View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3857_high_65 (Length: 239)

Name: NF3857_high_65
Description: NF3857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3857_high_65
NF3857_high_65
[»] chr4 (6 HSPs)
chr4 (19-239)||(46057861-46058082)
chr4 (127-166)||(13770661-13770700)
chr4 (129-170)||(13015581-13015622)
chr4 (127-171)||(26564676-26564720)
chr4 (126-170)||(30021605-30021649)
chr4 (127-179)||(37246701-37246753)
[»] chr3 (6 HSPs)
chr3 (86-166)||(37442924-37443004)
chr3 (127-181)||(31127000-31127054)
chr3 (127-181)||(55438885-55438939)
chr3 (117-170)||(55225280-55225333)
chr3 (127-171)||(19111574-19111618)
chr3 (127-171)||(34119497-34119541)
[»] chr1 (8 HSPs)
chr1 (121-171)||(39921714-39921764)
chr1 (117-170)||(9681956-9682009)
chr1 (123-168)||(34524203-34524248)
chr1 (127-181)||(9983095-9983149)
chr1 (127-181)||(44632341-44632395)
chr1 (127-171)||(12494850-12494894)
chr1 (127-167)||(17134790-17134830)
chr1 (127-167)||(45866391-45866431)
[»] chr7 (4 HSPs)
chr7 (127-181)||(12980210-12980264)
chr7 (127-181)||(16078847-16078901)
chr7 (127-171)||(18826077-18826121)
chr7 (126-170)||(26874210-26874254)
[»] chr6 (3 HSPs)
chr6 (127-171)||(7394092-7394136)
chr6 (127-171)||(14411038-14411082)
chr6 (127-171)||(14505925-14505969)
[»] chr8 (3 HSPs)
chr8 (123-170)||(35139326-35139373)
chr8 (127-181)||(1012446-1012500)
chr8 (127-181)||(34139276-34139330)
[»] chr2 (2 HSPs)
chr2 (126-181)||(16226931-16226986)
chr2 (127-171)||(31942391-31942435)
[»] scaffold0014 (1 HSPs)
scaffold0014 (127-181)||(14350-14404)
[»] chr5 (4 HSPs)
chr5 (127-181)||(33862389-33862443)
chr5 (127-181)||(35194195-35194249)
chr5 (127-167)||(1218599-1218639)
chr5 (127-171)||(30115322-30115366)
[»] scaffold0027 (1 HSPs)
scaffold0027 (127-171)||(6245-6289)


Alignment Details
Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 46058082 - 46057861
Alignment:
Q  19 actcatgcagccatagtgtatctatcatatgatactcactcgagctctctctcttcgtcatcatattcatagccatcaatctccatcatctcacactctc 118  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  46058082 actcatgcagccgtagtgtatctatcatatgatactcactcgagctctctctcttcttcatcatattcatagccatcgatctccatcatctcacactctc 46057983  T
Q  119 gattaatgaaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggtga-nnnnnnnaataaaataaattattcattgcatgaa 217  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||    
T  46057982 ggttaacgaaatgttaaagtgaacatattattgaataatacattacaacatttttcttggggtgattttttttaataaaataaattattcattgcatgaa 46057883  T
Q  218 cgagaatgagacgaaaatcccc 239  Q
    ||||||||||||||||||||||    
T  46057882 cgagaatgagacgaaaatcccc 46057861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 13770661 - 13770700
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaa 166  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  13770661 aaatgttaaagtgaacatattgttggataatacattacaa 13770700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 13015581 - 13015622
Alignment:
Q  129 atgttaaagtgaacatattattgaataatacattacaacatt 170  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  13015581 atgttaaagtgaacatattattggataatgtattacaacatt 13015622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 26564720 - 26564676
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    ||||||||||||||||||||| ||| ||||| |||||||| ||||    
T  26564720 aaatgttaaagtgaacatattgttggataatgcattacaatattt 26564676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 30021605 - 30021649
Alignment:
Q  126 gaaatgttaaagtgaacatattattgaataatacattacaacatt 170  Q
    ||||||||||| | | |||||||||||||||| ||||||||||||    
T  30021605 gaaatgttaaaataagcatattattgaataatgcattacaacatt 30021649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 37246753 - 37246701
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggg 179  Q
    |||||||||||||| ||||||| || ||||||||||| |||||| ||| ||||    
T  37246753 aaatgttaaagtgagcatattactgcataatacattataacattattcccggg 37246701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 37442924 - 37443004
Alignment:
Q  86 catagccatcaatctccatcatctcacactctcgattaatgaaatgttaaagtgaacatattattgaataatacattacaa 166  Q
    |||| |||||||| | ||| ||||||| |||||| | |||||||||||||| |||||||||||||||||||||||| ||||    
T  37442924 cataaccatcaatatacattatctcacgctctcggtcaatgaaatgttaaaatgaacatattattgaataatacataacaa 37443004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 31127000 - 31127054
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    |||||||||||||| |||||| ||| ||||| ||||||||||||| ||| |||||    
T  31127000 aaatgttaaagtgagcatattgttggataatgcattacaacatttctctaggggt 31127054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 55438885 - 55438939
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||| ||| |||||    
T  55438885 aaatgttaaaataaacatattgttgaataatgcattacaacatttctctaggggt 55438939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 55225280 - 55225333
Alignment:
Q  117 tcgattaatgaaatgttaaagtgaacatattattgaataatacattacaacatt 170  Q
    ||||||||  |||||||||||||||||||||  || ||||| ||||||||||||    
T  55225280 tcgattaaaaaaatgttaaagtgaacatattgatggataatgcattacaacatt 55225333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 19111618 - 19111574
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||    
T  19111618 aaatgttaaagtgatcatattgttggataatgcattacaacattt 19111574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 34119541 - 34119497
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||    
T  34119541 aaatgttaaagtgagcatattgttggataatgcattacaacattt 34119497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 39921764 - 39921714
Alignment:
Q  121 ttaatgaaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  39921764 ttaatgaaatgttaaagtgaacatattattggataacgcattacaacattt 39921714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 9681956 - 9682009
Alignment:
Q  117 tcgattaatgaaatgttaaagtgaacatattattgaataatacattacaacatt 170  Q
    ||||| || ||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9681956 tcgatcaaagaaatgttaaagtgagcatattgttggataatacattacaacatt 9682009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 34524203 - 34524248
Alignment:
Q  123 aatgaaatgttaaagtgaacatattattgaataatacattacaaca 168  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  34524203 aatgaaatgttaaagtgaacatattattcgataatgcattacaaca 34524248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 9983095 - 9983149
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    |||||||||||||| ||||||  || ||||||||||||||||||| ||| |||||    
T  9983095 aaatgttaaagtgagcatattgctggataatacattacaacatttctctaggggt 9983149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 44632341 - 44632395
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    |||||||||||||| |||||| ||  |||||||||||||| |||||||| |||||    
T  44632341 aaatgttaaagtgatcatattgttcgataatacattacaatatttttctaggggt 44632395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 12494894 - 12494850
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    ||||||||||||||||||||| ||| ||||| |||||||| ||||    
T  12494894 aaatgttaaagtgaacatattgttggataatgcattacaatattt 12494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 17134830 - 17134790
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaac 167  Q
    ||||||||||||||||||||| |||||||||  ||||||||    
T  17134830 aaatgttaaagtgaacatattgttgaataatgtattacaac 17134790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 45866391 - 45866431
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaac 167  Q
    ||||||||||||||||||||| ||| ||||| |||||||||    
T  45866391 aaatgttaaagtgaacatattgttggataatgcattacaac 45866431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 12980264 - 12980210
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||| ||| |||||    
T  12980264 aaatgttaaagtgaacatattgttggataatgcattacaacatttctctaggggt 12980210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 16078901 - 16078847
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    ||||||||||||||||||||| ||| |||||  |||||||||||| ||| |||||    
T  16078901 aaatgttaaagtgaacatattgttggataatgaattacaacatttctctaggggt 16078847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 18826077 - 18826121
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    |||||||||||||| |||||||||| || || |||||||||||||    
T  18826077 aaatgttaaagtgagcatattattggatgatgcattacaacattt 18826121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 26874254 - 26874210
Alignment:
Q  126 gaaatgttaaagtgaacatattattgaataatacattacaacatt 170  Q
    |||||||||||| |||||||||| || ||||| ||||||||||||    
T  26874254 gaaatgttaaagcgaacatattactggataatgcattacaacatt 26874210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 7394092 - 7394136
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  7394092 aaatgttaaagtgaacatattgttggataatgcattacaacattt 7394136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 14411038 - 14411082
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    |||||||||||||| ||||||  || |||||||||||||||||||    
T  14411038 aaatgttaaagtgagcatattgctggataatacattacaacattt 14411082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 14505969 - 14505925
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||    
T  14505969 aaatgttaaagtgagcatattgttggataatgcattacaacattt 14505925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 35139373 - 35139326
Alignment:
Q  123 aatgaaatgttaaagtgaacatattattgaataatacattacaacatt 170  Q
    ||||||| |||||||| |||||||||||| ||||||| ||||||||||    
T  35139373 aatgaaaagttaaagtaaacatattattggataatacgttacaacatt 35139326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 1012500 - 1012446
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    ||||||||||||||||||||| ||| ||||| |||||||| |||| ||| |||||    
T  1012500 aaatgttaaagtgaacatattgttggataatccattacaatatttctctaggggt 1012446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 34139330 - 34139276
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    ||||||||||||||||||||| ||| ||||| ||||| ||||||| ||| |||||    
T  34139330 aaatgttaaagtgaacatattgttggataatgcattataacatttctctaggggt 34139276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 16226931 - 16226986
Alignment:
Q  126 gaaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    |||||||||||||||| ||||| ||| |||||||||||||| |||| ||| |||||    
T  16226931 gaaatgttaaagtgaatatattgttggataatacattacaatatttctctaggggt 16226986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 31942391 - 31942435
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    ||||||||||||||||||||| ||| ||||| |||||||| ||||    
T  31942391 aaatgttaaagtgaacatattgttggataatgcattacaatattt 31942435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 14350 - 14404
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    ||||||||||||||||||||| ||| ||||| |||||||| |||| ||| |||||    
T  14350 aaatgttaaagtgaacatattgttggataattcattacaatatttctctaggggt 14404  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 33862389 - 33862443
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    ||||||||||||||||||||| ||| ||||| |||||||| |||| ||| |||||    
T  33862389 aaatgttaaagtgaacatattgttggataatgcattacaatatttctcttggggt 33862443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 35194195 - 35194249
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacatttttctcggggt 181  Q
    |||||||||||||||||||||  || ||||| ||||||||||||| ||| |||||    
T  35194195 aaatgttaaagtgaacatattgctggataatgcattacaacatttctctaggggt 35194249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 1218639 - 1218599
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaac 167  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  1218639 aaatgttaaagtgagcatattgttgaataatatattacaac 1218599  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 30115366 - 30115322
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||    
T  30115366 aaatgttaaagtgagcatattgttggataatgcattacaacattt 30115322  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 6289 - 6245
Alignment:
Q  127 aaatgttaaagtgaacatattattgaataatacattacaacattt 171  Q
    |||||||||||||||||||||  || ||||| |||||||||||||    
T  6289 aaatgttaaagtgaacatattgctggataatgcattacaacattt 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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