 14910310
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||||||||||||||||||  || || | |||||||||| |||||    
T  14910258 tctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 14910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 18141303 - 18141271
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  18141303 ctttttactttatctctctattgctttgatttt 18141271  T

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Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 28748190 - 28748218
Alignment:
Q  10 tttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||||||||||||||||    
T  28748190 tttctctctctattgctttgatttttgtg 28748218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 35589 - 35695
Alignment:
Q  1 tctttttactttctc--tctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataaca 98  Q
    |||||||||||||||  |||||||||||||| ||||||||||  || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  35589 tctttttactttctctctctctattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacatatatggatattcaaataaca 35688  T
Q  99 caactcc 105  Q
    |||||||    
T  35689 caactcc 35695  T

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Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 35646453 - 35646554
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    |||||||||||||||| |||||||||| ||||||||||  || ||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  35646453 tttttactttctctctatattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacatatatggatgtttaaataacacaac 35646552  T
Q  103 tc 104  Q
    ||    
T  35646553 tc 35646554  T

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Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1079955 - 1079852
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||||||||| ||| ||||||||||  ||||||| | ||| ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||    
T  1079955 tctttttactttctttctatattgctttggattttgtgccaatacctcattttctttgtaaaattttaattgtcacatttatgaatgttcaaataacaca 1079856  T
Q  101 actc 104  Q
    ||||    
T  1079855 actc 1079852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5168251 - 5168327
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||||||||| |||||||||    
T  5168251 tctttttactttctctctctattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcaca 5168327  T

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Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33037588 - 33037664
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||||||||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||    
T  33037588 tctttttactttttctctctattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 33037664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 1274427 - 1274540
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg-----------gttgtcacatatatggatgttc 90  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||           ||||||||||||||||||||||    
T  1274427 ctttttacttcctctctctattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggttgcataaaagttgtcacatatatggatgttc 1274526  T
Q  91 aaataacacaactc 104  Q
    ||||||||||||||    
T  1274527 aaataacacaactc 1274540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 7287190 - 7287116
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||| |||| ||||||||||  || ||||||||||||||||||||||||||||||||    
T  7287190 tttttactttctctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcaca 7287116  T

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Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26791247 - 26791171
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  26791247 tctttttactttctctctctattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcaca 26791171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 33958260 - 33958188
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||| || |||||||||    
T  33958260 tttttactttctctctctattgctttggtttttgtgtcaatatctctttttctttgtaaatttatggttgtca 33958188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36739016 - 36739092
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||||||||  || |||||||  |||||||||||||||||||||||    
T  36739016 tctttttactttctctctctattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgtcaca 36739092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41321323 - 41321399
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||| ||||||||||||||||| ||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  41321323 tctttgtactttctctctctattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcaca 41321399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 39591753 - 39591824
Alignment:
Q  6 ttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| ||| |||||| || ||||||||||||||||||| |||||||||||||    
T  39591753 ttactttctctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcaca 39591824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 39592145 - 39592216
Alignment:
Q  6 ttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| ||| |||||| || ||||||||||||||||||| |||||||||||||    
T  39592145 ttactttctctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcaca 39592216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 2972394 - 2972468
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| || |||||||| ||||||||    
T  2972394 tttttactttctctctctattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcaca 2972468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 14051316 - 14051242
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||| |||| |||||||| |  || ||||||||||||||||||||||||||||||||    
T  14051316 tttttactttctctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcaca 14051242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28306135 - 28306059
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||| |||||||||||||||||||||||| | |||||| |  || ||||||||||||||||||||||||||||||||    
T  28306135 tcttcttactttctctctctattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcaca 28306059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1671610 - 1671725
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg------------gttgtcacatatatggatgt 88  Q
    |||||||||||||||| ||||||| |||| ||||||||||  || ||||||| |||||||||||||||            ||||||||||||||||||||    
T  1671610 tctttttactttctctttctattgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgt 1671709  T
Q  89 tcaaataacacaactc 104  Q
    ||||||||||||||||    
T  1671710 tcaaataacacaactc 1671725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 7076569 - 7076495
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||| |||||||| |  ||  |||||| ||||||||||||||||||||||||    
T  7076569 tttttactttctctctctattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcaca 7076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 39054657 - 39054731
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||||||||||   |||| |||||||||||| ||||||||| || |||||    
T  39054657 tttttactttctctctctattgctttgatttttgtgcaaatatatcattttctttgcaaaattttgattatcaca 39054731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14923141 - 14923216
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcac 76  Q
    ||||||||||||||||||||||||||||| |||||||| |  || |||||||  ||||||||||||||||| ||||    
T  14923141 tctttttactttctctctctattgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcac 14923216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 27487959 - 27488021
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatttt 67  Q
    ||||||||||||||||||||||||| |||||||| | |||| | |||||||||||||||||||    
T  27487959 tttactttctctctctattgctttggtttttgtgccaatatttaattttctttgtaaaatttt 27488021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 35567571 - 35567641
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||||||||||||||||| ||||||||| | | || ||||| ||||||||||| |||||||    
T  35567571 tttttactttctctctctattgctttgaattttgtgtcaaaaccttattttatttgtaaaattatggttgt 35567641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1764292 - 1764368
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| |||||||||| ||||| || |  || ||||||| |||| |||||||||||||||||||    
T  1764292 tctttttactttctctctttattgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcaca 1764368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15479537 - 15479613
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| |||| || || |||| ||| |||||||| |||||||||||||  ||||||||    
T  15479537 tctttttactttctctctctattgttttggttattttgtcaatacctcattttttttgtaaaattttaattgtcaca 15479613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18660827 - 18660899
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||||||||||||||||||||||||||| |||||||| | |||  |||||| |||||||||| |||| ||||    
T  18660827 tctttttactttctctctctattgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt 18660899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19522006 - 19521950
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttcttt 57  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||    
T  19522006 tctttttactttctctctctattgctttgatttttgtgtcactacctcatttccttt 19521950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 21943696 - 21943625
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||| ||||||||| |||||||||||||||| |||| |||||| ||||||||||| ||||| |||||||||    
T  21943696 tttttattttctctctttattgctttgatttttctgtcaatatcttattttctttgt-aaattatggttgtca 21943625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28467456 - 28467380
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||| |||||||| |||| ||||||||||  |  ||||||| |||| |||||||||||||||||||    
T  28467456 tctttttactttctcactctattgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgtcaca 28467380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 7552966 - 7552894
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||  ||||| ||| |||||||||||||| |||  |||||||||||| ||||||||||||||||||    
T  7552966 tttttactttct--ctctactgcattgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcaca 7552894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 13309953 - 13310024
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||| | ||||| |||||||||  ||| |||||||||||||||||| |||| |||||    
T  13309953 tttttactttctctctctactactttggtttttgtgttaatacctcattttctttgtaaaaatttgattgtc 13310024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35634839 - 35634723
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttc-tttgtaaaattttggtt------------gtcacatatatggatg 87  Q
    |||||||| ||||||||||||||| |||| |||||||| | |||  |||||||| |||||||||||||||||            ||||||||||||||||    
T  35634839 tctttttagtttctctctctattgttttggtttttgtgccaataattcattttcctttgtaaaattttggttatcataaaagttgtcacatatatggatg 35634740  T
Q  88 ttcaaataacacaactc 104  Q
    |||||||||||||||||    
T  35634739 ttcaaataacacaactc 35634723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 13168592 - 13168666
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| ||| |||||| ||||| |||||||| |  |||||||||| ||||||||||||||| ||||||||    
T  13168592 tttttactttttctttctattactttggtttttgtgccactatctcatttcctttgtaaaattttgattgtcaca 13168666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 22972189 - 22972258
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||| |||| ||||||| |  ||| || ||||||||||||||||||| ||||||    
T  22972189 tttactttctctctctattgttttggtttttgtattaataccttattttctttgtaaaattttagttgtc 22972258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8686959 - 8687031
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||| | | | ||||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  8686959 tctttttactttatttttttattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgt 8687031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18258796 - 18258720
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| ||| ||||| |||| ||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  18258796 tctttttattttttctctatatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 18258720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 33037668 - 33037704
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactcc 105  Q
    |||||||||||||||||||||||||||||||||||||    
T  33037668 gttgtcacatatatggatgttcaaataacacaactcc 33037704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 33599033 - 33599104
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||| ||||||||||||||| | ||||||||| ||||||| ||||||||||||| || | |||||||    
T  33599033 tttttactttttctctctattgcttt-aattttgtgtcaatatctctttttctttgtaaatttatagttgtca 33599104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 8097329 - 8097384
Alignment:
Q  10 tttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaatt 65  Q
    ||||||||||||||||||||||||||||||| |||  || |||||||| |||||||    
T  8097329 tttctctctctattgctttgatttttgtgtcaatacttctttttctttataaaatt 8097384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 18258716 - 18258681
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  18258716 gttgtcacatatatggatgttcaaataacacaactc 18258681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 4719721 - 4719787
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttgg 69  Q
    |||||||||| ||||||||||||||||||||||||| | |||  |  ||||||||| ||||||||||    
T  4719721 tttttactttttctctctattgctttgatttttgtgccaatactttcttttctttgcaaaattttgg 4719787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 21156058 - 21156128
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||| ||||||||| |||||||||||| |||||||| | ||  || |||||||||||||||||||| ||||    
T  21156058 ttttcactttctctttctattgctttggtttttgtgccaatcacttattttctttgtaaaattttgtttgt 21156128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 34546487 - 34546540
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttcttt 57  Q
    ||||||||||| ||||||||| |||||||||| |||| ||| ||||||||||||    
T  34546487 ttttactttctatctctattgatttgatttttatgtcaatacctcattttcttt 34546540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 6596412 - 6596460
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||||||||| |||||||||  ||| |||||||||||||||||    
T  6596412 tctctctattgctttggtttttgtgttaatacctcattttctttgtaaa 6596460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 17626062 - 17626127
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| |||||||||||||||      |||||||||| ||| |||||||||||| ||||||||||||||||    
T  17626062 tttttattttctctctctattg------tttttgtgtcaatacctcattttctttataaaattttggttgtc 17626127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 19844309 - 19844240
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||  ||||||||||||| ||| |||| | ||| ||| |||||||||||||||| ||||||||    
T  19844309 tttttactttct--ctctattgctttggtttgtgtgccaatacctctttttctttgtaaaattatggttgtc 19844240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 20770201 - 20770261
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaa 62  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| || | |||||||||||||    
T  20770201 tttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaa 20770261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 36563053 - 36562997
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgt 59  Q
    ||||||||||||||||||||||||| | |||||||||| ||| || | |||||||||    
T  36563053 tttttactttctctctctattgcttaggtttttgtgtcaataccttaatttctttgt 36562997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 41699524 - 41699584
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||||||||||||||  ||||||||| ||||| |||  | |||||||||||||||    
T  41699524 tttttactttctctctctattaatttgattttcgtgtcaatacataattttctttgtaaaa 41699584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 12739847 - 12739878
Alignment:
Q  7 tactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||||||||||||||    
T  12739847 tactttctctctctattgctttgatttttgtg 12739878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 38
Target Start/End: Original strand, 12802670 - 12802701
Alignment:
Q  7 tactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||||||||||||||||||||||||    
T  12802670 tactttctctctctattgctttgatttttgtg 12802701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 13089778 - 13089719
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||| |||||||||||||||||||||||||||  || || | |||||||||| |||||    
T  13089778 tactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 13089719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 14923221 - 14923256
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||| |||||||||||||||||||||    
T  14923221 gttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 17097798 - 17097739
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||| |||||| ||||||||||||||||  || || |||||||||||| |||||    
T  17097798 tactttctctttctattactttgatttttgtgtcactacctaattttctttgtataattt 17097739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 19952070 - 19952141
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||| ||||||||| ||||||||  | ||| ||| || |||||||||||||| || ||||||||    
T  19952070 tttttactttctatctctattgttttgatttccgcgtcaatacctaattttctttgtaaatttatggttgtc 19952141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 22098326 - 22098397
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||| ||||||| |||||| | |||  |  |||||||||||||| | ||||||||    
T  22098326 tttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgtc 22098397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 29463066 - 29463101
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    |||||| |||||||||||||||||||||||||||||    
T  29463066 tttttattttctctctctattgctttgatttttgtg 29463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 104
Target Start/End: Original strand, 36739100 - 36739131
Alignment:
Q  73 tcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||    
T  36739100 tcacatatatggatgttcaaataacacaactc 36739131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 611936 - 611998
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||| |||||||||||| ||||||||||||||||||  || || | |||||||||| |||||    
T  611936 ttttattttctctctctactgctttgatttttgtgtcactacctaaatttctttgtataattt 611998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 103
Target Start/End: Original strand, 1764372 - 1764406
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaact 103  Q
    ||||||||||||||| |||||||||||||||||||    
T  1764372 gttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 41321404 - 41321438
Alignment:
Q  70 ttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||| |||||||||||||||||    
T  41321404 ttgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 16972096 - 16972063
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||| ||||||||||||||||    
T  16972096 tactttctctctctattactttgatttttgtgtc 16972063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31748405 - 31748442
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtg 38  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  31748405 tcttttcactttctctatctattgctttgatttttgtg 31748442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 39195792 - 39195821
Alignment:
Q  7 tactttctctctctattgctttgatttttg 36  Q
    ||||||||||||||||||||||||||||||    
T  39195792 tactttctctctctattgctttgatttttg 39195821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 42643211 - 42643174
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  42643211 tttttactttctctctctattgatttgttttttgtgtc 42643174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 74
Target Start/End: Original strand, 3565197 - 3565225
Alignment:
Q  46 ctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||||||||||||    
T  3565197 ctcattttctttgtaaaattttggttgtc 3565225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 8675435 - 8675403
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  8675435 ctttttactttatctctctattgctttgatttt 8675403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 10649504 - 10649536
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  10649504 ctttttactttatctctctattgctttgatttt 10649536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 20270650 - 20270698
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    ||||| ||||| |||||||| |||||| ||| |||||||||||||||||    
T  20270650 tctctttattgttttgatttatgtgtcaatacctcattttctttgtaaa 20270698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 25871447 - 25871411
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgt 39  Q
    |||||||||| |||||||||| |||||||||||||||    
T  25871447 tttttactttatctctctattcctttgatttttgtgt 25871411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 40364643 - 40364679
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgat 43  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  40364643 tactttctctctctattactttgatttttgtgccgat 40364679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 97)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12657290 - 12657391
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcga-tatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacac 99  Q
    |||||||||||||||| |||||||||||| |||||||||| | || ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||    
T  12657290 tctttttactttctctttctattgctttggtttttgtgtccactacctcatttcctttataaaattttggttgtcacatatatggatgttgaaataacac 12657389  T
Q  100 aa 101  Q
    ||    
T  12657390 aa 12657391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29359707 - 29359808
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||||||||  ||||||||| |||||||| |  ||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  29359707 tctttttactttctctct--attgctttggtttttgtgccattacatcattttctttgtaaaattttggttgtcatatatatgaatgttcaaataacaca 29359804  T
Q  101 actc 104  Q
    ||||    
T  29359805 actc 29359808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 649837 - 649913
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| ||||||||||  || ||||||| ||||||||||||||||||||||||    
T  649837 tctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 649913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3982029 - 3981953
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||||| ||||||||    
T  3982029 tctttttactttctctctctattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcaca 3981953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 35369768 - 35369844
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||||||| |||| |||||||||||||||||||    
T  35369768 tctttttactttctctctctattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgtcaca 35369844  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 6693238 - 6693328
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||| |||| ||||| |||| ||| ||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  6693238 tctctctattgttttggtttttatgtcaatacctcatttcctttgtaaaattttgattatcacatatatgaatgttcaaataacacaactc 6693328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 52576303 - 52576229
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||| |||||||| || || ||||||| ||||||||||||||||||||||||    
T  52576303 tttttactttctctctctattgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgtcaca 52576229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 41677325 - 41677224
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    |||||| ||| ||||||||||| |||| ||||||||    || |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  41677325 tttttattttatctctctattgttttggtttttgtgcaactacctcattttatttataaaattttagttgtcacatatatggatgttcaaataacacaac 41677226  T
Q  103 tc 104  Q
    ||    
T  41677225 tc 41677224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31088249 - 31088325
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||||||    
T  31088249 tctttttactttctctctctattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcaca 31088325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33100876 - 33100952
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| |||||||||||||||  || ||||||| |||| |||||||||||||||||||    
T  33100876 tctttttactttctctctctattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcaca 33100952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44519154 - 44519078
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||||||||||||||||||   ||| ||||||| |||||||||||||||||| |||||    
T  44519154 tctttttactttctctctctattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcaca 44519078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 50726251 - 50726175
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| ||||||||||||| |  || ||||||||||||| ||||||||||||||||||    
T  50726251 tctttttactttctctctctattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtcaca 50726175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3159444 - 3159547
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||| ||||||||||||||||  |||||||| |  || ||||||| |||||||||||||||||||| |||  ||| ||||||||||||| |||    
T  3159444 tctttttacttcctctctctattgcttttgtttttgtgccactacctcatttcctttgtaaaattttggttgttacagttatagatgttcaaataataca 3159543  T
Q  101 actc 104  Q
    ||||    
T  3159544 actc 3159547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 19055761 - 19055686
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||||||| |||| |||||||| | ||||||||||| |||||||||||||| |||||||||    
T  19055761 ctttttactttctctctctattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgtcaca 19055686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 27533485 - 27533414
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||| ||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  27533485 tttttactttctctctttattgttttgatttttatgtcaatacctcattttctttgtaaaattttggttgtc 27533414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 9988022 - 9988092
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||||||||||||||||||||||||| | ||  |||||||| |||||||||||||||||||    
T  9988022 tttttactttctctctctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgt 9988092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43775274 - 43775348
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||||||||||||||| |||  ||||||| || ||||||||||||||||||||||||||| ||||||    
T  43775274 tctttttactttctctctctattgttttagtttttgtatcaatatctcattttctttgtaaaattttgattgtca 43775348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 14983843 - 14983944
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacacaac 102  Q
    |||||||||||||||||||||| |||  |||||||||| ||||||| |||||||||| ||||| |||||||| || |  | | |||||||||||||||||    
T  14983843 tttttactttctctctctattgttttagtttttgtgtcaatatctctttttctttgtgaaattatggttgtcccaaaagttgttgttcaaataacacaac 14983942  T
Q  103 tc 104  Q
    ||    
T  14983943 tc 14983944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 48470708 - 48470822
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg------------gttgtcacatatatggatgtt 89  Q
    ||||||||||||||||||||||| |||| ||| |||| | ||||||||||| |||||||||||||||            |||||||||||||||||||||    
T  48470708 ctttttactttctctctctattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgtt 48470807  T
Q  90 caaataacacaactc 104  Q
    |||||||||||||||    
T  48470808 caaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23645479 - 23645555
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||||||||| |||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  23645479 tctttttactttctctctctattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 23645555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26469427 - 26469503
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| |||||||||||||||||| | ||||||||||  || ||||||| ||||||||||||||||||||||||    
T  26469427 tctttttattttctctctctattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 26469503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27465060 - 27464984
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||| |||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  27465060 tctttttactttgtctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 27464984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37619612 - 37619684
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||| |||||||||||||||| |||||||||||| | ||| ||||||| ||||||||||||||||||||    
T  37619612 tctttttaatttctctctctattgcgttgatttttgtgccaatacctcatttcctttgtaaaattttggttgt 37619684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 49065365 - 49065297
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggtt 71  Q
    ||||||||||||||||||||||||||| |||||||| | |||  |||||||||||||||||||||||||    
T  49065365 tttttactttctctctctattgctttggtttttgtgccaatacttcattttctttgtaaaattttggtt 49065297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 51571347 - 51571276
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||| |||||||||||| |||||||||| ||| ||| |||||||||||||||| ||||||||    
T  51571347 tttttactttctctttctattgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgtc 51571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 18434865 - 18434939
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||| ||||| ||||||||||||| | |||  |||||||||||| ||||||||||||||||||    
T  18434865 tttttactttctctctttattgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtcaca 18434939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 45640372 - 45640440
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttg 72  Q
    ||||| |||| ||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  45640372 tttttgctttatctctctattgctttgatttttgtgccaatatctca-tttctttgtaaaattttggttg 45640440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 50932383 - 50932444
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  50932383 tctctttctattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgt 50932444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15083053 - 15082981
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||||||||||||||||||||||||||| |||||||||| |||  |||||| |||||||||| |||| ||||    
T  15083053 tctttttactttctctctctattgctttggtttttgtgtcaatacttcatttcctttgtaaaagtttgattgt 15082981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37275036 - 37274960
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||| |||||||||||||| ||||||||||  || ||||||| ||||| ||||||||| ||||||||    
T  37275036 tctttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcaca 37274960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 8828122 - 8828051
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||||||||| |||||||| | ||| |||||||  ||| ||||||||||||||||    
T  8828122 tttttactttctctctctattgctttggtttttgtgccaatacctcatttcttttataaaattttggttgtc 8828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 9566961 - 9566890
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||||||| ||||||||||||| |||||||||| ||| |  ||||||| ||||||||||||||||||    
T  9566961 tttttactttctcactctattgctttggtttttgtgtcaataccctattttctatgtaaaattttggttgtc 9566890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 30467531 - 30467460
Alignment:
Q  6 ttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||| |||||||||||||||||||| |||||| || |||| |||||||||||||| ||| |||||||||    
T  30467531 ttactttttctctctattgctttgatttgtgtgtcaatctctcgttttctttgtaaaactttagttgtcaca 30467460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 45333784 - 45333855
Alignment:
Q  6 ttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||| |||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||||    
T  45333784 ttactttctctctttattgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcaca 45333855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 50149016 - 50149086
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||| |||||||||||||| |||||||||| ||   |||||||||||||||||||||| ||||    
T  50149016 tttttactttctttctctattgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgt 50149086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 50775157 - 50775083
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||| |||||||||||||||| |||||||||| | |  || |||||||||||||||| |||||||||||    
T  50775157 tttttactttatctctctattgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgtcaca 50775083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44914575 - 44914502
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||| |||||||||||||||||||  ||||||||||  || ||||||| ||||||||||||||| |||||    
T  44914575 tctttttattttctctctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgtc 44914502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 2571705 - 2571780
Alignment:
Q  4 ttttactttctctctctattgctttg-atttttgtgtcgatatctcattttctttgt-aaaattttggttgtcaca 77  Q
    ||||||||| ||||||||||| |||| |||||||||||  || |||||||||||||| ||||||||||||||||||    
T  2571705 ttttactttttctctctattgttttgtatttttgtgtcactacctcattttctttgttaaaattttggttgtcaca 2571780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 18512344 - 18512273
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| |||||||||||||||  ||||| |||| ||| |||||||||||| ||||||||| ||||||    
T  18512344 tttttactttatctctctattgctttagtttttatgtcaatacctcattttctttataaaattttagttgtc 18512273  T

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Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 26021077 - 26021006
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||| | ||||||||| ||||||| ||||||| ||||||| |||| |||||||||||||| |||||    
T  26021077 tttttactttatatctctattgatttgattattgtgtcaatatctctttttttttgtaaaattttgattgtc 26021006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 31827032 - 31827091
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||||||||| |||| |||||||||| ||| |||||||| |||||||||||||||||||    
T  31827032 tctctctattgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgt 31827091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 48858895 - 48858957
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||| ||||||||||||||||||||||||||||  ||||| | |||||||||| |||||    
T  48858895 ttttacttcctctctctattgctttgatttttgtgtcactatctaaatttctttgtataattt 48858957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37685399 - 37685473
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||  |||||||||||||||||||||||  || |||||||  |||||||||||||  ||||||||    
T  37685399 tctttttactttctc--tctattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcaca 37685473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37700119 - 37700045
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||||||  ||||||||||||||||||||  || |||||||  |||||||||||||  ||||||||    
T  37700119 tctttttactttctctct--attgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcaca 37700045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 45121472 - 45121408
Alignment:
Q  12 tctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  45121472 tctctctctattgctttggtttttgtgccacta-ctcatttcctttgtaaaattttggttgtcaca 45121408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37985389 - 37985317
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||||| ||||||||||| ||||||||| |  || ||||||| |||| ||||||||| |||||    
T  37985389 tctttttactttctctttctattgctttaatttttgtgacactacctcatttcctttataaaattttagttgt 37985317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 48261210 - 48261270
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    ||||||||||||||||||||||||||| |||||||| | ||| ||| ||| ||||||||||    
T  48261210 tttttactttctctctctattgctttggtttttgtgccaatacctcttttcctttgtaaaa 48261270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 8350122 - 8350087
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  8350122 gttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 10627811 - 10627740
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||| ||||| ||||||||||| |||||||||||| || ||| | |||||||||| |||||||||| |||||    
T  10627811 ttttcactttatctctctattgttttgatttttgtatcaataccacattttctttataaaattttgtttgtc 10627740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 26469507 - 26469542
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  26469507 gttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 31088329 - 31088364
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  31088329 gttgtcacatatatggatgttcaaataacacaactc 31088364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 33076190 - 33076261
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| |||||||||||||| ||||||| |||||| | |||  | ||||||||||||||||| ||||||||    
T  33076190 tttttattttctctctctattactttgatatttgtgccaatacataattttctttgtaaaattgtggttgtc 33076261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 105
Target Start/End: Complemental strand, 44914493 - 44914458
Alignment:
Q  70 ttgtcacatatatggatgttcaaataacacaactcc 105  Q
    ||||||||||||||||||||||||||||||||||||    
T  44914493 ttgtcacatatatggatgttcaaataacacaactcc 44914458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 45121404 - 45121369
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  45121404 gttgtcacatatatggatgttcaaataacacaactc 45121369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 48983664 - 48983605
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||| ||||||||||||||||||||| |  ||||| | ||||||||||||||||    
T  48983664 tactttctctttctattgctttgatttttgtgccattatctaaatttctttgtaaaattt 48983605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3851226 - 3851300
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||  ||||||||||| |||| ||||| ||||  || ||||||| |||| |||||||||||||||||    
T  3851226 tctttttacttgatctctctattgttttggtttttctgtcactacctcatttcctttataaaattttggttgtca 3851300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 4466765 - 4466835
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    |||||||||||||| | ||||||||||||||||||||| ||| |   ||| |||||||||||| |||||||    
T  4466765 tttttactttctctttttattgctttgatttttgtgtcaataccatttttcctttgtaaaattatggttgt 4466835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4776824 - 4776889
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    |||||||||||| |||||||||| |||||||||||||| |  || ||||||| |||| ||||||||    
T  4776824 tctttttactttatctctctattactttgatttttgtgccactacctcatttcctttataaaattt 4776889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 21401491 - 21401581
Alignment:
Q  26 tttgatttttgtgtcgatatctcattttctttgtaaaattttg------------gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||| |||||||||| ||| |||||||||||||||||||||||            ||||||||||| ||||||||||||||||||||||||    
T  21401491 tttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactc 21401581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 29877370 - 29877439
Alignment:
Q  5 tttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||||||| |||| |||| ||||| |||  | ||||||||||||||| | ||||||||    
T  29877370 tttactttctctctctattgttttggttttcgtgtcaatacataattttctttgtaaaaatatggttgtc 29877439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 41070893 - 41070950
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgta 60  Q
    |||||||||||||| |||||||||||||||||| |||| ||| || | ||||||||||    
T  41070893 tttttactttctctatctattgctttgatttttatgtcaatacctaaatttctttgta 41070950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 8846044 - 8846104
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaa 63  Q
    |||||||||| ||| |||||||||||| |||||||||| |||  || ||||||||||||||    
T  8846044 tttttactttttctttctattgctttggtttttgtgtcaatacatctttttctttgtaaaa 8846104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 18336216 - 18336276
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaa 62  Q
    |||||||||| |||||||||||||||||||||||||  |||| || | |||||||||||||    
T  18336216 tttttactttatctctctattgctttgatttttgtgcagatacctaccttttctttgtaaa 18336276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 19947734 - 19947674
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||||||||||||| |||||||  | ||| ||| |||||||| ||||||||||||||||    
T  19947734 tctctctattgctttggtttttgtcccaatacctccttttctttataaaattttggttgtc 19947674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 23665726 - 23665654
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||||||||||| ||||||||| |||||||||| | |  |  |||||||||||||| | |||||||||    
T  23665726 tttttactttctctctcaattgctttggtttttgtgtcaacacatacttttctttgtaaaaatatggttgtca 23665654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 34818045 - 34817973
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    |||||||||||||| ||||||||||||||||||||| | | |  |  |||||||||||||| | |||||||||    
T  34818045 tttttactttctctttctattgctttgatttttgtgccaacacatatttttctttgtaaaaatatggttgtca 34817973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 35136913 - 35136949
Alignment:
Q  2 ctttttactttctctctctattgctttgatttttgtg 38  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35136913 ctttttactttatctctctattgctttgatttttgtg 35136949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 47642604 - 47642544
Alignment:
Q  6 ttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||| ||||||||||| |||||||||||  ||||| | |||||||||| |||||    
T  47642604 ttactttctctttctattgctttaatttttgtgtcactatctaaatttctttgtataattt 47642544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 51080091 - 51080055
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgt 39  Q
    ||||||||||||||||||||||||||| |||||||||    
T  51080091 tttttactttctctctctattgctttggtttttgtgt 51080055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51718629 - 51718553
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||| |||||||||||||  |||||||||||||||  ||  |||||| ||||||||| |||| ||| |||||    
T  51718629 tctttttaccttctctctctattattttgatttttgtgtcactacttcatttcctttgtaaagttttagttatcaca 51718553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 649917 - 649952
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||| |||||||||||||||||||||||    
T  649917 gttgtcacatatgtggatgttcaaataacacaactc 649952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 3981949 - 3981914
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||| |||||||||||||||||||||||||    
T  3981949 gttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 30570605 - 30570664
Alignment:
Q  14 tctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||||||||| |||||||||||||   |||||||  |||||||||||||||||| ||||    
T  30570605 tctctctattgttttgatttttgtgctaatatctcgatttctttgtaaaattttgattgt 30570664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 33070673 - 33070768
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataaca 98  Q
    ||||||||||||||||||||| |||||||||  |||||  |||||  ||| ||||||||| |  ||||||||||  | |||  |||||||||||||    
T  33070673 tttttactttctctctctattactttgatttccgtgtcactatctactttcctttgtaaattagtggttgtcactcaaatgattgttcaaataaca 33070768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 33100956 - 33100991
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||| ||||||||||||||||||||    
T  33100956 gttgtcacatatatgaatgttcaaataacacaactc 33100991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 100
Target Start/End: Original strand, 35369848 - 35369879
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacaca 100  Q
    ||||||||||||||||||||||||||||||||    
T  35369848 gttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 37619692 - 37619727
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||||||||||||||||||| |||||    
T  37619692 gttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 39849154 - 39849095
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaa 62  Q
    |||||||||| |||| |||||| |||| |||||||||| || ||||||||||||| ||||    
T  39849154 tttttactttttctcactattgttttgttttttgtgtcaatgtctcattttctttataaa 39849095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Complemental strand, 44519074 - 44519039
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    ||||||||||||||| ||||||||||||||||||||    
T  44519074 gttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 45640449 - 45640484
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||| |||||||||||||||||||||    
T  45640449 gttgtcacatatatagatgttcaaataacacaactc 45640484  T

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Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 49570067 - 49570102
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtg 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  49570067 tttttactttctctctctattgttttgatttttgtg 49570102  T

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Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 51436658 - 51436615
Alignment:
Q  25 ctttgatttttgtgtcgatatctcattttctttgtaaaattttg 68  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||    
T  51436658 ctttgatttttgtgtcaatatctcgttttctttgtaaaactttg 51436615  T

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Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 740956 - 740859
Alignment:
Q  3 tttttactttctct--ctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataaca 98  Q
    ||||||||||||||  |||||||  |||| |||||||||  |||  | ||||||||||||||||| |||||||||   | || |||||||||||||||    
T  740956 tttttactttctctctctctattattttggtttttgtgttaatacataattttctttgtaaaattatggttgtcaatcaaattgatgttcaaataaca 740859  T

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Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 2269573 - 2269503
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgt 73  Q
    ||||||||||||| ||  ||||||||| |||||||||| ||| || |||||||   |||||||||||||||    
T  2269573 tttttactttctcacttgattgctttggtttttgtgtcaataccttattttctaaataaaattttggttgt 2269503  T

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Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 30745058 - 30745128
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||| ||||||||||| |||| |||||||||| |||  | ||||||||||||| | | ||||||||    
T  30745058 ttttactttatctctctattgttttggtttttgtgtcaatacataattttctttgtaagagtatggttgtc 30745128  T

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Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 30766509 - 30766579
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    ||||||||| ||||||||||| |||| |||||||||| |||  | ||||||||||||| | | ||||||||    
T  30766509 ttttactttatctctctattgttttggtttttgtgtcaatacataattttctttgtaagagtatggttgtc 30766579  T

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Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 3851306 - 3851335
Alignment:
Q  69 gttgtcacatatatggatgttcaaataaca 98  Q
    ||||||||||||||||||||||||||||||    
T  3851306 gttgtcacatatatggatgttcaaataaca 3851335  T

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Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 25509180 - 25509123
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgta 60  Q
    |||||| ||||| | ||||||| |||| |||||||||| ||| |||||||||||||||    
T  25509180 tttttattttctttttctattgttttggtttttgtgtcaatacctcattttctttgta 25509123  T

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Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 25672412 - 25672477
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttg 68  Q
    |||||| ||||||| |||||| ||||  |||||||||| |||  | ||||||||||||||||||||    
T  25672412 tttttattttctctttctattactttagtttttgtgtcaatactttattttctttgtaaaattttg 25672477  T

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Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 47721479 - 47721516
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  47721479 tttttactttatctctctattgctttgattttcgtgtc 47721516  T

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Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 47728471 - 47728508
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  47728471 tttttactttatctctctattgctttgattttcgtgtc 47728508  T

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Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 49647150 - 49647101
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcatttt 53  Q
    ||||||||||||||||||||| |||| |||||||||| ||| ||| ||||    
T  49647150 ttttactttctctctctattgttttggtttttgtgtcaataactcgtttt 49647101  T

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Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 50932452 - 50932481
Alignment:
Q  69 gttgtcacatatatggatgttcaaataaca 98  Q
    ||||||||||||||||||||||||||||||    
T  50932452 gttgtcacatatatggatgttcaaataaca 50932481  T

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Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 6340796 - 6340868
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatct-cattttctttgtaaaattttggttgtca 75  Q
    ||||||||| |||||| |||||||||||||| ||||| ||||||   |||||||| ||||| | |||||||||    
T  6340796 ttttactttatctctcaattgctttgattttcgtgtcaatatctattttttctttataaaactatggttgtca 6340868  T

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Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 10890048 - 10890016
Alignment:
Q  2 ctttttactttctctctctattgctttgatttt 34  Q
    ||||||||||| |||||||||||||||||||||    
T  10890048 ctttttactttatctctctattgctttgatttt 10890016  T

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Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 11597707 - 11597783
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacata 79  Q
    |||||||||||||||||||||| |||| |||| |||   ||||||  |||||||||||||  | |||||||| ||||    
T  11597707 tttttactttctctctctattgttttggttttcgtgctaatatctacttttctttgtaaatctatggttgtcccata 11597783  T

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Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 51137625 - 51137573
Alignment:
Q  30 atttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatat 82  Q
    |||||| |||| |||||||||| |||||||||||||||| || ||||| ||||    
T  51137625 atttttatgtcaatatctcattctctttgtaaaattttgtttatcacaaatat 51137573  T

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Target: scaffold0041 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 10966 - 10867
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacaca 100  Q
    |||||||||||||||||||||||  ||||||||||||||   || |||||||||||| |||||||||| |||||||||||| ||||||| ||||||||||    
T  10966 tctttttactttctctctctattattttgatttttgtgttactacctcattttctttataaaattttgattgtcacatataaggatgtttaaataacaca 10867  T

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Target: scaffold0519 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11850 - 11926
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  11850 tctttttattttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcaca 11926  T

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Target: scaffold0056 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 76622 - 76546
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    |||||| |||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||||||||||||    
T  76622 tcttttcactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcaca 76546  T

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Target: scaffold0199 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8736 - 8810
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtca 75  Q
    ||||||||| |||||||||| |||||||| ||||||||||  || ||||||| ||||||||||||||||||||||    
T  8736 tctttttacgttctctctctgttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtca 8810  T

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Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49363 - 49439
Alignment:
Q  1 tctttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcaca 77  Q
    ||||||||||||||| |||||||  |||| ||||||||||  || ||||||| |||||||||||||||||| |||||    
T  49363 tctttttactttctcactctattattttggtttttgtgtcactacctcatttcctttgtaaaattttggttatcaca 49439  T

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Target: scaffold0098; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 49443 - 49478
Alignment:
Q  69 gttgtcacatatatggatgttcaaataacacaactc 104  Q
    |||||||||||||||||||||||||||||| |||||    
T  49443 gttgtcacatatatggatgttcaaataacataactc 49478  T

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Target: scaffold0087 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 53362 - 53291
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| ||||||||||| ||| |||  |||||||||| |||||||||||||||| |||| |||||||||||    
T  53362 tttttattttctctctcttttgttttagtttttgtgtcaatatctcattttctttataaatttttggttgtc 53291  T

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Target: scaffold0087; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 24539 - 24468
Alignment:
Q  3 tttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtc 74  Q
    |||||| |||||||||||| |||||||  ||||||||| |||||||||||| ||| |||| ||||| |||||    
T  24539 tttttattttctctctctactgctttggattttgtgtcaatatctcattttttttataaacttttgattgtc 24468  T

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Target: scaffold0343 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 8911 - 8980
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcat-tttctttgtaaaattttggttgtc 74  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||| | ||||||||||||    
T  8911 ttttactttctctctctattgctatgatttttgtgtcaata-ctcatatttctttgt-atattttggttgtc 8980  T

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Target: scaffold0276 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 1716 - 1778
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattt 66  Q
    ||||||||||||||| ||||||||||||||||||| |  ||||| | |||||||||| |||||    
T  1716 ttttactttctctctttattgctttgatttttgtgccactatctaaatttctttgtataattt 1778  T

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Target: scaffold0618 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 8949 - 8916
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||||||||||||||||||||    
T  8949 tactttctctctctattgctttgatttttgtgtc 8916  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 94881 - 94786
Alignment:
Q  4 ttttactttctctctctattgctttgatttttgtgtcgatatctcattttctttgtaaaattttggttgtcacatatatggatgttcaaataacac 99  Q
    |||||||||||||||||||| ||||||||||||||   |||  |  |||||||||||||| | | ||||||  | | ||| |||||||||||||||    
T  94881 ttttactttctctctctattactttgatttttgtgctaatacatatttttctttgtaaaaatatagttgtccaacaaatgaatgttcaaataacac 94786  T

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Target: scaffold0432 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 6516 - 6483
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    ||||||||||||||||| ||||||||||||||||    
T  6516 tactttctctctctattactttgatttttgtgtc 6483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 8547 - 8580
Alignment:
Q  7 tactttctctctctattgctttgatttttgtgtc 40  Q
    |||||||||| |||||||||||||||||||||||    
T  8547 tactttctctttctattgctttgatttttgtgtc 8580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 20902 - 20870
Alignment:
Q  3 tttttactttctctctctattgctttgattttt 35  Q
    |||||||||||||| ||||||||||||||||||    
T  20902 tttttactttctctttctattgctttgattttt 20870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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