View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3857_high_24 (Length: 384)

Name: NF3857_high_24
Description: NF3857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3857_high_24
NF3857_high_24
[»] chr2 (43 HSPs)
chr2 (5-305)||(15245705-15246005)
chr2 (5-91)||(34119598-34119684)
chr2 (1-75)||(17395018-17395092)
chr2 (1-83)||(29361067-29361149)
chr2 (1-86)||(2221037-2221122)
chr2 (5-86)||(15269905-15269986)
chr2 (5-86)||(25881588-25881669)
chr2 (5-86)||(40937010-40937091)
chr2 (1-86)||(44711931-44712016)
chr2 (5-86)||(5054652-5054733)
chr2 (5-86)||(39449064-39449144)
chr2 (1-86)||(39449311-39449396)
chr2 (4-86)||(18723638-18723720)
chr2 (1-86)||(2563748-2563833)
chr2 (1-86)||(6999010-6999095)
chr2 (5-86)||(36103082-36103163)
chr2 (1-86)||(36212002-36212086)
chr2 (9-86)||(42678793-42678870)
chr2 (4-86)||(26206891-26206974)
chr2 (8-86)||(7574479-7574557)
chr2 (5-86)||(22525942-22526021)
chr2 (5-86)||(23352853-23352932)
chr2 (5-83)||(35589333-35589411)
chr2 (1-86)||(2841878-2841963)
chr2 (5-86)||(9377500-9377581)
chr2 (5-86)||(9634382-9634463)
chr2 (5-86)||(42866794-42866875)
chr2 (1-81)||(4061904-4061983)
chr2 (26-86)||(38560722-38560782)
chr2 (26-86)||(43513456-43513516)
chr2 (178-217)||(15260858-15260897)
chr2 (8-86)||(11091308-11091386)
chr2 (5-83)||(11384961-11385038)
chr2 (1-59)||(18876863-18876921)
chr2 (5-83)||(35705541-35705618)
chr2 (56-89)||(1352429-1352462)
chr2 (1-58)||(24562959-24563016)
chr2 (5-86)||(32869870-32869951)
chr2 (5-86)||(39213716-39213797)
chr2 (26-86)||(40700239-40700300)
chr2 (30-86)||(4758610-4758666)
chr2 (177-217)||(15273614-15273654)
chr2 (5-86)||(44254643-44254726)
[»] chr1 (50 HSPs)
chr1 (1-86)||(51466812-51466896)
chr1 (5-86)||(21093304-21093385)
chr1 (1-86)||(52362526-52362611)
chr1 (1-86)||(15705004-15705089)
chr1 (5-86)||(32915018-32915099)
chr1 (1-86)||(36577354-36577439)
chr1 (1-86)||(45417816-45417901)
chr1 (1-86)||(50433813-50433898)
chr1 (1-85)||(48624921-48625005)
chr1 (1-83)||(40316886-40316968)
chr1 (5-86)||(41507140-41507222)
chr1 (5-86)||(48326011-48326093)
chr1 (9-86)||(4608196-4608273)
chr1 (5-86)||(5485940-5486021)
chr1 (1-77)||(10627753-10627829)
chr1 (5-86)||(10889992-10890073)
chr1 (5-86)||(13489706-13489787)
chr1 (5-86)||(15015442-15015523)
chr1 (5-86)||(44789090-44789170)
chr1 (5-86)||(47721453-47721534)
chr1 (5-86)||(47728445-47728526)
chr1 (5-86)||(48220090-48220171)
chr1 (5-86)||(50328087-50328168)
chr1 (1-86)||(50781512-50781597)
chr1 (18-86)||(52437538-52437607)
chr1 (26-86)||(37588642-37588702)
chr1 (10-86)||(49241456-49241532)
chr1 (1-79)||(33125267-33125345)
chr1 (5-86)||(33358104-33358186)
chr1 (5-83)||(50824788-50824866)
chr1 (5-86)||(8200119-8200200)
chr1 (1-86)||(26967254-26967338)
chr1 (1-86)||(38713614-38713699)
chr1 (5-86)||(46911337-46911417)
chr1 (34-86)||(8411693-8411745)
chr1 (26-86)||(34040467-34040527)
chr1 (39-86)||(38303668-38303715)
chr1 (1-75)||(6340780-6340854)
chr1 (29-86)||(9987995-9988053)
chr1 (29-86)||(41677294-41677352)
chr1 (1-83)||(44294062-44294144)
chr1 (56-86)||(47279701-47279731)
chr1 (5-86)||(6143727-6143808)
chr1 (10-59)||(7275618-7275667)
chr1 (1-86)||(21486260-21486344)
chr1 (5-86)||(30658795-30658875)
chr1 (5-86)||(35136888-35136969)
chr1 (26-86)||(47820467-47820528)
chr1 (1-65)||(25259148-25259212)
chr1 (1-93)||(43769655-43769747)
[»] chr4 (34 HSPs)
chr4 (5-85)||(51573578-51573658)
chr4 (5-86)||(28458323-28458404)
chr4 (4-86)||(21617227-21617309)
chr4 (5-86)||(13086066-13086147)
chr4 (5-86)||(18882921-18883002)
chr4 (1-86)||(38338864-38338949)
chr4 (5-86)||(43769755-43769836)
chr4 (1-59)||(9362621-9362679)
chr4 (5-86)||(13139192-13139273)
chr4 (5-86)||(22819693-22819774)
chr4 (1-86)||(39312558-39312643)
chr4 (5-86)||(46405920-46406001)
chr4 (5-86)||(51887707-51887788)
chr4 (10-83)||(31559585-31559659)
chr4 (1-59)||(42667276-42667334)
chr4 (4-86)||(49768263-49768345)
chr4 (5-75)||(49896612-49896682)
chr4 (1-59)||(53647367-53647425)
chr4 (5-86)||(14593872-14593952)
chr4 (5-86)||(33860691-33860771)
chr4 (5-74)||(56271416-56271485)
chr4 (5-64)||(21172346-21172405)
chr4 (1-60)||(54802618-54802677)
chr4 (5-79)||(2999163-2999237)
chr4 (29-86)||(5932733-5932791)
chr4 (5-86)||(4949550-4949630)
chr4 (1-86)||(14010060-14010145)
chr4 (5-86)||(32696225-32696306)
chr4 (5-86)||(37514078-37514159)
chr4 (5-86)||(42815448-42815529)
chr4 (10-86)||(47288126-47288203)
chr4 (15-86)||(5249912-5249984)
chr4 (26-86)||(13263364-13263424)
chr4 (26-86)||(51194313-51194373)
[»] chr5 (27 HSPs)
chr5 (5-87)||(21136306-21136388)
chr5 (5-86)||(9581623-9581704)
chr5 (5-86)||(20770175-20770256)
chr5 (1-83)||(32912085-32912167)
chr5 (1-86)||(3640139-3640224)
chr5 (5-86)||(1839291-1839372)
chr5 (5-86)||(6292165-6292246)
chr5 (5-86)||(9226345-9226425)
chr5 (5-86)||(10649479-10649560)
chr5 (1-86)||(30640834-30640919)
chr5 (1-86)||(34888751-34888835)
chr5 (5-86)||(41175652-41175733)
chr5 (5-83)||(8675379-8675457)
chr5 (1-86)||(189645-189730)
chr5 (5-62)||(4098679-4098736)
chr5 (1-86)||(4771541-4771626)
chr5 (5-86)||(15952991-15953072)
chr5 (5-86)||(19481128-19481209)
chr5 (5-83)||(15478705-15478783)
chr5 (5-83)||(34124668-34124746)
chr5 (5-75)||(38704143-38704213)
chr5 (4-86)||(43196570-43196652)
chr5 (1-75)||(43214001-43214075)
chr5 (29-86)||(7287159-7287217)
chr5 (29-86)||(13089751-13089809)
chr5 (5-83)||(34270374-34270452)
chr5 (17-86)||(6931017-6931086)
[»] scaffold0532 (1 HSPs)
scaffold0532 (5-86)||(11008-11089)
[»] chr7 (32 HSPs)
chr7 (1-86)||(46532546-46532631)
chr7 (5-83)||(31844551-31844629)
chr7 (1-86)||(41458640-41458725)
chr7 (1-75)||(4225807-4225881)
chr7 (1-86)||(3293173-3293258)
chr7 (1-86)||(35452515-35452600)
chr7 (5-86)||(43482568-43482648)
chr7 (1-83)||(1504303-1504385)
chr7 (2-83)||(18505820-18505902)
chr7 (4-86)||(21559842-21559924)
chr7 (1-83)||(33180652-33180734)
chr7 (5-86)||(7817681-7817761)
chr7 (5-86)||(11564937-11565017)
chr7 (5-82)||(21822545-21822622)
chr7 (5-86)||(28036788-28036869)
chr7 (5-86)||(41399109-41399190)
chr7 (5-75)||(10055578-10055648)
chr7 (9-75)||(40231656-40231722)
chr7 (5-86)||(3062374-3062455)
chr7 (1-58)||(8920609-8920666)
chr7 (5-66)||(35588837-35588898)
chr7 (5-86)||(41893959-41894040)
chr7 (1-86)||(43573485-43573570)
chr7 (1-83)||(3343272-3343354)
chr7 (9-83)||(41396965-41397039)
chr7 (5-59)||(42926210-42926264)
chr7 (4-66)||(46812850-46812912)
chr7 (5-86)||(12634379-12634460)
chr7 (5-66)||(12645856-12645917)
chr7 (26-86)||(42584846-42584907)
chr7 (5-86)||(46829523-46829604)
chr7 (30-82)||(47495018-47495070)
[»] chr6 (23 HSPs)
chr6 (4-86)||(28944924-28945006)
chr6 (1-86)||(2689007-2689091)
chr6 (1-86)||(5028208-5028293)
chr6 (5-86)||(13143328-13143409)
chr6 (5-86)||(14693198-14693279)
chr6 (5-86)||(14699610-14699691)
chr6 (5-86)||(33421804-33421884)
chr6 (5-86)||(34037023-34037103)
chr6 (5-86)||(35213507-35213588)
chr6 (1-84)||(24842414-24842496)
chr6 (5-86)||(6531126-6531210)
chr6 (5-86)||(754384-754465)
chr6 (5-86)||(868898-868979)
chr6 (5-86)||(18141247-18141328)
chr6 (6-83)||(26832693-26832770)
chr6 (5-59)||(1369431-1369485)
chr6 (26-75)||(30945868-30945918)
chr6 (13-59)||(31413596-31413642)
chr6 (5-59)||(31749436-31749490)
chr6 (5-86)||(32459462-32459544)
chr6 (5-86)||(13658876-13658956)
chr6 (1-82)||(32046746-32046827)
chr6 (5-89)||(9050174-9050258)
[»] chr8 (23 HSPs)
chr8 (5-86)||(37597282-37597363)
chr8 (5-85)||(36885434-36885513)
chr8 (1-86)||(2733032-2733116)
chr8 (1-86)||(4994425-4994510)
chr8 (9-86)||(12707193-12707270)
chr8 (5-86)||(16872102-16872183)
chr8 (5-86)||(29991456-29991536)
chr8 (5-86)||(30439452-30439533)
chr8 (1-86)||(42569671-42569756)
chr8 (5-83)||(5277650-5277728)
chr8 (1-59)||(12783836-12783894)
chr8 (1-86)||(28646715-28646801)
chr8 (1-86)||(28651299-28651385)
chr8 (2-75)||(9208121-9208192)
chr8 (1-86)||(29440465-29440549)
chr8 (5-86)||(31596992-31597073)
chr8 (9-86)||(34490108-34490184)
chr8 (19-86)||(8671515-8671583)
chr8 (3-86)||(24798302-24798385)
chr8 (1-86)||(888199-888284)
chr8 (26-83)||(36110185-36110242)
chr8 (5-86)||(36531639-36531719)
chr8 (14-75)||(41701217-41701278)
[»] chr3 (33 HSPs)
chr3 (1-86)||(20080117-20080201)
chr3 (1-86)||(49761351-49761436)
chr3 (5-86)||(24095352-24095433)
chr3 (1-86)||(37927147-37927232)
chr3 (5-83)||(18741164-18741241)
chr3 (5-86)||(24482909-24482990)
chr3 (1-86)||(29097496-29097581)
chr3 (5-86)||(31376712-31376792)
chr3 (5-86)||(50206916-50206997)
chr3 (1-86)||(55400043-55400128)
chr3 (5-85)||(51465860-51465940)
chr3 (16-83)||(42683874-42683941)
chr3 (5-83)||(1280075-1280152)
chr3 (1-83)||(8846538-8846620)
chr3 (5-86)||(3281662-3281743)
chr3 (5-86)||(11234235-11234316)
chr3 (5-86)||(21196168-21196249)
chr3 (5-86)||(24645400-24645481)
chr3 (5-82)||(26672447-26672523)
chr3 (1-86)||(34057895-34057980)
chr3 (5-86)||(45055018-45055098)
chr3 (5-59)||(9158819-9158873)
chr3 (5-71)||(24480397-24480463)
chr3 (5-83)||(32759846-32759923)
chr3 (5-59)||(33795671-33795725)
chr3 (1-86)||(49167794-49167879)
chr3 (1-75)||(50638293-50638367)
chr3 (4-86)||(54694058-54694140)
chr3 (1-86)||(3953417-3953502)
chr3 (29-86)||(19150289-19150346)
chr3 (26-86)||(34662050-34662111)
chr3 (5-86)||(46852078-46852159)
chr3 (26-86)||(52485516-52485577)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-65)||(71989-72053)
[»] scaffold0856 (1 HSPs)
scaffold0856 (4-86)||(1976-2056)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-86)||(223426-223506)
[»] scaffold0471 (1 HSPs)
scaffold0471 (26-83)||(54-111)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-86)||(41799-41884)


Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 15245705 - 15246005
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagttttcgttagaaaattacca 104  Q
    ||||||||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15245705 aaagaaaaagtagatatttatacgaaaattaaagtaatagatagataaactaaaatataatgcgagtatgaaagagaaagttttcattagaaaattacca 15245804  T
Q  105 tgtataccaaataaactaaaacataataggagtagatgtttaaatatatcatttctctatgaaaaaggttctttttgaacatgcttttgtttgtaagaaa 204  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15245805 tgtataccaaataaactaaaacataatgggagtagatgtttaaatatatcatttctctatgaaaaaggttctttttgaacatgcttttgtttgtaagaaa 15245904  T
Q  205 ctaagattagatgttttataacttaatcatctcatctatctggaaacttggcagtatgaaggatgaaaatagtctattagaaagttaccattgctgctcg 304  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15245905 ctaagatgagatgttttataacttaatcatctcatctatctggaaacttggcaatatgaaggatgaaaatagtctattagaaagttaccattgctgctcg 15246004  T
Q  305 c 305  Q
    |    
T  15246005 c 15246005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 34119598 - 34119684
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagttttcgt 91  Q
    |||||||||||| ||||| | |||||||||||||||||||| ||||||| ||||| |||||| |||||||| |||||||||| ||||    
T  34119598 aaagaaaaagtaagtattcacacgaaaatcaaaacaatagagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcgt 34119684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17395018 - 17395092
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    |||||||||||| ||||||||| | |||||||||||||||||||| ||||||| |||||||| ||| ||||||||    
T  17395018 ttataaagaaaacgtaggtattgacacgaaaatcaaaacaatagaaagataaagtaaaatatcatgtgagtatga 17395092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29361149 - 29361067
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||| ||||||| |||||  | ||| ||||||||||||||||    
T  29361149 ttataaagaaaaagtaggtatttgtacaaaaatcaaagcaatagagagataaagtaaaaatttatgtgagtatgaaagagaaa 29361067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2221122 - 2221037
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||  ||| |||||||| ||||||| ||||||| | ||| |||||| |||||||| ||||||||||    
T  2221122 ttataaagaaaaagtaggtatttgcacggaaatcaaagcaatagagagataaagtgaaaaataatgtgagtatgagagagaaagtt 2221037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 15269986 - 15269905
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||| |||||  ||||| || ||||||||||||||||    
T  15269986 aaagaaaaagtaggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgaatatgaaagagaaagtt 15269905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 25881669 - 25881588
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| |||||||||||||||||| |||| ||| ||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  25881669 aaagaaaaaataggtatttatacgaaaaccaaagcaacagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 25881588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 40937010 - 40937091
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  40937010 aaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 40937091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44711931 - 44712016
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | |||||||||  |||||||||||| ||||||| ||||||| ||||| ||| || |||||||||||||||||||    
T  44711931 ttataaagaaagaataggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaatagtgtgagtatgaaagagaaagtt 44712016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 5054733 - 5054652
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||| ||| | |||||| |||||||| ||| ||||||    
T  5054733 aaagaaaaagtaggtatttgcacgaaaatcaaagcaatagagagataaagtaacacataatgtgagtatgagagaaaaagtt 5054652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 39449064 - 39449144
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||   |||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||||||||    
T  39449064 aaagaaaaaataggtattgc-acgaaaatcaaaacaatagagagataaagtaaaaaatgatgtgagtatgaaagagaaagtt 39449144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 39449396 - 39449311
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| |||||||  |||||||||||| ||||||| ||||||| |||||  ||||  |||||||| ||||||||||    
T  39449396 ttataaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatctgagtatgagagagaaagtt 39449311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 18723720 - 18723638
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| | |||||||||  |||||||||||| ||||| | ||||||| ||||| |||||| |||||||| ||||||||||    
T  18723720 taaagaaagaataggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaaataatgtgagtatgagagagaaagtt 18723638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2563833 - 2563748
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| |||||||  ||||||| |||||||||||| ||||||| |||||   ||||  ||||||| ||||||||||    
T  2563833 ttataaagaaaaagttggtatttgcacgaaaaccaaaacaatagaaagataaagtaaaaagaaatgtaagtatgagagagaaagtt 2563748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6999010 - 6999095
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| | |||||||  ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  6999010 ttataaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 6999095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 36103082 - 36103163
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| ||||||||||| | |||||||||||||||||  ||||||| ||||| ||||||  |||| |||| ||||||||    
T  36103082 aaagaaaaggtaggtatttacaggaaaatcaaaacaatagggagataaagtaaaaaataatgtaagtacgaaaaagaaagtt 36103163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36212002 - 36212086
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||  |||||  ||||||||||||  |||||| ||||||| ||||| |||||| |||||||||||| ||||||    
T  36212002 ttataaagaaaaagtaaatatttgcacgaaaatcaaagtaatagagagataaagtaaaa-ataatgtgagtatgaaagataaagtt 36212086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 42678870 - 42678793
Alignment:
Q  9 aaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||  ||| ||| |||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  42678870 aaaaagtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 42678793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 26206974 - 26206891
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaat-agatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| | |||||||||  |||||||||||| |||| ||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  26206974 taaagaaagaataggtatttgcacgaaaatcaaagcaataagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 26206891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 7574557 - 7574479
Alignment:
Q  8 gaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||| |||||||||  ||||||||||||  |||||| ||||||| ||||| ||| || |||||||||||| ||||||    
T  7574557 gaaaaaataggtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaatattgtgagtatgaaagaaaaagtt 7574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 22525942 - 22526021
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||| ||||  |||||||||||| ||||||  ||||||| ||||| |||||| || ||| ||||||||||||    
T  22525942 aaagaaaaagtaggcatttgcacgaaaatcaaagcaatag--agataaagtaaaaaataatgtgaatataaaagagaaagtt 22526021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 23352853 - 23352932
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||  ||||||| |||| ||||||  ||||||| ||||| |||||| |||||||| ||||||||||    
T  23352853 aaagaaaaagtatgtatttgcacgaaaaccaaagcaatag--agataaagtaaaaaataatgtgagtatgagagagaaagtt 23352932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 35589333 - 35589411
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||| | |||||  ||||||| |||||||||||| ||||||| |||||  ||||| |||||||| |||||||    
T  35589333 aaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatgagagagaaa 35589411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2841963 - 2841878
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | ||| |||||  |||||||||||| ||| ||| ||||||| ||||| |||||| |||||||| | ||||||||    
T  2841963 ttataaagaaagaatagatatttgcacgaaaatcaaagcaacagagagataaagtaaaaaataatgtgagtatgagaaagaaagtt 2841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 9377581 - 9377500
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| |||||  ||||||| |||| ||||||| ||||||| |||||  ||||| || ||||| ||||||||||    
T  9377581 aaagaaaaagtagatatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgaatatgagagagaaagtt 9377500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 9634382 - 9634463
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||||||||| | ||||||| |||||  ||||| |||||||| ||| ||||||    
T  9634382 aaagaaaaagttggtatttgcacgaaaaccaaaacaatatagagataaagtaaaaagtaatgtgagtatgagagaaaaagtt 9634463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 42866875 - 42866794
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | |||||  ||||| |||||| ||||||| ||||||| ||||| |||||| |||||||| ||| ||||||    
T  42866875 aaagaaaaagtggatatttgcacgaagatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagagaaaaagtt 42866794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4061904 - 4061983
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagaga 81  Q
    |||||||||||||||| ||||||  ||| ||| |||||||||||| ||||||| ||||| |||||  |||||||| |||||    
T  4061904 ttataaagaaaaagtatgtatttgcacggaaaccaaaacaatagagagataaagtaaaa-ataatatgagtatgagagaga 4061983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 38560782 - 38560722
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| | ||||||||    
T  38560782 acgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgacaaagaaagtt 38560722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 43513516 - 43513456
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||| ||||||| ||||| || | | |||||||||||||||||||    
T  43513516 acgaaaatcaaagcaatagagagataaagtaaaaaatgacgtgagtatgaaagagaaagtt 43513456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 15260858 - 15260897
Alignment:
Q  178 tttgaacatgcttttgtttgtaagaaactaagattagatg 217  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  15260858 tttgaacatgcttttgtttgtacgaaactaagataagatg 15260897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 11091308 - 11091386
Alignment:
Q  8 gaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||| | |||||||||||||| | | | ||||| ||||| |||||| | |||||| ||| ||||||    
T  11091308 gaaaaagtaggtatttacaagaaaatcaaaacaacaaagaaataaaataaaaaataatgtgggtatgagagaaaaagtt 11091386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 11384961 - 11385038
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||| || ||| ||||||| ||| |||||||||||| ||||||| ||||| || ||| |||||||| |||||||    
T  11384961 aaagaaaaattaagtaattatacggaaaccaaaacaatagagagataaagtaaaa-atgatgtgagtatgagagagaaa 11385038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18876863 - 18876921
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    |||||||||||||||||||||||  ||| ||| |||| ||||||| ||||||| |||||    
T  18876863 ttataaagaaaaagtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaa 18876921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 35705618 - 35705541
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||| |||| | ||||||| || | ||||| | ||||||| |||||||||||| |||||||| |||||||    
T  35705618 aaagaaaaagtag-tattgacacgaaaaccatagcaataaagagataaagtaaaatataatgtgagtatgagagagaaa 35705541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 1352462 - 1352429
Alignment:
Q  56 aaaatataatgcgagtatgaaagagaaagttttc 89  Q
    ||||||||||| ||||||||||||||||||||||    
T  1352462 aaaatataatgtgagtatgaaagagaaagttttc 1352429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24562959 - 24563016
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaa 58  Q
    |||||||||||| || |||||||| ||||||| |||| ||||||| ||||||| ||||    
T  24562959 ttataaagaaaaggttggtatttacacgaaaaccaaagcaatagagagataaaataaa 24563016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 32869951 - 32869870
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| | |||||||  ||||||| |||| ||||| | ||||||| ||||| ||||||  | ||||||||||||||||    
T  32869951 aaagaaaaaattggtatttgcacgaaaaccaaagcaataaagagataaagtaaaaaataatgtaaatatgaaagagaaagtt 32869870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 39213716 - 39213797
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||  |||  |||||| ||||||| ||||| |||||| |||||||| ||| ||||||    
T  39213716 aaagaaaaagttggtatttgcacgaaaactaaaggaatagagagataaagtaaaaaataatgtgagtatgagagataaagtt 39213797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 40700300 - 40700239
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||  |||||| ||||||| ||||| ||||||| |||||||| ||||||||||    
T  40700300 acgaaaatcaaagtaatagagagataaagtaaaaatataatgtgagtatgagagagaaagtt 40700239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 4758610 - 4758666
Alignment:
Q  30 aaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||| | ||||||| ||||||| ||||| |||||| || ||||||||||||||||    
T  4758610 aaatcatagcaatagagagataaaataaaaaataatgtgaatatgaaagagaaagtt 4758666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 15273614 - 15273654
Alignment:
Q  177 ttttgaacatgcttttgtttgtaagaaactaagattagatg 217  Q
    ||||||||||||||| |||||||||||||||| || |||||    
T  15273614 ttttgaacatgctttcgtttgtaagaaactaatataagatg 15273654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 44254726 - 44254643
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatag--atagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| |||||  | ||||| |||||||| ||  | ||||||| ||||| ||||| ||||||||| ||||||||||    
T  44254726 aaagaaaaagtagttatttgcaggaaaaccaaaacaacagaaagagataaagtaaaaaataatacgagtatgagagagaaagtt 44254643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 51466896 - 51466812
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||| |||||| |||||||||||| ||||||    
T  51466896 ttataaagaaaaagtaggtatttgtacggaaatcaaaacaatagagagataaagtaaaa-ataatgtgagtatgaaagaaaaagtt 51466812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 21093304 - 21093385
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| |||| |||||||||||||| ||||||| ||||||| ||||| |||||| || |||||| |||||||||    
T  21093304 aaagaaaaagtagatattaatacgaaaatcaaagcaatagagagataaaataaaaaataatgtgaatatgaatgagaaagtt 21093385  T

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Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52362611 - 52362526
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| |||||||  ||||||| |||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  52362611 ttataaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 52362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15705004 - 15705089
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| |||||||  ||||||| ||||||||||||  |||||| |||||  ||||| |||||||| ||||||||||    
T  15705004 ttataaagaaaaagttggtatttgcacgaaaaccaaaacaatagaatgataaagtaaaaagtaatgtgagtatgagagagaaagtt 15705089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 32915018 - 32915099
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||||||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  32915018 aaagaaaaagttggtatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 32915099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36577354 - 36577439
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| |||||||  |||||||||||| ||||| | ||||||| |||||  ||||| |||||||| ||||||||||    
T  36577354 ttataaagaaaaagttggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 36577439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 45417901 - 45417816
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| || ||||||  |||||||||||||||||||| ||||||| ||||| || ||| |||||||| | ||||||||    
T  45417901 ttataaagaaaaaatatgtatttgcacgaaaatcaaaacaatagagagataaattaaaaaatgatgtgagtatgagaaagaaagtt 45417816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50433898 - 50433813
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||||||||| |||| || ||||| ||||||| ||||||| ||||| || ||| |||||| | ||||||||||    
T  50433898 ttataaagaaaaagtaggtatttgtacggaagtcaaagcaatagagagataaagtaaaaaattatgtgagtataagagagaaagtt 50433813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 48625005 - 48624921
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagt 85  Q
    |||||||||||||||| ||||||  | |||||||||| ||||||| ||||||| ||||| |||||| |||||| | |||||||||    
T  48625005 ttataaagaaaaagtatgtatttgcatgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtataagagagaaagt 48624921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 40316886 - 40316968
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||||| |||||||  ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||| |||||||    
T  40316886 ttataaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaa 40316968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 41507140 - 41507222
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaa-aatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||| | | ||||| ||||| |||||||||||||| ||| || |||||| |||||||| ||||||||||    
T  41507140 aaagaaaaagtaggtattgacatgaaaaccaaaataatagatagataaagtaagaacataatgtgagtatgagagagaaagtt 41507222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 48326093 - 48326011
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| ||||||| ||||||||||||| ||||||| ||||||| | |||| ||||||  ||||||| ||||||||||    
T  48326093 aaagaaaaagttggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaaaataatgtaagtatgagagagaaagtt 48326011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 4608273 - 4608196
Alignment:
Q  9 aaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||| ||||||||| |||||||| |||||||||||  ||| ||| ||||| |||||| |||||||| ||||||||||    
T  4608273 aaaaaataggtatttgtacgaaaaccaaaacaatagtgagaaaaattaaaaaataatgtgagtatgagagagaaagtt 4608196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 5486021 - 5485940
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||  | |||||||||||||||||||||||| | ||||| ||||| ||||||  | ||| ||||||||||||    
T  5486021 aaagaaaaagtagaaaattatacgaaaatcaaaacaatagaaaaataaaataaaaaataatgtaaatataaaagagaaagtt 5485940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10627753 - 10627829
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaa 77  Q
    |||||||||||| || |||||| |||| ||||||||||||||||| ||||||| | ||||||||||| ||||||||||    
T  10627753 ttataaagaaaatgt-ggtattgatacaaaaatcaaaacaatagagagataaagtgaaaatataatgtgagtatgaaa 10627829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 10889992 - 10890073
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| ||||| |  |||||||||||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  10889992 aaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 10890073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 13489787 - 13489706
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  13489787 aaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 13489706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 15015523 - 15015442
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||||||||||| | ||||| ||||| ||||||  ||||||| ||||||||||    
T  15015523 aaagaaaaagttggtatttgcacgaaaaccaaaacaatagagatataaagtaaaaaataatgtaagtatgagagagaaagtt 15015442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 44789090 - 44789170
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||   |||||||||||| ||||||| ||||||| ||||| || ||| |||||||||||||||||||    
T  44789090 aaagaaaaaataggtattgc-acgaaaatcaaagcaatagagagataaagtaaaaaatgatgtgagtatgaaagagaaagtt 44789170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 47721534 - 47721453
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||| | |||||||||||| ||||||| ||||||| ||||| |||||| || ||||| | ||||||||    
T  47721534 aaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgaatatgagacagaaagtt 47721453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 47728526 - 47728445
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||| | |||||||||||| ||||||| ||||||| ||||| |||||| || ||||| | ||||||||    
T  47728526 aaagaaaaagtaagtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgaatatgagacagaaagtt 47728445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 48220090 - 48220171
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  || |||||||||  |||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  48220090 aaagaaaaagttggtatttgcacaaaaatcaaagaaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 48220171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 50328087 - 50328168
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||| ||||||| ||||||| |||||  ||| | |||||||||||||||||||    
T  50328087 aaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaacgtgagtatgaaagagaaagtt 50328168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50781512 - 50781597
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| | |||||||  ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  50781512 ttataaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 50781597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 52437607 - 52437538
Alignment:
Q  18 gtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||| |||||||||||||| ||||||| ||||||| | ||||||||||| |||||||| ||||||||||    
T  52437607 gtattgatacgaaaatcaaagcaatagaaagataaagtaaaaatataatgtgagtatgagagagaaagtt 52437538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 37588642 - 37588702
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||| ||||||| ||||| || ||| |||||||||||||||||||    
T  37588642 acgaaaatcaaagcaatagagagataaagtaaaaaattatgtgagtatgaaagagaaagtt 37588702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 49241456 - 49241532
Alignment:
Q  10 aaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||  ||||||| |||  ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  49241456 aaaagtaggtatttgcacgaaaaccaatgcaatagacagataaagtaaaaaataatgtgagtatgagagagaaagtt 49241532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33125267 - 33125345
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaaga 79  Q
    |||||||||||||||||||||||  |  |||| |||| ||||||| ||||||| |||||  ||||| ||||||||||||    
T  33125267 ttataaagaaaaagtaggtatttgcataaaaaccaaagcaatagaaagataaagtaaaaagtaatgtgagtatgaaaga 33125345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 33358104 - 33358186
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||||||| |||| || ||||||| | |||| |||||| |||||||| ||||||||||    
T  33358104 aaagaaaaagtgggtatttgcacgaaaatcaaatcaattgagagataaagtaaaaaaataatgtgagtatgagagagaaagtt 33358186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 50824866 - 50824788
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    |||||||||||||||||| | | ||||| |||| ||||||| ||||||| ||||| |||||  |||||||| |||||||    
T  50824866 aaagaaaaagtaggtattgacatgaaaaccaaagcaatagagagataaagtaaaaaataatatgagtatgagagagaaa 50824788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 8200200 - 8200119
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||| ||  ||||||| |||| |||||||  |||||| ||||| |||||| |||||||| ||||||||||    
T  8200200 aaagaaaaagtacgtagttgcacgaaaaccaaagcaatagagggataaagtaaaaaataatgtgagtatgagagagaaagtt 8200119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26967338 - 26967254
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||  | | ||| |||||||||||| ||||||| ||||| |||||| || | ||| ||||||||||    
T  26967338 ttataaagaaaaagtaggtatttgcatggaaaccaaaacaatagagagataaaataaaa-ataatgtgaatgtgagagagaaagtt 26967254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38713699 - 38713614
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| | |||||||  |||||||||||| ||||| | ||||||| ||||| |||||  || ||||| ||||||||||    
T  38713699 ttataaagaaaaaatgggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaaataatatgaatatgagagagaaagtt 38713614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 46911417 - 46911337
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||   |||||||||||| ||||||| ||||||| ||||| || ||| |||||||||||| ||||||    
T  46911417 aaagaaaaaataggtattgc-acgaaaatcaaagcaatagagagataaagtaaaaaatgatgtgagtatgaaagaaaaagtt 46911337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 8411693 - 8411745
Alignment:
Q  34 caaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  8411693 caaaacaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 8411745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 34040467 - 34040527
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||  |||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  34040467 acgaaaatcaaagtaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 34040527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 38303668 - 38303715
Alignment:
Q  39 caatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||| ||||||| ||||| ||||||||||||||| ||||||||||    
T  38303668 caatagagagataaagtaaaaaataatgcgagtatgagagagaaagtt 38303715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6340854 - 6340780
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    ||||||||||||| ||| |||| | |||||||||||| |||| || ||||||| |||||||| ||  ||||||||    
T  6340854 ttataaagaaaaaatagatattgacacgaaaatcaaagcaattgagagataaagtaaaatatcatatgagtatga 6340780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 9988053 - 9987995
Alignment:
Q  29 aaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||| ||| ||| ||||| ||||||| |||||||||||||||||||    
T  9988053 aaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagtt 9987995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 41677294 - 41677352
Alignment:
Q  29 aaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    |||| |||||||||||| ||||||| ||||| ||||||| |||||||||||||| ||||    
T  41677294 aaaaccaaaacaatagagagataaaataaaaatataatgtgagtatgaaagagacagtt 41677352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44294144 - 44294062
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||| |   |||||  ||||||||||||||||| || | ||||| ||||| |||||| |||||||| |||||||    
T  44294144 ttataaagaaaaaattaatatttgcacgaaaatcaaaacaattgagaaataaagtaaaaaataatgtgagtatgagagagaaa 44294062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 86
Target Start/End: Complemental strand, 47279731 - 47279701
Alignment:
Q  56 aaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||||||||||    
T  47279731 aaaatataatgcgagtatgaaagagaaagtt 47279701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 6143808 - 6143727
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||  ||||||| |||  || |||| | ||||| ||||| ||||||  ||||||| ||||||||||    
T  6143808 aaagaaaaagtaggtatttgcacgaaaaccaatgcactagaaatataaagtaaaaaataatgtaagtatgagagagaaagtt 6143727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 7275618 - 7275667
Alignment:
Q  10 aaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    |||| |||||||||||| ||||| ||||| |||||| |||||||||||||    
T  7275618 aaaattaggtatttatatgaaaaccaaaataatagagagataaactaaaa 7275667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21486260 - 21486344
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||| |||||   ||| ||| || | ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  21486260 ttataaagaaaaagta-gtattggcacggaaaccatagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 21486344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 30658795 - 30658875
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||   |||||||||||| ||||||| |||||||  |||| || ||| |||||||||||| ||||||    
T  30658795 aaagaaaaaataggtattgc-acgaaaatcaaagcaatagagagataaaggaaaaaatgatgtgagtatgaaagaaaaagtt 30658875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 35136969 - 35136888
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||  ||||||  || ||||||||| ||||||| ||||||| |||||  ||||| |||||||| | ||||||||    
T  35136969 aaagaaaaagtttgtatttgcacaaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatgagaaagaaagtt 35136888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 47820467 - 47820528
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||| ||||||| | |||| || ||| |||||||||||||||||||    
T  47820467 acgaaaatcaaagcaatagagagataaagtaaaaaaatgatgtgagtatgaaagagaaagtt 47820528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25259212 - 25259148
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataat 65  Q
    ||||||||||||| | |||||||  | |||||||||||||||||| | ||||| ||||| |||||    
T  25259212 ttataaagaaaaaattggtatttgcatgaaaatcaaaacaatagagaaataaagtaaaaaataat 25259148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43769747 - 43769655
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagttttcgtta 93  Q
    |||||||||||||||| ||||||  |  |||| |||| ||||||| | ||||| ||||| ||||   |||||||||||| |||||| ||||||    
T  43769747 ttataaagaaaaagtaagtattttcagaaaaaccaaagcaatagaaaaataaagtaaaaaataagatgagtatgaaagataaagttatcgtta 43769655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 51573578 - 51573658
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagt 85  Q
    ||||||||| ||||||||| ||||||||||||| ||||||| ||||||| ||||| |||||| ||||||||||||||||||    
T  51573578 aaagaaaaaataggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgaaagagaaagt 51573658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 28458323 - 28458404
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||| | |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  28458323 aaagaaaaagtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 28458404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 21617309 - 21617227
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| | |||||||||  |||||||||||||||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  21617309 taaagaaagaataggtatttgcacgaaaatcaaaacaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 21617227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 13086147 - 13086066
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||||||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  13086147 aaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaaataaaaagtaatgtgagtatgagagagaaagtt 13086066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 18882921 - 18883002
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||| ||||||||||||| ||||||| ||||||| |||||  || || |||||||| ||||||||||    
T  18882921 aaagaaaaaataggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaagtattgtgagtatgagagagaaagtt 18883002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38338864 - 38338949
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| |||||||||  || ||||||||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  38338864 ttataaagaaaaaataggtatttgcacaaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 38338949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 43769836 - 43769755
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||| ||||||||| | ||||||| ||||| |||||| |||||||| ||||||||||    
T  43769836 aaagaaaaagtgggtatttgcacgaaaattaaaacaataaagagataaagtaaaaaataatgtgagtatgagagagaaagtt 43769755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9362621 - 9362679
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    |||||||||||||||||||||||  ||| |||||||||||||||| ||||||| |||||    
T  9362621 ttataaagaaaaagtaggtatttgcacggaaatcaaaacaatagagagataaagtaaaa 9362679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 13139273 - 13139192
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| ||||| |||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  13139273 aaagaaaaagttggtatttgcacgaaaaccaaaaaaatagagagataaattaaaaggtaatgtgagtatgagagagaaagtt 13139192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 22819774 - 22819693
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||||||| ||||| | ||||||| |||||  ||||| |||||||| ||||||||||    
T  22819774 aaagaaaaagttggtatttgcacgaaaatcaaagcaataaagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 22819693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39312558 - 39312643
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| |||||||||  ||||||| |||| ||||| | ||||||  ||||| |||||| |||||||| ||||||||||    
T  39312558 ttataaagaaaaaataggtatttgcacgaaaaccaaagcaataaagagataatataaaaaataatgtgagtatgagagagaaagtt 39312643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 46405920 - 46406001
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||||||| ||||||| ||||||| |||||  ||||| |||||||| ||| ||||||    
T  46405920 aaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaattaatgtgagtatgagagaaaaagtt 46406001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 51887788 - 51887707
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||| | || ||||||  |||||||||||||||||||| ||||||| ||||| |||||  |||||||| ||||||||||    
T  51887788 aaagaaagaatatgtatttgcacgaaaatcaaaacaatagagagataaagtaaaaaataatttgagtatgagagagaaagtt 51887707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 31559659 - 31559585
Alignment:
Q  10 aaaagtaggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||| | ||||||| |||||||||||| ||| ||| | ||||||||||| |||||||| |||||||    
T  31559659 aaaagtaggtattaacacgaaaaccaaaacaatagagagagaaagtaaaaatataatgtgagtatgagagagaaa 31559585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42667334 - 42667276
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||| |||||    
T  42667334 ttataaagaaaaagtaagtatttacacggaaaccaaaacaatagagagataaagtaaaa 42667276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 49768263 - 49768345
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| | |||||||||  |||||||||||| ||||||| ||||||| ||||| |||||  |||||| | ||||||||||    
T  49768263 taaagaaataataggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatatgagtattagagagaaagtt 49768345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 49896612 - 49896682
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    ||||||||||| |||||| | |||||||||||| ||||||| ||||||| ||||| |||||| || |||||    
T  49896612 aaagaaaaagttggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgactatga 49896682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 53647367 - 53647425
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    ||||||||||||  |||||||||||||| |||||||| ||||||| ||||||| |||||    
T  53647367 ttataaagaaaagataggtatttatacggaaatcaaagcaatagagagataaagtaaaa 53647425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 14593952 - 14593872
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||  ||||||||||||| ||||||| || |||| ||||| || ||| |||||||||| ||||||||    
T  14593952 aaagaaaaaataggtattg-tacgaaaatcaaagcaatagagaggtaaagtaaaaaatgatgtgagtatgaaatagaaagtt 14593872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 33860771 - 33860691
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||  ||| ||| |||||||||||| ||||||| ||||| || ||| |||||||| ||||||||||    
T  33860771 aaagaaaaagtaagtatttgcacggaaaccaaaacaatagagagataaagtaaaa-atgatgtgagtatgagagagaaagtt 33860691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 56271485 - 56271416
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatg 74  Q
    |||||||||||||||||||  ||||||| |||| ||||||| ||||||| |||||  |||||| ||||||    
T  56271485 aaagaaaaagtaggtatttgcacgaaaaccaaagcaatagagagataaaataaaaagtaatgcaagtatg 56271416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 21172405 - 21172346
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataa 64  Q
    ||||||||||||| |||| ||||||||| |||||||||| | ||||||| ||||| ||||    
T  21172405 aaagaaaaagtagatattgatacgaaaaccaaaacaataaagagataaagtaaaaaataa 21172346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 54802618 - 54802677
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaat 60  Q
    ||||||||||||| |||||||| | |||||||| ||| ||||||| ||||||| ||||||    
T  54802618 ttataaagaaaaaataggtattgacacgaaaattaaagcaatagagagataaagtaaaat 54802677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 2999237 - 2999163
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaaga 79  Q
    ||||||||||| |||||||  | ||||| |||| ||||||| ||||||| ||||| |||||| || |||||||||    
T  2999237 aaagaaaaagttggtatttgcatgaaaaccaaagcaatagagagataaagtaaaaaataatgtgaatatgaaaga 2999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 5932733 - 5932791
Alignment:
Q  29 aaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||||||| | |||||||  |||||| |||||||| ||||||||||    
T  5932733 aaaatcaaaacaatagatagagacactaaaaggataatgtgagtatgagagagaaagtt 5932791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 4949630 - 4949550
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| |||||| |||| ||| ||||||||||   ||||||| ||||| || ||| |||||||| ||||||||||    
T  4949630 aaagaaaaagtaagtatttgtacggaaaccaaaacaataatgagataaagtaaaa-atgatgtgagtatgagagagaaagtt 4949550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14010060 - 14010145
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| | |||||||  ||||||| ||||| |||||| ||||||| |||||  ||||  |||||||| ||| ||||||    
T  14010060 ttataaagaaaaaattggtatttgcacgaaaaccaaaataatagagagataaagtaaaaagtaatatgagtatgagagaaaaagtt 14010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 32696306 - 32696225
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| ||||   |||||||||||| ||||| | ||||||| ||||| | |||| || ||||| ||||||||||    
T  32696306 aaagaaaaagtagatattggcacgaaaatcaaagcaataaagagataaagtaaaaaacaatgtgaatatgagagagaaagtt 32696225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 37514078 - 37514159
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| ||   |||||||||||| ||||||| ||||||| |||||    ||| |||||||| ||||||||||    
T  37514078 aaagaaaaagtaggttttggcacgaaaatcaaagcaatagagagataaagtaaaaacatatgtgagtatgagagagaaagtt 37514159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 42815529 - 42815448
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||| |||||||||| |||  |||||||||||| ||||||| ||||||| |||||    ||| |||||||| ||||||||||    
T  42815529 aaaggaaaagtaggtttttgcacgaaaatcaaagcaatagagagataaagtaaaaacatatgtgagtatgagagagaaagtt 42815448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 47288203 - 47288126
Alignment:
Q  10 aaaagtaggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||  | ||| ||| |||||||||||| ||| ||| | ||||||||| |||||||||| ||||||||||    
T  47288203 aaaagtaggtatcgacacggaaaccaaaacaatagagagaaaaagtaaaaatataacgcgagtatgagagagaaagtt 47288126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 5249984 - 5249912
Alignment:
Q  15 taggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| | ||||||| |||||||||||| ||| ||| | |||| |||||| |||||||| ||||||||||    
T  5249984 taggtattgacacgaaaaccaaaacaatagagagagaaagtaaaaacataatgtgagtatgagagagaaagtt 5249912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 13263364 - 13263424
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||| ||||||| ||||| |||| | |||||| | ||||||||||    
T  13263364 acgaaaatcaaagcaatagagagataaagtaaaaaataaagtgagtataagagagaaagtt 13263424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 51194373 - 51194313
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||| || ||||||||| ||||||| |||||  | ||| |||||||||||||||||||    
T  51194373 acgaaaaccataacaatagagagataaagtaaaaagtgatgtgagtatgaaagagaaagtt 51194313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 21136388 - 21136306
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagttt 87  Q
    ||||||||||||||||||||||  |||| |||||||||||| ||||||| ||||| |||| | ||||||||||||||||||||    
T  21136388 aaagaaaaagtaggtatttatataaaaaccaaaacaatagagagataaagtaaaaaataacgtgagtatgaaagagaaagttt 21136306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 9581704 - 9581623
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||  ||| ||| |||||||||||| ||||||| ||||| |||||| |||||||||||||||||||    
T  9581704 aaagaaaaagtaggtatttgcacggaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatgaaagagaaagtt 9581623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 20770256 - 20770175
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||| | |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  20770256 aaagaaaaagtaggtattgacacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 20770175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32912167 - 32912085
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||||| ||||| |||||  ||||| |||||||| |||||||    
T  32912167 ttataaagaaaaagttggtatttacacgaaaaccaaaacaatagataaataaagtaaaaagtaatgtgagtatgagagagaaa 32912085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3640139 - 3640224
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| |||||||  | |||||||||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  3640139 ttataaagaaaaagtgggtatttgcatgaaaatcaaagcaatagaaagataaagtaaaaaataatgtgagtatgagagagaaagtt 3640224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 1839291 - 1839372
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||| |||||  ||||||| |||||||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  1839291 aaagaaaaaatagatatttgcacgaaaaccaaaacaatagaaagataaagtaaaaaataatgtgagtatgagagagaaagtt 1839372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 6292246 - 6292165
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||| | ||||||||| |||||||||||||| |||||| ||||||| ||||| |||||| |||||| | ||||||||||    
T  6292246 aaagaaataataggtatttgtacgaaaatcaaaataatagagagataaagtaaaaaataatgtgagtataagagagaaagtt 6292165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 9226425 - 9226345
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||  ||| |||||||||||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  9226425 aaagaaaaagtaagtatttgcacggaaatcaaaacaatagagagataaagtaaaa-ataatgtgagtatgagagagaaagtt 9226345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 10649560 - 10649479
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| ||||| |  |||||||||||| ||||||| ||||||| |||||  ||||| |||||||||||||||||||    
T  10649560 aaagaaaaagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatgaaagagaaagtt 10649479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30640919 - 30640834
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | ||||||||| ||||||||||||| ||||||| ||||||| ||||| ||||||  | ||||| ||||||||||    
T  30640919 ttataaagaaagaataggtatttgtacgaaaatcaaagcaatagagagataaagtaaaaaataatgtaaatatgagagagaaagtt 30640834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34888751 - 34888835
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||| || || |||||| |||| |||||||||||||||| ||||||| ||||| |||||| |||| ||||||||||||||    
T  34888751 ttataaagaataattatgtatttgtacggaaatcaaaacaatagagagataaagtaaaa-ataatgtgagtgtgaaagagaaagtt 34888835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 41175652 - 41175733
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||| |||||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  41175652 aaagaaaaagtgggtatttgcacgaagatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 41175733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 8675379 - 8675457
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||| |||||||  |||||||||||| ||||||| ||||||| |||||  ||||| |||||||| |||||||    
T  8675379 aaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaa 8675457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 189645 - 189730
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| | |||||  ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  189645 ttataaagaaaaagttgatatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 189730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 4098736 - 4098679
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatat 62  Q
    ||||||||||||| |||| ||||||||||||||||||| || ||||||| ||||||||    
T  4098736 aaagaaaaagtagatattgatacgaaaatcaaaacaattgagagataaagtaaaatat 4098679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4771626 - 4771541
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | || ||||||  || ||||||||| ||||||| ||||||| ||||| |||||| ||||||| |||||||||||    
T  4771626 ttataaagaaagaatatgtatttgcacaaaaatcaaagcaatagagagataaaataaaaaataatgtgagtatgcaagagaaagtt 4771541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 15952991 - 15953072
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||||||| ||||||| ||||||| ||||| |||||  |||||||| ||| ||||||    
T  15952991 aaagaaaaagtgggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatatgagtatgagagaaaaagtt 15953072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 19481128 - 19481209
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||| | |||||||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  19481128 aaagaaaaagttggtatttgcacgaagaccaaaacaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 19481209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 15478783 - 15478705
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||| | |||||  ||||||| ||||||||| || ||||||| ||||| |||||| |||||||| |||||||    
T  15478783 aaagaaaaagttgatatttgcacgaaaaccaaaacaattgagagataaagtaaaaaataatgtgagtatgagagagaaa 15478705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 34124746 - 34124668
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||| |||||||| ||||||| |||| ||||||| | ||||| |||||  ||||| |||||||| |||||||    
T  34124746 aaagaaaaagttggtatttacacgaaaaccaaagcaatagagaaataaagtaaaaagtaatgtgagtatgagagagaaa 34124668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 38704143 - 38704213
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    ||||||||||| |||||||  |||||||||||| ||||||| | ||||| ||||| |||||| ||||||||    
T  38704143 aaagaaaaagttggtatttgcacgaaaatcaaagcaatagaaaaataaagtaaaaaataatgtgagtatga 38704213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 43196570 - 43196652
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| | || ||||||  |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| | ||||||||    
T  43196570 taaagaaagaatacgtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagaaagaaagtt 43196652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43214001 - 43214075
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    ||||||||||||| |||||||||  ||||||| |||||||||| | ||||||| |||||  ||||| ||||||||    
T  43214001 ttataaagaaaaaataggtatttgcacgaaaaccaaaacaataaagagataaagtaaaaagtaatgtgagtatga 43214075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 7287159 - 7287217
Alignment:
Q  29 aaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    |||| |||||||||||| ||| ||| ||||| ||||||| |||||||||||||||||||    
T  7287159 aaaaccaaaacaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagtt 7287217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 13089751 - 13089809
Alignment:
Q  29 aaaatcaaaacaatagatagataaactaaaat-ataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||| ||||||| || ||| |||||| |||||||||||||||||||    
T  13089751 aaaatcaaagcaatagagagataaagtagaatgataatgtgagtatgaaagagaaagtt 13089809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 34270452 - 34270374
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    |||| ||||||||||||||  ||||||| |||  ||| ||| ||||||| ||||| |||||| |||||||| |||||||    
T  34270452 aaaggaaaagtaggtatttgcacgaaaaccaatgcaacagagagataaagtaaaaaataatgggagtatgagagagaaa 34270374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 6931017 - 6931086
Alignment:
Q  17 ggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||| | ||| |||||| | ||||||| ||||||| ||||| |||||| |||||||||||| ||||||    
T  6931017 ggtattgacacggaaatcatagcaatagagagataaagtaaaaaataatgtgagtatgaaagataaagtt 6931086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 11089 - 11008
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  |||||||||||||||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  11089 aaagaaaaagtgggtatttgcacgaaaatcaaaacaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 11008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 46532631 - 46532546
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||| ||||||| ||||| |||||| ||||||||  |||||||||    
T  46532631 ttataaagaaaaattaggtatttacacgaaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatgagtgagaaagtt 46532546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 31844551 - 31844629
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||||||||| ||| |||| |||||||||||| ||||||| ||||| |||||| |||||| |||||||||    
T  31844551 aaagaaaaagtaggtatttgtacaaaaaccaaaacaatagagagataaagtaaaaaataatgtgagtataaaagagaaa 31844629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41458725 - 41458640
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||  || ||||||||||||||| | | ||||| ||||| |||||| |||||||| ||||||||||    
T  41458725 ttataaagaaaaagtaggtatttgcacaaaaatcaaaacaatatagaaataaagtaaaaaataatgtgagtatgagagagaaagtt 41458640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4225881 - 4225807
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    |||||||||||||||||||||| | ||||||| |||||||||||| ||||||| |||||||| ||| || |||||    
T  4225881 ttataaagaaaaagtaggtattgacacgaaaaccaaaacaatagagagataaagtaaaatatcatgtgaatatga 4225807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 3293258 - 3293173
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||  | |||||||||| ||||||| ||||||| ||||| || ||| || ||||| ||||||||||    
T  3293258 ttataaagaaaaagtaggtatttgcatgaaaatcaaagcaatagagagataaagtaaaaaattatgtgaatatgagagagaaagtt 3293173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35452515 - 35452600
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||| ||||||||  ||| |||||||| ||||||| ||||||| ||||| || ||| |||||||| ||||||||||    
T  35452515 ttataaagaaaaagaaggtatttgcacggaaatcaaagcaatagagagataaagtaaaaaattatgtgagtatgagagagaaagtt 35452600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 43482648 - 43482568
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||  ||||||| |||||||||||| ||||||| ||||| |||||| |||||||| | ||||||||    
T  43482648 aaagaaaaagtaggtatttgcacgaaaaccaaaacaatagagagataaagtaaaa-ataatgtgagtatgataaagaaagtt 43482568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1504303 - 1504385
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaa-aatataatgcgagtatgaaagagaaa 83  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||| ||||||| ||| ||||||||   |||||||||||||||    
T  1504303 ttataaagaaaa-gtaggtattgatacgaaaaccaaaacaatagagagataaagtaagaatataatataagtatgaaagagaaa 1504385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 18505902 - 18505820
Alignment:
Q  2 tataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||| ||| ||||| |||| |||||| |||||||||| |||||    
T  18505902 tataaagaaaaacgaggtattgatacaaaaatcaaaacaatagagagagaaactaaaaacataatgtgagtatgaaaaagaaa 18505820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 21559924 - 21559842
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| | |||||||||  |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| ||| ||||||    
T  21559924 taaagaaataataggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagagataaagtt 21559842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33180652 - 33180734
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||| ||| || ||||||  ||||||| |||||||||||| ||||||| ||||| |||||| |||||||| |||||||    
T  33180652 ttataaagagaaattatgtatttgcacgaaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatgagagagaaa 33180734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 7817761 - 7817681
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | |||||  |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  7817761 aaagaaaaagtggatatttgcacgaaaatcaaagcaatagagagataaagtaaaa-ataatgtgagtatgagagagaaagtt 7817681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 11565017 - 11564937
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||   |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  11565017 aaagaaaaaataggtattgc-acgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 11564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 21822545 - 21822622
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaa 82  Q
    ||||||||| | |||||||| ||||||||||||  |||||| ||||||| |||||  |||||||||||||| ||||||    
T  21822545 aaagaaaaaattggtatttacacgaaaatcaaagtaatagagagataaagtaaaaagtaatgcgagtatgagagagaa 21822622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 28036869 - 28036788
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||| ||||||| ||||||| ||||| |||||| |||||| | ||||||||||    
T  28036869 aaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtataagagagaaagtt 28036788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 41399109 - 41399190
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| || ||||||| ||||||| |||||||||||| ||||||| ||||| |||||  |||||||| ||| ||||||    
T  41399109 aaagaaaaaataagtatttacacgaaaaccaaaacaatagagagataaagtaaaaaataatatgagtatgagagataaagtt 41399190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 10055578 - 10055648
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    ||||||||||| ||||||| ||| |||| |||| ||||||| ||||||| ||||| |||||| ||||||||    
T  10055578 aaagaaaaagttggtatttgtacaaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatga 10055648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 40231656 - 40231722
Alignment:
Q  9 aaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    ||||| ||| ||||| |||||||| |||||||||||| ||||||| ||||| |||||| ||||||||    
T  40231656 aaaaaatagatatttgtacgaaaaccaaaacaatagagagataaagtaaaaaataatgtgagtatga 40231722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 3062455 - 3062374
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| |||||||||  || |||| |||||||||||| ||||||| |||||  ||||| |||||| | ||||||||||    
T  3062455 aaagaaaaaataggtatttgcacaaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtataagagagaaagtt 3062374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8920609 - 8920666
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaa 58  Q
    |||||||||||| ||||||||||  ||| |||||||||||||||| ||||||| ||||    
T  8920609 ttataaagaaaacgtaggtatttgcacggaaatcaaaacaatagagagataaagtaaa 8920666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 35588837 - 35588898
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatg 66  Q
    ||||||||||| |||||||  |||||||||||| ||||||| ||||||| ||||| ||||||    
T  35588837 aaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatg 35588898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 41894040 - 41893959
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||| |||||| ||||| |  ||||||| |||||||| ||| ||||||| |||||  ||||| |||||||||||||||||||    
T  41894040 aaaggaaaagttggtatatgcacgaaaaccaaaacaacagagagataaagtaaaaagtaatgtgagtatgaaagagaaagtt 41893959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43573485 - 43573570
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| | |||||||  ||||||| |||| ||||||| ||||||| |||||  ||||| || ||||| ||||||||||    
T  43573485 ttataaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgaatatgagagagaaagtt 43573570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3343272 - 3343354
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||||| || ||||  ||||||| |||| ||||||| ||||||| |||||  ||||| || ||||| |||||||    
T  3343272 ttataaagaaaaagttgggatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgaatatgagagagaaa 3343354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 41396965 - 41397039
Alignment:
Q  9 aaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||| |||||||||| ||||||||||||||||   | ||||||| ||||| ||||| | | |||||||||||||    
T  41396965 aaaaaataggtatttacacgaaaatcaaaacaacgtagagataaagtaaaaaataatacaaatatgaaagagaaa 41397039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 42926264 - 42926210
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    |||||||||||| |||||| |||  |||||||||||||||| ||||||| |||||    
T  42926264 aaagaaaaagtaagtatttgtacagaaatcaaaacaatagagagataaagtaaaa 42926210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 46812850 - 46812912
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatg 66  Q
    |||||||| | |||||||||  || ||||||||||||||||| ||||||| ||||| ||||||    
T  46812850 taaagaaagaataggtatttgcacaaaaatcaaaacaatagagagataaagtaaaaaataatg 46812912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 12634379 - 12634460
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||| ||||||| ||||||| |||||||||||  ||||||| | ||||| ||||| |||||  |||||||| ||| ||||||    
T  12634379 aaaggaaaagtatgtatttacacgaaaatcaatgcaatagagaaataaagtaaaaaataatatgagtatgagagataaagtt 12634460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 12645856 - 12645917
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatg 66  Q
    ||||||||||| | |||||  |||||||||||| ||||||| ||||||| ||||| ||||||    
T  12645856 aaagaaaaagttgatatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatg 12645917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 42584907 - 42584846
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    |||| ||||||| ||||||| ||||||| ||||| ||||||| |||||||| ||||||||||    
T  42584907 acgagaatcaaagcaatagagagataaagtaaaaatataatgtgagtatgagagagaaagtt 42584846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 46829604 - 46829523
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| ||   |||||||||||| ||||||| ||||||| |||||    ||| |||||||| ||||||||||    
T  46829604 aaagaaaaagtaggttttggcacgaaaatcaaagcaatagagagataaagtaaaaacatatgtgagtatgagagagaaagtt 46829523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 47495070 - 47495018
Alignment:
Q  30 aaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaa 82  Q
    |||| ||||||||||| ||||||| ||||| |||||| |||||||| ||||||    
T  47495070 aaattaaaacaatagagagataaagtaaaaaataatgtgagtatgatagagaa 47495018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 28944924 - 28945006
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||| ||||||||| ||||||||||||| ||||||| | ||||| ||||| ||||||  ||||||||||||||||||    
T  28944924 taaagaaaaaataggtatttgtacgaaaatcaaagcaatagagaaataaagtaaaaaataatgttagtatgaaagagaaagtt 28945006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2689007 - 2689091
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||  ||  ||| |||||||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  2689007 ttataaagaaaaagtaggtatttgcacataaaccaaaacaatagagagataaagtaaaa-ataatgtgagtatgagagagaaagtt 2689091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5028208 - 5028293
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||| |||||| ||||||| |||| ||||| | ||||||| |||||  ||||| |||||| | ||||||||||    
T  5028208 ttataaagaaaaagtagatatttacacgaaaaccaaagcaataaagagataaagtaaaaagtaatgtgagtataagagagaaagtt 5028293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 13143328 - 13143409
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||  ||||||  |||||||||||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  13143328 aaagaaaaagtttgtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 13143409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 14693198 - 14693279
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||  ||| ||| |||| ||| ||| ||||||| ||||| |||||| |||||| ||||||||||||    
T  14693198 aaagaaaaagtaggtatttgcacggaaaccaaagcaacagagagataaagtaaaaaataatgtgagtatcaaagagaaagtt 14693279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 14699610 - 14699691
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||  ||||||| |||| ||| ||| ||||||| ||||| |||||| |||||||| | ||||||||    
T  14699610 aaagaaaaagtaggtatttgcacgaaaaccaaagcaacagagagataaagtaaaaaataatgtgagtatgagaaagaaagtt 14699691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 33421884 - 33421804
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||   |||||||||||| ||||||| ||||||| ||||| || ||| |||||||||||||||||||    
T  33421884 aaagaaaaaataggtattgc-acgaaaatcaaagcaatagagagataaagtaaaaaatgatgtgagtatgaaagagaaagtt 33421804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 34037103 - 34037023
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||  |||||||||||||||||| | ||||||| ||||| || ||  |||||||||||||||||||    
T  34037103 aaagaaaaagtatgtatttgcacgaaaatcaaaacaataaagagataaagtaaaa-atgatatgagtatgaaagagaaagtt 34037023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 35213507 - 35213588
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  35213507 aaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 35213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24842496 - 24842414
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaag 84  Q
    |||||| ||||||||||||||||  ||| ||| ||||| |||||| ||||||| ||||| |||||| |||||||| ||||||||    
T  24842496 ttataaggaaaaagtaggtatttgcacggaaaccaaaaaaatagagagataaagtaaaa-ataatgtgagtatgagagagaaag 24842414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 6531126 - 6531210
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaa---aacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| ||||||  |||||||||||   || |||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  6531126 aaagaaaaagtatgtatttgcacgaaaatcaaagcaataatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 6531210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 754384 - 754465
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||| ||| ||||||    
T  754384 aaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagaaaaagtt 754465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 868898 - 868979
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| |||||| ||| |||| |||| ||||||| ||||||| ||||| |||||  || ||||| ||||||||||    
T  868898 aaagaaaaagtaagtatttgtacaaaaaccaaatcaatagagagataaagtaaaaaataatatgaatatgagagagaaagtt 868979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 18141247 - 18141328
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||| |||| ||||| |  |||||||||||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  18141247 aaagaataagttggtatgtgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 18141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 26832770 - 26832693
Alignment:
Q  6 aagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    |||||||| || ||||||  ||||||| |||||||||||| ||||||| ||||| || ||| |||||||| |||||||    
T  26832770 aagaaaaactatgtatttgcacgaaaaccaaaacaatagagagataaagtaaaaaatgatgtgagtatgagagagaaa 26832693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 1369485 - 1369431
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    ||||||||||| |||||||  |||||||||||| ||||||| ||||||| |||||    
T  1369485 aaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaa 1369431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 30945918 - 30945868
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaat-ataatgcgagtatga 75  Q
    |||||||||||| ||||||||||||||| |||||| |||||| ||||||||    
T  30945918 acgaaaatcaaatcaatagatagataaagtaaaatcataatgtgagtatga 30945868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 31413642 - 31413596
Alignment:
Q  13 agtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    |||||||||| |||||||||||||| ||||||| ||||||| |||||    
T  31413642 agtaggtattaatacgaaaatcaaagcaatagagagataaagtaaaa 31413596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 31749490 - 31749436
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    ||||||||| ||| |||||| |||||||| ||||||||||| ||||||| |||||    
T  31749490 aaagaaaaaatagatatttacacgaaaattaaaacaatagagagataaagtaaaa 31749436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 32459462 - 32459544
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaata-taatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||| ||||||| ||||||| ||||| | ||||| || ||||| ||||||||||    
T  32459462 aaagaaaaagttggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaaagtaatgtgaatatgagagagaaagtt 32459544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 13658956 - 13658876
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| |||| | ||| ||| || | ||||||| |||| || ||||| |||||| |||||||||||||||||||    
T  13658956 aaagaaaaagtag-tattgacacggaaaccatatcaatagagagatcaagtaaaaaataatgtgagtatgaaagagaaagtt 13658876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32046827 - 32046746
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaa 82  Q
    ||||||||||||||| | |||||  || |||  ||| |||||||| ||||||| ||||| |||||| |||||||| ||||||    
T  32046827 ttataaagaaaaagttgttatttgcacaaaatccaacacaatagagagataaagtaaaaaataatgtgagtatgagagagaa 32046746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 9050258 - 9050174
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagttttc 89  Q
    ||||||| |||||||| ||  ||||||||||||| |||||| ||||||| ||||| ||| || || ||||| ||| ||| |||||    
T  9050258 aaagaaatagtaggtagttgcacgaaaatcaaaataatagaaagataaagtaaaaaatattgtgaatatgagagacaaaattttc 9050174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 37597363 - 37597282
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| ||||| ||||| |||||||||||| ||||||| | ||||| ||||| |||||| |||||||||||||||||||    
T  37597363 aaagaaaaggtagggatttacacgaaaatcaaagcaatagagaaataaagtaaaaaataatgtgagtatgaaagagaaagtt 37597282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 36885434 - 36885513
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagt 85  Q
    |||||||||||||||||| | |||||||||||| ||||| | ||||||| ||||| |||||| |||||||| |||||||||    
T  36885434 aaagaaaaagtaggtattgacacgaaaatcaaagcaataaagagataaagtaaaa-ataatgtgagtatgagagagaaagt 36885513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2733116 - 2733032
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||  ||| ||| ||||| |||||| ||||||| ||||| |||||| |||||||| ||| ||||||    
T  2733116 ttataaagaaaaagtaggtatttgcacggaaaccaaaataatagagagataaagtaaaa-ataatgtgagtatgagagaaaaagtt 2733032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4994510 - 4994425
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||| |||||  ||| ||| |||| ||||||| ||||||| ||||| |||||| |||||||| ||| ||||||    
T  4994510 ttataaagaaaaagtagatatttgcacggaaaccaaatcaatagagagataaagtaaaaaataatgtgagtatgagagataaagtt 4994425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 12707270 - 12707193
Alignment:
Q  9 aaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||| |||||||| ||||||| |||||||||||| ||||||| |||||  ||| | |||||||| ||||||||||    
T  12707270 aaaaagttggtatttacacgaaaaccaaaacaatagagagataaattaaaaagtaacgtgagtatgagagagaaagtt 12707193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 16872102 - 16872183
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | |||||  |||||||||||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  16872102 aaagaaaaagttgatatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatgtgagtatgatagagaaagtt 16872183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 29991536 - 29991456
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||   |||||||||||| ||||||| ||||||| ||||| || ||| |||||||||||||||||||    
T  29991536 aaagaaaaaataggtattgc-acgaaaatcaaagcaatagagagataaagtaaaaaatgatgtgagtatgaaagagaaagtt 29991456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 30439452 - 30439533
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| |  ||||||  |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  30439452 aaagaaaaaatgagtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 30439533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42569671 - 42569756
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| | |||||| |||||||||||| ||||| | ||||||| |||||  ||||| || ||||| ||||||||||    
T  42569671 ttataaagaaaaagttgatatttacacgaaaatcaaagcaataaagagataaagtaaaaagtaatgtgaatatgagagagaaagtt 42569756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 5277650 - 5277728
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||| | || ||||||  |||||||||||| ||||||| ||||||| ||||| |||||| |||||||| |||||||    
T  5277650 aaagaaagaatatgtatttgcacgaaaatcaaagcaatagagagataaaataaaaaataatgtgagtatgagagagaaa 5277728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12783894 - 12783836
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    ||||||||||||| ||||||||| |||| ||| |||||||||||| ||||||| |||||    
T  12783894 ttataaagaaaaaataggtatttgtacggaaaccaaaacaatagagagataaagtaaaa 12783836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 28646801 - 28646715
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||| ||||| |||||||| |||| ||| ||| ||||||| | |||| || ||| |||||||| ||||||||||    
T  28646801 ttataaagaaaaagtagatatttgtacgaaaaccaaagcaacagagagataaagtaaaaaaattatgtgagtatgagagagaaagtt 28646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 28651385 - 28651299
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||| ||||| |||||||| |||| ||| ||| ||||||| | |||| || ||| |||||||| ||||||||||    
T  28651385 ttataaagaaaaagtagatatttgtacgaaaaccaaagcaacagagagataaagtaaaaaaattatgtgagtatgagagagaaagtt 28651299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 9208192 - 9208121
Alignment:
Q  2 tataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    ||||||||||||||||||||||  ||| ||| |||||||||||| ||||||| ||||| |||||| ||||||||    
T  9208192 tataaagaaaaagtaggtatttgcacgtaaaccaaaacaatagagagataaa-taaaa-ataatgtgagtatga 9208121  T

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Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29440465 - 29440549
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||| |||||||||| ||||||  ||| |||||||||||||||| ||||||| ||||| || ||| |||||||| | ||||||||    
T  29440465 ttatacagaaaaagtaagtatttgcacggaaatcaaaacaatagagagataaagtaaaa-atgatgtgagtatgagaaagaaagtt 29440549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 31597073 - 31596992
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  || |||| |||||||||||| ||||||| |||||  ||||| |||||||| ||||| ||||    
T  31597073 aaagaaaaagttggtatttgcacaaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatgagagagagagtt 31596992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 34490108 - 34490184
Alignment:
Q  9 aaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||| | |||||| |||||||||||| ||||||| ||||||| ||||| |||||| |||||| | ||||||||||    
T  34490108 aaaaagttgatatttacacgaaaatcaaagcaatagaaagataaagtaaaa-ataatgtgagtataagagagaaagtt 34490184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 8671515 - 8671583
Alignment:
Q  19 tatttatacgaaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    |||| |||| |||||||||  |||||| ||||||| ||||| |||||||||||||||| ||||||||||    
T  8671515 tattgatacaaaaatcaaagtaatagagagataaagtaaaaatataatgcgagtatgagagagaaagtt 8671583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 24798302 - 24798385
Alignment:
Q  3 ataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| || |||| |||  ||||||||||||||||| ||| ||| ||||| ||||||| |||||||| ||||||||||    
T  24798302 ataaagaaaaag-agatattgatataaaaatcaaaacaatagaaagagaaagtaaaaatataatgtgagtatgagagagaaagtt 24798385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 888199 - 888284
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| ||| |||| | ||||||| ||||  |||||| ||||||| |||||||| ||| || ||||| | ||||||||    
T  888199 ttataaagaaaaaatagatattgacacgaaaaccaaagtaatagagagataaaataaaatatcatgtgaatatgagaaagaaagtt 888284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 36110242 - 36110185
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||| || ||||||||| ||||||| |||||  ||||| ||||||||||||||||    
T  36110242 acgaaaaccataacaatagagagataaagtaaaaagtaatgtgagtatgaaagagaaa 36110185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 36531719 - 36531639
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| ||||   ||| |||||| ||||||||| ||||||| ||||| |||||  |||||||||||| ||||||    
T  36531719 aaagaaaaagtag-tattggcacggaaatcataacaatagagagataaagtaaaaaataatatgagtatgaaagaaaaagtt 36531639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 41701278 - 41701217
Alignment:
Q  14 gtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    ||||||||||  |||||||  ||||||||||||||||||| |||||  ||||| ||||||||    
T  41701278 gtaggtatttgcacgaaaactaaaacaatagatagataaagtaaaaattaatgtgagtatga 41701217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20080201 - 20080117
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||  ||| ||| |||||||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  20080201 ttataaagaaaaagtaggtatttgcacggaaaccaaaacaatagagagataaagtaaaa-ataatgtgagtatgagagagaaagtt 20080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49761436 - 49761351
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||||||  || |||| |||| ||||||| ||||||| ||||| |||||| |||||||| ||||||||||    
T  49761436 ttataaagaaaaagtaggtatttgcacaaaaaccaaagcaatagagagataaagtaaaaaataatgtgagtatgagagagaaagtt 49761351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 24095352 - 24095433
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||||||||||  ||||||| |||| ||||||| | ||||| ||||| |||||| |||||||| ||||||||||    
T  24095352 aaagaaaaagtaggtatttgcacgaaaaccaaagcaatagagaaataaagtaaaaaataatgtgagtatgagagagaaagtt 24095433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37927147 - 37927232
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| ||||||||| |||| ||| |||| ||||||| ||||||| ||||| || ||| |||||||| ||||||||||    
T  37927147 ttataaagaaaaaataggtatttgtacggaaaccaaagcaatagagagataaagtaaaaaattatgtgagtatgagagagaaagtt 37927232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 18741241 - 18741164
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    |||||| |||||| |||| |||||||||||||| ||||| | ||||||| ||||| |||||| ||||||||||||||||    
T  18741241 aaagaagaagtagatattgatacgaaaatcaaagcaataaagagataaaataaaa-ataatgtgagtatgaaagagaaa 18741164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 24482909 - 24482990
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| |||||||  ||||||| |||||||||| | ||||||| |||||  ||||| |||||||| ||||||||||    
T  24482909 aaagaaaaagttggtatttgcacgaaaaccaaaacaatatagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 24482990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29097496 - 29097581
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| || ||||| ||||||||| |||||||||||| |||| || |||||||| ||   ||||||| ||||||||||    
T  29097496 ttataaagaaaaaatatgtattgatacgaaaaccaaaacaatagagagatgaagtaaaatatcatataagtatgagagagaaagtt 29097581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 31376712 - 31376792
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||   |||||||||||| ||||||| ||||||| ||||| || ||| |||||||||||||||||||    
T  31376712 aaagaaaaaataggtattgc-acgaaaatcaaagcaatagagagataaagtaaaaaattatgtgagtatgaaagagaaagtt 31376792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 50206916 - 50206997
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | |||||  ||||||| |||||||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  50206916 aaagaaaaagttgatatttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 50206997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 55400128 - 55400043
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| | |||||||  ||||||| |||| ||||||| ||||||| |||||  ||||| |||||||| ||||||||||    
T  55400128 ttataaagaaaaaattggtatttgcacgaaaaccaaagcaatagagagataaagtaaaaagtaatgtgagtatgagagagaaagtt 55400043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 51465860 - 51465940
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagt 85  Q
    ||||||||||| |||||||  |||||||||||| ||||||| ||||||| |||||  ||||  |||||||| |||||||||    
T  51465860 aaagaaaaagttggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaagtaatatgagtatgagagagaaagt 51465940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 42683941 - 42683874
Alignment:
Q  16 aggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||  |||||||||||| ||||||| ||||||| ||||| |||||| | ||||||||||||||    
T  42683941 aggtatttgcacgaaaatcaaagcaatagagagataaagtaaaagataatgtgggtatgaaagagaaa 42683874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 1280075 - 1280152
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||| ||| ||||| ||||||||||||||||||| | ||||||| ||||| |||||| || ||||||| |||||    
T  1280075 aaagaaaaaatagttatttttacgaaaatcaaaacaatatagagataaa-taaaaaataatgtgaatatgaaatagaaa 1280152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8846620 - 8846538
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||||||||| || |||||| |||  ||| ||||||||| || ||||||| ||||| |||||| |||||||| |||||||    
T  8846620 ttataaagaaaaaataagtatttgtacagaaaccaaaacaatggagagataaagtaaaaaataatgtgagtatgagagagaaa 8846538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 3281662 - 3281743
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||||||| |||| |||| ||||| | ||||||| |||||  ||||| |||||| | ||||||||||    
T  3281662 aaagaaaaaataggtatttatacaaaaaccaaagcaataaagagataaagtaaaaagtaatgtgagtataagagagaaagtt 3281743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 11234316 - 11234235
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| |||||| || |||||||||| ||||||| ||||||| ||||| |||| | ||| |||| ||| ||||||    
T  11234316 aaagaaaaagtaagtatttgtatgaaaatcaaagcaatagagagataaaataaaaaataacgtgagaatgagagaaaaagtt 11234235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 21196249 - 21196168
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| || ||||||  ||||||||||||  |||||| ||||||| ||||| ||||||  ||||||| ||||||||||    
T  21196249 aaagaaaaaatatgtatttgcacgaaaatcaaagtaatagagagataaagtaaaaaataatgtaagtatgagagagaaagtt 21196168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 24645481 - 24645400
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| |||||| ||  ||||||| |||||||||||| ||||||| |||||  ||||| |||||||| ||| ||||||    
T  24645481 aaagaaaaaataggtacttgcacgaaaaccaaaacaatagagagataaagtaaaaagtaatgtgagtatgagagaaaaagtt 24645400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 26672523 - 26672447
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaa 82  Q
    |||||||||||| ||||||  ||  |||||||||||||||| ||||||| ||||| |||||| |||||||| ||||||    
T  26672523 aaagaaaaagtaagtatttgcacagaaatcaaaacaatagagagataaagtaaaa-ataatgtgagtatgagagagaa 26672447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34057895 - 34057980
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| |||| ||  ||||||| |||| ||||||| ||||||| |||||  ||| | |||||||| ||||||||||    
T  34057895 ttataaagaaaaagttggtaattgcacgaaaaacaaagcaatagaaagataaagtaaaaagtaacgtgagtatgagagagaaagtt 34057980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 45055098 - 45055018
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| |||||||| | |||||||||||| ||||||| |||| || ||||| || ||| ||||||||| |||||||||    
T  45055098 aaagaaaaaataggtatt-acacgaaaatcaaagcaatagagagatgaagtaaaaaatgatgtgagtatgaacgagaaagtt 45055018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 9158819 - 9158873
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    |||||||||||| ||||||| | | ||| |||||||||||||||||||| |||||    
T  9158819 aaagaaaaagtaagtatttacatggaaaccaaaacaatagatagataaagtaaaa 9158873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 24480397 - 24480463
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagt 71  Q
    |||||||||||||||||||  || |||| ||||  |||||||||||||| ||||| |||||| ||||    
T  24480397 aaagaaaaagtaggtatttgcacaaaaaccaaagtaatagatagataaagtaaaaaataatgtgagt 24480463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 32759846 - 32759923
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    |||| ||| ||| ||||||  |||||||||||||||| ||| | ||||| ||||| |||||| ||||||||||||||||    
T  32759846 aaagtaaaggtaagtatttgcacgaaaatcaaaacaacagagatataaagtaaaa-ataatgtgagtatgaaagagaaa 32759923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 33795671 - 33795725
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa 59  Q
    ||||||||||||  |||||||||| ||| |||||||||||| ||||||| |||||    
T  33795671 aaagaaaaagtaattatttatacggaaaacaaaacaatagagagataaagtaaaa 33795725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49167879 - 49167794
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||| |||| ||| | |||||| | ||||||| ||||||| ||||| ||||||| | |||||| ||||||||||    
T  49167879 ttataaagaaaaagtag-tattgatatggaaatcatagcaatagagagataaagtaaaaatataatgtgtgtatgagagagaaagtt 49167794  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50638293 - 50638367
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatga 75  Q
    |||||||||||| ||||||||||  ||| ||| |||| ||||||| ||||||| ||||| || ||| ||||||||    
T  50638293 ttataaagaaaatgtaggtatttgcacggaaaccaaagcaatagagagataaagtaaaaaattatgtgagtatga 50638367  T

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Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 54694058 - 54694140
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||| | |||||||||  |||||||||||| ||||||| ||||||| ||||| |||| | ||  |||| ||||||||||    
T  54694058 taaagaaagaataggtatttgcacgaaaatcaaagcaatagagagataaagtaaaaaataacgtgataatgagagagaaagtt 54694140  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3953417 - 3953502
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||| | |||||  | ||||| |||| ||||||| ||||| | |||||  ||||| |||||||| ||||||||||    
T  3953417 ttataaagaaaaagttgatatttgcatgaaaaccaaagcaatagagagatagagtaaaaagtaatgtgagtatgagagagaaagtt 3953502  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 19150289 - 19150346
Alignment:
Q  29 aaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||||||| ||| ||| ||||||||||||  | ||||| ||||||||||    
T  19150289 aaaatcaaaacaatagagagagaaagtaaaatataatgtaaatatgagagagaaagtt 19150346  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 34662111 - 34662050
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaact-aaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||||| |||| ||||||||| | ||||||||||| |||||||| ||| ||||||    
T  34662111 acgaaaatcaaaataataaatagataaagtaaaaatataatgtgagtatgagagataaagtt 34662050  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 46852078 - 46852159
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||||| | |||||  ||||||| |||||||||||| | ||||| |||||  ||||  |||||||| ||||||||||    
T  46852078 aaagaaaaagttgatatttgcacgaaaaccaaaacaatagacaaataaagtaaaaagtaatatgagtatgagagagaaagtt 46852159  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 52485577 - 52485516
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaa-tataatgcgagtatgaaagagaaagtt 86  Q
    ||||||| |||| ||||||| ||||||| ||||| ||||||| |||||||| ||||||||||    
T  52485577 acgaaaaccaaagcaatagagagataaagtaaaaatataatgtgagtatgacagagaaagtt 52485516  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 71989 - 72053
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataat 65  Q
    ||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| ||||| |||||    
T  71989 ttataaagaaaaaataggtatttacactaaaatcaaagcaatagaaagataaagtaaaaaataat 72053  T

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Target: scaffold0856 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0856
Description:

Target: scaffold0856; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 1976 - 2056
Alignment:
Q  4 taaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||| ||||||||  ||||||||||||| ||||||| ||||||| ||||| | |||| |||||||||||| ||||||    
T  1976 taaagaaaaaataggtattg-tacgaaaatcaaagcaatagagagataaa-taaaaaagaatgtgagtatgaaagaaaaagtt 2056  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 223426 - 223506
Alignment:
Q  5 aaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    ||||||||| ||||||||  ||||||||||||| ||||||| || |||| ||||| || ||| |||||||||| ||||||||    
T  223426 aaagaaaaaataggtattg-tacgaaaatcaaagcaatagagaggtaaagtaaaaaatgatgtgagtatgaaatagaaagtt 223506  T

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Target: scaffold0471 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 111 - 54
Alignment:
Q  26 acgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaa 83  Q
    ||||||| || ||||||||| ||||||| |||||  ||||| ||||||||||||||||    
T  111 acgaaaaccataacaatagagagataaagtaaaaagtaatgtgagtatgaaagagaaa 54  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41884 - 41799
Alignment:
Q  1 ttataaagaaaaagtaggtatttatacgaaaatcaaaacaatagatagataaactaaaatataatgcgagtatgaaagagaaagtt 86  Q
    |||||||||||| | || |||||  |||||||||||| ||||||| | ||||| ||||| || ||| ||| |||| ||||||||||    
T  41884 ttataaagaaaaggaagatatttgcacgaaaatcaaagcaatagagaaataaagtaaaaaattatgtgagaatgagagagaaagtt 41799  T

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