View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3857_high_34 (Length: 340)
Name: NF3857_high_34
Description: NF3857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3857_high_34 |
 | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 300; Significance: 1e-169; HSPs: 27)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 18 - 329
Target Start/End: Original strand, 4592750 - 4593061
Alignment:
| Q |
18 |
attcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4592750 |
attcataactgtaaggctgccgaaattcacataaacaacggaacccgattccttcgattcaagccatttaagacactcagtatcttctttccatatgttg |
4592849 |
T |
|
| Q |
118 |
gaaccaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcat |
217 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592850 |
gaaccaaaagaatccaattgatggatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcat |
4592949 |
T |
|
| Q |
218 |
ttattacatcactctcaagttcattgaaagtattcaaaataatagtagagtttttatgatctttatcagccacatcaattacaaagtttaacataatatc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592950 |
ttattacatcactctcaagttcattgaaagtattcaaaataatagtagagtttttatgatctttatcagccacatcaattacaaagtttaacataatatc |
4593049 |
T |
|
| Q |
318 |
atttggatctgt |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4593050 |
atttggatctgt |
4593061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 329
Target Start/End: Original strand, 4564232 - 4564541
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| ||| || |||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||| | ||||||||||||| | |||||| |
|
|
| T |
4564232 |
tcataactgtaatgcttccaaaattcacataaacaacggatcccggctccttggattcaagccattcaagacacttagtatcttctttccaaaggttgga |
4564331 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564332 |
acctaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
4564431 |
T |
|
| Q |
220 |
attacatcactctcaagttcattgaaagtattcaaaataatagtagagtttttatgatctttatcagccacatcaattacaaagtttaacataatatcat |
319 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||| ||| ||||||| | | || ||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
4564432 |
attacatcactctaaagttcatggaaagtattcaaaacaattgtagagtctccaagaactttatcagccgcatcaattacaaagtctaacataatatcat |
4564531 |
T |
|
| Q |
320 |
ttggatctgt |
329 |
Q |
| |
|
|||||||||| |
|
|
| T |
4564532 |
ttggatctgt |
4564541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 20 - 265
Target Start/End: Original strand, 4617543 - 4617788
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| || ||||| ||||| ||||||||||| | ||||||||| ||||||||||||| | |||||| |
|
|
| T |
4617543 |
tcataactgtaatgctgccgaaattcacataaacaactgatcccggctccttggattcaagccaatcaagacactctgtatcttctttccaaaggttgga |
4617642 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||| | ||||||||||||||| |
|
|
| T |
4617643 |
atctaaagagtccaattgatgaatttgtggagtttgttttaataatgaaggtaaagggccaatcggataaatagaaggaattgtggaggagagagcattt |
4617742 |
T |
|
| Q |
220 |
attacatcactctcaagttcattgaaagtattcaaaataatagtag |
265 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4617743 |
attacatcactctcaagttcattgaaagtattcaaaagaatagtag |
4617788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 4602310 - 4602558
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||||||| | |||||| |
|
|
| T |
4602310 |
tcataactgtaatgctgccaaaattcacataaacaacggatcccggctccttggattcaagccattcaagacactcagtatcttctttccagaggttgga |
4602409 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
||| ||| | |||||||||||||||||||||||||| |||||||||||| | ||||| || || | || | |||||| |||||||| | || ||||| |
|
|
| T |
4602410 |
acctaaacagtccaattgatgaatttgtggagtttgatttaataatgaatgcaaaggtccgatagtatataaagaagggaacatagaatatagtgcattc |
4602509 |
T |
|
| Q |
220 |
attacatcactctcaagttcattgaaagtattcaaaataatagtagagt |
268 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
4602510 |
attacatcactctcaagttcattgtaagtattcaaaagaatagtagagt |
4602558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 262
Target Start/End: Complemental strand, 4299432 - 4299193
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||| || ||||| ||||| ||||||||||||| |||||| | ||||||||||||| | ||||| |
|
|
| T |
4299432 |
tcataactgtaacgctgccaaaattcacataaacaaccgatcccggctccttggattcaagccattcaagacatttggtatcttctttccaaagattgga |
4299333 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
||| ||||| ||||| |||| | ||||||||||| |||||||||||||||||||| ||||| | || | |||||| |||||||| |||||||||| |
|
|
| T |
4299332 |
acctaaagattccaagtgatta---tgtggagtttgatttaataatgaaggtaaaggtccaatagtatataaagaagggaacatagaatagagagcattc |
4299236 |
T |
|
| Q |
220 |
attacatcactctcaagttcattgaaagtattcaaaataatag |
262 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
4299235 |
attacatcactctcaagttcatcataagtattaaaaacaatag |
4299193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 4259765 - 4259547
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| |||||| |||||||| |||||||| || | |||||||| |||||||||||| |||||| | ||||||||||||| | ||||| |
|
|
| T |
4259765 |
tcataactgtaatgctgccaaaattcacgtaaacaacagactcaggttccttaaattcaagccattcaagacatttggtatcttctttccaaagattgga |
4259666 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
||| || || ||| |||| | ||||||||||| |||||||||||||||||||| ||||| | || | |||||| |||||||| |||| |||| |
|
|
| T |
4259665 |
acctaacgatgccaggtgatta---tgtggagtttgatttaataatgaaggtaaaggtccaatagcatataaagaagggaacatagaatagagcacattc |
4259569 |
T |
|
| Q |
220 |
attacatcactctcaagttcat |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4259568 |
attacatcactctcaagttcat |
4259547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 4256235 - 4256074
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| |||||| |||||||| |||||||| || | |||||||| ||||||||||||| |||||||| ||||||||||||| | ||||| |
|
|
| T |
4256235 |
tcataactgtaatgctgccaaaattcacgtaaacaacagactcaggttccttggattcaagccattcaagacacttggtatcttctttccaaagattgga |
4256136 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatgg |
184 |
Q |
| |
|
||| || || |||| ||| | ||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
4256135 |
acctaacgatgccaa---gtgactatgtggagtttgatttaataatgaaggtaaaggtccaatgg |
4256074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 4622663 - 4622905
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||| ||||||| |||||| |||||||| ||||||| || | |||||||| ||||||||||| | |||||||| |||||||||||||| | ||||| |
|
|
| T |
4622663 |
tcatcactgtaatgctgccaaaattcacgtaaacaa--gagtcaggttccttggattcaagccactcaagacacttgatatcttctttccaaagattgga |
4622760 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
||| | ||| |||| |||| | ||||||||||| |||||||||||||||||||| |||| || || | ||| || ||||| || |||| ||||| |
|
|
| T |
4622761 |
acctagagatgccaagtgatta---tgtggagtttgatttaataatgaaggtaaaggtccaacggtatacaaagatgggaacattgaatagagcgcattc |
4622857 |
T |
|
| Q |
220 |
attacatcactctcaagttcattgaaagtattcaaaataatagtagag |
267 |
Q |
| |
|
|| ||||| ||||||||||||| ||||||| |||||||||| |||| |
|
|
| T |
4622858 |
atcgcatcagtctcaagttcattataagtattaaaaataatagcagag |
4622905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 262
Target Start/End: Complemental strand, 4514712 - 4514493
Alignment:
| Q |
40 |
aaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatccaattgat |
139 |
Q |
| |
|
||||| ||||||||||| || || | ||| || ||||||||||||| |||||| | | ||||||||||||| | |||||||| ||||| ||||| |||| |
|
|
| T |
4514712 |
aaattaacataaacaacagatcctgattcttttgattcaagccattcaagacatttagtatcttctttccaaagattggaacctaaagattccaagtgat |
4514613 |
T |
|
| Q |
140 |
gaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactctcaagttc |
239 |
Q |
| |
|
|||||||| |||| || || || |||| || |||||||||| ||| |||||||| | |||||| | |||||||| || |||||||||||||| || |
|
|
| T |
4514612 |
---tttgtggactttgattcaaaaacgaagcaaatgggccaatggtgtatagagaagggagcatagaataaagagcattcataacatcactctcaagatc |
4514516 |
T |
|
| Q |
240 |
attgaaagtattcaaaataatag |
262 |
Q |
| |
|
||| ||||||| |||| ||||| |
|
|
| T |
4514515 |
attagaagtatttaaaaaaatag |
4514493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 241
Target Start/End: Complemental strand, 4266776 - 4266559
Alignment:
| Q |
21 |
cataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaa |
120 |
Q |
| |
|
||||||||| | ||| || ||||| ||||||||||| || | ||||| || ||||||||||| | |||||| | | ||||||||||||| | |||||| |
|
|
| T |
4266776 |
cataactgtgatgctaccaaaatttacataaacaacagatcttggttcttttgattcaagccactcaagacatttagtatcttctttccaaagattggaa |
4266677 |
T |
|
| Q |
121 |
ccaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattta |
220 |
Q |
| |
|
||||| |||| |||| |||||||| |||| ||||| || |||| || |||||||||| ||| | |||||| ||||||||| |||||||||| | |
|
|
| T |
4266676 |
tttaaagatgccaagtgat---tttgtggactttgatttaaaaaagaagcaaatgggccaatggtgtatatagaagggaacatagagtagagagcattca |
4266580 |
T |
|
| Q |
221 |
ttacatcactctcaagttcat |
241 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
4266579 |
taacatcactctcaagttcat |
4266559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 268
Target Start/End: Original strand, 4586177 - 4586402
Alignment:
| Q |
40 |
aaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatccaattgat |
139 |
Q |
| |
|
|||||||||||||||||||| | ||||||||| ||||||||||| | |||||||| |||| |||||||| | || | || ||||| | || || | |
|
|
| T |
4586177 |
aaattcacataaacaacggacctcggttcctttgattcaagccaatcaagacacttggtatcctctttccaaagatttgtacttaaagatgctaagtggt |
4586276 |
T |
|
| Q |
140 |
gaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactctcaagttc |
239 |
Q |
| |
|
|||||||| |||| ||||| ||||| | |||||||||||||| |||| |||||| ||| ||| ||||||| ||||||||||||| |||||||||| |
|
|
| T |
4586277 |
---tttgtggactttgatttaaaaatgatgataaagggccaatggcataaatagaagggaacttagtggagagaacatttattacatccttctcaagttc |
4586373 |
T |
|
| Q |
240 |
attgaaagtattcaaaataatagtagagt |
268 |
Q |
| |
|
|| ||||||| ||||||| || ||||| |
|
|
| T |
4586374 |
atcagaagtattaaaaataaaagcagagt |
4586402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 262
Target Start/End: Original strand, 4516862 - 4517081
Alignment:
| Q |
40 |
aaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatccaattgat |
139 |
Q |
| |
|
|||||||||||||| || ||||| ||||||| ||||||||||||| |||||| | |||||||||||||| | || ||||| | |||| |||| | || |
|
|
| T |
4516862 |
aaattcacataaactacagaaccttgttccttagattcaagccattcaagacatttcatatcttctttccaaagattagaacctatagaagccaagttat |
4516961 |
T |
|
| Q |
140 |
gaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactctcaagttc |
239 |
Q |
| |
|
|||| ||| |||| || || ||||||| |||||||||||||| |||| |||||| | | || || |||||||||||||||||| |||||||||| |
|
|
| T |
4516962 |
---tttgcggactttgattcaaaaatgaagttaaagggccaatggcataaatagaagggatcttaatagatagagcatttattacatcattctcaagttc |
4517058 |
T |
|
| Q |
240 |
attgaaagtattcaaaataatag |
262 |
Q |
| |
|
|| ||||||| |||| ||||| |
|
|
| T |
4517059 |
atcagaagtattgaaaacaatag |
4517081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 242
Target Start/End: Original strand, 4598712 - 4598911
Alignment:
| Q |
40 |
aaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatccaattgat |
139 |
Q |
| |
|
||||||||||||||||| || | ||||| || ||||||||||| | |||||||| ||||||||||||| | |||| ||| ||||| |||| || | |
|
|
| T |
4598712 |
aaattcacataaacaacagaccttggttcattggattcaagccagtcaagacacttggtatcttctttccaaagattggtacctaaagatgccaaatgct |
4598811 |
T |
|
| Q |
140 |
gaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactctcaagttc |
239 |
Q |
| |
|
||||| || |||| ||||| || |||| |||||||||||||| |||| | |||| |||||| ||||||| |||| | ||||||| |||||||||| |
|
|
| T |
4598812 |
---tttgttgactttgatttaaaaacgaagataaagggccaatggcataaatacaagggaacatactggagagaacattcaatacatcattctcaagttc |
4598908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 4557646 - 4557736
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttcca |
110 |
Q |
| |
|
|||||||||| | ||| || |||||||||||||||||||| | ||||||||| ||||||||||| |||||||| ||||||||||||| |
|
|
| T |
4557646 |
tcataactgtcatgctcccaaaattcacataaacaacggacctcggttccttggattcaagccaaccaagacacttgttatcttctttcca |
4557736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 4571513 - 4571583
Alignment:
| Q |
40 |
aaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttcca |
110 |
Q |
| |
|
|||||||||||||||||||| | ||||||||| ||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
4571513 |
aaattcacataaacaacggacctcggttcctttgattcaagccaatcaagacacttgttatcttctttcca |
4571583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 251
Target Start/End: Original strand, 4561038 - 4561253
Alignment:
| Q |
33 |
gctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatcc |
132 |
Q |
| |
|
|||||| ||||| ||||||||||| || || ||||| || ||||||||||||| |||||| | | ||||||||||||| | || | | ||||| | |
|
|
| T |
4561038 |
gctgccaaaatttacataaacaacagatcctggttcttttgattcaagccattcaagacatttagtatcttctttccaaagattacagtctaaagatgtc |
4561137 |
T |
|
| Q |
133 |
aattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactct |
232 |
Q |
| |
|
|| |||| |||||||| |||| |||| || |||| ||| || ||||| | ||| |||||||| |||||||| ||| |||||| || |||||||||| |
|
|
| T |
4561138 |
aagtgat---tttgtggactttgatttacaaaagaagctaatggaccaattgtgtatagagaagggaacatagaatagaaagcattcataacatcactct |
4561234 |
T |
|
| Q |
233 |
caagttcattgaaagtatt |
251 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
4561235 |
caagttcattagaagtatt |
4561253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 4470325 - 4470563
Alignment:
| Q |
21 |
cataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaa |
120 |
Q |
| |
|
||||||||| | |||||||||||| ||||| ||||| || || ||||| || ||||||||||| | |||||| | | ||||||||||||| | ||| || |
|
|
| T |
4470325 |
cataactgtgacgctgccgaaatttacatagacaacagatcctggttcttttgattcaagccactcaagacatttagtatcttctttccaaagattgaaa |
4470424 |
T |
|
| Q |
121 |
ccaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattta |
220 |
Q |
| |
|
||||| | | ||||| |||||||| |||| ||||| || |||| | || ||||||| ||| |||||||| || ||||| |||| |||| | |
|
|
| T |
4470425 |
tttaaagatgc---tagatgattttgtggactttgatttaaaaaagaagaaagtggaccaatggcgtatagagaagggaatatagaatagagttcattca |
4470521 |
T |
|
| Q |
221 |
ttacatcactctcaagttcattgaaagtattcaaaataatag |
262 |
Q |
| |
|
| |||||||| ||||||||||| |||||||||||| ||||| |
|
|
| T |
4470522 |
taacatcactttcaagttcattagaagtattcaaaacaatag |
4470563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 262
Target Start/End: Original strand, 4568642 - 4568804
Alignment:
| Q |
97 |
atatcttctttccatatgttggaaccaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaag |
196 |
Q |
| |
|
|||||||||||||| | |||||||| |||||| |||| || | |||| ||| |||| || || || |||| |||||||||||||| ||||| ||||| |
|
|
| T |
4568642 |
atatcttctttccaaagattggaacctaaagaagccaagtgct---tttggggattttgattcaaaaacgaagataaagggccaatggcgtaaatagaag |
4568738 |
T |
|
| Q |
197 |
gaaacatagaggagagagcatttattacatcactctcaagttcattgaaagtattcaaaataatag |
262 |
Q |
| |
|
| | | || || ||||| |||| ||||||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
4568739 |
ggatcttaatagatagagcctttactacatcactctcaagttcattataagtattgaaaacaatag |
4568804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 4458268 - 4458334
Alignment:
| Q |
175 |
gggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactctcaagttcat |
241 |
Q |
| |
|
|||||||||| ||| | |||||| ||||||||| |||||| ||| || ||||||||||||||||||| |
|
|
| T |
4458268 |
gggccaatggtgtatatagaagggaacatagagtagagagtattcataacatcactctcaagttcat |
4458334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 4461644 - 4461734
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttcca |
110 |
Q |
| |
|
|||||||||| | |||||| ||||| ||||| ||||| || || ||||| || ||||||||||||| |||||| | | ||||||||||||| |
|
|
| T |
4461644 |
tcataactgtgatgctgccaaaatttacatagacaacagatcctggttcttttgattcaagccattcaagacatttagtatcttctttcca |
4461734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 241
Target Start/End: Original strand, 4481227 - 4481432
Alignment:
| Q |
33 |
gctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatcc |
132 |
Q |
| |
|
|||||| ||||| ||||||||||| || || ||||| || ||||||||||||| |||||| | | ||||||||||||| | || || | || | ||| |
|
|
| T |
4481227 |
gctgccaaaatttacataaacaacagatcctggttcttttgattcaagccattcaagacatttagtatcttctttccaaagattagagtctaatgtttcc |
4481326 |
T |
|
| Q |
133 |
aattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactct |
232 |
Q |
| |
|
|| |||| ||||||| |||| ||||| || |||| || || ||||||| ||| |||||||| || ||||| |||||| ||| || |||||||||| |
|
|
| T |
4481327 |
aagtgat---attgtggactttgatttaaaaaagaagccaatggaccaatggtgtatagagaagggaatatagaatagagagaattcataacatcactct |
4481423 |
T |
|
| Q |
233 |
caagttcat |
241 |
Q |
| |
|
||||||||| |
|
|
| T |
4481424 |
caagttcat |
4481432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 4579953 - 4580043
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttcca |
110 |
Q |
| |
|
|||||||||| | ||| || ||||||||||||||||| || | |||||||| ||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
4579953 |
tcataactgtcaagctcccaaaattcacataaacaacagacctaggttccttggattcaagccaataaagacacttggtatcttctttcca |
4580043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 4613309 - 4613239
Alignment:
| Q |
40 |
aaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttcca |
110 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||| | |||||||| ||||||||||||| |
|
|
| T |
4613309 |
aaattcacataaacaacggacttcggttccttggattcaagccaatcaagacacttggtatcttctttcca |
4613239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 4489953 - 4489876
Alignment:
| Q |
33 |
gctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttcca |
110 |
Q |
| |
|
|||||| ||||| ||||||||||| || || ||||| || ||||||||||||| |||||| | | ||||||||||||| |
|
|
| T |
4489953 |
gctgccaaaatttacataaacaacagatcctggttcttttgattcaagccattcaagacatttagtatcttctttcca |
4489876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 4504007 - 4503918
Alignment:
| Q |
21 |
cataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttcca |
110 |
Q |
| |
|
||||||||||| |||||| ||||| ||||||||||| || || ||||| || |||||||||| | |||||| | | ||||||||||||| |
|
|
| T |
4504007 |
cataactgtaatgctgccaaaatttacataaacaacagatcctggttcttttaattcaagccaatcaagacatttagtatcttctttcca |
4503918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 251
Target Start/End: Original strand, 4574949 - 4575057
Alignment:
| Q |
143 |
tttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactctcaagttcatt |
242 |
Q |
| |
|
|||||||| |||| |||| || |||| ||| || ||||| | ||| |||||||| |||||||| ||| |||||| || |||||||||||||||||||| |
|
|
| T |
4574949 |
tttgtggactttgatttacaaaagaagctaatggaccaattgtgtatagagaagggaacatagaatagaaagcattcataacatcactctcaagttcatt |
4575048 |
T |
|
| Q |
243 |
gaaagtatt |
251 |
Q |
| |
|
||||||| |
|
|
| T |
4575049 |
agaagtatt |
4575057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 4506398 - 4506559
Alignment:
| Q |
40 |
aaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatccaattgat |
139 |
Q |
| |
|
||||||||||||||||| ||| ||||||| || ||||| ||||||| ||||| | | |||| |||||||| | || ||| | |||| | || |||| |
|
|
| T |
4506398 |
aaattcacataaacaacagaagccggttcttttgattccagccattcgagacatttagtatcctctttccaaagatttgaatctaaagttgcaaactgat |
4506497 |
T |
|
| Q |
140 |
gaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacata |
204 |
Q |
| |
|
|||||||| |||| |||| ||||||| |||||||||||| | ||| ||||||||||||||| |
|
|
| T |
4506498 |
---tttgtggactttgatttacaaatgaagttaaagggccaatagtgtatagagaaggaaacata |
4506559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 20 - 326
Target Start/End: Original strand, 1674747 - 1675054
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||||||| || |||||||| || ||||||||||||| |||||||||| ||||||||||||| | |||||| |
|
|
| T |
1674747 |
tcataacaataatgctaccgaaattcacataaacaaccgatcccggttcgttggattcaagccattcaagacactcagtatcttctttccaaaggttgga |
1674846 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagagga-gagagcatt |
218 |
Q |
| |
|
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | |
|
|
| T |
1674847 |
acctaaagattctaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacaaagaggaggagagcggt |
1674946 |
T |
|
| Q |
219 |
tattacatcactctcaagttcattgaaagtattcaaaataatagtagagtttttatgatctttatcagccacatcaattacaaagtttaacataatatca |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| | | ||| |||||||||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
1674947 |
tattacatcactctcaagttcattgaaagtattcaaaataattgtagagtctctgtgaactttatcagcgacatcaattaaaaagtctaacataatatca |
1675046 |
T |
|
| Q |
319 |
tttggatc |
326 |
Q |
| |
|
|||||||| |
|
|
| T |
1675047 |
tttggatc |
1675054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 34 - 267
Target Start/End: Complemental strand, 20863440 - 20863210
Alignment:
| Q |
34 |
ctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatcca |
133 |
Q |
| |
|
||||| ||||| ||||| |||| || |||||||| ||||||||||||||| |||||| ||| | ||||||||||| | | ||| | ||||| ||| |
|
|
| T |
20863440 |
ctgccaaaatttacatatacaatagatcccggttctttcgattcaagccatgcaagacattcagtgtcttctttccaaagacttgaatctaaagacgcca |
20863341 |
T |
|
| Q |
134 |
attgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactctc |
233 |
Q |
| |
|
| |||| | |||||| |||| ||||| || ||| ||||||||||||| ||| |||||||| |||||||| ||||| |||| || ||||||||||| |
|
|
| T |
20863340 |
agtgat---tctgtggactttgatttaaaaaagaaacaaaagggccaatggtgtatagagaagggaacatagaatagagaacattcataacatcactctc |
20863244 |
T |
|
| Q |
234 |
aagttcattgaaagtattcaaaataatagtagag |
267 |
Q |
| |
|
||| |||||||||||||| |||| ||||| |||| |
|
|
| T |
20863243 |
aagctcattgaaagtattgaaaacaatagcagag |
20863210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 16685878 - 16685804
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacact |
94 |
Q |
| |
|
|||||||||| | ||| || |||||||||||||||||||||| ||||||||| ||||||||||| | |||||||| |
|
|
| T |
16685878 |
tcataactgtcatgctcccaaaattcacataaacaacggaactcggttccttggattcaagccaatcaagacact |
16685804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 37 - 326
Target Start/End: Original strand, 1 - 291
Alignment:
| Q |
37 |
ccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaaccaaaagaatccaatt |
136 |
Q |
| |
|
|||||||||||||||||||| || |||||||| || ||||||||||||| |||||||||| ||||||||||||| | ||||||||| ||||| || |||| |
|
|
| T |
1 |
ccgaaattcacataaacaaccgatcccggttcgttggattcaagccattcaagacactcagtatcttctttccaaaggttggaacctaaagattctaatt |
100 |
T |
|
| Q |
137 |
gatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagagga-gagagcatttattacatcactctcaa |
235 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| |
|
|
| T |
101 |
gatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacaaagaggaggagagcggttattacatcactctcaa |
200 |
T |
|
| Q |
236 |
gttcattgaaagtattcaaaataatagtagagtttttatgatctttatcagccacatcaattacaaagtttaacataatatcatttggatc |
326 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| | | ||| |||||||||| |||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
201 |
gttcattgaaagtattcaaaataattgtagagtctctgtgaactttatcagcgacatcaattaaaaagtctaacataatatcatttggatc |
291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 1281635 - 1281883
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||| || | ||||||||||||||||||||||| ||||||||| |||||||||||||| | |||||| |
|
|
| T |
1281635 |
tcataactgtaatgcttccgaaattcacataaacaacagatctcggttccttcgattcaagccattgaagacactcgatatcttctttccaaaggttgga |
1281734 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| |
|
|
| T |
1281735 |
atctaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatcgggtaaacagaaggaattatagaggagagagcattt |
1281834 |
T |
|
| Q |
220 |
attacatcactctcaagttcattgaaagtattcaaaataatagtagagt |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1281835 |
attacatcactctcaagttcattgaaagtattcaaaagaatagtagagt |
1281883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 3330 - 3110
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| || | |||||||| ||||| ||||||| |||||||| ||||||||||||| | ||||| |
|
|
| T |
3330 |
tcataactgtaatgctgccgaaattcacataaacaacagactcaggttccttggattcgagccattcaagacacttggtatcttctttccaaagattgga |
3231 |
T |
|
| Q |
120 |
acc-aaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatt |
218 |
Q |
| |
|
||| |||||| ||||| |||| | ||||||||||| |||||||||||||||| || || || ||| | || || ||||||||| ||| ||||| |
|
|
| T |
3230 |
acctaaaagattccaagtgat---tatgtggagtttgacttaataatgaaggtaatggtccgatactgtataatgatgggaacatagagtggagcgcatt |
3134 |
T |
|
| Q |
219 |
tattacatcactctcaagttcatt |
242 |
Q |
| |
|
| ||||||||||||||||||||| |
|
|
| T |
3133 |
cagtacatcactctcaagttcatt |
3110 |
T |
|
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Target: scaffold0477 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 263
Target Start/End: Complemental strand, 4297 - 4060
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| ||| || ||||||||||||||||| || | |||||||| ||| ||||||| | |||||||| ||||||||||||| | ||||| |
|
|
| T |
4297 |
tcataactgtaatgcttccaaaattcacataaacaaccgactcaggttccttggatgcaagccactcaagacacttggtatcttctttccaaagattgga |
4198 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
||| ||||| || ||| | ||||||||||| ||||||||||||| |||||| ||||||| || | |||||| |||||||| |||||||||| |
|
|
| T |
4197 |
acctaaaga------ttagtgattatgtggagtttgatttaataatgaagttaaaggtccaatggtatataaagaagggaacatagaatagagagcattc |
4104 |
T |
|
| Q |
220 |
attacatcactctcaagttcattgaaagtattcaaaataatagt |
263 |
Q |
| |
|
| |||| | ||||||||||||| | |||| || |||| |||||| |
|
|
| T |
4103 |
aatacaccgctctcaagttcatcgtaagtgttgaaaacaatagt |
4060 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 241
Target Start/End: Original strand, 24103521 - 24103738
Alignment:
| Q |
21 |
cataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttggaa |
120 |
Q |
| |
|
||||||||| | ||| || ||||| ||||||||||| || | ||||| || ||||||||||| | |||||| | | ||||||||||||| | |||||| |
|
|
| T |
24103521 |
cataactgtgatgctaccaaaatttacataaacaactgatcttggttcttttgattcaagccactcaagacatttagtatcttctttccaaagattggaa |
24103620 |
T |
|
| Q |
121 |
ccaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattta |
220 |
Q |
| |
|
||||| |||| |||| |||||||| |||| ||||| || |||| || |||||||||| ||| | |||||| ||||||||| |||||||||| | |
|
|
| T |
24103621 |
tttaaagatgccaagtgat---tttgtggactttgatttaaaaaagaagcaaatgggccaatggtgtatatagaagggaacatagagtagagagcattca |
24103717 |
T |
|
| Q |
221 |
ttacatcactctcaagttcat |
241 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
24103718 |
taacatcactctcaagttcat |
24103738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 24107025 - 24107114
Alignment:
| Q |
152 |
tttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcatttattacatcactctcaagttcat |
241 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| | || | | |||| |||||||| |||| | ||| |||||||||||||||||||||| |
|
|
| T |
24107025 |
tttgatttaataatgaaggtaaaggtccaatagtatataaaaaagggaacatagaatagagcgtattcattacatcactctcaagttcat |
24107114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 3086941 - 3087159
Alignment:
| Q |
20 |
tcataactgtaaggctgccgaaattcacataaacaacggaacccggttccttcgattcaagccatttaagacactcaatatcttctttccatatgttgga |
119 |
Q |
| |
|
|||||||||||| |||||| ||| ||||||||||||| || | || |||| ||||||||||||| |||||||| ||||||||||||| | ||||| |
|
|
| T |
3086941 |
tcataactgtaatgctgccaaaactcacataaacaacagactcaagtccctttgattcaagccattcaagacacttggtatcttctttccaaagattgga |
3087040 |
T |
|
| Q |
120 |
accaaaagaatccaattgatgaatttgtggagtttggtttaataatgaaggtaaagggccaatggggtaaagagaaggaaacatagaggagagagcattt |
219 |
Q |
| |
|
||| ||||| |||| |||| | |||| |||||| |||| || ||||||||| || ||||||| || | ||||| |||| ||| | || ||||| |
|
|
| T |
3087041 |
acctaaagatgccaagtgat---tatgtgaagtttgatttagtagtgaaggtaatggtccaatggtatataatgaagggaacacagaatatagcgcattc |
3087137 |
T |
|
| Q |
220 |
attacatcactctcaagttcat |
241 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
3087138 |
attacatcactctcaagttcat |
3087159 |
T |
|
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