View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3857_low_14 (Length: 485)

Name: NF3857_low_14
Description: NF3857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3857_low_14
NF3857_low_14
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-336)||(146572-146890)
[»] chr4 (80 HSPs)
chr4 (347-465)||(18931484-18931602)
chr4 (347-465)||(27763125-27763243)
chr4 (347-465)||(13230215-13230333)
chr4 (347-465)||(18405459-18405577)
chr4 (347-465)||(39730519-39730637)
chr4 (348-465)||(35999418-35999535)
chr4 (350-465)||(34238180-34238295)
chr4 (347-465)||(935857-935975)
chr4 (347-465)||(39835533-39835651)
chr4 (347-465)||(45595999-45596117)
chr4 (347-465)||(45748021-45748139)
chr4 (347-465)||(47670093-47670211)
chr4 (347-465)||(55968226-55968344)
chr4 (349-465)||(48519117-48519233)
chr4 (346-465)||(42773678-42773797)
chr4 (350-465)||(50673130-50673245)
chr4 (347-465)||(6280147-6280265)
chr4 (347-465)||(25932172-25932290)
chr4 (347-465)||(31938095-31938213)
chr4 (347-465)||(40435631-40435749)
chr4 (347-465)||(41859272-41859390)
chr4 (347-465)||(43722995-43723113)
chr4 (347-465)||(48873752-48873870)
chr4 (347-465)||(48879056-48879174)
chr4 (347-458)||(27555158-27555269)
chr4 (347-465)||(23686518-23686636)
chr4 (347-465)||(41744447-41744565)
chr4 (348-468)||(32953255-32953375)
chr4 (347-464)||(8321976-8322093)
chr4 (380-465)||(39498589-39498674)
chr4 (380-465)||(39501928-39502013)
chr4 (384-468)||(34049820-34049904)
chr4 (347-465)||(27942468-27942586)
chr4 (347-468)||(7258695-7258816)
chr4 (347-465)||(52469428-52469548)
chr4 (18-140)||(46283118-46283240)
chr4 (18-142)||(16556445-16556569)
chr4 (18-114)||(50815729-50815825)
chr4 (358-465)||(36858150-36858256)
chr4 (347-468)||(30790279-30790399)
chr4 (347-420)||(36860027-36860100)
chr4 (32-141)||(36993036-36993145)
chr4 (32-140)||(40406951-40407060)
chr4 (50-116)||(27862840-27862906)
chr4 (350-463)||(37014611-37014724)
chr4 (346-455)||(38413906-38414015)
chr4 (18-127)||(45355695-45355803)
chr4 (18-127)||(45369436-45369544)
chr4 (36-135)||(22096386-22096485)
chr4 (17-116)||(25234834-25234933)
chr4 (18-116)||(11491196-11491294)
chr4 (18-131)||(51707125-51707237)
chr4 (347-407)||(18405134-18405194)
chr4 (347-463)||(51968510-51968626)
chr4 (18-113)||(22341839-22341934)
chr4 (347-401)||(25916302-25916357)
chr4 (52-135)||(52366208-52366291)
chr4 (50-116)||(23448993-23449059)
chr4 (32-109)||(2832062-2832139)
chr4 (347-424)||(32713385-32713462)
chr4 (18-110)||(55433212-55433305)
chr4 (75-127)||(13210198-13210250)
chr4 (27-139)||(23233935-23234047)
chr4 (19-131)||(43084452-43084564)
chr4 (32-116)||(45847917-45848001)
chr4 (37-112)||(17329119-17329194)
chr4 (38-141)||(43362165-43362268)
chr4 (29-131)||(42154571-42154673)
chr4 (18-140)||(51974743-51974865)
chr4 (30-110)||(53096512-53096593)
chr4 (28-116)||(38690686-38690774)
chr4 (347-465)||(10401007-10401124)
chr4 (51-97)||(24234084-24234130)
chr4 (47-97)||(37997852-37997902)
chr4 (411-465)||(47426460-47426514)
chr4 (18-115)||(26885377-26885474)
chr4 (35-140)||(49635428-49635533)
chr4 (91-127)||(8716563-8716599)
chr4 (23-119)||(32037584-32037680)
chr4 (52-127)||(35909039-35909115)
[»] chr1 (102 HSPs)
chr1 (347-468)||(12190400-12190521)
chr1 (347-465)||(9832096-9832214)
chr1 (347-465)||(5806502-5806620)
chr1 (347-465)||(8331742-8331860)
chr1 (347-465)||(39930185-39930303)
chr1 (347-465)||(46666436-46666554)
chr1 (347-468)||(25473983-25474104)
chr1 (347-465)||(6911213-6911331)
chr1 (347-465)||(9115565-9115683)
chr1 (347-465)||(25789491-25789609)
chr1 (347-465)||(32824649-32824767)
chr1 (347-465)||(36361511-36361629)
chr1 (347-465)||(47031587-47031705)
chr1 (347-465)||(51445305-51445423)
chr1 (347-465)||(14788451-14788569)
chr1 (347-465)||(20260312-20260430)
chr1 (347-465)||(38964905-38965023)
chr1 (347-465)||(52630501-52630619)
chr1 (351-464)||(4683600-4683713)
chr1 (347-465)||(32202539-32202657)
chr1 (347-464)||(1597569-1597686)
chr1 (347-464)||(37436846-37436963)
chr1 (347-458)||(2430225-2430336)
chr1 (347-465)||(48916247-48916366)
chr1 (347-465)||(50190990-50191108)
chr1 (348-465)||(5518729-5518846)
chr1 (349-465)||(13653581-13653698)
chr1 (347-463)||(29091400-29091516)
chr1 (347-468)||(1228100-1228223)
chr1 (358-465)||(35187195-35187302)
chr1 (33-140)||(50011503-50011610)
chr1 (18-140)||(34702290-34702412)
chr1 (350-463)||(2632584-2632697)
chr1 (32-140)||(24134615-24134723)
chr1 (347-463)||(31806975-31807091)
chr1 (358-465)||(52699691-52699798)
chr1 (347-467)||(46960356-46960477)
chr1 (32-142)||(47651866-47651975)
chr1 (18-131)||(30735833-30735946)
chr1 (347-464)||(47677372-47677489)
chr1 (347-465)||(17475534-17475653)
chr1 (18-141)||(47428872-47428995)
chr1 (18-116)||(42946444-42946542)
chr1 (18-140)||(49619968-49620090)
chr1 (18-143)||(7438614-7438739)
chr1 (18-143)||(14262698-14262823)
chr1 (20-140)||(25421850-25421971)
chr1 (384-465)||(49823122-49823203)
chr1 (347-407)||(24116618-24116678)
chr1 (17-116)||(52720704-52720803)
chr1 (34-140)||(15417810-15417916)
chr1 (18-140)||(40061439-40061561)
chr1 (18-127)||(2017662-2017770)
chr1 (18-127)||(43109215-43109324)
chr1 (350-463)||(48462263-48462375)
chr1 (347-463)||(49627302-49627419)
chr1 (20-132)||(50302830-50302942)
chr1 (347-463)||(3939229-3939345)
chr1 (347-467)||(37261547-37261667)
chr1 (20-116)||(50065030-50065126)
chr1 (347-465)||(9011385-9011506)
chr1 (18-141)||(48497190-48497313)
chr1 (18-140)||(4126895-4127017)
chr1 (347-450)||(13932111-13932216)
chr1 (66-140)||(22386261-22386335)
chr1 (37-126)||(8893870-8893959)
chr1 (18-131)||(10123030-10123142)
chr1 (347-460)||(19923694-19923807)
chr1 (347-400)||(39329350-39329403)
chr1 (358-467)||(45813618-45813727)
chr1 (415-465)||(3572791-3572841)
chr1 (411-465)||(6978562-6978616)
chr1 (18-140)||(12973255-12973377)
chr1 (18-116)||(19424066-19424164)
chr1 (32-126)||(25031488-25031582)
chr1 (350-420)||(52186268-52186338)
chr1 (18-140)||(27054686-27054814)
chr1 (32-113)||(29936672-29936753)
chr1 (347-464)||(38519287-38519404)
chr1 (347-392)||(49824022-49824067)
chr1 (47-94)||(3797897-3797944)
chr1 (36-143)||(12148568-12148675)
chr1 (18-97)||(29332323-29332402)
chr1 (382-464)||(13048496-13048578)
chr1 (382-464)||(13053493-13053575)
chr1 (17-87)||(22779272-22779342)
chr1 (18-116)||(30325020-30325117)
chr1 (347-462)||(45771820-45771937)
chr1 (91-141)||(52164421-52164471)
chr1 (388-465)||(30240782-30240857)
chr1 (417-465)||(39329406-39329454)
chr1 (348-407)||(13521053-13521112)
chr1 (88-135)||(27160496-27160543)
chr1 (51-97)||(9527465-9527511)
chr1 (38-116)||(25800330-25800408)
chr1 (260-306)||(48522240-48522286)
chr1 (34-131)||(3347696-3347793)
chr1 (34-116)||(33931212-33931296)
chr1 (347-396)||(37726810-37726859)
chr1 (347-400)||(47845422-47845475)
chr1 (47-87)||(2643821-2643861)
chr1 (18-86)||(31964593-31964661)
[»] chr7 (77 HSPs)
chr7 (347-465)||(44565772-44565890)
chr7 (347-465)||(45265274-45265392)
chr7 (347-465)||(27214081-27214199)
chr7 (347-465)||(28904412-28904530)
chr7 (347-465)||(33378561-33378679)
chr7 (347-465)||(34930693-34930811)
chr7 (347-465)||(35488415-35488533)
chr7 (347-465)||(45448669-45448787)
chr7 (347-468)||(48313849-48313970)
chr7 (350-465)||(43948975-43949090)
chr7 (347-465)||(11329720-11329838)
chr7 (347-465)||(25924863-25924981)
chr7 (347-465)||(27248020-27248138)
chr7 (347-465)||(30686217-30686335)
chr7 (347-465)||(38396592-38396709)
chr7 (347-465)||(48160799-48160917)
chr7 (347-465)||(45045353-45045471)
chr7 (347-465)||(48341091-48341208)
chr7 (348-464)||(18823890-18824006)
chr7 (348-465)||(39553910-39554028)
chr7 (347-464)||(37534329-37534446)
chr7 (347-464)||(9947217-9947335)
chr7 (348-465)||(25097796-25097914)
chr7 (347-465)||(27419450-27419568)
chr7 (347-465)||(41632590-41632703)
chr7 (18-127)||(12166091-12166200)
chr7 (370-465)||(9814440-9814535)
chr7 (358-465)||(38543932-38544039)
chr7 (346-465)||(44819980-44820099)
chr7 (381-465)||(8419815-8419899)
chr7 (32-116)||(34322015-34322099)
chr7 (32-140)||(40273817-40273925)
chr7 (347-462)||(31598450-31598565)
chr7 (18-116)||(4956069-4956167)
chr7 (18-140)||(24029981-24030102)
chr7 (18-116)||(38378239-38378337)
chr7 (18-140)||(48433687-48433809)
chr7 (348-464)||(43446109-43446224)
chr7 (33-140)||(3961400-3961507)
chr7 (347-463)||(31921952-31922070)
chr7 (18-140)||(26455982-26456104)
chr7 (388-465)||(40212657-40212734)
chr7 (347-468)||(17276381-17276503)
chr7 (18-143)||(27454004-27454130)
chr7 (19-141)||(48619792-48619913)
chr7 (32-116)||(31793488-31793572)
chr7 (349-464)||(22156406-22156520)
chr7 (349-464)||(22212321-22212435)
chr7 (358-465)||(40385853-40385960)
chr7 (18-140)||(46266664-46266786)
chr7 (18-103)||(42841758-42841843)
chr7 (23-116)||(43440709-43440802)
chr7 (32-140)||(23824583-23824690)
chr7 (23-127)||(42554643-42554747)
chr7 (66-140)||(1575690-1575764)
chr7 (347-465)||(5543357-5543474)
chr7 (18-140)||(14707289-14707410)
chr7 (358-420)||(45722897-45722959)
chr7 (347-463)||(6656698-6656815)
chr7 (20-140)||(36528198-36528318)
chr7 (18-97)||(5228109-5228188)
chr7 (347-394)||(16916182-16916229)
chr7 (35-116)||(3889794-3889876)
chr7 (32-97)||(10091448-10091513)
chr7 (29-94)||(26606097-26606162)
chr7 (17-140)||(15025152-15025275)
chr7 (18-116)||(28914854-28914953)
chr7 (38-97)||(31475837-31475896)
chr7 (359-469)||(45440650-45440757)
chr7 (38-140)||(33248799-33248901)
chr7 (49-127)||(44986603-44986681)
chr7 (91-140)||(3902323-3902372)
chr7 (347-404)||(20601056-20601113)
chr7 (63-140)||(42338269-42338346)
chr7 (409-465)||(11000486-11000541)
chr7 (75-127)||(24315387-24315439)
chr7 (410-463)||(43569912-43569967)
[»] chr3 (82 HSPs)
chr3 (347-465)||(6231727-6231845)
chr3 (347-465)||(46359679-46359797)
chr3 (347-465)||(8476534-8476652)
chr3 (347-465)||(47115083-47115201)
chr3 (347-465)||(11239346-11239464)
chr3 (347-465)||(26848749-26848867)
chr3 (347-465)||(33218139-33218257)
chr3 (347-465)||(44952035-44952153)
chr3 (347-465)||(20414691-20414809)
chr3 (347-465)||(31611211-31611329)
chr3 (347-465)||(48339983-48340101)
chr3 (347-463)||(1098926-1099042)
chr3 (347-465)||(9320674-9320793)
chr3 (347-458)||(40907993-40908104)
chr3 (347-465)||(20297520-20297638)
chr3 (347-465)||(24574294-24574412)
chr3 (347-468)||(24783936-24784058)
chr3 (347-464)||(43719152-43719269)
chr3 (347-465)||(43132382-43132500)
chr3 (347-465)||(53165950-53166068)
chr3 (347-468)||(40584338-40584459)
chr3 (347-464)||(10822944-10823061)
chr3 (347-464)||(26849372-26849489)
chr3 (348-465)||(28124662-28124779)
chr3 (347-464)||(29512327-29512444)
chr3 (347-467)||(6832146-6832266)
chr3 (18-140)||(33528182-33528304)
chr3 (347-431)||(6927818-6927902)
chr3 (18-127)||(47864645-47864754)
chr3 (347-467)||(49216027-49216147)
chr3 (18-141)||(39739269-39739392)
chr3 (18-131)||(985896-986009)
chr3 (347-464)||(12228481-12228598)
chr3 (347-463)||(31436150-31436266)
chr3 (52-140)||(46798578-46798666)
chr3 (18-128)||(27471512-27471622)
chr3 (38-131)||(31419588-31419681)
chr3 (349-430)||(32070999-32071080)
chr3 (32-140)||(50381710-50381818)
chr3 (18-140)||(11483609-11483731)
chr3 (18-116)||(31435478-31435576)
chr3 (18-135)||(9320936-9321053)
chr3 (18-103)||(29645804-29645889)
chr3 (63-140)||(46247256-46247333)
chr3 (349-465)||(38140594-38140710)
chr3 (49-116)||(16141361-16141428)
chr3 (349-464)||(18460582-18460697)
chr3 (18-97)||(27394546-27394625)
chr3 (18-113)||(44062019-44062113)
chr3 (18-116)||(166808-166906)
chr3 (18-128)||(33830345-33830455)
chr3 (347-468)||(12931163-12931284)
chr3 (18-127)||(27817045-27817153)
chr3 (347-463)||(28770437-28770553)
chr3 (35-140)||(29226322-29226427)
chr3 (18-127)||(38668137-38668246)
chr3 (17-134)||(48717415-48717532)
chr3 (360-468)||(27093769-27093876)
chr3 (348-464)||(33650241-33650357)
chr3 (18-116)||(32421368-32421466)
chr3 (52-140)||(25165436-25165525)
chr3 (18-134)||(22602180-22602296)
chr3 (28-116)||(37756400-37756488)
chr3 (414-465)||(19532939-19532990)
chr3 (18-116)||(1102673-1102771)
chr3 (67-140)||(2259153-2259226)
chr3 (75-140)||(30162653-30162718)
chr3 (44-97)||(34407093-34407146)
chr3 (18-140)||(55426110-55426228)
chr3 (347-463)||(31267575-31267691)
chr3 (88-127)||(34225204-34225243)
chr3 (18-113)||(54457176-54457271)
chr3 (18-72)||(8930954-8931008)
chr3 (46-84)||(25750347-25750385)
chr3 (47-97)||(31108766-31108816)
chr3 (18-116)||(38414903-38415001)
chr3 (18-140)||(49429457-49429578)
chr3 (75-140)||(36590386-36590451)
chr3 (18-135)||(50676844-50676961)
chr3 (347-375)||(13642826-13642854)
chr3 (347-431)||(27822998-27823082)
chr3 (17-61)||(50332934-50332978)
[»] chr2 (72 HSPs)
chr2 (347-465)||(5770336-5770454)
chr2 (347-465)||(638321-638439)
chr2 (347-465)||(14777724-14777842)
chr2 (347-465)||(346571-346689)
chr2 (347-465)||(4559286-4559404)
chr2 (347-465)||(6171518-6171636)
chr2 (347-465)||(42674887-42675005)
chr2 (344-465)||(9734072-9734193)
chr2 (347-465)||(2050593-2050711)
chr2 (347-465)||(17965710-17965828)
chr2 (347-465)||(23943890-23944008)
chr2 (347-465)||(37233157-37233275)
chr2 (347-465)||(41729356-41729474)
chr2 (347-465)||(11071332-11071450)
chr2 (347-465)||(21737634-21737752)
chr2 (347-465)||(28311922-28312040)
chr2 (347-465)||(37192249-37192367)
chr2 (348-465)||(40951085-40951202)
chr2 (347-465)||(13760694-13760812)
chr2 (347-465)||(20426708-20426826)
chr2 (347-464)||(26309994-26310111)
chr2 (381-465)||(2521436-2521520)
chr2 (367-465)||(41750276-41750374)
chr2 (347-468)||(39819417-39819538)
chr2 (365-465)||(34356925-34357024)
chr2 (347-458)||(37533680-37533791)
chr2 (347-465)||(3254318-3254436)
chr2 (347-465)||(7007312-7007430)
chr2 (347-464)||(3902184-3902301)
chr2 (348-468)||(13790018-13790139)
chr2 (347-468)||(40569745-40569866)
chr2 (350-463)||(45408981-45409094)
chr2 (350-465)||(27358188-27358303)
chr2 (347-465)||(14832538-14832656)
chr2 (395-465)||(39995365-39995435)
chr2 (347-465)||(45693916-45694034)
chr2 (358-465)||(11763626-11763733)
chr2 (347-465)||(18713882-18714000)
chr2 (18-131)||(3330178-3330291)
chr2 (349-464)||(14403431-14403548)
chr2 (33-131)||(19843355-19843453)
chr2 (350-468)||(41298140-41298255)
chr2 (20-127)||(11069328-11069431)
chr2 (18-140)||(25553123-25553244)
chr2 (18-116)||(43027175-43027273)
chr2 (350-403)||(2521381-2521434)
chr2 (18-127)||(34107504-34107612)
chr2 (347-463)||(5003063-5003179)
chr2 (17-116)||(5901807-5901906)
chr2 (18-97)||(42541194-42541273)
chr2 (18-116)||(17543067-17543165)
chr2 (32-110)||(18424143-18424221)
chr2 (18-116)||(41749967-41750064)
chr2 (380-465)||(1988072-1988157)
chr2 (350-462)||(4875506-4875619)
chr2 (35-127)||(31149096-31149187)
chr2 (35-127)||(33482636-33482728)
chr2 (18-141)||(18949662-18949784)
chr2 (18-141)||(42678301-42678424)
chr2 (347-457)||(1623079-1623188)
chr2 (17-127)||(27463503-27463612)
chr2 (18-131)||(6866513-6866626)
chr2 (348-403)||(14253254-14253309)
chr2 (18-80)||(5207148-5207210)
chr2 (409-463)||(14253343-14253397)
chr2 (89-127)||(16403534-16403572)
chr2 (63-117)||(31223642-31223696)
chr2 (18-116)||(33065234-33065332)
chr2 (349-422)||(36590841-36590915)
chr2 (18-80)||(37592199-37592261)
chr2 (18-116)||(40203256-40203354)
chr2 (347-407)||(25444927-25444987)
[»] chr8 (76 HSPs)
chr8 (347-465)||(38363808-38363926)
chr8 (347-465)||(37392772-37392890)
chr8 (344-464)||(10896443-10896563)
chr8 (347-463)||(18297839-18297955)
chr8 (347-465)||(26061871-26061989)
chr8 (347-465)||(32661160-32661278)
chr8 (347-465)||(35818650-35818768)
chr8 (347-465)||(42755594-42755712)
chr8 (347-465)||(3049736-3049854)
chr8 (347-465)||(16313733-16313851)
chr8 (347-465)||(25837638-25837756)
chr8 (347-465)||(38132964-38133082)
chr8 (348-465)||(40197279-40197396)
chr8 (347-465)||(7930966-7931084)
chr8 (347-465)||(12710372-12710490)
chr8 (347-465)||(18726846-18726964)
chr8 (347-464)||(5020718-5020835)
chr8 (347-465)||(26602163-26602281)
chr8 (347-465)||(21137357-21137474)
chr8 (32-140)||(1032566-1032674)
chr8 (358-465)||(1554580-1554688)
chr8 (347-449)||(25899386-25899488)
chr8 (347-465)||(33444848-33444966)
chr8 (347-464)||(16219168-16219285)
chr8 (347-464)||(41432466-41432585)
chr8 (32-140)||(41454818-41454926)
chr8 (18-140)||(38063973-38064095)
chr8 (18-131)||(4259864-4259977)
chr8 (18-127)||(38289212-38289321)
chr8 (347-464)||(34672088-34672207)
chr8 (385-465)||(35394156-35394236)
chr8 (347-464)||(19160967-19161085)
chr8 (18-116)||(43413863-43413961)
chr8 (18-135)||(39104608-39104724)
chr8 (347-460)||(43872196-43872309)
chr8 (52-140)||(30466675-30466763)
chr8 (349-468)||(15226695-15226814)
chr8 (52-131)||(36103933-36104012)
chr8 (378-465)||(6805848-6805939)
chr8 (18-116)||(45536738-45536836)
chr8 (33-134)||(5904366-5904467)
chr8 (18-114)||(1360112-1360207)
chr8 (52-140)||(44828444-44828532)
chr8 (32-131)||(11052575-11052674)
chr8 (411-465)||(7317168-7317222)
chr8 (34-140)||(12831566-12831672)
chr8 (18-116)||(22652703-22652801)
chr8 (347-465)||(29421714-29421835)
chr8 (347-465)||(31117749-31117870)
chr8 (414-465)||(41228939-41228990)
chr8 (32-142)||(3311434-3311544)
chr8 (18-116)||(34037925-34038023)
chr8 (75-140)||(13906660-13906725)
chr8 (347-420)||(33533663-33533736)
chr8 (347-464)||(37124076-37124194)
chr8 (347-438)||(37982040-37982131)
chr8 (20-127)||(279976-280082)
chr8 (20-127)||(635770-635876)
chr8 (20-127)||(821573-821679)
chr8 (18-131)||(8350441-8350555)
chr8 (347-401)||(35394085-35394139)
chr8 (38-116)||(43508445-43508523)
chr8 (75-116)||(10161984-10162025)
chr8 (55-116)||(23139094-23139155)
chr8 (19-112)||(27102310-27102403)
chr8 (17-113)||(10201285-10201381)
chr8 (35-115)||(33820389-33820469)
chr8 (32-127)||(41845420-41845515)
chr8 (51-97)||(5184897-5184943)
chr8 (91-141)||(12927801-12927851)
chr8 (18-115)||(31153505-31153603)
chr8 (18-140)||(36587627-36587749)
chr8 (50-136)||(43456661-43456747)
chr8 (28-97)||(17855688-17855757)
chr8 (90-130)||(16973028-16973068)
chr8 (28-116)||(19957308-19957396)
[»] chr6 (38 HSPs)
chr6 (347-465)||(2657427-2657545)
chr6 (347-465)||(18897648-18897766)
chr6 (347-465)||(10246342-10246460)
chr6 (347-465)||(8029030-8029148)
chr6 (347-465)||(14170742-14170860)
chr6 (354-462)||(7344723-7344831)
chr6 (347-465)||(1316746-1316864)
chr6 (347-465)||(7053804-7053922)
chr6 (347-464)||(16968652-16968769)
chr6 (348-465)||(6705978-6706095)
chr6 (18-126)||(29321953-29322061)
chr6 (18-140)||(6228237-6228359)
chr6 (348-462)||(21008208-21008322)
chr6 (32-140)||(20415553-20415661)
chr6 (18-116)||(18903344-18903442)
chr6 (23-127)||(24794877-24794981)
chr6 (349-461)||(8314623-8314735)
chr6 (18-131)||(1128393-1128509)
chr6 (350-404)||(11570071-11570125)
chr6 (361-465)||(14781836-14781940)
chr6 (18-141)||(19221695-19221818)
chr6 (18-116)||(4854283-4854381)
chr6 (18-140)||(17216954-17217076)
chr6 (33-94)||(11611411-11611472)
chr6 (75-140)||(15717047-15717112)
chr6 (50-127)||(19748108-19748185)
chr6 (32-116)||(7954913-7954997)
chr6 (347-464)||(9762266-9762384)
chr6 (18-116)||(11552891-11552989)
chr6 (32-141)||(31637339-31637448)
chr6 (34-112)||(32470708-32470787)
chr6 (18-72)||(5641667-5641721)
chr6 (89-131)||(21874269-21874311)
chr6 (32-114)||(25091090-25091172)
chr6 (67-116)||(9357176-9357225)
chr6 (82-127)||(25045749-25045794)
chr6 (18-70)||(7164760-7164812)
chr6 (90-142)||(30422157-30422209)
[»] chr5 (54 HSPs)
chr5 (347-468)||(8406621-8406742)
chr5 (347-465)||(555932-556050)
chr5 (347-465)||(4765786-4765904)
chr5 (347-465)||(22936138-22936256)
chr5 (347-465)||(6091442-6091560)
chr5 (347-465)||(11855881-11855999)
chr5 (347-465)||(18411936-18412054)
chr5 (347-465)||(27481084-27481202)
chr5 (347-465)||(28602283-28602401)
chr5 (347-465)||(29543241-29543359)
chr5 (347-464)||(12970757-12970874)
chr5 (347-465)||(19065731-19065849)
chr5 (347-464)||(32535664-32535781)
chr5 (347-458)||(8646623-8646734)
chr5 (347-465)||(6930369-6930487)
chr5 (347-465)||(14207047-14207165)
chr5 (347-465)||(26637247-26637365)
chr5 (347-465)||(36703509-36703627)
chr5 (18-140)||(38503234-38503356)
chr5 (347-464)||(1664458-1664575)
chr5 (18-131)||(15470598-15470711)
chr5 (32-140)||(31250143-31250251)
chr5 (27-127)||(43227875-43227975)
chr5 (18-116)||(930915-931013)
chr5 (18-131)||(15106864-15106977)
chr5 (347-416)||(20962287-20962356)
chr5 (17-116)||(1572130-1572229)
chr5 (17-116)||(26671603-26671702)
chr5 (17-116)||(26943200-26943299)
chr5 (347-464)||(28429455-28429573)
chr5 (18-127)||(17077370-17077479)
chr5 (347-463)||(27480738-27480854)
chr5 (381-468)||(35602999-35603084)
chr5 (347-465)||(17251541-17251659)
chr5 (354-425)||(35348791-35348862)
chr5 (348-464)||(16720910-16721029)
chr5 (18-140)||(5039677-5039798)
chr5 (411-465)||(36703665-36703719)
chr5 (18-127)||(5263178-5263287)
chr5 (18-115)||(33545364-33545460)
chr5 (347-419)||(31583331-31583403)
chr5 (347-464)||(36978358-36978477)
chr5 (34-141)||(42208912-42209018)
chr5 (347-450)||(43347135-43347238)
chr5 (18-116)||(34729492-34729589)
chr5 (32-113)||(4395842-4395923)
chr5 (75-140)||(12375446-12375511)
chr5 (381-446)||(27079206-27079270)
chr5 (55-129)||(87798-87872)
chr5 (358-420)||(27901697-27901759)
chr5 (44-97)||(18101952-18102005)
chr5 (402-463)||(20962373-20962434)
chr5 (90-127)||(42643852-42643889)
chr5 (71-127)||(462015-462071)
[»] scaffold0006 (3 HSPs)
scaffold0006 (347-458)||(201653-201764)
scaffold0006 (349-465)||(143342-143459)
scaffold0006 (348-407)||(119051-119110)
[»] scaffold0189 (1 HSPs)
scaffold0189 (347-465)||(29178-29296)
[»] scaffold0702 (1 HSPs)
scaffold0702 (347-468)||(3787-3909)
[»] scaffold0662 (1 HSPs)
scaffold0662 (347-468)||(4193-4315)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-140)||(419708-419830)
[»] scaffold0238 (1 HSPs)
scaffold0238 (348-423)||(23601-23675)
[»] scaffold0018 (1 HSPs)
scaffold0018 (75-140)||(121833-121898)
[»] scaffold0112 (1 HSPs)
scaffold0112 (41-97)||(17931-17987)


Alignment Details
Target: scaffold0007 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 18 - 336
Target Start/End: Complemental strand, 146890 - 146572
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  |||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||| |||  |||||||||||||||||||| |||||     
T  146890 tcaagtagcgtagcggctagagaaattcacctttaagatgaacaggtggg-tgtctagggttcaaactccaatccctgcacatattgtgcattgtccctc 146792  T
Q  118 actaaatgagttaaactcgtggga-catctactcatgtgttttaatatttattacataactaaatctactcatgtgttttaattatgttataaatatgga 216  Q
    |||||||||||||| ||||||||| ||| ||||||| ||||||||||||||| | |||| | ||| ||||| ||||||||||||||||||||||||||||    
T  146791 actaaatgagttaagctcgtgggaacatatactcatatgttttaatatttataagataattgaatatactcctgtgttttaattatgttataaatatgga 146692  T
Q  217 tgtgaatcgaatacaannnnnnnatagaaagaatcttagttcattcatttattataatagtatagatataagatgaaattttaatatgaaaaacaaaaac 316  Q
    ||||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||    
T  146691 tgtgaatcgaatacaatttttgtatagaaagaatcttagttcattcatttataataatagtatagatataagatgaaattttaacataaaaaacaaaaac 146592  T
Q  317 tagcatgacatgatatcgca 336  Q
    ||||||||||||| ||||||    
T  146591 tagcatgacatgaaatcgca 146572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 5e-51; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 18931484 - 18931602
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18931484 gtgtttgttttaagtttatcaaatttattcttaggaataacattccttggaatataaagatagaaattttattccaaggaatttaagaaaaatatgtttg 18931583  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  18931584 gttagctttataatattcc 18931602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 27763243 - 27763125
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  27763243 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagataggaattttattccaaggaatttaggaaaaatatgtttg 27763144  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  27763143 gttagctttataatattcc 27763125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 13230333 - 13230215
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  13230333 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 13230234  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  13230233 gttagctttataatattcc 13230215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 18405577 - 18405459
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  18405577 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatggaaattttattctcaggaatttaggaaaaatatgtttg 18405478  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  18405477 gttagctttataatattcc 18405459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 39730637 - 39730519
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  39730637 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 39730538  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  39730537 gttaactttataatattcc 39730519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 348 - 465
Target Start/End: Original strand, 35999418 - 35999535
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||||||    
T  35999418 tgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttgg 35999517  T
Q  448 ttacctttataatattcc 465  Q
    ||| ||||||||||||||    
T  35999518 ttagctttataatattcc 35999535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 350 - 465
Target Start/End: Complemental strand, 34238295 - 34238180
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacattccttggaatataaagatgagaattttattccaaggaatttaagaaaaatatgtttggtt 34238196  T
Q  450 acctttataatattcc 465  Q
    | ||||||||||||||    
T  34238195 agctttataatattcc 34238180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 935857 - 935975
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| || ||||||| ||||||||||||||    
T  935857 gtgtttgtttcaagtttaccaaatttattcttaagaataacatttcttggaatataaagataggaattttattccaaagaatttaggaaaaatatgtttg 935956  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  935957 gttagctttataatattcc 935975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 39835651 - 39835533
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  39835651 gtgtttgtttcaagtttaccaaatttatttctatgaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 39835552  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  39835551 gttaactttataatattcc 39835533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 45595999 - 45596117
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  45595999 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 45596098  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  45596099 gttagctttataatattcc 45596117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 45748139 - 45748021
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||||||||  |||||||||||||    
T  45748139 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgtttg 45748040  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  45748039 gttagctttataatattcc 45748021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 47670093 - 47670211
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||| ||||    
T  47670093 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatatttg 47670192  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  47670193 gttatctttataatattcc 47670211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 55968344 - 55968226
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||||||||  |||||||||||||    
T  55968344 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgtttg 55968245  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  55968244 gttaactttataatattcc 55968226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 349 - 465
Target Start/End: Complemental strand, 48519233 - 48519117
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggt 448  Q
    |||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||||    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgtgaattttattccaaggaatttaggaaaaatatgtttggt 48519134  T
Q  449 tacctttataatattcc 465  Q
    || ||||||||||||||    
T  48519133 tagctttataatattcc 48519117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 346 - 465
Target Start/End: Original strand, 42773678 - 42773797
Alignment:
Q  346 cgtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgttt 445  Q
    ||||||||||| ||||||| ||||||||||||||  |||||||||||||||| ||||||||| | |||||||||| |||||||||| |||||||||||||    
T  42773678 cgtgtttgtttcaagtttaccaaatttattcctagaaataacattccttggagtataaagatgggaattttattccaaggaatttaggaaaaatatgttt 42773777  T
Q  446 ggttacctttataatattcc 465  Q
    ||||| ||||||||||||||    
T  42773778 ggttagctttataatattcc 42773797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 350 - 465
Target Start/End: Complemental strand, 50673245 - 50673130
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||   |||||||||| |||||||||| |||||||||||||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttggtt 50673146  T
Q  450 acctttataatattcc 465  Q
    | ||||||||||||||    
T  50673145 agctttataatattcc 50673130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 6280265 - 6280147
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||| ||||    
T  6280265 gtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaaaataggaattttattccaaggaatttatgaaaaatatatttg 6280166  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  6280165 gttaactttataatattcc 6280147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 25932172 - 25932290
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||  |||||||||||||| ||||||||||||||| ||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  25932172 gtgtttgtttcaagtttcccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 25932271  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  25932272 gttaactttataatattcc 25932290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 31938213 - 31938095
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||  ||||||||||| |||| ||||| ||||||||||||||    
T  31938213 gtgtttgtttcaagtttatcaaatttattcataggaataacattccttggaatttaaagatgaaaattttattccaaggtatttaggaaaaatatgtttg 31938114  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  31938113 gttaactttataatattcc 31938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 40435631 - 40435749
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||  || ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  40435631 gtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 40435730  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  40435731 gttaactttataatattcc 40435749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 41859390 - 41859272
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||  |||||||||| ||||||||||||||    
T  41859390 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatttcaaggaatttaggaaaaatatgtttg 41859291  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  41859290 gttagctttataatattcc 41859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 43722995 - 43723113
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| || ||||||| ||||||||||||||    
T  43722995 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaagaatttaggaaaaatatgtttg 43723094  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  43723095 gttagctttataatattcc 43723113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 48873752 - 48873870
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||| || ||||||||||||||    
T  48873752 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgtaggaaaaatatgtttg 48873851  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  48873852 gttagctttataatattcc 48873870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 48879056 - 48879174
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||| || ||||||||||||||    
T  48879056 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgtaggaaaaatatgtttg 48879155  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  48879156 gttagctttataatattcc 48879174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 347 - 458
Target Start/End: Original strand, 27555158 - 27555269
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  27555158 gtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 27555257  T
Q  447 gttacctttata 458  Q
    |||| |||||||    
T  27555258 gttagctttata 27555269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 23686518 - 23686636
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||| ||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  23686518 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 23686617  T
Q  447 gttacctttataatattcc 465  Q
    ||||  |||||||||||||    
T  23686618 gttagttttataatattcc 23686636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 41744565 - 41744447
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||| |||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  41744565 gtgtttgtttcaagtttaccaaatttatttctaggaataacattcattggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 41744466  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  41744465 gttagctttataatattcc 41744447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 348 - 468
Target Start/End: Original strand, 32953255 - 32953375
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| ||||||||| |||||||| |||  ||||| |||| ||||||||||||||| | |||||||||| |||||||||| |||||||||||||||    
T  32953255 tgtttgtttcaagtttatctaatttatttctagaaataatattcattggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttgg 32953354  T
Q  448 ttacctttataatattccaag 468  Q
    ||| |||||||||||| ||||    
T  32953355 ttagctttataatatttcaag 32953375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 8321976 - 8322093
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||  || ||||||||||| |||||||||||||||   |||||||||  |||||||||| ||||||||||||||    
T  8321976 gtgtttgtttcaagtttaccaaatttatttttaggaataacattctttggaatataaagatgagaattttattacaaggaatttaggaaaaatatgtttg 8322075  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  8322076 gttagctttataatattc 8322093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 39498589 - 39498674
Alignment:
Q  380 agaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  39498589 agaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatatatttggttagctttataatattcc 39498674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 39501928 - 39502013
Alignment:
Q  380 agaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  39501928 agaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatatatttggttagctttataatattcc 39502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 384 - 468
Target Start/End: Complemental strand, 34049904 - 34049820
Alignment:
Q  384 taacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattccaag 468  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||    
T  34049904 taacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgtttggttagctttataatattccaag 34049820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 27942468 - 27942586
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||  | |||||||||| ||   |||||||||  ||||||||||  |||||||||||||    
T  27942468 gtgtttgtttcaagtttaccaaatttattcctaggaataacatttttaggaatataaatatgagaattttatttcaaggaatttagaaaaaatatgtttg 27942567  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  27942568 gttagctttataatattcc 27942586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 7258695 - 7258816
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||  | |||||||||||||||||||||||| || | |||||||||| |||| |||| |  |||| |||||||    
T  7258695 gtgtttgtttcaagtttatcaaatttattctcaggaataacattccttggaatataaatatgggaattttattccaaggtatttgaataaaagatgtttg 7258794  T
Q  447 gttacctttataatattccaag 468  Q
    |||| | || ||||||||||||    
T  7258795 gttaacattttaatattccaag 7258816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 52469428 - 52469548
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattcc-ttggaatataaagatagaaattttattctaaggaattta-agaaaaatatgtt 444  Q
    |||||||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||| |||||||||| | ||   ||||| | ||||| |||||    
T  52469428 gtgtttgttttaagttaatcaaatttattcttaggaataacattcctttggaatataaagattgaaattttataccaaaatatttagaaaaaaacatgtt 52469527  T
Q  445 tggttacctttataatattcc 465  Q
    |||||| ||||||||||||||    
T  52469528 tggttagctttataatattcc 52469548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 46283240 - 46283118
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| | |||||||||||||  || |||||||||| ||||||||||  |||||| |||||| ||| ||||||||||||||||||||||||     
T  46283240 tcaagtagtctagtgactagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccgctgcacatattgtgcattatccctt 46283141  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  46283140 accaaatgaggtaagctcatggg 46283118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 16556569 - 16556445
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| |||||||||   |||||| ||||||  |||||||||||||||||||||||||||     
T  16556569 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgttcggggttcgaaccccgacccctgcacatattgtgcattatccctt 16556470  T
Q  118 actaaatgagttaaactcgtgggac 142  Q
    || ||||||| ||| ||| ||||||    
T  16556469 accaaatgagctaagctcatgggac 16556445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 50815825 - 50815729
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcc 114  Q
    ||||||||  ||| |||||||||||||||  ||||||||||||| ||||||||||  |||||| |||||| ||||||||||| ||||||||||||||    
T  50815825 tcaagtagcctagtggctagagaaattcacctttaagatgaatatgtggggtgtccggggttcgaaccccggcccctgcacaaattgtgcattatcc 50815729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 465
Target Start/End: Original strand, 36858150 - 36858256
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttat 457  Q
    |||||||| |||||||||| |||||||||||||||||| |||| | |||| | ||||| |||| |||| ||||||||||||||||||||| || |||| |    
T  36858150 aagtttataaaatttattcttaagaataacattccttgtaatacacagatgggaatttcattc-aaggtatttaagaaaaatatgtttggataactttgt 36858248  T
Q  458 aatattcc 465  Q
    ||||||||    
T  36858249 aatattcc 36858256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 30790279 - 30790399
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat-agaaattttattctaaggaatttaagaaaaatatgttt 445  Q
    |||||||||| ||||||| |||||||||| ||| || |||||||| ||||||||||||||| ||||| ||||||| || | |||||| ||||| ||||||    
T  30790279 gtgtttgtttcaagtttagcaaatttatttctaggagtaacattc-ttggaatataaagatgagaaa-tttattccaaagtatttaaaaaaaagatgttt 30790376  T
Q  446 ggttacctttataatattccaag 468  Q
    ||||| | |||||||||||||||    
T  30790377 ggttaacattataatattccaag 30790399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 36860100 - 36860027
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattc 420  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||| ||||| || ||||||||||||    
T  36860100 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaacataaaaatggaaattttattc 36860027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 36993145 - 36993036
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || ||||||||||  |||||||||  |||||||||||||| ||||| ||||||||||||||||||||| |  ||||||| |||    
T  36993145 ggctagagaaattcaccttaaagatgaataattggggtgtccggggttcaaaccccaaccccttcacatattgtgcattatcccttatcaaatgagctaa 36993046  T
Q  132 actcgtggga 141  Q
     ||| |||||    
T  36993045 gctcatggga 36993036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 40406951 - 40407060
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccag-cccctgcacatattgtgcattatccctaactaaatgagtta 130  Q
    |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| | ||||||||||||||||||||||||||| || ||||||| ||    
T  40406951 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacccccggcccctgcacatattgtgcattatcccttaccaaatgagcta 40407050  T
Q  131 aactcgtggg 140  Q
    | ||| ||||    
T  40407051 agctcatggg 40407060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 27862840 - 27862906
Alignment:
Q  50 ttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||||| ||||||||||  |||||| |||||||||||||||||| ||||||||||||||||    
T  27862840 ttaagatgaataagtggggtgtccggggttcgaaccccagcccctgcacaaattgtgcattatccct 27862906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 37014724 - 37014611
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    ||||||| |||||||  |||||||||||||||||||| |||  |||||||||||||||   |||||||||| |||  |||||  ||||| ||||||||||    
T  37014724 tttgtttcaagtttacaaaatttattcctaagaataatattttttggaatataaagatgcgaattttattcgaagatatttagaaaaaagatgtttggtt 37014625  T
Q  450 acctttataatatt 463  Q
    | | ||||||||||    
T  37014624 aacattataatatt 37014611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 346 - 455
Target Start/End: Original strand, 38413906 - 38414015
Alignment:
Q  346 cgtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgttt 445  Q
    ||||||||||| ||||||| |||||||| |  ||  ||||||||||||||||||||||||||   ||||| |||| |||| |||||  ||||||||||||    
T  38413906 cgtgtttgtttcaagtttaccaaatttaattttagaaataacattccttggaatataaagatgagaatttaattccaaggtatttagaaaaaatatgttt 38414005  T
Q  446 ggttaccttt 455  Q
    ||||| ||||    
T  38414006 ggttaacttt 38414015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 45355695 - 45355803
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||| ||||  |||||| ||||||  ||||| |||||||||||||||||||||     
T  45355695 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggg-tgtccggggttcgaaccccgacccctacacatattgtgcattatccctt 45355793  T
Q  118 actaaatgag 127  Q
    ||||||||||    
T  45355794 actaaatgag 45355803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 45369436 - 45369544
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||| ||||  |||||| ||||||  ||||| |||||||||||||||||||||     
T  45369436 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggg-tgtccggggttcgaaccccgacccctacacatattgtgcattatccctt 45369534  T
Q  118 actaaatgag 127  Q
    ||||||||||    
T  45369535 actaaatgag 45369544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 22096386 - 22096485
Alignment:
Q  36 agagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactc 135  Q
    |||||||||||  || || ||||||| ||||||||||  | |||| |||| | |||||||||||||||||||||||||||| || |||||| ||||||||    
T  22096386 agagaaattcaccttaaaaatgaataagtggggtgtccggagttcgaacctcggcccctgcacatattgtgcattatcccttaccaaatgaattaaactc 22096485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 25234834 - 25234933
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||| ||| || ||||||||||||  || ||||||||||  |||||||||| |||||| |||| || ||||| ||| |||||||||||||||||    
T  25234834 atcaagtagtctagtggttagagaaattcaccttaaagatgaataactggggtgtctggggttcgaacctcaacccctacacttattgtgcattatccct 25234933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 11491196 - 11491294
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||  |||||| ||| || ||||||||||| ||| ||||||||||||    
T  11491196 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccggcccctgcacaaattatgcattatccct 11491294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 51707237 - 51707125
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||||||| ||| | |||||||||  || |||||||||| ||||| ||| |  ||||| ||||||||||| | |||||||| || |||||||||     
T  51707237 tcaagtagtttagtggccaaagaaattcaccttaaagatgaataagtggg-tgtttgaggttcgaaccccagcccgtacacatattatgtattatccctt 51707139  T
Q  118 actaaatgagttaa 131  Q
    ||||||||||||||    
T  51707138 actaaatgagttaa 51707125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 18405134 - 18405194
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat 407  Q
    |||||||||||||||||  ||||||||||| || ||||||||||||||| |||||||||||    
T  18405134 gtgtttgttttaagtttgccaaatttattcttaggaataacattccttgaaatataaagat 18405194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 51968510 - 51968626
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||| | |  |||||||   |||||||||| |||| || ||  ||||| |||||||    
T  51968510 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttcgtacgtaaagatgagaattttattccaaggtatatagaaaaaagatgtttg 51968609  T
Q  447 gttacctttataatatt 463  Q
     ||| | ||||||||||    
T  51968610 tttaacattataatatt 51968626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 22341839 - 22341934
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatc 113  Q
    ||||||||  |||||| ||||||||||||  ||||||||||| | ||||||||| | || ||  ||||||| ||||| ||||||||||||||||||    
T  22341839 tcaagtagcctagcggttagagaaattcacctttaagatgaacaagtggggtgtttgggatttgaaccccaacccctacacatattgtgcattatc 22341934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 25916357 - 25916302
Alignment:
Q  347 gtgtttgttt-taagtttatcaaatttattcctaagaataacattccttggaatat 401  Q
    |||||||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  25916357 gtgtttgtttctaagtttaccaaatttattcctaggaataacattccttggaatat 25916302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 52366291 - 52366208
Alignment:
Q  52 aagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactc 135  Q
    |||||||||| ||| |||||  | ||||| |||  || ||||||||||||||||||||||||||| || |||||||||||||||    
T  52366291 aagatgaataagtgaggtgttcatggttcgaacttcaacccctgcacatattgtgcattatcccttaccaaatgagttaaactc 52366208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 23449059 - 23448993
Alignment:
Q  50 ttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||| ||||||| |||||||||   |||||| ||||||| |||||||||||||||||||||||||||    
T  23449059 ttaaaatgaataagtggggtgttcggggttcgaaccccaacccctgcacatattgtgcattatccct 23448993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 2832062 - 2832139
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcat 109  Q
    |||||||| ||||||  || |||||||||| ||||||||| | |||||| ||||||  ||||||||||||||||||||    
T  2832062 ggctagaggaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctgcacatattgtgcat 2832139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 424
Target Start/End: Original strand, 32713385 - 32713462
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaag 424  Q
    ||||||||||||||||| ||||||||||| |||| |||||| |||||||  || |||| |||  ||||||||||||||    
T  32713385 gtgtttgttttaagtttgtcaaatttatttctaaaaataacgttccttgatatttaaatatatgaattttattctaag 32713462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 55433305 - 55433212
Alignment:
Q  18 tcaagtagtttagcggctagagaaattca-tttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcatt 110  Q
    ||||||||| | | ||||||||||||||| |||||||  |||||| || |||||||| | |||| ||||||| ||||| |||||||||||||||    
T  55433305 tcaagtagtctggtggctagagaaattcactttttaatgtgaataagttgggtgtctggagttcgaaccccaacccctacacatattgtgcatt 55433212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 13210198 - 13210250
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    |||||| |||||| |||||||||||||||||||||||||||| || |||||||    
T  13210198 gggttcgaaccccggcccctgcacatattgtgcattatccctgaccaaatgag 13210250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 23233935 - 23234047
Alignment:
Q  27 ttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatga 126  Q
    |||| ||||||| ||||||| |||||| ||||||| ||||||||| | | |||  |||| || |||||||||| ||||||||||||  || |  ||||||    
T  23233935 ttagtggctagaaaaattcacttttaatatgaataagtggggtgtttggagtttgaaccacaacccctgcacaaattgtgcattatttcttataaaatga 23234034  T
Q  127 gttaaactcgtgg 139  Q
    ||||| |||||||    
T  23234035 gttaagctcgtgg 23234047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 43084564 - 43084452
Alignment:
Q  19 caagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaa 118  Q
    |||||||||||  |||||||||||||||  || |||||||||| |||||||  | ||| ||| ||||||  |||||  | |||||||||||||| ||| |    
T  43084564 caagtagtttaatggctagagaaattcaccttaaagatgaataagtggggtaaccaggattcgaaccccgacccctatatatattgtgcattattcctta 43084465  T
Q  119 ctaaatgagttaa 131  Q
    | |||||||||||    
T  43084464 ccaaatgagttaa 43084452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 45847917 - 45848001
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||| |||||||||  || |||||||||| ||||||||||  |||||| ||||||   ||||||||||||| ||||||||||||    
T  45847917 ggctaaagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgatccctgcacatattatgcattatccct 45848001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 17329119 - 17329194
Alignment:
Q  37 gagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattat 112  Q
    ||||||||||| || |||| ||||| |||||||||||| |||| ||||| | ||||||||| |||||| |||||||    
T  17329119 gagaaattcatcttaaagaggaataagtggggtgtctatggtttaaacctcggcccctgcatatattgcgcattat 17329194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 43362165 - 43362268
Alignment:
Q  38 agaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgt 137  Q
    |||||||||  || |||||||||| ||||||||||  |||||| ||||||  |||||| | |||||||||||||||||| |  ||||||| ||| ||| |    
T  43362165 agaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgaatatattgtgcattatcccttagcaaatgagctaagctcat 43362264  T
Q  138 ggga 141  Q
    ||||    
T  43362265 ggga 43362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 42154673 - 42154571
Alignment:
Q  29 agcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagt 128  Q
    ||||||||||||||||||  || ||||||| || |||  |||||  |||||| ||||||  || |||||||||||||| ||||||||| || |||| |||    
T  42154673 agcggctagagaaattcaccttaaagatgattaagtgaagtgtccggggttcgaaccccgacctctgcacatattgtgaattatcccttaccaaataagt 42154574  T
Q  129 taa 131  Q
    |||    
T  42154573 taa 42154571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 51974865 - 51974743
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| ||||||| |||||||  || ||||| |||| ||||| ||||   ||||| || |||  |||||||||||||||||||||||||||     
T  51974865 tcaagtagcctagtggctagataaattcaccttaaagataaataagtgggatgtccgaggttcgaatcccgacccctgcacatattgtgcattatccctt 51974766  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  51974765 accaaatgagctaagctcatggg 51974743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 53096512 - 53096593
Alignment:
Q  30 gcggctagagaaattcatttttaag-atgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcatt 110  Q
    ||||| |||||||||||  |||||| ||||||| |||||||||||  ||||| ||| | || ||||||||||||||||||||    
T  53096512 gcggccagagaaattcacctttaaggatgaataagtggggtgtctgaggttcgaacactagtccctgcacatattgtgcatt 53096593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 38690774 - 38690686
Alignment:
Q  28 tagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||||||||||||  || |||  ||||| ||||||||||  |||||| ||||||  |||||||| ||| | ||||||||||||    
T  38690774 tagcggctagagaaattcaccttaaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatccct 38690686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 10401124 - 10401007
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| |||||||||| ||   |||||||||| ||| | |||||| ||   |||||||||| |||  || ||  ||||| |||||||    
T  10401124 gtgtttgttttaagtttaccaaatttatttctggaaataacattctttgaagtataaaaatgagaattttattccaagatatatagaaaaaacatgtttg 10401025  T
Q  447 gttacctttataatattcc 465  Q
    ||||  |||||||||||||    
T  10401024 gtta-gtttataatattcc 10401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 24234084 - 24234130
Alignment:
Q  51 taagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||||| ||||||||||  ||||||||||||| |||||||||    
T  24234084 taagatgaataagtggggtgtccggggttcaaaccccggcccctgca 24234130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 37997852 - 37997902
Alignment:
Q  47 tttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    |||||||| |||||| ||||||||||| |||||| |||||||| |||||||    
T  37997852 tttttaaggtgaataagtggggtgtctggggttcgaaccccagaccctgca 37997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 47426514 - 47426460
Alignment:
Q  411 aattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||||||| |||| |||||  |||||||| |||||||| ||||||||||||||    
T  47426514 aattttattcaaaggtatttagaaaaaatatatttggttaactttataatattcc 47426460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 26885377 - 26885474
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccc 115  Q
    ||||||||  ||| |||||||||||| ||  || ||||| |||| |||| |||||  |||||| |||||| ||||| ||| ||| |||||||||||||    
T  26885377 tcaagtagcctagtggctagagaaatccaccttaaagataaataagtggagtgtccggggttcgaaccccggccccagcatataatgtgcattatccc 26885474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 49635533 - 49635428
Alignment:
Q  35 tagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaact 134  Q
    |||||||||||| ||| || ||||||| ||| | ||| | |||||  || | ||| || |||| |||||||||||||||||| || ||||||| ||||||    
T  49635533 tagagaaattcactttaaaaatgaataagtgagatgtatggggtttgaatctcagtccttgcatatattgtgcattatcccttaccaaatgagctaaact 49635434  T
Q  135 cgtggg 140  Q
    | ||||    
T  49635433 catggg 49635428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 8716599 - 8716563
Alignment:
Q  91 ccctgcacatattgtgcattatccctaactaaatgag 127  Q
    |||||||||||||||||||||||||| || |||||||    
T  8716599 ccctgcacatattgtgcattatcccttaccaaatgag 8716563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 32037680 - 32037584
Alignment:
Q  23 tagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaac 119  Q
    |||||||||||||||||||||||| ||| ||  ||||||  |||| | || ||| ||  ||||||  |||||||| ||| | |||||||||||||||    
T  32037680 tagtttagcggctagagaaattcactttaaatgtgaataaatgggatatccaggatttgaaccccgacccctgcatataatatgcattatccctaac 32037584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 35909039 - 35909115
Alignment:
Q  52 aagatgaataggtggggtgtctagggttcaaaccccag-cccctgcacatattgtgcattatccctaactaaatgag 127  Q
    ||||| |||| ||||||||||| || ||| |||| | | |||||||| |||||||||||||||||| || |||||||    
T  35909039 aagataaataagtggggtgtctgggattcgaacctccgacccctgcatatattgtgcattatcccttacaaaatgag 35909115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 5e-48; HSPs: 102)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 347 - 468
Target Start/End: Complemental strand, 12190521 - 12190400
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  12190521 gtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 12190422  T
Q  447 gttacctttataatattccaag 468  Q
    |||| |||||||||||||||||    
T  12190421 gttagctttataatattccaag 12190400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 9832214 - 9832096
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  9832214 gtgtttgtttcaagtttatcaaatttattcctaggaataacattcctcggaatataaagatgggaattttattccaaggaatttaagaaaaatatgtttg 9832115  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  9832114 gttagctttataatattcc 9832096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 5806620 - 5806502
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  5806620 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 5806521  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  5806520 gttagctttataatattcc 5806502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 8331742 - 8331860
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| || ||||||| ||||||||||||||    
T  8331742 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaagaatttaggaaaaatatgtttg 8331841  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  8331842 gttagctttataatattcc 8331860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 39930185 - 39930303
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  39930185 gtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgggaattttattccaaggaatttaagaaaaatatgtttg 39930284  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  39930285 gttagctttataatattcc 39930303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 46666436 - 46666554
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||    
T  46666436 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatatgtttg 46666535  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  46666536 gttagctttataatattcc 46666554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 25473983 - 25474104
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||| || ||||||| ||||||||||||||    
T  25473983 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaagaatttaggaaaaatatgtttg 25474082  T
Q  447 gttacctttataatattccaag 468  Q
    |||| |||||||||||||||||    
T  25474083 gttagctttataatattccaag 25474104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 6911213 - 6911331
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  6911213 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatgtttg 6911312  T
Q  447 gttacctttataatattcc 465  Q
    |||| |||| |||||||||    
T  6911313 gttagctttttaatattcc 6911331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 9115565 - 9115683
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  9115565 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 9115664  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  9115665 gttagctttataatattcc 9115683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 25789491 - 25789609
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  25789491 gtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 25789590  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  25789591 gttagctttataatattcc 25789609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 32824649 - 32824767
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || ||||  ||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  32824649 gtgtttgtttcaaatttacgaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaagaaaaatatgtttg 32824748  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  32824749 gttagctttataatattcc 32824767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 36361511 - 36361629
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| || | |||||||||| |||||||||| ||||||||||||||    
T  36361511 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaaatgggaattttattccaaggaatttaggaaaaatatgtttg 36361610  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  36361611 gttagctttataatattcc 36361629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 47031587 - 47031705
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  47031587 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 47031686  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  47031687 gttagctttataatattcc 47031705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 51445423 - 51445305
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||   |||||||||| |||||||||| ||||||||||||||    
T  51445423 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatatatagatgagaattttattccaaggaatttaggaaaaatatgtttg 51445324  T
Q  447 gttacctttataatattcc 465  Q
    |||||||||||||||||||    
T  51445323 gttacctttataatattcc 51445305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 14788451 - 14788569
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| | |||||||||  |||||||||| | ||||||||||||    
T  14788451 gtgtttgttttaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggcaaaatatgtttg 14788550  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  14788551 gttagctttataatattcc 14788569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 20260430 - 20260312
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||| |||||| ||||||||||||||    
T  20260430 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagaaatttaggaaaaatatgtttg 20260331  T
Q  447 gttacctttataatattcc 465  Q
     ||| ||||||||||||||    
T  20260330 cttagctttataatattcc 20260312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 38965023 - 38964905
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| |||| |||| ||||    
T  38965023 gtgtttgttttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaatatatctttg 38964924  T
Q  447 gttacctttataatattcc 465  Q
    | || ||||||||||||||    
T  38964923 gatagctttataatattcc 38964905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 52630501 - 52630619
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  52630501 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 52630600  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  52630601 gttagctttataatattcc 52630619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 351 - 464
Target Start/End: Complemental strand, 4683713 - 4683600
Alignment:
Q  351 ttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtta 450  Q
    |||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||| | |||||||||| |||||||||| ||||||||||||||||||    
T  4683713 ttgtttcaagtttatcaaatttatttctaagaataacattttttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttggtta 4683614  T
Q  451 cctttataatattc 464  Q
     |||||||||||||    
T  4683613 gctttataatattc 4683600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 32202657 - 32202539
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||   |||||||||| ||| |||||| ||||||||||||||    
T  32202657 gtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaagaaatttaggaaaaatatgtttg 32202558  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  32202557 gttagctttataatattcc 32202539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 1597686 - 1597569
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||  || ||||||||||||||| ||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  1597686 gtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 1597587  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  1597586 gttaactttataatattc 1597569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 37436963 - 37436846
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| || |||||||||||  ||||  |||| ||||||||||||||    
T  37436963 gtgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaatatggaaattttatttcaaggtgtttaggaaaaatatgtttg 37436864  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  37436863 gttaactttataatattc 37436846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 347 - 458
Target Start/End: Original strand, 2430225 - 2430336
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||  ||||||||||||| ||||||| ||||||||||||||||||| | |||||||||| |||||||||| ||||| ||||||||    
T  2430225 gtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttattccaaggaatttaggaaaattatgtttg 2430324  T
Q  447 gttacctttata 458  Q
    |||| |||||||    
T  2430325 gttagctttata 2430336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 48916366 - 48916247
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattta-agaaaaatatgttt 445  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||   |||||||||| |||| ||||| | ||||||||||||    
T  48916366 gtgtttgtttcaagtttatcaaatttattcttaggaataacattccttagaatataaagatgagaattttattccaaggtatttagaaaaaaatatgttt 48916267  T
Q  446 ggttacctttataatattcc 465  Q
    ||||| ||||||||||||||    
T  48916266 ggttaactttataatattcc 48916247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 50191108 - 50190990
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||| ||||||||||||   |||||||||   ||||||||| ||||||||||||||    
T  50191108 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttatttcgaggaatttaggaaaaatatgtttg 50191009  T
Q  447 gttacctttataatattcc 465  Q
     ||| ||||||||||||||    
T  50191008 attagctttataatattcc 50190990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 465
Target Start/End: Complemental strand, 5518846 - 5518729
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| ||||||| ||||||||||| |  ||||||||||||||||||||||||||| | |||||||||| |||| ||||| |||||||||||| ||    
T  5518846 tgtttgtttgaagtttaccaaatttattcattggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaatatgttcgg 5518747  T
Q  448 ttacctttataatattcc 465  Q
    ||| |||||||| |||||    
T  5518746 ttaactttataacattcc 5518729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 349 - 465
Target Start/End: Original strand, 13653581 - 13653698
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat-agaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||  |||| ||||   ||||||||||||||    
T  13653581 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtatttggaaaaaatatgtttgg 13653680  T
Q  448 ttacctttataatattcc 465  Q
    ||| ||||||||||||||    
T  13653681 ttaactttataatattcc 13653698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 29091400 - 29091516
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||  ||||||||||| | |||||||||| |||| |||||  |||||||||||||    
T  29091400 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttaaaatataaagatgggaattttattccaaggtatttataaaaaatatgtttg 29091499  T
Q  447 gttacctttataatatt 463  Q
    |||| ||||||||||||    
T  29091500 gttaactttataatatt 29091516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 347 - 468
Target Start/End: Complemental strand, 1228223 - 1228100
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattt--aagaaaaatatgtt 444  Q
    |||||||||||||||||| |||||||||| ||| ||||||| |||||||||||||||||||   |||||||||| || ||||||  || |||||||||||    
T  1228223 gtgtttgttttaagtttaccaaatttatttctatgaataaccttccttggaatataaagatgagaattttattccaaagaatttagaaaaaaaatatgtt 1228124  T
Q  445 tggttacctttataatattccaag 468  Q
    |||| | |||||||||||| ||||    
T  1228123 tggtgaactttataatatttcaag 1228100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 358 - 465
Target Start/End: Original strand, 35187195 - 35187302
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttat 457  Q
    ||||||| ||||||||||| || |||||| ||| |||| ||||||||||| ||||||||||||||| ||||||| |||| |||||||||||||  |||||    
T  35187195 aagtttaccaaatttattcttaggaataatatttcttgaaatataaagatggaaattttattctaaagaatttaggaaatatatgtttggttagttttat 35187294  T
Q  458 aatattcc 465  Q
    ||||||||    
T  35187295 aatattcc 35187302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 50011610 - 50011503
Alignment:
Q  33 gctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaa 132  Q
    ||||||||||||||  || |||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||| |||     
T  50011610 gctagagaaattcaccttaaagatgaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaag 50011511  T
Q  133 ctcgtggg 140  Q
    ||| ||||    
T  50011510 ctcatggg 50011503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 34702290 - 34702412
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| ||||| |||||||||| || |||||||||| ||| ||||||  |||||| |||||| ||||||||||||||||||||||||||||     
T  34702290 tcaagtagtctagtggctaaagaaattcatcttaaagatgaataagtgaggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccctt 34702389  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  34702390 accaaatgagctaagctcatggg 34702412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 2632584 - 2632697
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    ||||||| |||||||  ||||||||| ||| |||||||||||||| ||||||||| || | |||||||||| |  ||||||| |||||||||||||||||    
T  2632584 tttgtttcaagtttactaaatttatttctaggaataacattccttagaatataaatatgggaattttattccagcgaatttaggaaaaatatgtttggtt 2632683  T
Q  450 acctttataatatt 463  Q
    | ||||||||||||    
T  2632684 aactttataatatt 2632697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 24134615 - 24134723
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| |||||||||||||||||||||||||||| || ||||||| |||    
T  24134615 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 24134714  T
Q  132 actcgtggg 140  Q
     ||| ||||    
T  24134715 gctcatggg 24134723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 31807091 - 31806975
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||| ||| ||||| |||||||||||| |||||||||| ||| ||||||| ||||||||  |||||||||||||||| |||||  |||||||||||||    
T  31807091 gtgtttatttcaagttgatcaaatttatttctaagaataatatttcttggaacataaagatgaaaattttattctaaggtatttagaaaaaatatgtttg 31806992  T
Q  447 gttacctttataatatt 463  Q
     ||| | ||||||||||    
T  31806991 cttaacattataatatt 31806975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 52699798 - 52699691
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttat 457  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||| |||||  ||||||| ||||| ||| | ||||    
T  52699798 aagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggtatttagaaaaaataagtttgcttaacattat 52699699  T
Q  458 aatattcc 465  Q
    ||||||||    
T  52699698 aatattcc 52699691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 46960356 - 46960477
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat-agaaattttattctaaggaattta-agaaaaatatgtt 444  Q
    |||||||||| || ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| |||  ||||| | ||||| |||||    
T  46960356 gtgtttgtttcaaatttatcaaatttattcctaggaataacattctttggaatataaagatgagaaa-tttattccaagatatttagaaaaaaagatgtt 46960454  T
Q  445 tggttacctttataatattccaa 467  Q
    |||||| | ||||||||||||||    
T  46960455 tggttaacattataatattccaa 46960477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 47651975 - 47651866
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || || ||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||| |||    
T  47651975 ggctagagaaattcaccttaaa-atgaataagtgggatgtctaggattcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaa 47651877  T
Q  132 actcgtgggac 142  Q
     ||| ||||||    
T  47651876 gctcatgggac 47651866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 30735946 - 30735833
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| || ||||||||||||  ||| ||||||||| ||| |||||| ||||||||||| || ||||||||||| ||||||||||||||||     
T  30735946 tcaagtagcctagtggttagagaaattcacctttgagatgaataagtgtggtgtccagggttcaaactccggcccctgcacaaattgtgcattatccctt 30735847  T
Q  118 actaaatgagttaa 131  Q
    || |||||||||||    
T  30735846 accaaatgagttaa 30735833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 47677372 - 47677489
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||| ||| |||||||| |||||||||| || |||||| ||| ||||||||||||||||   |||||||||| |||  |||||| |||||||||||||    
T  47677372 gtgtttatttaaagtttatgaaatttattcttaggaataaaatttcttggaatataaagatgagaattttattccaagatatttaaaaaaaatatgtttg 47677471  T
Q  447 gttacctttataatattc 464  Q
    |||| |||| ||||||||    
T  47677472 gttaactttgtaatattc 47677489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 17475653 - 17475534
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattta-agaaaaatatgttt 445  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||  ||||| ||||| || |||||||||||| |||| ||||| | ||||| ||||||    
T  17475653 gtgttcgtttcaagtttatcaaatttattcctaagaataacattctatggaaaataaaaatggaaattttattccaaggtatttagaaaaaaagatgttt 17475554  T
Q  446 ggttacctttataatattcc 465  Q
    | ||| | |||| |||||||    
T  17475553 gcttaacattatgatattcc 17475534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 47428872 - 47428995
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    |||| ||| |||| ||||| ||||||||| ||| |||||||||| ||||||||| | |||||| ||||||||||| ||||||||||||| | |||||||     
T  47428872 tcaaatagcttagtggctaaagaaattcactttaaagatgaataagtggggtgtttggggttcgaaccccagcccatgcacatattgtgtactatccctt 47428971  T
Q  118 actaaatgagttaaactcgtggga 141  Q
    || | ||||| ||||||| |||||    
T  47428972 accagatgagctaaactcatggga 47428995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 42946444 - 42946542
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  || ||||||||||||||||  |||||| |||||| ||||||||||  ||||||||||||||||||||||| ||| | ||||||||||||    
T  42946444 tcaagtagcctaacggctagagaaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatataatatgcattatccct 42946542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 49620090 - 49619968
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| ||||||||||||||| ||| |||||||||| ||||||||||  ||||   ||||||  |||||||||||||||||||||||||||     
T  49620090 tcaagtagcctagtggctagagaaattcactttaaagatgaataagtggggtgtccggggtctgaaccccgacccctgcacatattgtgcattatccctt 49619991  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  49619990 accaaatgagctaagctcatggg 49619968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 7438739 - 7438614
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| ||||| |||||||||  ||||||||||||| ||||||||||  | |||| ||||||  ||||| |||| ||||||||||||||||     
T  7438739 tcaagtagtctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggagttcgaaccccgacccctacacaaattgtgcattatccctt 7438640  T
Q  118 actaaatgagttaaactcgtgggaca 143  Q
    || ||||||| ||| ||| |||||||    
T  7438639 accaaatgagctaagctcatgggaca 7438614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 14262698 - 14262823
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    |||| ||| |||| |||||||||||||||  || |||||||||| || |||||||  |||||| ||||||  |||||||| ||||||||||||||||||     
T  14262698 tcaaatagcttagtggctagagaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacccctgcatatattgtgcattatccctt 14262797  T
Q  118 actaaatgagttaaactcgtgggaca 143  Q
    |  ||||||||||| ||| |||||||    
T  14262798 atcaaatgagttaatctcatgggaca 14262823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 25421971 - 25421850
Alignment:
Q  20 aagtagtttagcggctagagaaattcat-ttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaa 118  Q
    ||||||||||| || ||||||||||||  ||||||| |||||| |||| |||||| |||||  ||||||||||||| |||| |||||||||| ||||| |    
T  25421971 aagtagtttagtggttagagaaattcaccttttaaggtgaataagtggagtgtctggggtttgaaccccagcccctacacaaattgtgcattgtccctta 25421872  T
Q  119 ctaaatgagttaaactcgtggg 140  Q
    | ||||||||||| ||| ||||    
T  25421871 ccaaatgagttaagctcatggg 25421850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 49823203 - 49823122
Alignment:
Q  384 taacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||||||||||||||||||||| | |||||||||| | ||||||||  |||||||||||||||||  |||||||||||||    
T  49823203 taacattccttggaatataaagatgggaattttattccatggaatttagaaaaaatatgtttggttaggtttataatattcc 49823122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 347 - 407
Target Start/End: Complemental strand, 24116678 - 24116618
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat 407  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  24116678 gtgtttgttttaagtttaacaaatttattcttaagaataacattccttagaatataaagat 24116618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 52720803 - 52720704
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||| ||| || |||||||||||| ||| |||||||||| ||| ||||||| |||||| |||||||| |||| |||| ||| ||||||||||||    
T  52720803 atcaagtagtctagtggttagagaaattcactttaaagatgaataagtgtggtgtctggggttcgaaccccagtccctacacacattatgcattatccct 52720704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 15417810 - 15417916
Alignment:
Q  34 ctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaac 133  Q
    |||||||||||||| || |||||||||| ||||||||||   | ||| ||||||||||||| ||||||||||||||||||| | || ||||||| ||| |    
T  15417810 ctagagaaattcatcttaaagatgaataagtggggtgtccgagcttcgaaccccagcccctacacatattgtgcattatcctttaccaaatgagctaagc 15417909  T
Q  134 tcgtggg 140  Q
    || ||||    
T  15417910 tcatggg 15417916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 40061561 - 40061439
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||| ||  || |||||||||| ||||||||||  | |||| |||||||||||||  |||||||||||| |||||||     
T  40061561 tcaagtagcctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggagttcgaaccccagcccctatacatattgtgcactatccctt 40061462  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||||||| ||| ||||    
T  40061461 accaaatgagttaagctcatggg 40061439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 2017662 - 2017770
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||||||| |||||||||||||||  || || ||||| | ||||||||||  || ||| ||||||||||  |||||||||||||||||||||||     
T  2017662 tcaagtagtttagtggctagagaaattcaccttaaa-atgaacaagtggggtgtccgggattcgaaccccagcctatgcacatattgtgcattatccctt 2017760  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  2017761 accaaatgag 2017770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 43109215 - 43109324
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || ||||||||||  || ||||||  |||||| |||||| ||||||||||||||| ||||||||||||     
T  43109215 tcaagtagcctagtggctagagaaattcaccttaaagatgaataaatgaggtgtccggggttcgaaccccggcccctgcacatattttgcattatccctt 43109314  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  43109315 accaaatgag 43109324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 48462263 - 48462375
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    ||||||||||||||||||||||||||  || ||||||||||| ||||| |||||||||   |||| ||||| ||   |||||  ||||||||||||||||    
T  48462263 tttgttttaagtttatcaaatttatttttatgaataacattctttggagtataaagatgagaattatattccaa-atatttagaaaaaatatgtttggtt 48462361  T
Q  450 acctttataatatt 463  Q
    | ||||||||||||    
T  48462362 aactttataatatt 48462375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 49627302 - 49627419
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaaga-aaaatatgttt 445  Q
    |||||||||| || |||| ||||||||||  ||||||||||||| |||||||||||||||| | ||||||||| ||  | |||||| | |||| ||||||    
T  49627302 gtgtttgtttcaaatttaccaaatttatttttaagaataacatttcttggaatataaagatgggaattttattgtagagtatttaaaagaaaaaatgttt 49627401  T
Q  446 ggttacctttataatatt 463  Q
    ||||| | ||||||||||    
T  49627402 ggttaacattataatatt 49627419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 50302830 - 50302942
Alignment:
Q  20 aagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagccc-ctgcacatattgtgcattatccctaa 118  Q
    ||||||| ||| |||||||||||||||  || |||||||||| || | ||||| ||||||| ||||||||||| ||||||||||| |||||||||||| |    
T  50302830 aagtagtctagtggctagagaaattcaccttaaagatgaataagtagagtgtc-agggttcgaaccccagccctctgcacatattatgcattatccctta 50302928  T
Q  119 ctaaatgagttaaa 132  Q
    | ||||||| ||||    
T  50302929 ccaaatgagctaaa 50302942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 3939229 - 3939345
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||||||||| ||||  || ||||||||||| |||||||||||| |    ||||||||| ||||  |||||| ||||| |||||||    
T  3939229 gtgtttgttttaagtttatcaaatatatttttaggaataacattctttggaatataaaaaagtgaattttattttaagatatttaaaaaaaacatgtttg 3939328  T
Q  447 gttacctttataatatt 463  Q
     ||| | ||||||||||    
T  3939329 attaacattataatatt 3939345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 37261547 - 37261667
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||||||||||||||  || || |||||||| |||||||||||| ||   ||||||||||| ||  |||||  ||||| |||||||    
T  37261547 gtgtttgtttcaagtttatcaaatttatttttatgattaacattcattggaatataaatatgtgaattttattcttagatatttagaaaaaagatgtttg 37261646  T
Q  447 gttacctttataatattccaa 467  Q
    ||||   ||||||||||||||    
T  37261647 gttaatattataatattccaa 37261667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 50065126 - 50065030
Alignment:
Q  20 aagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||| |||| |||||||||||||||  || |||||||||| ||||||||||   | ||| |||||| | ||||||||||||||||||||||||||    
T  50065126 aagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtccgagattcgaaccccggtccctgcacatattgtgcattatccct 50065030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 9011506 - 9011385
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattt---aagaaaaatatgt 443  Q
    |||||||||||||||||||||||||||||  || |||||| |||||| |||| ||||||||  ||||||| |||||| | ||||   || ||||| ||||    
T  9011506 gtgtttgttttaagtttatcaaatttatttttaggaataatattcctcggaacataaagatgaaaattttcttctaaagtatttagaaaaaaaaaaatgt 9011407  T
Q  444 ttggttacctttataatattcc 465  Q
    ||| ||| | ||||||||||||    
T  9011406 ttgcttaacattataatattcc 9011385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 48497190 - 48497313
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| ||||||||||||| |  || ||||||||||  ||| |||||  || ||| ||| || ||||||||||||||||||||||||||||     
T  48497190 tcaagtagcctagtggctagagaaatttaccttaaagatgaataaatggagtgtccgggattcgaactccggcccctgcacatattgtgcattatccctt 48497289  T
Q  118 actaaatgagttaaactcgtggga 141  Q
    || ||||||| ||||||| |||||    
T  48497290 accaaatgagctaaactcatggga 48497313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 4127017 - 4126895
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| ||||||| |||||||  || ||||||||||  |||||||||  | ||||||||  | ||| ||||| ||||||||||||||||||     
T  4127017 tcaagtagtctagtggctagataaattcaccttaaagatgaataaatggggtgtccggtgttcaaacatcggcctctgcatatattgtgcattatccctt 4126918  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||||||| ||||    
T  4126917 accaaatgagctaaactcatggg 4126895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 450
Target Start/End: Complemental strand, 13932216 - 13932111
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatt--taagaaaaatatgtt 444  Q
    |||||||||| |||||||||||||||||| | | ||||||||||| ||| ||||||||||| |||| ||||||  |||| |||   || |||||||||||    
T  13932216 gtgtttgtttcaagtttatcaaatttatttcaaggaataacattcattgaaatataaagatggaaactttatttcaaggtattcagaaaaaaaatatgtt 13932117  T
Q  445 tggtta 450  Q
    ||||||    
T  13932116 tggtta 13932111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 22386261 - 22386335
Alignment:
Q  66 gggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||||| |||||| ||||||| |||||||||||||||||||| |||||| || ||||||| ||| ||||||||    
T  22386261 gggtgtctggggttcgaaccccaacccctgcacatattgtgcataatcccttaccaaatgagctaagctcgtggg 22386335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 8893959 - 8893870
Alignment:
Q  37 gagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatga 126  Q
    ||||||||||  || |||||||||| ||||||||| | |||||| ||||||  |||||| |||||||||||||||||||| || ||||||    
T  8893959 gagaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctgtacatattgtgcattatcccttaccaaatga 8893870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 10123030 - 10123142
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||| | |||||| ||||||  ||||| ||||||||||  |||||||||     
T  10123030 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctacacatattgt-aattatccctt 10123128  T
Q  118 actaaatgagttaa 131  Q
    || |||||||||||    
T  10123129 accaaatgagttaa 10123142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 460
Target Start/End: Complemental strand, 19923807 - 19923694
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||| ||||||||||||  ||  ||||||||| ||| ||| ||||||||   ||||||||||||||  |||||  |||||||||||||    
T  19923807 gtgtttgttttaagttcatcaaatttatttttagaaataacatttcttagaacataaagatgagaattttattctaagatatttagaaaaaatatgtttg 19923708  T
Q  447 gttacctttataat 460  Q
     ||| | |||||||    
T  19923707 tttaacattataat 19923694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 39329350 - 39329403
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaata 400  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  39329350 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaata 39329403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 467
Target Start/End: Complemental strand, 45813727 - 45813618
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttat 457  Q
    ||||||||||||||||||| || ||||||||||| ||| |||||||||||   ||||||||| ||||| |||||  ||||| || ||| ||||   ||||    
T  45813727 aagtttatcaaatttattcttaggaataacattcattgaaatataaagatgtgaattttattttaaggtatttagaaaaaagatattttgttaagattat 45813628  T
Q  458 aatattccaa 467  Q
    ||||||||||    
T  45813627 aatattccaa 45813618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 415 - 465
Target Start/End: Complemental strand, 3572841 - 3572791
Alignment:
Q  415 ttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  3572841 ttattccaaggaatttaggaaaaatatgtttggttagctttataatattcc 3572791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 6978562 - 6978616
Alignment:
Q  411 aattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||    
T  6978562 aattttattccaagaaatttaggaaaaatatgtttggttagctttataatattcc 6978616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 12973255 - 12973377
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| ||||| ||||||| |  || |||||||||| ||||||||||  | |||  || | | ||||||||| ||||||||||||||||||     
T  12973255 tcaagtagtctagtggctaaagaaatttaccttaaagatgaataagtggggtgtcaggagtttgaatctcggcccctgcatatattgtgcattatccctt 12973354  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||||||| ||||    
T  12973355 accaaatgagctaaactcatggg 12973377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 19424164 - 19424066
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  |||||||||||||||||||  || ||| |||||| ||||||||||  |||||| ||||||  |||||||| ||| | ||||||||||||    
T  19424164 tcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatccct 19424066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 25031488 - 25031582
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatga 126  Q
    |||||||||||||||  || |||||||||| ||||||||||  |  ||| |||||| ||||||||||||||| ||||||||| || || ||||||    
T  25031488 ggctagagaaattcaccttaaagatgaataagtggggtgtccggaattcgaaccccggcccctgcacatattatgcattatctcttaccaaatga 25031582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 52186338 - 52186268
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattc 420  Q
    ||||||||||||||| ||||||||||   | |||||||||||||||||||||||||||   ||||||||||    
T  52186338 tttgttttaagtttaccaaatttattttaaggaataacattccttggaatataaagatgagaattttattc 52186268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 27054814 - 27054686
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtcta------gggttcaaaccccagcccctgcacatattgtgcatta 111  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||| |||| |||      |||||| |||||| ||||||||| |||||||||||||    
T  27054814 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgaggtgcctatgccgggggttcgaaccccggcccctgcagatattgtgcatta 27054715  T
Q  112 tccctaactaaatgagttaaactcgtggg 140  Q
    ||||| || ||||||| ||| ||| ||||    
T  27054714 tcccttaccaaatgagctaagctcatggg 27054686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 29936672 - 29936753
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatc 113  Q
    ||||||||||||||| |||||||||||||| ||||||||||  | |||| ||| ||  |||||||||| || ||||||||||    
T  29936672 ggctagagaaattcacttttaagatgaataagtggggtgtccggagttcgaactccgacccctgcacaaatcgtgcattatc 29936753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 38519404 - 38519287
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || |||| ||||||||||| || ||||||||||  |||||| ||||| ||  ||||||||||| || | |||||  ||||| |||||||    
T  38519404 gtgtttgtttcaaatttaccaaatttattcgtaggaataacattttttggaacataaaaatgaaaattttattccaatgtatttagaaaaaagatgtttg 38519305  T
Q  447 gttacctttataatattc 464  Q
     ||| | |||||||||||    
T  38519304 tttaacattataatattc 38519287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 392
Target Start/End: Complemental strand, 49824067 - 49824022
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattcc 392  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  49824067 gtgtttgtttcaagtttatcaaatttattcctaggaataacattcc 49824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 3797944 - 3797897
Alignment:
Q  47 tttttaagatgaataggtggggtgtctagggttcaaaccccagcccct 94  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||    
T  3797944 tttttaaggtgaataagtggggtgtctagggttcgaaccccagcccct 3797897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 12148568 - 12148675
Alignment:
Q  36 agagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactc 135  Q
    |||||||||||  || |||||||||| ||||||||||| |||||  ||| ||  |||||||||||||||| ||||||| || |  ||||||| ||| |||    
T  12148568 agagaaattcaccttaaagatgaataagtggggtgtctggggtttgaactccgacccctgcacatattgtacattatcgcttataaaatgagctaagctc 12148667  T
Q  136 gtgggaca 143  Q
     |||||||    
T  12148668 atgggaca 12148675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 29332402 - 29332323
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||  |||||||||||||||||||  || ||| |||||| ||||||||||  ||||||||||||| |||| ||||    
T  29332402 tcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccggcccatgca 29332323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 464
Target Start/End: Complemental strand, 13048578 - 13048496
Alignment:
Q  382 aataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattc 464  Q
    ||||||||| ||||||| ||||||| || |||||||| |||||| ||||||  |||||||||||| ||| | | |||||||||    
T  13048578 aataacatttcttggaacataaagaaaggaattttatgctaaggtatttaaagaaaatatgtttgcttaacatgataatattc 13048496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 464
Target Start/End: Complemental strand, 13053575 - 13053493
Alignment:
Q  382 aataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattc 464  Q
    ||||||||| ||||||| ||||||| || |||||||| |||||| ||||||  |||||||||||| ||| | | |||||||||    
T  13053575 aataacatttcttggaacataaagaaaggaattttatgctaaggtatttaaagaaaatatgtttgcttaacatgataatattc 13053493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 22779342 - 22779272
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaacccc 87  Q
    |||||||||| ||  ||||||||||||||||||| ||| |||||| ||||||||| | |||||| ||||||    
T  22779342 atcaagtagtctattggctagagaaattcattttaaaggtgaataagtggggtgtttggggttcgaacccc 22779272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 30325020 - 30325117
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||||||| |||||||||||||||| || ||||||||||  | |||||| | | |||| | || || ||||| |||||||| ||||||||||||    
T  30325020 tcaagtagtttagtggctagagaaattcatcttaaagatgaataaatagggtgt-tcgagttcgagcctcaacccctacacatattatgcattatccct 30325117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 462
Target Start/End: Original strand, 45771820 - 45771937
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattt--aagaaaaatatgtt 444  Q
    |||||||||| ||||||| |||||||||||| | ||||||| || ||||||| |||||| |   |||||||||| |||| ||||  || ||||| |||||    
T  45771820 gtgtttgtttcaagtttaccaaatttattcccatgaataacctttcttggaacataaaggtgagaattttattccaaggtatttagaaaaaaaagatgtt 45771919  T
Q  445 tggttacctttataatat 462  Q
    || ||| | |||||||||    
T  45771920 tgtttaacattataatat 45771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 52164421 - 52164471
Alignment:
Q  91 ccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggga 141  Q
    ||||||||||||||||||||||| || || ||||||||||| |||||||||    
T  52164421 ccctgcacatattgtgcattatctcttaccaaatgagttaagctcgtggga 52164471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 465
Target Start/End: Original strand, 30240782 - 30240857
Alignment:
Q  388 attccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||||| |||||||| || |||||||||||| ||  | ||||| ||||||||||||||||| ||||||||||||||    
T  30240782 attccttgaaatataaaaatggaaattttattccaaata-tttaa-aaaaatatgtttggttaactttataatattcc 30240857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 39329406 - 39329454
Alignment:
Q  417 attctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||| ||||||||||  ||||||||||||||||| ||||||||||||||    
T  39329406 attccaaggaatttagaaaaaatatgtttggttagctttataatattcc 39329454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 13521053 - 13521112
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat 407  Q
    |||||| |||||||||| ||||||||||| ||| ||||||||||  | ||||||||||||    
T  13521053 tgtttgatttaagtttaccaaatttattcttaaaaataacattcactagaatataaagat 13521112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 27160543 - 27160496
Alignment:
Q  88 agcccctgcacatattgtgcattatccctaactaaatgagttaaactc 135  Q
    |||||||||| ||||| |||||||||||| |||||||||| |||||||    
T  27160543 agcccctgcatatattatgcattatcccttactaaatgagctaaactc 27160496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 9527511 - 9527465
Alignment:
Q  51 taagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||||| |||||||||| ||||||||||||||  ||||||||    
T  9527511 taagatgaataagtggggtgtccagggttcaaaccccgacccctgca 9527465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 25800330 - 25800408
Alignment:
Q  38 agaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||  ||||||||||||| ||||||||||  |||||  |||||| | |||| || | ||||||||||||||||    
T  25800330 agaaattcacctttaagatgaataagtggggtgtccggggttggaaccccggaccctacataaattgtgcattatccct 25800408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 48522286 - 48522240
Alignment:
Q  260 ttcatttattataatagtatagatataagatgaaattttaatatgaa 306  Q
    ||||||||| ||||||||| |||||||||||| ||| ||||||||||    
T  48522286 ttcatttataataatagtagagatataagatggaatcttaatatgaa 48522240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 3347696 - 3347793
Alignment:
Q  34 ctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||  || |||||||||| |||||||||   |||||| ||||||  | |||| ||||||||| |||||||| | || ||||| |||||    
T  3347696 ctagagaaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccgactcctgaacatattgtacattatccattaccaaatgtgttaa 3347793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 33931296 - 33931212
Alignment:
Q  34 ctagagaaattca--tttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||||||  ||||||| ||||||| |||| |||||  |||||| |||| || ||| |||||| ||| ||||||||||||    
T  33931296 ctagagaaattcacatttttaatatgaataagtggtgtgtccggggttcgaaccacaacccttgcacaaattatgcattatccct 33931212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 37726810 - 37726859
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttgg 396  Q
    |||||||||| ||||| |  ||||||||||||| ||||||||||||||||    
T  37726810 gtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 37726859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 47845475 - 47845422
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaata 400  Q
    ||||||||||||| |||||||||||||||  ||  ||||||||| |||||||||    
T  47845475 gtgtttgttttaactttatcaaatttatttttagcaataacatttcttggaata 47845422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 2643821 - 2643861
Alignment:
Q  47 tttttaagatgaataggtggggtgtctagggttcaaacccc 87  Q
    |||||||| |||||| ||||||||||| |||||||||||||    
T  2643821 tttttaaggtgaataagtggggtgtctggggttcaaacccc 2643861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 31964593 - 31964661
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccc 86  Q
    |||||||| |||||||||||| ||||| | ||| |||||||||| ||| |||||   ||||||||||||    
T  31964593 tcaagtagcttagcggctagaaaaatttactttaaagatgaataagtgaggtgttcggggttcaaaccc 31964661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 44565772 - 44565890
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  44565772 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaaggaatttaggaaaaatatgtttg 44565871  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  44565872 gttagctttataatattcc 44565890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 45265392 - 45265274
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  45265392 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 45265293  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  45265292 gttagctttataatattcc 45265274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 27214199 - 27214081
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  27214199 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatgtttg 27214100  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  27214099 gttagctttataatattcc 27214081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 28904530 - 28904412
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||    
T  28904530 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatatgtttg 28904431  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  28904430 gttaactttataatattcc 28904412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 33378561 - 33378679
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  33378561 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatgtttg 33378660  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  33378661 gttagctttataatattcc 33378679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 34930811 - 34930693
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  34930811 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatgtttg 34930712  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  34930711 gttagctttataatattcc 34930693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 35488533 - 35488415
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  35488533 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 35488434  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  35488433 gttagctttataatattcc 35488415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 45448669 - 45448787
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  45448669 gtgtttgtttcaagtttaccaaatttattcctatgaataacattccttggaatataaagatgggaattttattctaaagaatttaggaaaaatatgtttg 45448768  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  45448769 gttagctttataatattcc 45448787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 48313849 - 48313970
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||||||    
T  48313849 gtgtttgtttcaagtttatcaaatttatttctaggaataacatttcttggaatataaagatgagaattttattctaaggaatttaggaaaaatatgtttg 48313948  T
Q  447 gttacctttataatattccaag 468  Q
    |||| |||||||||||||||||    
T  48313949 gttagctttataatattccaag 48313970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 350 - 465
Target Start/End: Original strand, 43948975 - 43949090
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||||||||    
T  43948975 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttggtt 43949074  T
Q  450 acctttataatattcc 465  Q
    | ||||||||||||||    
T  43949075 agctttataatattcc 43949090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 11329720 - 11329838
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  11329720 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 11329819  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  11329820 gttagctttataatattcc 11329838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 25924981 - 25924863
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  25924981 gtgtttgtttcatgtttaccaaatttattcctaagaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 25924882  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  25924881 gttagctttataatattcc 25924863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 27248020 - 27248138
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||| |||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  27248020 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 27248119  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  27248120 gttagctttataatattcc 27248138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 30686335 - 30686217
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||  ||||||||||  |||| ||||| ||||||||||||||    
T  30686335 gtgtttgttttaagtttatcaaatttatttctaggaataacattccttggaatataaagatgaaaattttattgcaaggtatttaggaaaaatatgtttg 30686236  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  30686235 gttaactttataatattcc 30686217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 38396709 - 38396592
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  38396709 gtgtttgtttcaagtttatcaaatttattcctaggaatagcattcattggaatataa-gataggaattttattccaaggaatttaagaaaaatatgtttg 38396611  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  38396610 gttagctttataatattcc 38396592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 48160917 - 48160799
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  48160917 gtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatgtttg 48160818  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  48160817 gttagctttataatattcc 48160799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 45045353 - 45045471
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || |||||| |||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  45045353 gtgtttgtttcaagtttaccaaatttattcttaggaataatattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 45045452  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  45045453 gttagctttataatattcc 45045471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 48341091 - 48341208
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||  | |||||||||| |||||||||| ||||||||||||||    
T  48341091 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaga-gggaattttattccaaggaatttatgaaaaatatgtttg 48341189  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  48341190 gttaactttataatattcc 48341208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 348 - 464
Target Start/End: Original strand, 18823890 - 18824006
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||||||||   ||||||||||||||| ||||| |||||||||||||||    
T  18823890 tgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattctaaggtatttaggaaaaatatgtttgg 18823989  T
Q  448 ttacctttataatattc 464  Q
    ||| |||||||||||||    
T  18823990 ttaactttataatattc 18824006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 348 - 465
Target Start/End: Original strand, 39553910 - 39554028
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaag-aaaaatatgtttg 446  Q
    ||||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||| | |||||||||| |||||||||| | |||||||| ||||    
T  39553910 tgtttgtttgaagtttatcaaatttattcttagtaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaaatatttttg 39554009  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  39554010 gttagctttataatattcc 39554028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 37534446 - 37534329
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||   |||||||||  |||| ||||| ||||||||||||||    
T  37534446 gtgtttgtttcaagtttatcaaatttatttctagaaataacattccttggaatataaagatgagaattttatttcaaggtatttaggaaaaatatgtttg 37534347  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  37534346 gttaactttataatattc 37534329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 9947335 - 9947217
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattta-agaaaaatatgttt 445  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||| ||||||||||| | |||||||||| ||||||| || | ||||||||||||    
T  9947335 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgtaatataaagatgggaattttattccaaggaatgtagaaaaaaatatgttt 9947236  T
Q  446 ggttacctttataatattc 464  Q
    ||||| |||||||||||||    
T  9947235 ggttagctttataatattc 9947217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 348 - 465
Target Start/End: Original strand, 25097796 - 25097914
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattcctt-ggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    ||||||||||||||||| |||||||||||||| |||||| |||  || |||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  25097796 tgtttgttttaagtttaccaaatttattcctaggaataatatttttttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 25097895  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  25097896 gttagctttataatattcc 25097914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 27419568 - 27419450
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||  || |||||||||| |||||||||||||||| | |||||||||| || |||||||  |||||||||||||    
T  27419568 gtgtttgtttcaagtttaccaaatttatttttaggaataacatttcttggaatataaagatgggaattttattccaaagaatttagaaaaaatatgtttg 27419469  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  27419468 gttagctttataatattcc 27419450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 41632703 - 41632590
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||     ||||||||||||| |||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  41632703 gtgtttgtttcaagtttaccaaatttattc-----aataacattcctttgaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 41632609  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  41632608 gttagctttataatattcc 41632590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 12166200 - 12166091
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    |||||||||||||  ||||||||||||||  || |||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||||||||||     
T  12166200 tcaagtagtttagtagctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatccctt 12166101  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  12166100 accaaatgag 12166091  T

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Target: chr7; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 370 - 465
Target Start/End: Complemental strand, 9814535 - 9814440
Alignment:
Q  370 tttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||||||| |||||||||| ||||||||||||||||   ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  9814535 tttattcctaggaataacatttcttggaatataaagatgacaattttattctaaggaatttaggaaaaatatgtttgattagctttataatattcc 9814440  T

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Target: chr7; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 358 - 465
Target Start/End: Original strand, 38543932 - 38544039
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttat 457  Q
    |||||||  |||||||||| || |||||||||||||||||||||||||||   |||||||||| ||| |||||| |||||||||||||||||| ||||||    
T  38543932 aagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaagaaatttaggaaaaatatgtttggttagctttat 38544031  T
Q  458 aatattcc 465  Q
    ||||||||    
T  38544032 aatattcc 38544039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 346 - 465
Target Start/End: Original strand, 44819980 - 44820099
Alignment:
Q  346 cgtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgttt 445  Q
    ||||||||||| ||||||| ||||||||||  || ||||||||||||||  |||||||||||   |||||||||| |||||||||| ||||||||| |||    
T  44819980 cgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttaaaatataaagatgagaattttattccaaggaatttaggaaaaatatattt 44820079  T
Q  446 ggttacctttataatattcc 465  Q
    ||||| ||||||||||||||    
T  44820080 ggttagctttataatattcc 44820099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 381 - 465
Target Start/End: Complemental strand, 8419899 - 8419815
Alignment:
Q  381 gaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||||||||||||||||||| | |||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||    
T  8419899 gaataacattccttggaatataaagatgggaattttattccaagaaatttaggaaaaatatgtttggttagctttataatattcc 8419815  T

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Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 34322015 - 34322099
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||||||||  |||||||||||||  |||||||||| || |||||||||||| ||||||||||||||||||||||||||    
T  34322015 ggctagagaaattcacgtttaagatgaataaatggggtgtctgggattcaaaccccagtccctgcacatattgtgcattatccct 34322099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 40273925 - 40273817
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| |||||||||||||||||||||||||||| || ||||||| |||    
T  40273925 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 40273826  T
Q  132 actcgtggg 140  Q
     ||| ||||    
T  40273825 gctcatggg 40273817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 462
Target Start/End: Original strand, 31598450 - 31598565
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| ||||||||||  |  |||||||||| |||||||||||||||||| |||||||||  |||| |||||| ||||| |||||||    
T  31598450 gtgtttgttttaagtttaccaaatttatttttgggaataacatttcttggaatataaagataggaattttatttcaaggtatttaaaaaaaagatgtttg 31598549  T
Q  447 gttacctttataatat 462  Q
     ||| | |||||||||    
T  31598550 tttaacattataatat 31598565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 4956069 - 4956167
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| |||||||||| ||||||| ||||||  |||||||||||||||||||||||||||    
T  4956069 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccagggttcgaaccccgacccctgcacatattgtgcattatccct 4956167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 24030102 - 24029981
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| |||||||||||||||  || ||||||||||  |||||||||| |||||| |||||| |||||| |||||||||||||||||||||     
T  24030102 tcaagtagtctag-ggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaaccccggcccctacacatattgtgcattatccctt 24030004  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    |  ||||||| ||||||| ||||    
T  24030003 atcaaatgagctaaactcatggg 24029981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 38378337 - 38378239
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||| |||| || ||||||||||||  || || ||||||| ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  38378337 tcaagtagcttagtgggtagagaaattcaccttaaaaatgaataagtggggtgtccggggttcaaaccccggcccctgcacatattgtgcattatccct 38378239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 48433687 - 48433809
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||  |||||  |||||| ||||||||||||||||||||||||||||     
T  48433687 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggtttgaaccccggcccctgcacatattgtgcattatccctt 48433786  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  48433787 accaaatgagctaagctcatggg 48433809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 348 - 464
Target Start/End: Complemental strand, 43446224 - 43446109
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| |||| || |||||| ||| ||| ||||||||||  | ||||||||||||||| ||||||||| ||||| |||| ||||||||||||||||    
T  43446224 tgtttgtttaaagtgtaccaaattgatttctatgaataacatttatcggaatataaagataggaattttattttaaggtattt-agaaaaatatgtttgg 43446126  T
Q  448 ttacctttataatattc 464  Q
    ||| | |||||||||||    
T  43446125 ttaacattataatattc 43446109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 3961400 - 3961507
Alignment:
Q  33 gctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaa 132  Q
    ||||||||||||||  ||||| ||||||| ||||| ||||  |||||| |||||| ||| ||||||| |||||||||||||| | || ||||||||||||    
T  3961400 gctagagaaattcacctttaaaatgaataagtgggatgtccggggttcgaaccccggcctctgcacaaattgtgcattatcctttaccaaatgagttaaa 3961499  T
Q  133 ctcgtggg 140  Q
    ||||||||    
T  3961500 ctcgtggg 3961507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 31922070 - 31921952
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatag--aaattttattctaaggaatttaagaaaaatatgtt 444  Q
    |||||||||| |||||||||||||||||| | | ||||||||||| |||||||||||| || |   |||||||||| |||| |||||  ||||||||||     
T  31922070 gtgtttgtttcaagtttatcaaatttattaccatgaataacattctttggaatataaatatgggagaattttattccaaggtatttagaaaaaatatgta 31921971  T
Q  445 tggttacctttataatatt 463  Q
    |||||| ||||||||||||    
T  31921970 tggttaactttataatatt 31921952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 26455982 - 26456104
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| |||||||||||||||  |||||| ||||||  ||| |||||| ||||||||||  ||| |||||||||||||||||||| |||||     
T  26455982 tcaagtagtctagtggctagagaaattcacctttaaggtgaataactggagtgtctggggttcaaacgtcagtccctgcacatattgtgcattgtccctt 26456081  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  26456082 accaaatgagctaagctcatggg 26456104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 465
Target Start/End: Original strand, 40212657 - 40212734
Alignment:
Q  388 attccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||| |||||||||||||   |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  40212657 attcctaggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttggttagctttataatattcc 40212734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 468
Target Start/End: Complemental strand, 17276503 - 17276381
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || ||||  ||||||||| ||| |||||||||||||||||||||| ||||  ||||||||||| |||  |||||  ||||| |||||||    
T  17276503 gtgtttgtttcaattttacaaaatttatttctaggaataacattccttggaatatatagatgtaaattttattccaagatatttagaaaaaagatgtttg 17276404  T
Q  447 g-ttacctttataatattccaag 468  Q
    | ||| | |||||||||||||||    
T  17276403 gtttaacattataatattccaag 17276381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 27454130 - 27454004
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcat-ttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| |||||||||||||||  |||||||||||||| ||||||||||   ||||| |||| |  |||||||||| ||||||||||||||||    
T  27454130 tcaagtagcctagtggctagagaaattcaccttttaagatgaataagtggggtgtccgaggttcgaacctcgacccctgcacaaattgtgcattatccct 27454031  T
Q  117 aactaaatgagttaaactcgtgggaca 143  Q
     || ||||||| ||| ||| |||||||    
T  27454030 taccaaatgagctaagctcatgggaca 27454004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 48619913 - 48619792
Alignment:
Q  19 caagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaa 118  Q
    ||||||| |||| |||||||||||||||  || |||||||||| |||| ||||||   |||| ||||| | |||||||||||||||| |||||||| | |    
T  48619913 caagtagcttagtggctagagaaattcaccttaaagatgaataagtggagtgtctgaagttcgaacccaa-cccctgcacatattgtacattatccttta 48619815  T
Q  119 ctaaatgagttaaactcgtggga 141  Q
    | ||||||||||||||| |||||    
T  48619814 ccaaatgagttaaactcatggga 48619792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 31793572 - 31793488
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||||| ||  || |||||||||| ||||||||||  |||||| ||||||  |||||||||||||||||||||||||||    
T  31793572 ggctagagaaatccaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgcacatattgtgcattatccct 31793488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 349 - 464
Target Start/End: Complemental strand, 22156520 - 22156406
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggt 448  Q
    |||||||| || |||||||||||||||  || ||||||||||  ||||||||||||||||  ||||||||||||||| || | ||||||| ||||||| |    
T  22156520 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatat-agaaaaaaatgtttgtt 22156422  T
Q  449 tacctttataatattc 464  Q
    || |  ||||||||||    
T  22156421 taacagtataatattc 22156406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 349 - 464
Target Start/End: Complemental strand, 22212435 - 22212321
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggt 448  Q
    |||||||| || |||||||||||||||  || ||||||||||  ||||||||||||||||  ||||||||||||||| || | ||||||| ||||||| |    
T  22212435 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatat-agaaaaaaatgtttgtt 22212337  T
Q  449 tacctttataatattc 464  Q
    || |  ||||||||||    
T  22212336 taacagtataatattc 22212321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 40385960 - 40385853
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttat 457  Q
    |||| |||||||||||||| ||  |||||||||  |||||||||||||||   ||||||||| ||||| |||||| ||||| || |||||||| | ||||    
T  40385960 aagtgtatcaaatttattcttagtaataacattttttggaatataaagatgagaattttattttaaggtatttaaaaaaaagatatttggttaacattat 40385861  T
Q  458 aatattcc 465  Q
    ||||||||    
T  40385860 aatattcc 40385853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 46266786 - 46266664
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| || |||| |||||||  ||||||||||||| ||||| |||  | ||||| ||||||  |||| ||||| ||||||||||||||||     
T  46266786 tcaagtagtctagtggttagataaattcacctttaagatgaataagtgggatgttcaaggttcgaaccccgtcccccgcacaaattgtgcattatccctt 46266687  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||||||| ||| ||||    
T  46266686 accaaatgagttaagctcatggg 46266664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 42841758 - 42841843
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatatt 103  Q
    |||||||||| || | |||||||||||||  ||||||||||||| ||||||||||| |||||| |||||| | || ||||||||||    
T  42841758 tcaagtagttcagtgtctagagaaattcacctttaagatgaataagtggggtgtctggggttcgaaccccggtccttgcacatatt 42841843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 43440802 - 43440709
Alignment:
Q  23 tagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||| ||| |||||||||||||||  || |||||||||| ||||||||||| |  ||| ||||||  || ||||||||||||||||||||||||    
T  43440802 tagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtctggaattcgaaccccgacctctgcacatattgtgcattatccct 43440709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 23824583 - 23824690
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| || |||||||  |||||| |||| | |||| ||||||||||||||||||||||| || ||||||| |||    
T  23824583 ggctagagaaattcaccttaaagatgaataagtagggtgtcc-gggttcgaacctcggcccatgcacatattgtgcattatcccttaccaaatgagctaa 23824681  T
Q  132 actcgtggg 140  Q
     ||| ||||    
T  23824682 gctcatggg 23824690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 42554747 - 42554643
Alignment:
Q  23 tagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaa 122  Q
    |||| ||| |||||| ||||||||   | |||||||||| || |||| ||  |||||| ||||||| ||||||||||||||||||||||||||| || ||    
T  42554747 tagtctagtggctagggaaattcaccataaagatgaataagtcgggtatccggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaa 42554648  T
Q  123 atgag 127  Q
    |||||    
T  42554647 atgag 42554643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 1575764 - 1575690
Alignment:
Q  66 gggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||||| |||||| ||||||| |||||| |||||||||| ||||||||| || ||||||||||| ||| ||||    
T  1575764 gggtgtctggggttcgaaccccaacccctgtacatattgtgtattatcccttaccaaatgagttaagctcatggg 1575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 5543474 - 5543357
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||  ||| || ||||||||   |||||||||| |||| |||||  ||||| |||||||    
T  5543474 gtgtttgttttaagtttaccaaatttatttctaagaatatcattatttgaaacataaagatgagaattttattc-aaggtatttagaaaaaagatgtttg 5543376  T
Q  447 gttacctttataatattcc 465  Q
     ||| | ||||||| ||||    
T  5543375 cttaacattataatgttcc 5543357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 14707410 - 14707289
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| || |||||||||||||||| | | ||| |||||| ||||||||||  |||||| ||||||| |||||||| |||   ||||||||||||     
T  14707410 tcaagtagtctaacggctagagaaattcactataaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatata-aatgcattatccctt 14707312  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  14707311 accaaatgagctaagctcatggg 14707289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 420
Target Start/End: Original strand, 45722897 - 45722959
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattc 420  Q
    ||||||| ||||||||||  || ||||||||||||||| ||||||||||| ||||||||||||    
T  45722897 aagtttaccaaatttatttttaggaataacattccttgaaatataaagatggaaattttattc 45722959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 6656815 - 6656698
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataa-cattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgttt 445  Q
    |||||| ||| |||||||  |||||||||| || |||||| |||||||||||||| ||| ||   |||||||||| |||| ||||   ||||||||||||    
T  6656815 gtgtttctttcaagtttactaaatttattcttaggaataaacattccttggaatagaaatatgagaattttattccaaggtatttggaaaaaatatgttt 6656716  T
Q  446 ggttacctttataatatt 463  Q
     |||| ||||||||||||    
T  6656715 tgttaactttataatatt 6656698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 36528198 - 36528318
Alignment:
Q  20 aagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaac 119  Q
    ||||||| ||| ||||| | |||||||  || || ||||||||||||| ||||  |||||| ||| ||  |||||  |||||||||||||||||||| ||    
T  36528198 aagtagtctagtggctaaataaattcaccttaaaaatgaataggtgggatgtccggggttcgaactccgacccctatacatattgtgcattatcccttac 36528297  T
Q  120 taaatgagttaaactcgtggg 140  Q
     ||||||||||| ||| ||||    
T  36528298 caaatgagttaagctcatggg 36528318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 5228188 - 5228109
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||  |||||||||||||||||||  || ||| |||||| |||||||||| ||| ||| |||||| |||||||||    
T  5228188 tcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccaggattcgaaccccggcccctgca 5228109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 394
Target Start/End: Complemental strand, 16916229 - 16916182
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattcctt 394  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  16916229 gtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 16916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 3889794 - 3889876
Alignment:
Q  35 tagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccag-cccctgcacatattgtgcattatccct 116  Q
    ||||||||||||  ||||||||||||| ||||||||||  |||||| |||||  | |||||||| ||||||| ||||||||||    
T  3889794 tagagaaattcacctttaagatgaataagtggggtgtccggggttcgaaccctggccccctgcatatattgtacattatccct 3889876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 10091448 - 10091513
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    |||||||||||||||  || ||| |||||| || ||||||||||||||| |||||| |||||||||    
T  10091448 ggctagagaaattcaccttaaaggtgaataagttgggtgtctagggttcgaaccccggcccctgca 10091513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 26606097 - 26606162
Alignment:
Q  29 agcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccct 94  Q
    ||||||||||||||||||  || ||| |||||| |||| ||||| |||||||||||||| ||||||    
T  26606097 agcggctagagaaattcaccttaaaggtgaataagtggagtgtccagggttcaaaccccggcccct 26606162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 15025275 - 15025152
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||  |||||| ||||||||||||  || ||| |||||| |||||||||   |||||  |||||| ||||||| | | | | ||||||||||||    
T  15025275 atcaagtagcctagcgggtagagaaattcaccttaaaggtgaataagtggggtgttcggggtttgaaccccggcccctgtataaaatatgcattatccct 15025176  T
Q  117 aactaaatgagttaaactcgtggg 140  Q
     || ||||||||||| ||| ||||    
T  15025175 taccaaatgagttaagctcatggg 15025152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 28914854 - 28914953
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccag-cccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| |||||||||||||||  |||||  |||||| ||||||||||  |||||| |||||| | |||||||| ||| | ||||||||||||    
T  28914854 tcaagtagcctagtggctagagaaattcacctttaaagtgaataagtggggtgtccggggttcgaaccccggccccctgcatataatatgcattatccct 28914953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 31475837 - 31475896
Alignment:
Q  38 agaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||| ||||||  |||||| ||||||||||  |||||| ||||||||||||||||    
T  31475837 agaaattcacttttaaagtgaataagtggggtgtcaggggttcgaaccccagcccctgca 31475896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 469
Target Start/End: Original strand, 45440650 - 45440757
Alignment:
Q  359 agtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttata 458  Q
    |||||| ||||||||||| ||  ||||||||| ||| ||||||  ||||  ||||||||||| |||  |||||| ||||| ||||||| ||| | |||||    
T  45440650 agtttaccaaatttattcatagtaataacatttcttagaatat--agatgtaaattttattccaagatatttaa-aaaaagatgtttgattaacattata 45440746  T
Q  459 atattccaagt 469  Q
    |||||||||||    
T  45440747 atattccaagt 45440757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 33248799 - 33248901
Alignment:
Q  38 agaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgt 137  Q
    |||||||||  || |||||||||| || |||||||  |||||| ||||||  || ||||| ||||||||||| |||||| || ||||||| ||| ||| |    
T  33248799 agaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacctctgcatatattgtgcatcatcccttaccaaatgagctaagctcat 33248898  T
Q  138 ggg 140  Q
    |||    
T  33248899 ggg 33248901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 44986681 - 44986603
Alignment:
Q  49 tttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    ||||||||| ||| ||||||||| | |||||| || ||| ||| ||||||  |||||||||||||||| || |||||||    
T  44986681 tttaagatggataagtggggtgtttggggttcgaatcccggccactgcactaattgtgcattatcccttaccaaatgag 44986603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 3902323 - 3902372
Alignment:
Q  91 ccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    ||||||||||||| |||||||||||| || ||||||| ||| ||||||||    
T  3902323 ccctgcacatattttgcattatcccttaccaaatgagctaagctcgtggg 3902372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 20601056 - 20601113
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaa 404  Q
    ||||||||||||||||||| ||| ||||| |||||||||  |||| | ||||||||||    
T  20601056 gtgtttgttttaagtttattaaacttatttctaagaatattattcttgggaatataaa 20601113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 42338269 - 42338346
Alignment:
Q  63 gtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    ||||||||||  || ||| ||||||  ||||||||||||||||||||||| ||| || ||||||| ||| ||| ||||    
T  42338269 gtggggtgtccgggattcgaaccccgtcccctgcacatattgtgcattattccttaccaaatgagctaagctcatggg 42338346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 11000486 - 11000541
Alignment:
Q  409 gaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||||||||| |||  ||||||||||| |||||| ||||| ||||||||||||||    
T  11000486 gaaattttattccaagatatttaagaaaa-tatgttaggttaactttataatattcc 11000541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 24315387 - 24315439
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    |||||| ||||||  ||||| ||||||||||||||||||| | ||||||||||    
T  24315387 gggttcgaaccccgacccctacacatattgtgcattatccattactaaatgag 24315439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 463
Target Start/End: Complemental strand, 43569967 - 43569912
Alignment:
Q  410 aaattttattctaaggaatttaagaaaa--atatgtttggttacctttataatatt 463  Q
    |||||||||||||||| |||||| ||||  ||||||||| ||| ||||||||||||    
T  43569967 aaattttattctaaggtatttaacaaaaatatatgtttgattaactttataatatt 43569912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 3e-46; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 6231845 - 6231727
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  6231845 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagataggaattttattccaaggaatttaagaaaaatatgtttg 6231746  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  6231745 gttagctttataatattcc 6231727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 46359679 - 46359797
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  46359679 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatgtttg 46359778  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  46359779 gttagctttataatattcc 46359797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 8476652 - 8476534
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  8476652 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatggaaattttattccaaggaatttaggaaaaatatgtttg 8476553  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  8476552 gttagctttataatattcc 8476534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 47115201 - 47115083
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  47115201 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 47115102  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  47115101 gttagctttataatattcc 47115083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 11239464 - 11239346
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  11239464 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 11239365  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  11239364 gttagctttataatattcc 11239346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 26848749 - 26848867
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  26848749 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 26848848  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  26848849 gttaactttataatattcc 26848867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 33218257 - 33218139
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  33218257 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 33218158  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  33218157 gttaactttataatattcc 33218139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 44952035 - 44952153
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  44952035 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 44952134  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  44952135 gttaactttataatattcc 44952153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 20414809 - 20414691
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| || ||||||| ||||||||||||||    
T  20414809 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaagaatttaggaaaaatatgtttg 20414710  T
Q  447 gttacctttataatattcc 465  Q
     ||| ||||||||||||||    
T  20414709 attagctttataatattcc 20414691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 31611329 - 31611211
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||| | |||||||||| ||||||||||  |||||||||||||    
T  31611329 gtgtttgtttcaagtttaccaaatttattcttatgaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgtttg 31611230  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  31611229 gttagctttataatattcc 31611211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 48340101 - 48339983
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||| ||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  48340101 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 48340002  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  48340001 gttagctttataatattcc 48339983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 1098926 - 1099042
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  1098926 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 1099025  T
Q  447 gttacctttataatatt 463  Q
    | || ||||||||||||    
T  1099026 gctagctttataatatt 1099042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 9320793 - 9320674
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttatt-ctaaggaatttaagaaaaatatgttt 445  Q
    |||||||||| |||||||| |||||||||| || |||||||||||||||||||||||||||   ||||||||| |||||||||||| |||||||||||||    
T  9320793 gtgtttgtttcaagtttatgaaatttattcataggaataacattccttggaatataaagatgagaattttattcctaaggaatttaggaaaaatatgttt 9320694  T
Q  446 ggttacctttataatattcc 465  Q
    ||||| ||||||||||||||    
T  9320693 ggttagctttataatattcc 9320674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 347 - 458
Target Start/End: Original strand, 40907993 - 40908104
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  40907993 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 40908092  T
Q  447 gttacctttata 458  Q
    |||| |||||||    
T  40908093 gttagctttata 40908104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 20297520 - 20297638
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||| | |||||||||  |||||||||| ||||||||||||||    
T  20297520 gtgtttgttttaagtttaccaaatttattcttaggaataacattctttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttg 20297619  T
Q  447 gttacctttataatattcc 465  Q
    |||  ||||||||||||||    
T  20297620 gttgactttataatattcc 20297638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 24574294 - 24574412
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||| |||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  24574294 gtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgagaattttattccaaggaatttatgaaaaatatgtttg 24574393  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  24574394 gttagctttataatattcc 24574412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 24783936 - 24784058
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||| |||||| |||||||||||||    
T  24783936 gtgtttgtttcaagtttaccaaatttattcataagaataacattccttggaatataaagatgagaattttattctaaggtatttaaaaaaaatatgtttg 24784035  T
Q  447 gtt-acctttataatattccaag 468  Q
    ||| | ||||| |||||||||||    
T  24784036 gttaaactttagaatattccaag 24784058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 43719269 - 43719152
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||| |   |||||||||| |||||||||| ||||||||||||||    
T  43719269 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagttgagaattttattccaaggaatttaggaaaaatatgtttg 43719170  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  43719169 gttagctttataatattc 43719152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 43132500 - 43132382
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||  |||||||||| || |||||||||||||||||||||||||||   |||||||||| |||| ||||| ||||||||||||||    
T  43132500 gtgtttgtttcaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtatttaggaaaaatatgtttg 43132401  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  43132400 gttaactttataatattcc 43132382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 53166068 - 53165950
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||| |  ||||||||| |||| ||||| ||||||||||||||    
T  53166068 gtgtttgtttcaagtttatccaatttatttctaagaataacattccttgaaatataaagatgggtattttattccaaggtatttaggaaaaatatgtttg 53165969  T
Q  447 gttacctttataatattcc 465  Q
    |||| | ||||||||||||    
T  53165968 gttaaccttataatattcc 53165950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 40584338 - 40584459
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||  ||||||||||||| |||||||||  |||| |||||| ||||| |||||||    
T  40584338 gtgtttgtttcaagtgtaacaaatttattcctaagaataacattccttcaaatataaagataggaattttatttcaaggtatttaaaaaaaagatgtttg 40584437  T
Q  447 gttacctttataatattccaag 468  Q
    |||| | |||||||||||||||    
T  40584438 gttaacattataatattccaag 40584459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 10823061 - 10822944
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||  |||||||||||   |||||||||| |||| ||||| ||||||||||||||    
T  10823061 gtgtttgtttcaagtttagcaaatttatttctaggaataacattccttacaatataaagatgagaattttattccaaggtatttaggaaaaatatgtttg 10822962  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  10822961 gttaactttataatattc 10822944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 26849489 - 26849372
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| ||||||||||  || |||||| ||| |||||||||||||||| |||||||||||  |||| |||||  |||||||||||||    
T  26849489 gtgtttgttttaagtttaccaaatttatttttaggaataatatttcttggaatataaagatggaaattttatttcaaggtatttagaaaaaatatgtttg 26849390  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  26849389 gttaactttataatattc 26849372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 465
Target Start/End: Complemental strand, 28124779 - 28124662
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| ||||||| ||||||||||  || || ||||||||||||||||||||| ||   |||||||||| |||||||||| |||||||||||||||    
T  28124779 tgtttgtttcaagtttaccaaatttatttttaggattaacattccttggaatataaatatgagaattttattccaaggaatttaggaaaaatatgtttgg 28124680  T
Q  448 ttacctttataatattcc 465  Q
    ||| ||||||||||||||    
T  28124679 ttagctttataatattcc 28124662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 29512327 - 29512444
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || |||| |||||||||||||| |||||||||||||| |||||||||||| | |||||||||  ||| |||||| |||||||| |||||    
T  29512327 gtgtttgtttcaaatttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttatttcaagaaatttaggaaaaatacgtttg 29512426  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  29512427 gttagctttataatattc 29512444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 347 - 467
Target Start/End: Complemental strand, 6832266 - 6832146
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||   |||||||||| |||| |||||  |||||||||||||    
T  6832266 gtgtttgtttcaaatttaccaaatttattcctaagaataacattacttggaatataaagatgagaattttattccaaggtatttagaaaaaatatgtttg 6832167  T
Q  447 gttacctttataatattccaa 467  Q
    |||| ||| ||| ||||||||    
T  6832166 gttaacttcatagtattccaa 6832146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 33528182 - 33528304
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||||||||||     
T  33528182 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatccctt 33528281  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  33528282 accaaatgagctaagctcatggg 33528304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 347 - 431
Target Start/End: Original strand, 6927818 - 6927902
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattta 431  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||   ||||||||||||||| |||||    
T  6927818 gtgtttgttttaagtttatcaaatttattactaggaataacattccttggaatataaagatgagaattttattctaaggtattta 6927902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 47864754 - 47864645
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||  |||||| ||||||| |||||||||||||||||||||||||||     
T  47864754 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgcacatattgtgcattatccctt 47864655  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  47864654 accaaatgag 47864645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 49216027 - 49216147
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||  |||| |||||| || ||||||  ||||||||||||||||||| | |||||||||| |||| |||||  |||||||||||||    
T  49216027 gtgtttgttttaagttttccaaaattattcttaggaataatgttccttggaatataaagatgggaattttattccaaggtatttagaaaaaatatgtttg 49216126  T
Q  447 gttacctttataatattccaa 467  Q
    |||| | |||||| |||||||    
T  49216127 gttaaccttataaaattccaa 49216147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 39739392 - 39739269
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| |||||||||||||||  || |||||||||| ||| ||||||  |||||| |||||||  ||||||||||||||||||||||||||     
T  39739392 tcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaaccccaatccctgcacatattgtgcattatccctt 39739293  T
Q  118 actaaatgagttaaactcgtggga 141  Q
    || ||||||| ||| ||| |||||    
T  39739292 accaaatgagctaagctcatggga 39739269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 985896 - 986009
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||| | ||| |||||||||||||||  ||||||||||||| ||||||||||  || |||| ||||||||||||||||| |||||||||||| |||     
T  985896 tcaagtaatctagtggctagagaaattcacctttaagatgaataagtggggtgtccgggattcagaccccagcccctgcacaaattgtgcattatgcctt 985995  T
Q  118 actaaatgagttaa 131  Q
    || |||| ||||||    
T  985996 accaaataagttaa 986009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 12228598 - 12228481
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||  ||||||||||||||||||| |  ||||||||||  ||| |||||||||||   ||||||||||||||| |||||| |||||||||||||    
T  12228598 gtgtttgttacaagtttatcaaatttattcttgggaataacattatttgaaatataaagatgagaattttattctaaggtatttaaaaaaaatatgtttg 12228499  T
Q  447 gttacctttataatattc 464  Q
    ||||  ||||| ||||||    
T  12228498 gttagttttatgatattc 12228481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 31436266 - 31436150
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||   |||||||||| || |||||||||||||| |||||||||| |||| || ||  ||||| |||||||    
T  31436266 gtgtttgtttcaagtttaccaaatttattcctggaaataacattctttagaatataaagataggaattttattccaaggtatatagaaaaaacatgtttg 31436167  T
Q  447 gttacctttataatatt 463  Q
    ||||  |||||||||||    
T  31436166 gttagttttataatatt 31436150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 46798666 - 46798578
Alignment:
Q  52 aagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||||||| |||||||||| ||||||| || ||| |||||||||||||||||||||||||||| || ||||||||||| ||| ||||    
T  46798666 aagatgaataagtggggtgtccagggttcgaatcccggcccctgcacatattgtgcattatccctcaccaaatgagttaagctcatggg 46798578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 27471622 - 27471512
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| ||||||||||||| |  || |||||||||| ||||||||||  |||||| ||||||| |||||| ||||||| ||||||||||||     
T  27471622 tcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgtacatattatgcattatccctt 27471523  T
Q  118 actaaatgagt 128  Q
    || ||||||||    
T  27471522 accaaatgagt 27471512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 31419681 - 31419588
Alignment:
Q  38 agaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    ||||||||| ||||||| |||||| ||||||||| | |||||| ||||||||||||| |||||||||||| || ||||| || |||||||||||    
T  31419681 agaaattcacttttaaggtgaataagtggggtgtttggggttcgaaccccagcccctacacatattgtgcgttgtcccttaccaaatgagttaa 31419588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 430
Target Start/End: Original strand, 32070999 - 32071080
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattt 430  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||   |||||||||| |||| ||||    
T  32070999 gtttgttttaaatttatcaaatttattcctatgaataacatttcttggaatataaagatgagaattttattccaaggtattt 32071080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 50381818 - 50381710
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| ||||||||||  || ||| ||||||  |||||||| |||||||||||||||||| || |||||||||||    
T  50381818 ggctagagaaattcaccttaaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatatattgtgcattatcccttaccaaatgagttaa 50381719  T
Q  132 actcgtggg 140  Q
     ||| ||||    
T  50381718 gctcatggg 50381710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 11483731 - 11483609
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| |||  ||||||||||||||  || |||||||||| ||||||||||  | |||| |||||  ||||||||||||||| ||||||||||||     
T  11483731 tcaagtagtctagttgctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaaccctggcccctgcacatattttgcattatccctt 11483632  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  11483631 accaaatgagctaagctcatggg 11483609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 31435478 - 31435576
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||| ||| |||||||||||||||  || |||||||||| ||||| ||||   ||||| ||||||| ||||| |||||||||||||||||||||    
T  31435478 tcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccaacccctacacatattgtgcattatccct 31435576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 9320936 - 9321053
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| || ||||||||||||| ||||||||||||| |||||||||   || ||| ||||||| |||||||||| ||||| ||||||||||     
T  9320936 tcaagtagcctagtggttagagaaattcatctttaagatgaataagtggggtgttcgggtttcgaaccccaacccctgcacaaattgtacattatccctt 9321035  T
Q  118 actaaatgagttaaactc 135  Q
    |  ||||||| |||||||    
T  9321036 atcaaatgagctaaactc 9321053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 29645804 - 29645889
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatatt 103  Q
    ||||||||| ||| |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| |||||||||||||||    
T  29645804 tcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatatt 29645889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 46247333 - 46247256
Alignment:
Q  63 gtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||||||||| || ||||||| ||| ||| ||||    
T  46247333 gtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatcccttaccaaatgagctaagctcatggg 46247256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 465
Target Start/End: Complemental strand, 38140710 - 38140594
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggt 448  Q
    |||||||| || ||||| ||||||||| ||| ||||||||||||||||||||||||| |   |||||||||| |||| || ||  ||||| ||||||| |    
T  38140710 gtttgtttcaattttataaaatttatttctaggaataacattccttggaatataaaggtgtgaattttattccaaggtatatagaaaaaagatgtttgat 38140611  T
Q  449 tacctttataatattcc 465  Q
    || | ||||||||||||    
T  38140610 taacattataatattcc 38140594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 16141361 - 16141428
Alignment:
Q  49 tttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||||||| ||||||||||| | |||| ||||||||||| || ||||||||||||||||||||    
T  16141361 tttaagatgaataagtggggtgtctggagttcgaaccccagcccttgtacatattgtgcattatccct 16141428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 349 - 464
Target Start/End: Original strand, 18460582 - 18460697
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggt 448  Q
    |||||||| |||||||||||||||||| ||| ||||||||||  | | |||||||||||   ||||| |||  |||| |||||| | |||||| ||||||    
T  18460582 gtttgtttcaagtttatcaaatttatttctacgaataacatttttcgaaatataaagatgagaatttgattacaaggtatttaaaagaaatatatttggt 18460681  T
Q  449 tacctttataatattc 464  Q
    || |||||||||||||    
T  18460682 taactttataatattc 18460697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 27394625 - 27394546
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||  |||||||||||||||||||  || ||| |||||| ||||||||||  |||||||||||||||||||||||    
T  27394625 tcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccagcccctgca 27394546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 44062019 - 44062113
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatc 113  Q
    ||||||||| ||| ||||||||| |||||  || |||||||||| ||||||||||  |||||| ||| || |||||||||||||||||||||||||    
T  44062019 tcaagtagtctagtggctagagacattcaccttaaagatgaataagtggggtgtcg-gggttcgaactccggcccctgcacatattgtgcattatc 44062113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 166906 - 166808
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||||||||| ||||||||| ||| ||| |||||| ||| ||||||| |||||| |||||| ||||||||| | ||| ||||||||||||    
T  166906 tcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtgaggtgtctggggttcgaaccccggcccctgcataaattatgcattatccct 166808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 33830345 - 33830455
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||||||  || ||||||||||||  || || ||||||| ||||||||||| | ||||||||   |||||||||| ||||||||||||||| ||     
T  33830345 tcaagtagtttattggttagagaaattcaccttaaaaatgaataagtggggtgtctggagttcaaactagagcccctgcatatattgtgcattatctctt 33830444  T
Q  118 actaaatgagt 128  Q
    || ||||||||    
T  33830445 accaaatgagt 33830455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 468
Target Start/End: Complemental strand, 12931284 - 12931163
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||| || ||||||||||||||| | |||||||| ||  || ||||||||| |||  ||||||||||| |||||| ||||| |||||||    
T  12931284 gtgtttgtttcaagtgtaccaaatttattcctaaaagtaacattctttataacataaagataaaaaaattattctaaggtatttaaaaaaaagatgtttg 12931185  T
Q  447 gttacctttataatattccaag 468  Q
     |||   |||||||||| ||||    
T  12931184 attaaaattataatatttcaag 12931163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 27817045 - 27817153
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || ||||||||||  |||||||||  |||||| ||| || ||||||||||| ||||||||||||||||     
T  27817045 tcaagtagcctagtggctagagaaattcaacttaaagatgaataaatggggtgtcc-gggttcgaactccggcccctgcacaaattgtgcattatccctt 27817143  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  27817144 accaaatgag 27817153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 28770553 - 28770437
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaat-atgttt 445  Q
    |||||||||| || |||| |||||||||||||| |||||||||||||||||| |||| |||   |||||||||| |||| || | |||||||| ||||||    
T  28770553 gtgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaacataatgatgagaattttattccaaggtatat-agaaaaatgatgttt 28770455  T
Q  446 ggttacctttataatatt 463  Q
    | ||| | ||||||||||    
T  28770454 gtttaacgttataatatt 28770437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 29226427 - 29226322
Alignment:
Q  35 tagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaact 134  Q
    ||||||||||||  || |||||||||| |||||||||   |||||| |||||| ||||||||||||||||||  |||||||| || ||||||| ||| ||    
T  29226427 tagagaaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccggcccctgcacatattgtgtgttatcccttaccaaatgagctaagct 29226328  T
Q  135 cgtggg 140  Q
    | ||||    
T  29226327 catggg 29226322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 38668246 - 38668137
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| |||||||||||||||  || |||||||||| ||||||||||  || ||  ||| ||| ||||| ||| |||||||||||||||||     
T  38668246 tcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtcagggatttcaactccaacccctacacgtattgtgcattatccctt 38668147  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  38668146 accaaatgag 38668137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 48717532 - 48717415
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||||||||||||| ||||||||||  || |||||||| | ||||||||| | |||||| ||||||  |||||||| | ||  || ||||| |||    
T  48717532 atcaagtagtttagcggctggagaaattcaccttaaagatgaaaaagtggggtgtttggggttcgaacccctacccctgcatacataatgtattattcct 48717433  T
Q  117 aactaaatgagttaaact 134  Q
     || ||||||||||||||    
T  48717432 taccaaatgagttaaact 48717415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 468
Target Start/End: Original strand, 27093769 - 27093876
Alignment:
Q  360 gtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataa 459  Q
    ||||||||||||||||| ||| ||||| ||||||| ||||||||||||   |||||||||  |||| | |||||||||| ||||||| ||| |  |||||    
T  27093769 gtttatcaaatttattcttaaaaataatattccttagaatataaagatgtgaattttatttcaaggta-ttaagaaaaagatgtttgattaacaatataa 27093867  T
Q  460 tattccaag 468  Q
    |||||||||    
T  27093868 tattccaag 27093876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 464
Target Start/End: Complemental strand, 33650357 - 33650241
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| ||||||| ||||||||||  || ||||||||||  ||| ||| |||||||   ||||||||||||||| ||| || ||||| |||||||     
T  33650357 tgtttgtttcaagtttaccaaatttatttttatgaataacattatttgaaatctaaagatgagaattttattctaaggtattgaataaaaaaatgtttgc 33650258  T
Q  448 ttacctttataatattc 464  Q
    ||| | |||||||||||    
T  33650257 ttaacattataatattc 33650241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 32421466 - 32421368
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||||||| ||||||| |||||||| || |||||||||| |||||| ||    ||||| ||||||  |||||||| ||||| ||||||||||||    
T  32421466 tcaagtagtttagtggctagaaaaattcatcttaaagatgaataagtggggagttcgaggttcgaaccccgacccctgcatatattatgcattatccct 32421368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 25165525 - 25165436
Alignment:
Q  52 aagatgaataggtgggg-tgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||||||| |||||| ||||  |||||| |||||| | |||||||||||||||||||||||||| || ||||||| ||| ||| ||||    
T  25165525 aagatgaataagtgggggtgtccggggttcgaaccccggtccctgcacatattgtgcattatcccttaccaaatgagctaagctcatggg 25165436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 22602180 - 22602296
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||| | ||||| || ||| |||| |  ||||| ||||||||||||||||| |||     
T  22602180 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgcgatgtctgggattcgaacctcgtcccctacacatattgtgcattattcctt 22602279  T
Q  118 actaaatgagttaaact 134  Q
    || ||||||| ||||||    
T  22602280 accaaatgagctaaact 22602296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 37756400 - 37756488
Alignment:
Q  28 tagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||| ||||||| |||  || ||| |||||| ||||||||| | |||||| |||||||||||||||| | ||| ||||||||||||    
T  37756400 tagcggcgagagaaactcacgttaaaggtgaataagtggggtgtttggggttcgaaccccagcccctgcataaattatgcattatccct 37756488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 414 - 465
Target Start/End: Original strand, 19532939 - 19532990
Alignment:
Q  414 tttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||| |||| ||||| |||||||||||||||||| ||||||||||||||    
T  19532939 tttattccaaggtatttaggaaaaatatgtttggttaactttataatattcc 19532990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 1102673 - 1102771
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  |||||||||||||||||||  || ||| |||||| |||||||||| | ||||| ||| ||  |||||||| | ||| ||||||||||||    
T  1102673 tcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccatggttcgaactccgtcccctgcataaattatgcattatccct 1102771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 2259226 - 2259153
Alignment:
Q  67 ggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    ||||||| |||||  ||| || |||||||||||||||||||||||||||| || ||||||| ||| ||| ||||    
T  2259226 ggtgtctggggtttgaactccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcatggg 2259153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 30162718 - 30162653
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||| |||||| |||| ||||||||||||||||||||||| || ||||||| ||| ||| ||||    
T  30162718 gggttcgaaccccggcccttgcacatattgtgcattatcccttaccaaatgagctaagctcatggg 30162653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 34407093 - 34407146
Alignment:
Q  44 tcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||| |||||||||| ||||||||||| |||||| ||||||| ||||||||    
T  34407093 tcattttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgca 34407146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 55426228 - 55426110
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||    ||||||||||  |||||| |||| | |||| ||||||||||||||||||||| |     
T  55426228 tcaagtagcctagtggctagagaaattcaccttaaagatga----gtggggtgtccggggttcgaacctcggcccatgcacatattgtgcattatccttt 55426133  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  55426132 accaaatgagctaagctcatggg 55426110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 31267691 - 31267575
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    ||||||||||||||||||||  |||||||  || |||||||||| |||  |||||||||||   ||||| ||| ||||| |||||  ||||| ||||||     
T  31267691 gtgtttgttttaagtttatcggatttatttttaggaataacatttcttaaaatataaagatgtgaatttcattttaaggtatttagaaaaaagatgttta 31267592  T
Q  447 gttacctttataatatt 463  Q
    || | | ||||||||||    
T  31267591 gtcaacattataatatt 31267575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 34225243 - 34225204
Alignment:
Q  88 agcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  34225243 agcccctgcacatattgtgcattatcccttaccaaatgag 34225204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 54457271 - 54457176
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatc 113  Q
    ||||||||  |||||||||||||||||||  || ||| ||||||  |||||||||  ||||| |||||||||| ||| || | ||| |||||||||    
T  54457271 tcaagtagcctagcggctagagaaattcaccttaaaggtgaataaatggggtgtccggggtttaaaccccagctcctacataaattatgcattatc 54457176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 8930954 - 8931008
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtc 72  Q
    ||||||||  ||||||||||||||||||| ||| ||| |||||| ||||||||||    
T  8930954 tcaagtagcctagcggctagagaaattcactttaaaggtgaataagtggggtgtc 8931008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 25750347 - 25750385
Alignment:
Q  46 atttttaagatgaataggtggggtgtctagggttcaaac 84  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  25750347 atttttaagatgaataggtggggtgtccacggttcaaac 25750385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 31108766 - 31108816
Alignment:
Q  47 tttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    |||| ||| |||||| ||||||||||| |||||| ||||||||||||||||    
T  31108766 ttttcaaggtgaataagtggggtgtctcgggttcgaaccccagcccctgca 31108816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 38415001 - 38414903
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||||||| |||||||||||  || ||| |||||| |||||||||  || ||||||||||   |||||||| ||| | ||||||||||||    
T  38415001 tcaagtagcctagcggccagagaaattcaccttaaaggtgaataagtggggtgttcagagttcaaaccctgacccctgcatataatatgcattatccct 38414903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 49429578 - 49429457
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    |||| ||| ||||||||||||||||||||  || ||| |||||| ||||||||||  |||||| |||||  | ||||||| | |   ||||||||||||     
T  49429578 tcaaatagcttagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccctggtccctgcataca-aatgcattatccctt 49429480  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||||||| ||| ||||    
T  49429479 accaaatgagttaagctcatggg 49429457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 36590451 - 36590386
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||| |||| | ||||||||||||||||| |||||||||| || ||||||| ||| ||| ||||    
T  36590451 gggttcgaaccacggcccctgcacatattgtacattatcccttaccaaatgagctaatctcatggg 36590386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 50676844 - 50676961
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| || ||||||||||||  || ||| |||||| |||||||||   |||||| ||||||| ||||| || ||| | || ||| |||||     
T  50676844 tcaagtagtctagtggttagagaaattcaccttaaaggtgaataagtggggtgttcggggttcgaaccccaacccctacatataatatgtattgtccctt 50676943  T
Q  118 actaaatgagttaaactc 135  Q
    || || ||||||||||||    
T  50676944 accaagtgagttaaactc 50676961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 375
Target Start/End: Original strand, 13642826 - 13642854
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttatt 375  Q
    |||||||||||||||||||||||||||||    
T  13642826 gtgtttgttttaagtttatcaaatttatt 13642854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 431
Target Start/End: Original strand, 27822998 - 27823082
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattta 431  Q
    |||||||||| ||||||| ||||||||||  || ||||||||||| || ||| ||||| ||   ||||||||| ||||| |||||    
T  27822998 gtgtttgtttcaagtttaccaaatttatttttaggaataacattctttcgaacataaatatgagaattttattttaaggtattta 27823082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 50332934 - 50332978
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaata 61  Q
    |||||||||| |||||||||||||||||||| || ||| ||||||    
T  50332934 atcaagtagtctagcggctagagaaattcatcttaaaggtgaata 50332978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 5770454 - 5770336
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  5770454 gtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagataggaattttattccaaggaatttaagaaaaatatgtttg 5770355  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  5770354 gttagctttataatattcc 5770336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 638321 - 638439
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    ||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  638321 gtgtttgatttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaagaaaaatatgtttg 638420  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  638421 gttagctttataatattcc 638439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 14777842 - 14777724
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  14777842 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 14777743  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  14777742 gttagctttataatattcc 14777724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 346689 - 346571
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  346689 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 346590  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  346589 gttagctttataatattcc 346571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 4559286 - 4559404
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  4559286 gtgtttgtttcaagtttaccaaatttatttctaagaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 4559385  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  4559386 gttagctttataatattcc 4559404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 6171518 - 6171636
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  6171518 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 6171617  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  6171618 gttagctttataatattcc 6171636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 42675005 - 42674887
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  42675005 gtgtttgtttcaagtttaccaaatttattcctaggaataacatttcttggaatataaagataggaattttattccaaggaatttaggaaaaatatgtttg 42674906  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  42674905 gttagctttataatattcc 42674887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 344 - 465
Target Start/End: Complemental strand, 9734193 - 9734072
Alignment:
Q  344 aacgtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgt 443  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||    
T  9734193 aacgtgtttgttttaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgt 9734094  T
Q  444 ttggttacctttataatattcc 465  Q
    ||||||  ||||||||||||||    
T  9734093 ttggttggctttataatattcc 9734072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 2050593 - 2050711
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  2050593 gtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 2050692  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  2050693 gttagctttataatattcc 2050711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 17965710 - 17965828
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  17965710 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 17965809  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  17965810 gttagctttataatattcc 17965828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 23943890 - 23944008
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||||| ||| |||||||  |||||||||||||    
T  23943890 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattgtaaagaatttagaaaaaatatgtttg 23943989  T
Q  447 gttacctttataatattcc 465  Q
    |||||||||||||||||||    
T  23943990 gttacctttataatattcc 23944008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 37233157 - 37233275
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||| ||||| ||||||||||||||    
T  37233157 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaatatgtttg 37233256  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  37233257 gttaactttataatattcc 37233275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 41729474 - 41729356
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  41729474 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 41729375  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  41729374 gttagctttataatattcc 41729356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 11071332 - 11071450
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||| ||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  11071332 gtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 11071431  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  11071432 gttaactttataatattcc 11071450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 21737752 - 21737634
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||| || | |||||||||| |||||||||| ||||||||||||||    
T  21737752 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaatttatgaaaaatatgtttg 21737653  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  21737652 gttagctttataatattcc 21737634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 28312040 - 28311922
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||| | |||||||||| |||| ||||| ||||||||||||||    
T  28312040 gtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaatatgtttg 28311941  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  28311940 gttaactttataatattcc 28311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 37192249 - 37192367
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  37192249 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 37192348  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  37192349 gttagctttataatattcc 37192367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 348 - 465
Target Start/End: Complemental strand, 40951202 - 40951085
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| || |||| |||||||||||||| |||||||||||||||||||||||||||  ||||||||||| || ||||||| |||||||||||||||    
T  40951202 tgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaatataaagatgaaaattttattccaaagaatttaggaaaaatatgtttgg 40951103  T
Q  448 ttacctttataatattcc 465  Q
    ||| ||||||||||||||    
T  40951102 ttagctttataatattcc 40951085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 13760694 - 13760812
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||  |||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| ||||||||||  |||||||||||||    
T  13760694 gtgtttgtttcaagtttgccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgtttg 13760793  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  13760794 gttagctttataatattcc 13760812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 20426826 - 20426708
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||  || | |||||  |||||||||||||    
T  20426826 gtgtttgtttaaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatttcaatgtatttagaaaaaatatgtttg 20426727  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  20426726 gttaactttataatattcc 20426708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 26309994 - 26310111
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||||| | |||||||||  ||| |||||| |||||||||| |||    
T  26309994 gtgtttgtttcaagtttaccaaatttattcctaggaatagcattccttggaatataaagatgggaattttattacaagaaatttaggaaaaatatggttg 26310093  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  26310094 gttagctttataatattc 26310111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 381 - 465
Target Start/End: Original strand, 2521436 - 2521520
Alignment:
Q  381 gaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  2521436 gaataacattccttggaatataaagatggaaattttattccaaggaatttaggaaaaatatgtttggttagctttataatattcc 2521520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 367 - 465
Target Start/End: Original strand, 41750276 - 41750374
Alignment:
Q  367 aaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||||| ||||||||||||||| ||||||||||| | |||||||||  |||||||||| |||||||||||||||||| ||||||||||||||    
T  41750276 aaatttattcctaggaataacattccttgaaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttaactttataatattcc 41750374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 39819417 - 39819538
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || |||| ||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||  ||| |||||  |||||||||||||    
T  39819417 gtgtttgtttcaaatttaccaaatttattcataggaataacattctttggaatataaagatggaaattttattcccaggtatttagaaaaaatatgtttg 39819516  T
Q  447 gttacctttataatattccaag 468  Q
    |||  |||||||||||||||||    
T  39819517 gttgactttataatattccaag 39819538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 365 - 465
Target Start/End: Complemental strand, 34357024 - 34356925
Alignment:
Q  365 tcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattc 464  Q
    |||||||||||| || ||||| ||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  34357024 tcaaatttattcttaggaatagcattccttggaatataa-gataggaattttattccaagaaatttaagaaaaatatgtttggttagctttataatattc 34356926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 347 - 458
Target Start/End: Original strand, 37533680 - 37533791
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||  ||||||||| ||| |||||||||||||||||||| |||||| | |||||||||| |||||||||| ||||| ||||||||    
T  37533680 gtgtttgtttcaagtttactaaatttatttctaggaataacattccttggaataaaaagatgggaattttattccaaggaatttaggaaaattatgtttg 37533779  T
Q  447 gttacctttata 458  Q
    |||| |||||||    
T  37533780 gttagctttata 37533791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 3254436 - 3254318
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| ||||||||||  || ||||||||||| |||||||||||| ||   ||||||||||||||| |||||  |||||||||||||    
T  3254436 gtgtttgttttaagtttaccaaatttatttttaggaataacattctttggaatataaaaatgagaattttattctaaggtatttagaaaaaatatgtttg 3254337  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||| ||||||||||    
T  3254336 gttaacttcataatattcc 3254318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 7007312 - 7007430
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| ||||||||||  || |||||||||| |||| |||||||||||   ||||||||||||| | |||||  |||||||||||||    
T  7007312 gtgtttgttttaagtttaccaaatttattattaggaataacatttcttgaaatataaagatgagaattttattctaaagtatttagaaaaaatatgtttg 7007411  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  7007412 gttaactttataatattcc 7007430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 3902184 - 3902301
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| || |||||||  || ||||||||||||||| ||||||||||| | |||||||||| |||  |||||  |||||||||||||    
T  3902184 gtgtttgtttcaagtttaccatatttatttttaggaataacattccttgaaatataaagatgggaattttattccaagatatttagaaaaaatatgtttg 3902283  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  3902284 gttaactttataatattc 3902301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 468
Target Start/End: Original strand, 13790018 - 13790139
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattt-aagaaaaatatgtttg 446  Q
    ||||||||| ||||||||||||||||||  || ||||||||||||||| |||||| ||||  |||||||||||||||| |||| || ||||| |||||||    
T  13790018 tgtttgtttcaagtttatcaaatttatttgtaggaataacattccttgaaatatatagatgtaaattttattctaaggtatttaaaaaaaaagatgtttg 13790117  T
Q  447 gttacctttataatattccaag 468  Q
     ||| | |||||||||||||||    
T  13790118 attaacattataatattccaag 13790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 40569745 - 40569866
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||| | ||  ||||||||||| |||| |||||  ||||| |||||||    
T  40569745 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatatatatatgtaaattttattccaaggtatttagaaaaaagatgtttg 40569844  T
Q  447 gttacctttataatattccaag 468  Q
    |||| | ||||||| |||||||    
T  40569845 gttaacattataatgttccaag 40569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 45408981 - 45409094
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    ||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||   |||||||||| |||| |||||  ||||||||||||| ||    
T  45408981 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttattccaaggtatttagcaaaaatatgtttgatt 45409080  T
Q  450 acctttataatatt 463  Q
    |  |||||||||||    
T  45409081 aaatttataatatt 45409094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 350 - 465
Target Start/End: Complemental strand, 27358303 - 27358188
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    ||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||   |||||||||  |||| |||||  ||||||||||||| ||    
T  27358303 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttatttcaaggtatttagcaaaaatatgtttgatt 27358204  T
Q  450 acctttataatattcc 465  Q
    |  |||||||||||||    
T  27358203 aaatttataatattcc 27358188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 14832538 - 14832656
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| | ||||||||||||||||  |||||||||||   ||||||||||  ||  |||||  |||||||||||||    
T  14832538 gtgtttgtttcaagtttaccaaatttatttccaagaataacattccttaaaatataaagatgataattttattcctagatatttagaaaaaatatgtttg 14832637  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  14832638 gttagctttataatattcc 14832656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 39995435 - 39995365
Alignment:
Q  395 ggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  39995435 ggaatataaagatggaaattttattccaaggaatttatgaaaaatatgtttggttaactttataatattcc 39995365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 45693916 - 45694034
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || |||||||||||||||||| ||||||||   |||||||||| |||| |||| | ||||| |||||||    
T  45693916 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaacataaagatgagaattttattccaaggcattttaaaaaaaaatgtttg 45694015  T
Q  447 gttacctttataatattcc 465  Q
     ||| | ||||||||||||    
T  45694016 cttaacattataatattcc 45694034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 11763733 - 11763626
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttat 457  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||   |||||||||| |||| || ||  ||||||||||||| |||  |||||    
T  11763733 aagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtatctagaaaaaatatgtttgattaattttat 11763634  T
Q  458 aatattcc 465  Q
    ||||||||    
T  11763633 aatattcc 11763626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 18714000 - 18713882
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    ||||||| || ||| ||| ||||||||||  || |||||||||||||||||||||||||||   ||| |||||| |||  |||||  |||||||||||||    
T  18714000 gtgtttgattcaagcttaccaaatttatttataggaataacattccttggaatataaagatgagaatattattccaagatatttagaaaaaatatgtttg 18713901  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  18713900 gttaactttataatattcc 18713882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 3330178 - 3330291
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    |||| ||| |||| || ||||||||||||  || |||||||||| ||||||||||  |||||| ||| ||  || ||||||||||||||||||||||||     
T  3330178 tcaaatagcttagtggttagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccgacctctgcacatattgtgcattatccctt 3330277  T
Q  118 actaaatgagttaa 131  Q
    ||||||||||||||    
T  3330278 actaaatgagttaa 3330291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 464
Target Start/End: Complemental strand, 14403548 - 14403431
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaa--gatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||||||||||||  ||  ||||||| | |||| ||||||||  ||| |||||||||| ||||||  ||||  |||||||| ||||    
T  14403548 gtttgttttaagtttatcaaatttatttttagaaataacagttcttgaaatataaaaagatggaaattttatactaaggtttttagaaaaaatatttttg 14403449  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  14403448 gttaactttataatattc 14403431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 19843355 - 19843453
Alignment:
Q  33 gctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    ||||||||||||||  || |||||||||| ||| |||||||||||||| |||||   |||||||||||||||| ||| |||||| || |||||||||||    
T  19843355 gctagagaaattcaccttaaagatgaataagtgaggtgtctagggttcgaaccctgacccctgcacatattgtacatcatcccttacgaaatgagttaa 19843453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 468
Target Start/End: Complemental strand, 41298255 - 41298140
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggtt 449  Q
    |||||||||||| |||||||||||||  || ||||||||||| |||||||||||||||   ||||||||| |   | |||||| ||||| ||||||| ||    
T  41298255 tttgttttaagtatatcaaatttatttttaggaataacattcattggaatataaagatgagaattttatttt---gtatttaaaaaaaagatgtttgttt 41298159  T
Q  450 acctttataatattccaag 468  Q
    | | |||||||||||||||    
T  41298158 aacattataatattccaag 41298140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 11069328 - 11069431
Alignment:
Q  20 aagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaac 119  Q
    ||||| ||||| |||||||||||||||| || ||||||| ||||    ||||| ||||||| |||||||  |||||||||||||||||||||| ||| ||    
T  11069328 aagtaatttagtggctagagaaattcatcttaaagatgagtagg----gtgtccagggttcgaaccccaaaccctgcacatattgtgcattattccttac 11069423  T
Q  120 taaatgag 127  Q
     |||||||    
T  11069424 caaatgag 11069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 25553123 - 25553244
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||| ||||| || ||||||||||||| || |||||||||| |||| || ||| | |||| |||||||  | ||||||||||||||||||||||||     
T  25553123 tcaagtaatttagtggttagagaaattcatcttaaagatgaataagtggagtatct-gagttcgaaccccaatctctgcacatattgtgcattatccctt 25553221  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || |||||| |||| ||| ||||    
T  25553222 accaaatgaattaagctcatggg 25553244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 43027273 - 43027175
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||| ||| |||||||||||||||  || ||| ||||||  |||||||||| |||||| |||| |||| || ||||| ||||||||||||||||    
T  43027273 tcaagtagtctagtggctagagaaattcaccttaaaggtgaataaatggggtgtctggggttcgaacctcagcacccgcacaaattgtgcattatccct 43027175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 403
Target Start/End: Original strand, 2521381 - 2521434
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataa 403  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  2521381 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataa 2521434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 34107612 - 34107504
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||  |||||  |||||   |||||||||||||||||||||||||||     
T  34107612 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtcc-gggtttgaaccctgacccctgcacatattgtgcattatccctt 34107514  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  34107513 accaaatgag 34107504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 5003179 - 5003063
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || |||| ||||||||||  || |||||||||||||||||||||||||||   |||||||||| |||| ||||    |||| |||||||    
T  5003179 gtgtttgtttaaaatttaccaaatttatttataggaataacattccttggaatataaagatgcgaattttattccaaggtatttggataaaagatgtttg 5003080  T
Q  447 gttacctttataatatt 463  Q
    |||| | || |||||||    
T  5003079 gttaacattttaatatt 5003063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 5901807 - 5901906
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||  ||| ||||| |||||||||  ||||||||||||| ||||||||||  |||||   ||||| ||||||||| | ||||||||||||||||    
T  5901807 atcaagtagcctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggggtttgtaccccggcccctgcagaaattgtgcattatccct 5901906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 42541273 - 42541194
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||  |||||||||||||||||||  || ||| ||| || ||||||||||| |||||| ||||||||||||||||    
T  42541273 tcaagtagcctagcggctagagaaattcaccttaaaggtgagtaagtggggtgtctggggttcgaaccccagcccctgca 42541194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 17543067 - 17543165
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| || |||||||| |||  || |||||||||| ||||||||||  | |||| ||| || ||||||||||||||||||||||||||||    
T  17543067 tcaagtagcctagtggttagagaaagtcacattaaagatgaataagtggggtgtccggcgttcgaactccggcccctgcacatattgtgcattatccct 17543165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 18424143 - 18424221
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcatt 110  Q
    |||||||||||||||  || |||||||||| ||||| ||||  | |||| |||||| ||||||||||||||||||||||    
T  18424143 ggctagagaaattcaccttaaagatgaataagtgggatgtccggagttcgaaccccggcccctgcacatattgtgcatt 18424221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 41750064 - 41749967
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||| ||||  |||||||||||||  ||||| |||| ||||||||||||||||    
T  41750064 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggg-tgtccggggttcaaaccccgacccctacacacattgtgcattatccct 41749967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 1988072 - 1988157
Alignment:
Q  380 agaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||||||| ||||||||| ||   |||||||||| |||   |||  |||||||||||||||||| ||||||||||||||    
T  1988072 agaataacattccttagaatataaatatgagaattttattccaagatttttgggaaaaatatgtttggttaactttataatattcc 1988157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 462
Target Start/End: Original strand, 4875506 - 4875619
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattta-agaaaaatatgtttggt 448  Q
    ||||||| |||||| |||||||||||| || |||||| |||| |||||||||||||||   |||||||||| || | ||||| | ||||||||||||  |    
T  4875506 tttgtttcaagtttgtcaaatttattcttaggaataatattctttggaatataaagatgtgaattttattccaatgtatttagaaaaaaatatgttttct 4875605  T
Q  449 tacctttataatat 462  Q
    || | |||||||||    
T  4875606 taacattataatat 4875619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 31149096 - 31149187
Alignment:
Q  35 tagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    ||||||||||||  || ||||| || | ||||||||||| |||||| |||| || ||| ||||||||||||||||||||||| || |||||||    
T  31149096 tagagaaattcaccttaaagattaaaaagtggggtgtctggggttcgaacctcaaccc-tgcacatattgtgcattatcccttaccaaatgag 31149187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 33482636 - 33482728
Alignment:
Q  35 tagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    ||||||||||||| || |||||||||| |||||||||||  ||||| |||| | | ||||||| ||||||||||| || ||| || |||||||    
T  33482636 tagagaaattcatcttaaagatgaataagtggggtgtctgaggttcgaaccacggtccctgcatatattgtgcatcattccttaccaaatgag 33482728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 18949662 - 18949784
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| |||||||||||||||  || || ||||||| || ||||||  ||||||| ||||||  |||||||||||||  |||||||||| |     
T  18949662 tcaagtagtctagtggctagagaaattcacattaaa-atgaataagttgggtgttcagggttcgaaccccgacccctgcacatataatgcattatccgtt 18949760  T
Q  118 actaaatgagttaaactcgtggga 141  Q
    |  ||||||||||| ||| |||||    
T  18949761 atcaaatgagttaagctcatggga 18949784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 42678301 - 42678424
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||| | ||| || ||||||||||||  || |||||||||| ||||||||||  |||||| ||| ||   |||| | |||||||||||||||||||     
T  42678301 tcaagtaatctagtggttagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccgatccctacgcatattgtgcattatccctt 42678400  T
Q  118 actaaatgagttaaactcgtggga 141  Q
    || || | |||||||||| |||||    
T  42678401 accaagtaagttaaactcatggga 42678424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 457
Target Start/End: Original strand, 1623079 - 1623188
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || ||||  |||||||||||||  ||||||||| ||||||||||||||||   ||||||||| | | | |||||  ||| |||||||||    
T  1623079 gtgtttgtttcaattttactaaatttattcctagtaataacatttcttggaatataaagatgagaattttatt-tcaagtatttagaaaatatatgtttg 1623177  T
Q  447 gttacctttat 457  Q
    |||| ||||||    
T  1623178 gttaactttat 1623188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 27463503 - 27463612
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||| | ||| || |||||||||||| ||| |||||||||| ||||| | ||| |||||| || ||| || |||||| |||||||||||||| |||    
T  27463503 atcaagtaatctagtggttagagaaattcactttaaagatgaataagtgggttatct-gggttcgaatcccggctcctgcatatattgtgcattattcct 27463601  T
Q  117 aactaaatgag 127  Q
     || |||||||    
T  27463602 taccaaatgag 27463612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 6866626 - 6866513
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||  ||||| |||||||||  || ||||| |||| ||| ||||||  || ||| ||| || |  |||||||||||||||||||||||||     
T  6866626 tcaagtagtctactggctaaagaaattcaccttaaagataaataagtgaggtgtccgggattcgaactccggttcctgcacatattgtgcattatccctt 6866527  T
Q  118 actaaatgagttaa 131  Q
    || |||||||||||    
T  6866526 accaaatgagttaa 6866513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 403
Target Start/End: Original strand, 14253254 - 14253309
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataa 403  Q
    |||||||||||| |||| ||||||||||  || ||||||||||| |||||||||||    
T  14253254 tgtttgttttaaatttaccaaatttatttttaggaataacattctttggaatataa 14253309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 5207210 - 5207148
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttc 80  Q
    ||||||||| ||| ||||| |||||||||| || ||| |||||| ||||||||||| ||||||    
T  5207210 tcaagtagtctagtggctaaagaaattcatcttaaaggtgaataagtggggtgtctggggttc 5207148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 463
Target Start/End: Original strand, 14253343 - 14253397
Alignment:
Q  409 gaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatatt 463  Q
    |||||||||||| ||   ||||| |||||||||||||||||| ||||||||||||    
T  14253343 gaaattttattccaaaatatttaggaaaaatatgtttggttaactttataatatt 14253397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 16403572 - 16403534
Alignment:
Q  89 gcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    |||||||||||||||||||||||||||| || |||||||    
T  16403572 gcccctgcacatattgtgcattatcccttaccaaatgag 16403534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 31223696 - 31223642
Alignment:
Q  63 gtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    |||| |||||| ||||||||||||||||||||||| ||| | |||| ||||||||    
T  31223696 gtggagtgtctggggttcaaaccccagcccctgcatataatatgcaatatcccta 31223642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 33065234 - 33065332
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| || ||||||   | |||| ||||||  ||||| |||| ||||||||||||||||    
T  33065234 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtagggtgttcggagttcgaaccccgacccctacacacattgtgcattatccct 33065332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 36590915 - 36590841
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatag-aaattttattcta 422  Q
    ||||||||||||||||  |||||||||  || ||||||||||| |||||||||| | || | |||||||||||||    
T  36590915 gtttgttttaagtttactaaatttatttttaggaataacattcgttggaatatatatattgtaaattttattcta 36590841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 37592199 - 37592261
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttc 80  Q
    ||||||||| |||||||||||||||||||  || ||| | |||| ||||||||||| ||||||    
T  37592199 tcaagtagtctagcggctagagaaattcaccttaaaggtaaataagtggggtgtctggggttc 37592261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 40203256 - 40203354
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||| ||| ||||||||||||  |  || || ||||||| ||||||| ||| ||||||||||||   ||| | |||||||||| ||||||||||    
T  40203256 tcaagtagtctagtggctagagaaatctaccttaaaaatgaataagtggggtatctggggttcaaaccctgacccttacacatattgtacattatccct 40203354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 25444927 - 25444987
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat 407  Q
    |||| |||||||||||| |||||||||||   | ||||||||||  |||||||||||||||    
T  25444927 gtgtatgttttaagtttgtcaaatttattttaaggaataacattttttggaatataaagat 25444987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 7e-44; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 38363808 - 38363926
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  38363808 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 38363907  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  38363908 gttagctttataatattcc 38363926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 37392890 - 37392772
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  37392890 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 37392791  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  37392790 gttagctttataatattcc 37392772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 344 - 464
Target Start/End: Complemental strand, 10896563 - 10896443
Alignment:
Q  344 aacgtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgt 443  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| |||||||||||    
T  10896563 aacgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgt 10896464  T
Q  444 ttggttacctttataatattc 464  Q
    ||||||| |||||||||||||    
T  10896463 ttggttagctttataatattc 10896443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 18297839 - 18297955
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  18297839 gtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 18297938  T
Q  447 gttacctttataatatt 463  Q
    |||| ||||||||||||    
T  18297939 gttagctttataatatt 18297955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 26061871 - 26061989
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  26061871 gtgtttgttttaagtttaccaaatttattcctaggaataacattccttgtaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 26061970  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  26061971 gttaactttataatattcc 26061989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 32661278 - 32661160
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  32661278 gtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatgtttg 32661179  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  32661178 gttagctttataatattcc 32661160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 35818768 - 35818650
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  35818768 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 35818669  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  35818668 gttagctttataatattcc 35818650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 42755594 - 42755712
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||| |||||||||| ||||||||| ||||    
T  42755594 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatatgaagatgggaattttattccaaggaatttaggaaaaatatatttg 42755693  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  42755694 gttagctttataatattcc 42755712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 3049736 - 3049854
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||| | |||||||||| ||||||||||  |||||||||||||    
T  3049736 gtgtttgtttcaagtttatcaaatttattcataggaataacattccttgaaatataaagatgggaattttattcgaaggaatttagaaaaaatatgtttg 3049835  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  3049836 gttatctttataatattcc 3049854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 16313851 - 16313733
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  16313851 gtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 16313752  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  16313751 gttagctttataatattcc 16313733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 25837638 - 25837756
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||  || ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  25837638 gtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 25837737  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  25837738 gttagctttataatattcc 25837756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 38133082 - 38132964
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  38133082 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 38132983  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  38132982 gttagctttataatattcc 38132964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 348 - 465
Target Start/End: Complemental strand, 40197396 - 40197279
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    |||||| || ||||||| |||||||||||||| |||||| |||| ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  40197396 tgtttgcttcaagtttaccaaatttattcctaggaataatattctttggaatataaagatgggaattttattctaaggaatttaggaaaaatatgtttgg 40197297  T
Q  448 ttacctttataatattcc 465  Q
    ||| ||||||||||||||    
T  40197296 ttaactttataatattcc 40197279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 7930966 - 7931084
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||| |||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  7930966 gtgtttgtttcaagtttaccaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 7931065  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  7931066 gttagctttataatattcc 7931084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 12710372 - 12710490
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||| ||| || |||||||||||||     
T  12710372 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagaaatgtaggaaaaatatgtttc 12710471  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  12710472 gttagctttataatattcc 12710490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 18726964 - 18726846
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||  |||||||||||||||  ||||||||||| |||||||||| ||||||||||||||    
T  18726964 gtgtttgtttcaagtttaccaaatttatttctaggaataacattaattggaatataaagatgaaaattttattccaaggaatttaggaaaaatatgtttg 18726865  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  18726864 gttagctttataatattcc 18726846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 5020835 - 5020718
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||||||||||||||  || ||||||||||| |||||||||||||||   ||||||||||||||| ||||| ||||||||||||||    
T  5020835 gtgtttgtttcaagtttatcaaatttatttttaggaataacattctttggaatataaagatgataattttattctaaggtatttaggaaaaatatgtttg 5020736  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  5020735 gttaactttataatattc 5020718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 26602281 - 26602163
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| |||  |||||||||||||| || |||||||| | |||||||||| |||||||||| ||||||||||||||    
T  26602281 gtgtttgtttcaagtttaccaaatttattgctagaaataacattccttgaaacataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 26602182  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  26602181 gttagctttataatattcc 26602163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 21137474 - 21137357
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||  |||||||||||||||   ||||||||| ||||| |||||| |||||||||||||    
T  21137474 gtgtttgtttttagtttatcaaatttattacta-gaataacattttttggaatataaagatgagaattttattttaaggtatttaaaaaaaatatgtttg 21137376  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  21137375 gttaactttataatattcc 21137357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 1032674 - 1032566
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||| |||    
T  1032674 ggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaa 1032575  T
Q  132 actcgtggg 140  Q
     ||| ||||    
T  1032574 gctcatggg 1032566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 358 - 465
Target Start/End: Complemental strand, 1554688 - 1554580
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaa-gatagaaattttattctaaggaatttaagaaaaatatgtttggttaccttta 456  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||| ||| | |||||||||| |||||||||| |||||||||| |||||||  ||||    
T  1554688 aagtttaccaaatttattcttaggaataacattccttggaatataaaagatgggaattttattccaaggaatttaggaaaaatatggttggttagtttta 1554589  T
Q  457 taatattcc 465  Q
    |||||||||    
T  1554588 taatattcc 1554580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 347 - 449
Target Start/End: Original strand, 25899386 - 25899488
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||| || ||||||||||  || ||||||||||||||||||||||||||||| ||||||||||||||| |||||  ||||| |||||||    
T  25899386 gtgtttgtttcaagtgtaacaaatttatttttaggaataacattccttggaatataaagataggaattttattctaaggtatttagaaaaaagatgtttg 25899485  T
Q  447 gtt 449  Q
    |||    
T  25899486 gtt 25899488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 33444966 - 33444848
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||   ||||||||| ||||||||||||| | ||||||||||||||  ||||||||||  |||| |||||  |||||||||||||    
T  33444966 gtgtttgtttcaagtttactgaatttattcataagaataacatttcatggaatataaagatgaaaattttatttcaaggtatttagaaaaaatatgtttg 33444867  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  33444866 gttaactttataatattcc 33444848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 16219285 - 16219168
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||  |||||||   |||||||||| |||| |||||  ||||| |||||||    
T  16219285 gtgtttgttttaagtttatccaatttattcctaggaataacgttccttggaacttaaagatgagaattttattccaaggtatttagaaaaaagatgtttg 16219186  T
Q  447 gttacctttataatattc 464  Q
    |||| | |||||||||||    
T  16219185 gttaacattataatattc 16219168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 41432466 - 41432585
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaa--atatgtt 444  Q
    |||||||||||||||||||||||||||||  || |||||||||| |||| || |||||||| |||||||||||| |||| |||||| ||||  |||||||    
T  41432466 gtgtttgttttaagtttatcaaatttatttttaggaataacatttcttgaaacataaagatggaaattttattccaaggcatttaaaaaaaatatatgtt 41432565  T
Q  445 tggttacctttataatattc 464  Q
    || ||| | |||||||||||    
T  41432566 tgcttaacattataatattc 41432585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 41454818 - 41454926
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| |||||||||||||||||||||||||||| || ||||||| |||    
T  41454818 ggctagagaaattcacattaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 41454917  T
Q  132 actcgtggg 140  Q
     ||| ||||    
T  41454918 gctcatggg 41454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 38064095 - 38063973
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    |||||||||  || || ||||||||||||  || |||||||||| ||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||     
T  38064095 tcaagtagtccagtggttagagaaattcaccttaaagatgaataagtggggtgtctggggttcaacccccagtccctgcacaaattgtgcattatccctt 38063996  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || |||||| |||| ||| ||||    
T  38063995 accaaatgaattaagctcatggg 38063973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 4259977 - 4259864
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| |||||| |||  |||||  |||||| ||||||||||||||||||||||||||||     
T  4259977 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggagtccggggttggaaccccggcccctgcacatattgtgcattatccctt 4259878  T
Q  118 actaaatgagttaa 131  Q
    || |||||||||||    
T  4259877 accaaatgagttaa 4259864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 38289212 - 38289321
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    |||||||| |||| |||||||||||||||  || |||||||||| ||||||||| |  ||||| ||||||  |||||||||||||||||||||||||||     
T  38289212 tcaagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtttgaggttcgaaccccgacccctgcacatattgtgcattatccctt 38289311  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  38289312 accaaatgag 38289321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 34672088 - 34672207
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatat--aaagatagaaattttattctaaggaatttaagaaaaatatgtt 444  Q
    |||||||||||||||||||||||||||||  ||  ||||||| |||||| |||||  |||||| |||||||||| ||||||  ||||  |||||||| ||    
T  34672088 gtgtttgttttaagtttatcaaatttatttttagaaataacagtccttgaaatataaaaagatggaaattttatactaaggtttttagaaaaaatatttt 34672187  T
Q  445 tggttacctttataatattc 464  Q
    |||||| |||||||||||||    
T  34672188 tggttaactttataatattc 34672207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 385 - 465
Target Start/End: Original strand, 35394156 - 35394236
Alignment:
Q  385 aacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||| |||||||||||   |||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  35394156 aacattccttgaaatataaagatgagaattttattccaaggtatttaagaaaaatatgtttggttaactttataatattcc 35394236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 19161085 - 19160967
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat-agaaattttattctaaggaattta-agaaaaatatgtt 444  Q
    |||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||| ||||||  | || ||||| | |||||||||||    
T  19161085 gtgtttgtttcaagtttatcaaatttattctcaagaataacattctttggaatataaagatgagaaa-tttatttcagggtatttagaaaaaaatatgtt 19160987  T
Q  445 tggttacctttataatattc 464  Q
    |||||| | |||||||||||    
T  19160986 tggttagcattataatattc 19160967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 43413863 - 43413961
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||| | || ||| |||||||||||||||||| ||||||||||||||||    
T  43413863 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttgggattcgaaccccagcccctgcacaaattgtgcattatccct 43413961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 39104724 - 39104608
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| |||||||||||| ||  || |||||||||| ||||| ||||  |||||| |||||| ||| ||||||||||||||||||||||||     
T  39104724 tcaagtagtctagtggctagagaaatccaccttaaagatgaataagtggg-tgtccggggttcgaaccccggccgctgcacatattgtgcattatccctt 39104626  T
Q  118 actaaatgagttaaactc 135  Q
    || ||||||| |||||||    
T  39104625 accaaatgagctaaactc 39104608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 460
Target Start/End: Complemental strand, 43872309 - 43872196
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||  |||||||||| ||| ||||||||||||||| |||||| ||||  ||||||||||| |||| |||||  ||||| |||||||    
T  43872309 gtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtatttagaaaaaagatgtttg 43872210  T
Q  447 gttacctttataat 460  Q
    |||| | |||||||    
T  43872209 gttaacattataat 43872196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 30466763 - 30466675
Alignment:
Q  52 aagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| |||| || ||||||| ||| ||| ||||    
T  30466763 aagatgaataagtggggtgtctgaggttcgaaccccagcccctgcacatattgtgcattagcccttaccaaatgagctaagctcatggg 30466675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 468
Target Start/End: Original strand, 15226695 - 15226814
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggt 448  Q
    |||||||| || |||| ||||||||||  || ||||||| |||||||||||||||||||   |||||||||  |||| |||||  |||||||||||||||    
T  15226695 gtttgtttcaattttaccaaatttattattaggaataactttccttggaatataaagatgagaattttatttcaaggtatttagaaaaaatatgtttggt 15226794  T
Q  449 tacctttataatattccaag 468  Q
    || |||||||| | ||||||    
T  15226795 taactttataaaaatccaag 15226814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 36103933 - 36104012
Alignment:
Q  52 aagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||| ||||||||| | |||||| |||||| |||||||||||||||||||||||||| | || |||||||||||    
T  36103933 aagatgaataagtggggtgtttggggttcgaaccccggcccctgcacatattgtgcattatcctttaccaaatgagttaa 36104012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 465
Target Start/End: Complemental strand, 6805939 - 6805848
Alignment:
Q  378 taagaataacattccttggaatataaagatagaaattttattctaagg----aatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||||||||||||||| ||||||||||| | |||||||||| ||||     ||||| |||||||||||||||||| ||||||||||||||    
T  6805939 taagaataacattccttgaaatataaagatgggaattttattccaaggtatatatttaggaaaaatatgtttggttaactttataatattcc 6805848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 45536836 - 45536738
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||| || ||| ||||||||||||||| | |||||||||||| ||||||||||  |||||| ||| || ||||||||||| ||| ||||||||||||    
T  45536836 tcaagttgtctagtggctagagaaattcactattaagatgaataagtggggtgtccggggttcgaactccggcccctgcacaaattttgcattatccct 45536738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 5904366 - 5904467
Alignment:
Q  33 gctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaa 132  Q
    ||||||||||||||| || |||||||||| ||||| ||||  |||||| ||||||  ||||||||||||||||||||||||  | || ||||||| ||||    
T  5904366 gctagagaaattcatcttaaagatgaataagtgggatgtccggggttcgaaccccgtcccctgcacatattgtgcattatcttttaccaaatgagctaaa 5904465  T
Q  133 ct 134  Q
    ||    
T  5904466 ct 5904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 1360112 - 1360207
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcc 114  Q
    ||||||||  ||| || |||||||||||| ||| || ||||||| ||||||||||  |||||| ||||||||||||| |||||||||||||||||||    
T  1360112 tcaagtagcctagtggttagagaaattcactttaaa-atgaataagtggggtgtccggggttcgaaccccagcccctacacatattgtgcattatcc 1360207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 44828444 - 44828532
Alignment:
Q  52 aagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||||||| ||| ||||||| |||||| |||||||| ||||||||| |||||||||||||||| || ||||||| ||| ||| ||||    
T  44828444 aagatgaataagtgtggtgtctggggttcgaaccccagaccctgcacaaattgtgcattatcccttaccaaatgagctaagctcatggg 44828532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 11052575 - 11052674
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| ||||||||| ||||||||| |||   |||||||||||   |||||||||||||| || |||||||||||    
T  11052575 ggctagagaaattcaccttaaagatgaataagtggggtgtttagggttcacaccttggcccctgcacaatatgtgcattatcccttaccaaatgagttaa 11052674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 7317168 - 7317222
Alignment:
Q  411 aattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||    
T  7317168 aattttattctaaggtatttaggaaaaatatgtttggttaactttataatattcc 7317222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 12831672 - 12831566
Alignment:
Q  34 ctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaac 133  Q
    ||||||||||||| ||||||| | | || ||||| ||||| || ||| ||| |||| |||||||||||||||||||| ||| | || |||||||||||||    
T  12831672 ctagagaaattcacttttaaggtaattaagtgggatgtctgggattcgaactccagaccctgcacatattgtgcattgtcctttaccaaatgagttaaac 12831573  T
Q  134 tcgtggg 140  Q
    || ||||    
T  12831572 tcatggg 12831566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 22652801 - 22652703
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||| |||| |||||||||||||||  ||||| |||||||  |||||||||  |||||| ||| || ||||||||||| ||| ||||||||||||    
T  22652801 tcaagtagcttagtggctagagaaattcacctttaacatgaataattggggtgtccggggttcgaacaccggcccctgcacaaattatgcattatccct 22652703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 29421835 - 29421714
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaa-tataaagatagaaatt---ttattctaaggaatttaagaaaaatatg 442  Q
    ||||||||||||| ||||  ||||||||||||| ||||||||||  |||||| |||||||||  |||||   ||||||||||| |||||  ||||||||     
T  29421835 gtgtttgttttaa-tttacgaaatttattcctatgaataacattatttggaaatataaagatgaaaattgttttattctaaggtatttagaaaaaatata 29421737  T
Q  443 tttggttacctttataatattcc 465  Q
    |||| ||| ||||||||||||||    
T  29421736 tttgattaactttataatattcc 29421714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 31117870 - 31117749
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattt---aagaaaaatatgt 443  Q
    |||||||||| |||||||||||||||||   || ||||||||||| |||||||||||||||   |||||||||  || | ||||   || ||| |||||     
T  31117870 gtgtttgtttcaagtttatcaaatttatatttaggaataacattcattggaatataaagatgagaattttatttcaaagtatttagaaaaaaatatatgc 31117771  T
Q  444 ttggttacctttataatattcc 465  Q
    ||||||| ||||||||||||||    
T  31117770 ttggttaactttataatattcc 31117749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 465
Target Start/End: Complemental strand, 41228990 - 41228939
Alignment:
Q  414 tttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  41228990 tttattccaaggaatttaggaaaaatatgtttggttagctttataatattcc 41228939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 3311544 - 3311434
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    ||||||| |||||||| ||||||||||||| ||||||||||  |||||| |||||    ||||||| | ||||| ||||||||||  | |||||||||||    
T  3311544 ggctagaaaaattcatctttaagatgaataagtggggtgtccggggttcgaaccctgatccctgcataaattgtacattatcccttgccaaatgagttaa 3311445  T
Q  132 actcgtgggac 142  Q
     ||| ||||||    
T  3311444 gctcatgggac 3311434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 34037925 - 34038023
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||| ||| || |||| ||||||| ||| |||||||||| ||||| ||||| || ||| ||| ||  ||||||||||||||||| |||||||||    
T  34037925 tcaagtagtctagtggttagaaaaattcactttaaagatgaataagtgggatgtctgggattcgaactccgccccctgcacatattgtgtattatccct 34038023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 13906660 - 13906725
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||| |||||| |||||||||||||||||||||||||||| || ||||||| ||| ||| ||||    
T  13906660 gggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcatggg 13906725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 33533736 - 33533663
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattc 420  Q
    |||||||||| |||||| ||||||||||||||| |||||  ||||||| ||||||||||||   ||||||||||    
T  33533736 gtgtttgtttcaagtttgtcaaatttattcctaggaatattattcctttgaatataaagatgtgaattttattc 33533663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 37124076 - 37124194
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatt--taagaaaaatatgtt 444  Q
    |||||| ||||||||||||||||||||||  ||| ||||||| |  |||||||||||||||   |||||||||| |||| |||   || ||||| |||||    
T  37124076 gtgtttattttaagtttatcaaatttattgttaaaaataacaatatttggaatataaagatgagaattttattc-aaggtattcaaaaaaaaaaaatgtt 37124174  T
Q  445 tggttacctttataatattc 464  Q
    | |||| |||||||||||||    
T  37124175 tcgttaactttataatattc 37124194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 438
Target Start/End: Complemental strand, 37982131 - 37982040
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat-agaaattttattctaaggaatttaagaaaaa 438  Q
    |||||||||| ||||||| ||||||||||  || |||||||||||||| ||| |||||||| |||| |||||||| |||| |||||| |||||    
T  37982131 gtgtttgtttcaagtttaccaaatttatttttaggaataacattcctt-gaacataaagatgagaatttttattccaaggtatttaaaaaaaa 37982040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 279976 - 280082
Alignment:
Q  20 aagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaac 119  Q
    ||||||| ||||| |||||||||||||  || || |||||||  | |||||||  |||||| ||||| | |||||||||||||||| |||||||||| ||    
T  279976 aagtagtctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaacccta-cccctgcacatattgtacattatcccttac 280074  T
Q  120 taaatgag 127  Q
     |||||||    
T  280075 caaatgag 280082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 635876 - 635770
Alignment:
Q  20 aagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaac 119  Q
    ||||||| ||||| |||||||||||||  || || |||||||  | |||||||  |||||| ||||| | |||||||||||||||| |||||||||| ||    
T  635876 aagtagtctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaacccta-cccctgcacatattgtacattatcccttac 635778  T
Q  120 taaatgag 127  Q
     |||||||    
T  635777 caaatgag 635770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 821679 - 821573
Alignment:
Q  20 aagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaac 119  Q
    ||||||| ||||| |||||||||||||  || || |||||||  | |||||||  |||||| ||||| | |||||||||||||||| |||||||||| ||    
T  821679 aagtagtctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaacccta-cccctgcacatattgtacattatcccttac 821581  T
Q  120 taaatgag 127  Q
     |||||||    
T  821580 caaatgag 821573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 8350555 - 8350441
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaa-gatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||| ||| || |||| |||||||| || || |||||||| ||||||||||   ||||| ||| || ||||||||| |||||||| |||||| ||    
T  8350555 tcaagtagtctagtggttagataaattcatcttaaaagatgaataagtggggtgtccgaggttcgaactccggcccctgcatatattgtgtattatcact 8350456  T
Q  117 aactaaatgagttaa 131  Q
     || |||||||||||    
T  8350455 taccaaatgagttaa 8350441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 401
Target Start/End: Original strand, 35394085 - 35394139
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatat 401  Q
    |||||||||| ||||||||||||||||||| ||  |||||||||| |||||||||    
T  35394085 gtgtttgtttcaagtttatcaaatttattcttagtaataacattctttggaatat 35394139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 43508445 - 43508523
Alignment:
Q  38 agaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||  |||||| |||||| ||||||||||  ||||||||||||| |||||| || ||||| |||||| |||||    
T  43508445 agaaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccggcccctacatatattatgcattgtccct 43508523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 10162025 - 10161984
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  10162025 gggttcgaaccccaacccctgcacatattgtgcattatccct 10161984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 23139155 - 23139094
Alignment:
Q  55 atgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||| ||||||||||| | |||| |||| | ||||||||||| ||||||||||||||||    
T  23139155 atgaataagtggggtgtctggtgttcgaacctcggcccctgcacacattgtgcattatccct 23139094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 27102310 - 27102403
Alignment:
Q  19 caagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattat 112  Q
    |||||||| ||| |||||||||||||||  ||||| ||||| | ||||||||| | ||| || ||||||| | | |||||||||| ||||||||    
T  27102310 caagtagtctagtggctagagaaattcacctttaacatgaaaaagtggggtgtttggggatcgaaccccatcacatgcacatattatgcattat 27102403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 10201381 - 10201285
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatc 113  Q
    ||||||||| ||| |||||||||||||||| ||| ||| ||||||  || ||||||  |||||| ||||||  ||||| || ||||| |||||||||    
T  10201381 atcaagtagcttaacggctagagaaattcactttaaaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatatattatgcattatc 10201285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 33820389 - 33820469
Alignment:
Q  35 tagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccc 115  Q
    ||||||||||||  |||||||||||||  |||||||||| || ||| ||||||  || ||||||| |||||| ||||||||    
T  33820389 tagagaaattcacctttaagatgaataattggggtgtctgggattcgaaccccgacctctgcacaaattgtgtattatccc 33820469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 41845420 - 41845515
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    ||||| |||||||||  || ||||||||||  | ||||||   |||||| ||||||   |||||||||||||||||||||||||| || |||||||    
T  41845420 ggctaaagaaattcaccttaaagatgaataaatagggtgttcggggttcgaaccccgatccctgcacatattgtgcattatcccttaccaaatgag 41845515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 5184897 - 5184943
Alignment:
Q  51 taagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    |||| |||||| |||||||||| ||||||| ||||||||||||||||    
T  5184897 taaggtgaataagtggggtgtccagggttcgaaccccagcccctgca 5184943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 12927851 - 12927801
Alignment:
Q  91 ccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggga 141  Q
    ||||||||| |||||||||||||||  |||||||||||||| ||| |||||    
T  12927851 ccctgcacaaattgtgcattatcccctactaaatgagttaagctcatggga 12927801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 31153603 - 31153505
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtgggg-tgtctagggttcaaaccccagcccctgcacatattgtgcattatccc 115  Q
    ||||||||| |||  ||||||||||| ||  || ||||||||||  ||||| ||||   ||||| || ||| |||||||||||||||||||||||||||    
T  31153603 tcaagtagtctagtagctagagaaatccaccttaaagatgaataaatgggggtgtccgaggttcgaatcccggcccctgcacatattgtgcattatccc 31153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 36587627 - 36587749
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||| ||||||||||| || ||||| |||| |||||||||   |||||  ||||||  ||||| |||||||||||  ||||| ||     
T  36587627 tcaagtagcctagtggctcgagaaattcatcttaaagataaataagtggggtgttcggggttggaaccccgacccctacacatattgtgttttatctctt 36587726  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||||||| ||| ||||    
T  36587727 accaaatgagttaagctcatggg 36587749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 43456661 - 43456747
Alignment:
Q  50 ttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcg 136  Q
    |||| ||||||| ||||||||||  |||||| ||||||  ||| | || |||||||||||||||||| || ||||||| ||| ||||    
T  43456661 ttaaaatgaataagtggggtgtccggggttcgaaccccgacccttacatatattgtgcattatcccttaccaaatgagctaagctcg 43456747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 17855757 - 17855688
Alignment:
Q  28 tagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||||| ||||||| ||| ||  |||||| ||||||||||  |||||| |||||| |||||||||    
T  17855757 tagcggctagaaaaattcactttaaatgtgaataagtggggtgtccggggttcgaaccccggcccctgca 17855688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 16973068 - 16973028
Alignment:
Q  90 cccctgcacatattgtgcattatccctaactaaatgagtta 130  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  16973068 cccctgcacatattgtgcattatcccttaacaaatgagtta 16973028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 19957308 - 19957396
Alignment:
Q  28 tagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||| ||||||||||||||  || ||| |||||| ||||||||||  |||||| |||| |  |||||||| ||| | ||||||||||||    
T  19957308 tagctgctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatccct 19957396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 7e-44; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 2657427 - 2657545
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  2657427 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 2657526  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  2657527 gttaactttataatattcc 2657545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 18897648 - 18897766
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  18897648 gtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 18897747  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  18897748 gttagctttataatattcc 18897766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 10246460 - 10246342
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  10246460 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 10246361  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  10246360 gttagctttataatattcc 10246342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 8029030 - 8029148
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  8029030 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaagaaatttaggaaaaatatgtttg 8029129  T
Q  447 gttacctttataatattcc 465  Q
    |||  ||||||||||||||    
T  8029130 gttggctttataatattcc 8029148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 14170742 - 14170860
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  14170742 gtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 14170841  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  14170842 gttagctttataatattcc 14170860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 354 - 462
Target Start/End: Complemental strand, 7344831 - 7344723
Alignment:
Q  354 ttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacct 453  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||   ||||||||||||||||||||| |||||||||||||||||| ||    
T  7344831 ttttaagtttatcaaatttattcctaggaataacattccttggaatataaatatgagaattttattctaaggaatttaggaaaaatatgtttggttagct 7344732  T
Q  454 ttataatat 462  Q
    |||||||||    
T  7344731 ttataatat 7344723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 1316746 - 1316864
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  1316746 gtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 1316845  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  1316846 gttagctttataatattcc 1316864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 7053922 - 7053804
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||| || | |||||||||| |||||||||| ||||||||||||||    
T  7053922 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaatttatgaaaaatatgtttg 7053823  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  7053822 gttagctttataatattcc 7053804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 16968652 - 16968769
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  16968652 gtgtttgtttcaagtttatcaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 16968751  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  16968752 gttagctttataatattc 16968769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 465
Target Start/End: Complemental strand, 6706095 - 6705978
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| ||||||| ||| |||||| ||| ||||||||||||||| |||||||||||   ||||||||||||||| |||||  |||||||| |||||    
T  6706095 tgtttgtttcaagtttaccaattttatttctaggaataacattccttgaaatataaagatgagaattttattctaaggtatttagaaaaaatatatttgg 6705996  T
Q  448 ttacctttataatattcc 465  Q
    ||| ||||||||||||||    
T  6705995 ttaactttataatattcc 6705978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 29321953 - 29322061
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| |||||||||||||||  || ||||| |||| ||||| ||||| |||||| |||||||||||||||||||||||||||||||||||     
T  29321953 tcaagtagtctagtggctagagaaattcaccttaaagataaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatccctt 29322052  T
Q  118 actaaatga 126  Q
    || ||||||    
T  29322053 accaaatga 29322061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 6228237 - 6228359
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| ||||||||||||||||||||||||||||     
T  6228237 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccctt 6228336  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  6228337 accaaatgagctaagctcatggg 6228359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 348 - 462
Target Start/End: Complemental strand, 21008322 - 21008208
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    ||||||||| |||||||| |||||||||  || |||||||||| ||||||||||||||||   |||||||||| |||| |||||  ||||||||||||||    
T  21008322 tgtttgtttcaagtttattaaatttatttttatgaataacatttcttggaatataaagatgagaattttattccaaggcatttagaaaaaatatgtttgg 21008223  T
Q  448 ttacctttataatat 462  Q
    ||| |||||||||||    
T  21008222 ttaactttataatat 21008208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 20415553 - 20415661
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||  |||||||||||||||||||||||||||| || ||||||| |||    
T  20415553 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccctggcccctgcacatattgtgcattatcccttacaaaatgagctaa 20415652  T
Q  132 actcgtggg 140  Q
    |||| ||||    
T  20415653 actcatggg 20415661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 18903344 - 18903442
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| |||||||||||||||||| |||||||||    
T  18903344 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgtattatccct 18903442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 24794877 - 24794981
Alignment:
Q  23 tagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaa 122  Q
    |||| ||| |||||||||||||||| || || ||||||| ||||| ||||  |||||| || |||| ||||||||||||||||||||||||||| || ||    
T  24794877 tagtctagtggctagagaaattcatcttaaatatgaataagtgggatgtccggggttcgaatcccaacccctgcacatattgtgcattatcccttaccaa 24794976  T
Q  123 atgag 127  Q
    |||||    
T  24794977 atgag 24794981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 461
Target Start/End: Original strand, 8314623 - 8314735
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggt 448  Q
    |||||||||||||||||||||||||||||||  | ||||||| |||| |||||| | ||  |||||||||||||||  |||||  ||||| |||||| ||    
T  8314623 gtttgttttaagtttatcaaatttattcctagaattaacattacttgcaatatacacatgtaaattttattctaagatatttagaaaaaaaatgtttagt 8314722  T
Q  449 tacctttataata 461  Q
    || | ||||||||    
T  8314723 taacattataata 8314735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 1128393 - 1128509
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaa---gatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcc 114  Q
    ||||||||| ||| | |||||||||||||  || ||   ||||||||  |||||||||| |||||| ||||||| |||||||||||||| ||||||||||    
T  1128393 tcaagtagtctagtgactagagaaattcaccttaaagatgatgaataaatggggtgtctggggttcgaaccccaacccctgcacatattatgcattatcc 1128492  T
Q  115 ctaactaaatgagttaa 131  Q
    || |  |||||||||||    
T  1128493 cttatcaaatgagttaa 1128509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 11570125 - 11570071
Alignment:
Q  350 tttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaa 404  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11570125 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaa 11570071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 465
Target Start/End: Complemental strand, 14781940 - 14781836
Alignment:
Q  361 tttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataat 460  Q
    |||| |||||||||||||  ||||||||||| |||||| ||||||||   |||||||||| |||| |||||  ||||| ||||||| ||| | |||||||    
T  14781940 tttaccaaatttattcctgggaataacattcattggaacataaagatgagaattttattccaaggtatttagaaaaaagatgtttgcttaacattataat 14781841  T
Q  461 attcc 465  Q
    |||||    
T  14781840 attcc 14781836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 19221818 - 19221695
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||| | ||| |||||||||||||||  || || ||||| |  |||||||||| | |||| |||| |||||||||||||| || |||||||| | |     
T  19221818 tcaagtaatctagtggctagagaaattcaccttaaaaatgaacaaatggggtgtctggagttcgaacctcagcccctgcacatgttatgcattattcttc 19221719  T
Q  118 actaaatgagttaaactcgtggga 141  Q
    || ||||||||||||||| |||||    
T  19221718 accaaatgagttaaactcatggga 19221695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 4854283 - 4854381
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| || |||||||||| |  || |||||||||| ||||||||||  |||||| |||||| ||||||||||| ||||| ||||||||||    
T  4854283 tcaagtaggctagtggttagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacacattgtacattatccct 4854381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 17217076 - 17216954
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||  | |||| ||| ||  ||||| |||||||| ||||||||||||     
T  17217076 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaactccgacccctacacatattatgcattatccctt 17216977  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  17216976 accaaatgagctaagctcatggg 17216954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 11611472 - 11611411
Alignment:
Q  33 gctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccct 94  Q
    ||||||||||||||  || |||||||||| |||||||||| ||||||| |||||||||||||    
T  11611472 gctagagaaattcacattaaagatgaataagtggggtgtccagggttcgaaccccagcccct 11611411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 15717047 - 15717112
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||| |||||| |||||||||||||||||||||||||||| || ||||||| ||| ||| ||||    
T  15717047 gggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctcatggg 15717112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 19748185 - 19748108
Alignment:
Q  50 ttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    |||| ||||||| ||||||||||   ||||| |||||||  |||||||||||||||||||||||||| || |||||||    
T  19748185 ttaaaatgaataagtggggtgtccgtggttcgaaccccaatccctgcacatattgtgcattatcccttaccaaatgag 19748108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 7954913 - 7954997
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||||||||| || |||||||||| ||||| |||   ||||||  ||| |  |||||||||||||||||||||||||||    
T  7954913 ggctagagaaattcatcttaaagatgaataagtgggatgttcggggttcgcacctcgccccctgcacatattgtgcattatccct 7954997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 9762384 - 9762266
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattta-agaaaaatatgttt 445  Q
    |||||||||| ||||||| ||| ||||||  || ||||||||||||||||| |||||| ||   |||||||||| |||| ||||| | ||||| ||| ||    
T  9762384 gtgtttgtttcaagtttaccaagtttattattaggaataacattccttggattataaatatgtgaattttattcaaaggtatttagataaaaagatgatt 9762285  T
Q  446 ggttacctttataatattc 464  Q
    || || | |||||||||||    
T  9762284 gggtaacattataatattc 9762266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 11552989 - 11552891
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||  ||| ||||||| ||||| |  || |||||||||| |||||||| || |||||| |||||| ||||||||||| ||||| | ||||||||    
T  11552989 tcaagtagactagtggctagaaaaatttaccttaaagatgaataagtggggtgcctggggttcgaaccccggcccctgcacacattgtacgttatccct 11552891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 31637448 - 31637339
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || || || |||| || |||||||   || || ||||||  |||||||| |||||||||||||||||  || |||||||||||    
T  31637448 ggctagagaaattcaccttaaaaataaataagtagggtgtccgaggctcgaaccccgacccctgcaaatattgtgcattatcccataccaaatgagttaa 31637349  T
Q  132 actcgtggga 141  Q
     |||||||||    
T  31637348 gctcgtggga 31637339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 32470787 - 32470708
Alignment:
Q  34 ctagagaaattcatttttaagatgaataggt-ggggtgtctagggttcaaaccccagcccctgcacatattgtgcattat 112  Q
    |||||||||||||  || ||| |||||| || |||||||||  |||||||||| ||||||||||| ||||| ||||||||    
T  32470787 ctagagaaattcaccttaaaggtgaataagtaggggtgtctgaggttcaaacctcagcccctgcatatattatgcattat 32470708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5641667 - 5641721
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtc 72  Q
    ||||||||| |||||||||||||||||||  || ||| |||||| ||||||||||    
T  5641667 tcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtgtc 5641721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 21874269 - 21874311
Alignment:
Q  89 gcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||| ||||||||||||||||||||||| || |||||||||||    
T  21874269 gcccatgcacatattgtgcattatcccttaccaaatgagttaa 21874311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 25091090 - 25091172
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcc 114  Q
    ||||||||||| |||  ||||||||||||| ||||||||||   ||| | |||||| | ||||| ||| ||||||||||||||    
T  25091090 ggctagagaaaatcacctttaagatgaataagtggggtgtccgaggtacgaaccccggtccctgaacaaattgtgcattatcc 25091172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 9357225 - 9357176
Alignment:
Q  67 ggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||| | |||| |||||||||||||||||| ||||| ||||||||||    
T  9357225 ggtgtctggagttcgaaccccagcccctgcacaaattgtacattatccct 9357176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 25045794 - 25045749
Alignment:
Q  82 aaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    |||| |||||||||||||||||||| ||||||||| || |||||||    
T  25045794 aacctcagcccctgcacatattgtgaattatcccttaccaaatgag 25045749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 7164812 - 7164760
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtg 70  Q
    ||||||||| |||||||||||||||||||  || ||| |||||| ||||||||    
T  7164812 tcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtg 7164760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 30422157 - 30422209
Alignment:
Q  90 cccctgcacatattgtgcattatccctaactaaatgagttaaactcgtgggac 142  Q
    ||||| |||||||||| |||||||||| || ||||||||||| ||| ||||||    
T  30422157 cccctacacatattgtacattatcccttaccaaatgagttaagctcatgggac 30422209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 8406621 - 8406742
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  8406621 gtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 8406720  T
Q  447 gttacctttataatattccaag 468  Q
    |||| |||||||||||||||||    
T  8406721 gttagctttataatattccaag 8406742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 556050 - 555932
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  556050 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 555951  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  555950 gttagctttataatattcc 555932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 4765904 - 4765786
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||    
T  4765904 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatatgtttg 4765805  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  4765804 gttagctttataatattcc 4765786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 22936256 - 22936138
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  22936256 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 22936157  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  22936156 gttagctttataatattcc 22936138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 6091442 - 6091560
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  6091442 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 6091541  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  6091542 gttagctttataatattcc 6091560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 11855999 - 11855881
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  11855999 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 11855900  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  11855899 gttaactttataatattcc 11855881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 18411936 - 18412054
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  18411936 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 18412035  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  18412036 gttagctttataatattcc 18412054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 27481084 - 27481202
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  27481084 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 27481183  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  27481184 gttagctttataatattcc 27481202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 28602283 - 28602401
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||  || ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  28602283 gtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagataggaattttattccaaggaatttaggaaaaatatgtttg 28602382  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  28602383 gttagctttataatattcc 28602401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 29543359 - 29543241
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||||||||  |||||||||||||    
T  29543359 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgtttg 29543260  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  29543259 gttagctttataatattcc 29543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 12970874 - 12970757
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||||||    
T  12970874 gtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 12970775  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  12970774 gttagctttataatattc 12970757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 19065849 - 19065731
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||||||||||  ||| |||||||||    
T  19065849 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaatatatgtttg 19065750  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  19065749 gttagctttataatattcc 19065731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 32535664 - 32535781
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||||| | ||||||| || |||||||||| ||||||||||||||    
T  32535664 gtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttaatccaaggaatttaggaaaaatatgtttg 32535763  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  32535764 gttagctttataatattc 32535781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 347 - 458
Target Start/End: Complemental strand, 8646734 - 8646623
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| ||||||||    
T  8646734 gtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagataggaattttattccaaggaatttaggaaaattatgtttg 8646635  T
Q  447 gttacctttata 458  Q
    |||| |||||||    
T  8646634 gttagctttata 8646623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 6930369 - 6930487
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||| ||||| |||||   ||||||||| ||||| |||||| |||||||||||||    
T  6930369 gtgtttgttttaagtttatcaaatttattcatatgaataacattccttgaaatatcaagatgagaattttattttaaggtatttaaaaaaaatatgtttg 6930468  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  6930469 gttaactttataatattcc 6930487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 14207165 - 14207047
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||| |||||||||||||||   |||||||||  |||||||||| ||||||||||||||    
T  14207165 gtgtttgtttcaagtttacaaaatttattcctaggaataacattcattggaatataaagatgagaattttatttcaaggaatttaggaaaaatatgtttg 14207066  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  14207065 gttaactttataatattcc 14207047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 26637365 - 26637247
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||| ||| ||||||||||||||||||  || ||||||||||||||||||||||||||| | |||||||||| |||| |||||  |||||| ||||||    
T  26637365 gtgtttatttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggtatttagaaaaaatgtgtttg 26637266  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  26637265 gttaactttataatattcc 26637247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 36703509 - 36703627
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| || |||| ||||||||||| || ||||||||||||||||||| |||||||   |||||||||  |||||||||| ||||||||||||||    
T  36703509 gtgtttgtttcaaatttaccaaatttattcataggaataacattccttggaatttaaagatgagaattttatttcaaggaatttaggaaaaatatgtttg 36703608  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  36703609 gttagctttataatattcc 36703627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 38503234 - 38503356
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||  |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| ||||||||||||||||||||||||||||     
T  38503234 tcaagtagtctattggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccctt 38503333  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  38503334 accaaatgagctaagctcatggg 38503356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 1664458 - 1664575
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| ||||||||||||| ||||||| ||| |||| |||||||||||   |||||||||  |||| |||||  |||||||||||||    
T  1664458 gtgtttgtttcaagtttaccaaatttattcctgagaataatatttcttgaaatataaagatgagaattttatttcaaggtatttagaaaaaatatgtttg 1664557  T
Q  447 gttacctttataatattc 464  Q
    |||| |||||||||||||    
T  1664558 gttaactttataatattc 1664575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 15470598 - 15470711
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||||||| |||||||||||||||  || ||||||||||  |||||||||| |||||| || | |||||| |||||||||||||||||||||||     
T  15470598 tcaagtagtttagtggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaatctcagcccttgcacatattgtgcattatccctt 15470697  T
Q  118 actaaatgagttaa 131  Q
    || |||||| ||||    
T  15470698 accaaatgaattaa 15470711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 31250251 - 31250143
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaa 131  Q
    |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| |||||||||||||||||||||||||||| || ||||||| |||    
T  31250251 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 31250152  T
Q  132 actcgtggg 140  Q
     ||| ||||    
T  31250151 gctcatggg 31250143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 43227975 - 43227875
Alignment:
Q  27 ttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatga 126  Q
    |||| |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| |||||||||||||||||||||||||||| || ||||||    
T  43227975 ttagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatga 43227876  T
Q  127 g 127  Q
    |    
T  43227875 g 43227875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 930915 - 931013
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    ||||||||||||| | |||||||||||||  ||||||||||||| ||||| |||||  ||||| ||||||| ||||||||||||||||||||| |||||    
T  930915 tcaagtagtttagtgactagagaaattcacctttaagatgaataagtgggatgtctgaggttcgaaccccaacccctgcacatattgtgcattgtccct 931013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 15106864 - 15106977
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||||||||||  |||||| ||||||  || ||||||| ||||||||||||||||     
T  15106864 tcaagtagtttagtggttagagaaatttattttaaagatgaataagtggggtgtccggggttcgaaccccgacctctgcacaaattgtgcattatccctt 15106963  T
Q  118 actaaatgagttaa 131  Q
    || |||| ||||||    
T  15106964 accaaataagttaa 15106977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 20962287 - 20962356
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaatttt 416  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||    
T  20962287 gtgtttgttttaagtttatcaaatttattcataggaataacattccttggaacataaagatggaaatttt 20962356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 1572229 - 1572130
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||| |||||| |||  |||||| |||||||||||||||||| | ||||||| ||||||    
T  1572229 atcaagtagtctagtggctagagaaattcacctttaagatgaataagtggggagtccggggttcgaaccccagcccctgcacaaaatgtgcataatccct 1572130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 26671702 - 26671603
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcat-ttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccc 115  Q
    |||||||||| ||| |||||||||||||||  |||||||||||||| ||||||||||| || ||| || | ||||||||||||| |||||||||||||||    
T  26671702 atcaagtagtctagtggctagagaaattcaccttttaagatgaataagtggggtgtct-ggattcgaaactcagcccctgcacaaattgtgcattatccc 26671604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 26943299 - 26943200
Alignment:
Q  17 atcaagtagtttagcggctagagaaattcat-ttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccc 115  Q
    |||||||||| ||| |||||||||||||||  |||||||||||||| ||||||||||| || ||| || | ||||||||||||| |||||||||||||||    
T  26943299 atcaagtagtctagtggctagagaaattcaccttttaagatgaataagtggggtgtct-ggattcgaaactcagcccctgcacaaattgtgcattatccc 26943201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 28429455 - 28429573
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattt-aagaaaaatatgttt 445  Q
    |||||||||| ||||||| |||||||||| |||  |||||||||||||| |||||||||||   |||||||||| || | |||| || ||||| ||||||    
T  28429455 gtgtttgtttcaagtttaccaaatttatttctagaaataacattccttgaaatataaagatgtgaattttattccaaagtatttaaaaaaaaagatgttt 28429554  T
Q  446 ggttacctttataatattc 464  Q
    ||||| | |||||||||||    
T  28429555 ggttaacattataatattc 28429573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 17077479 - 17077370
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| ||||||| |||||||  ||||||||||||| ||||||||||  |||||| || |||  |||||||||| ||||||||||||||||     
T  17077479 tcaagtagcctagtggctagataaattcacctttaagatgaataagtggggtgtccggggttcgaatcccgacccctgcacaaattgtgcattatccctt 17077380  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  17077379 accaaatgag 17077370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 27480738 - 27480854
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||| ||||||||||| ||||||||||  || |||||| ||| |||| |||||||||||   |||||||||  |||| |||||  ||||||||| |||    
T  27480738 gtgtttattttaagtttaccaaatttatttttaggaataatatttcttgaaatataaagatgagaattttatttcaaggtatttagaaaaaatatgcttg 27480837  T
Q  447 gttacctttataatatt 463  Q
    |||| ||||||||||||    
T  27480838 gttaactttataatatt 27480854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 468
Target Start/End: Complemental strand, 35603084 - 35602999
Alignment:
Q  381 gaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatattccaag 468  Q
    ||||||||||  ||||||||||||||||||||||||||||||| | |||||  ||||| ||||||||||| | || ||||||||||||    
T  35603084 gaataacattttttggaatataaagatagaaattttattctaaagtattta--aaaaaaatgtttggttaacattttaatattccaag 35602999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 17251541 - 17251659
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattta-agaaaaatatgttt 445  Q
    |||||||||| || |||| ||||||||||||||  ||||||||| |||||||||||| ||||| |||||| ||| |||| ||||| | ||||| ||||||    
T  17251541 gtgtttgtttcaaatttaccaaatttattcctac-aataacatttcttggaatataaggataggaatttttttccaaggtatttagataaaaagatgttt 17251639  T
Q  446 ggttacctttataatattcc 465  Q
    ||||| | || |||||||||    
T  17251640 ggttaacattttaatattcc 17251659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 354 - 425
Target Start/End: Complemental strand, 35348862 - 35348791
Alignment:
Q  354 ttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaagg 425  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||   ||||||||| |||||    
T  35348862 ttttaagtttatcaaatttattcttaagaataacattcattggaacataaagatgagaattttattttaagg 35348791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 464
Target Start/End: Complemental strand, 16721029 - 16720910
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaa---atatgtt 444  Q
    ||||||||| |||||||  ||||||||||||| ||||||||||| |||||||||||| ||   |||||||||| |||  |||||| ||||   |||||||    
T  16721029 tgtttgtttcaagtttactaaatttattcctaggaataacattcattggaatataaaaatgtgaattttattcaaagatatttaaaaaaatatatatgtt 16720930  T
Q  445 tggttacctttataatattc 464  Q
    || ||| | |||||||||||    
T  16720929 tgattatcattataatattc 16720910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 5039798 - 5039677
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||| ||| ||||||||||||| |  || |||||||||| ||||||||||    |||| |||||| |||| |||||||||||| |||||| |||     
T  5039798 tcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccgaagttcgaaccccggcccttgcacatattgtacattat-cctt 5039700  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||||||| ||| ||||    
T  5039699 accaaatgagttaagctcatggg 5039677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 36703665 - 36703719
Alignment:
Q  411 aattttattctaaggaatttaagaaaaatatgtttggttacctttataatattcc 465  Q
    |||||||||| || ||||||| |||||||||||||||||| ||||||||||||||    
T  36703665 aattttattccaaagaatttaggaaaaatatgtttggttagctttataatattcc 36703719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 5263287 - 5263178
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || ||||||||||  || ||||||| |||||| |||  || ||||| ||||||||||||||||||| |     
T  5263287 tcaagtagcctagtggctagagaaattcagcttaaagatgaataaatgtggtgtctcgggttcgaacatcaccccctacacatattgtgcattatccatt 5263188  T
Q  118 actaaatgag 127  Q
    || |||||||    
T  5263187 accaaatgag 5263178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 33545364 - 33545460
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccc 115  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| | ||||||||   ||||||||| ||  ||||||||||||||||||||||||||    
T  33545364 tcaagtagcctagtggctagagaaattcaccttaaagatgaataag-ggggtgtccgaggttcaaactccgacccctgcacatattgtgcattatccc 33545460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 419
Target Start/End: Complemental strand, 31583403 - 31583331
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttatt 419  Q
    ||||||||||||||||||  ||||||||| ||| ||||||||||| ||| || |||||||| ||||| |||||    
T  31583403 gtgtttgttttaagtttactaaatttatttctacgaataacattctttgaaacataaagatggaaatattatt 31583331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 464
Target Start/End: Complemental strand, 36978477 - 36978358
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaattt--aagaaaaatatgtt 444  Q
    |||||||||| |||||||| |||||||||  || ||||||||||| || ||||||||| ||   ||||||||| ||||| ||||  || ||||| |||||    
T  36978477 gtgtttgtttcaagtttattaaatttatttataggaataacattctttagaatataaatatgagaattttattttaaggtatttaaaaaaaaaacatgtt 36978378  T
Q  445 tggttacctttataatattc 464  Q
    | |||| | |||||||||||    
T  36978377 tagttagcattataatattc 36978358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 42209018 - 42208912
Alignment:
Q  34 ctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaac 133  Q
    |||||||||||||  || |||||||||| ||| ||||||  | |||| |||| | |||| ||||||||||||| ||||||||| |||||||||| ||| |    
T  42209018 ctagagaaattcaccttaaagatgaataagtgaggtgtccggagttcgaacctcggccc-tgcacatattgtgtattatcccttactaaatgagctaagc 42208920  T
Q  134 tcgtggga 141  Q
    || |||||    
T  42208919 tcatggga 42208912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 450
Target Start/End: Complemental strand, 43347238 - 43347135
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||   |||||||||| || ||||||||||  |||||||||||||||   || |||||||||||| |||||  ||||| | |||||    
T  43347238 gtgtttgtttcaagttttcgaaatttattcttaggaataacatttattggaatataaagatgagaagtttattctaaggtatttagaaaaaaaaagtttg 43347139  T
Q  447 gtta 450  Q
    ||||    
T  43347138 gtta 43347135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 34729589 - 34729492
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccct 116  Q
    |||||||||| ||||| ||||||||||||  || ||| |||||| ||||||||||  |||||| ||||||  |||||||| ||| | ||||||||||||    
T  34729589 tcaagtagttaagcggttagagaaattcaccttaaaggtgaataagtggggtgtc-cgggttcgaaccccgacccctgcatataatatgcattatccct 34729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 4395842 - 4395923
Alignment:
Q  32 ggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatc 113  Q
    |||||||||||||||  || ||||||||||  |||||||||  |||||| ||| || ||||||||||| ||| |||||||||    
T  4395842 ggctagagaaattcaccttaaagatgaataaatggggtgtcaggggttcgaactccggcccctgcacacattatgcattatc 4395923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 12375446 - 12375511
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||| |||||| |||||||||||||||||||||||||| | || ||||||| ||| ||| ||||    
T  12375446 gggttcgaaccccggcccctgcacatattgtgcattatccattaccaaatgagctaagctcatggg 12375511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 27079270 - 27079206
Alignment:
Q  381 gaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    ||||| ||||| || ||| |||||||| ||||||||||||||||| |||||| |||||||||||||    
T  27079270 gaatagcattcatttgaacataaagatggaaattttattctaaggtatttaa-aaaaatatgtttg 27079206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 87872 - 87798
Alignment:
Q  55 atgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagtt 129  Q
    |||||||| |||||||||| | |||| ||| ||  ||| |||| |||||||||||||||||| || |||||||||    
T  87872 atgaatagttggggtgtctggagttcgaactccgacccttgcatatattgtgcattatcccttaccaaatgagtt 87798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 420
Target Start/End: Original strand, 27901697 - 27901759
Alignment:
Q  358 aagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattc 420  Q
    |||||||  |||||||||| |||||| ||||||| || |||||||||||||  ||||||||||    
T  27901697 aagtttacaaaatttattcttaagaacaacattctttagaatataaagatatgaattttattc 27901759  T

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Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 18101952 - 18102005
Alignment:
Q  44 tcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    ||||||||||| |||||| ||||||||||| |||||| ||| || |||||||||    
T  18101952 tcatttttaaggtgaataagtggggtgtctggggttcgaactccggcccctgca 18102005  T

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Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 20962373 - 20962434
Alignment:
Q  402 aaagatagaaattttattctaaggaatttaagaaaaatatgtttggttacctttataatatt 463  Q
    |||||| | |||||||||| |||| |||||| ||||||||||||| ||| | ||||||||||    
T  20962373 aaagatgggaattttattccaaggcatttaaaaaaaatatgtttgcttaacattataatatt 20962434  T

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Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 42643852 - 42643889
Alignment:
Q  90 cccctgcacatattgtgcattatccctaactaaatgag 127  Q
    ||||||||||||||||||||||||||| || |||||||    
T  42643852 cccctgcacatattgtgcattatcccttaccaaatgag 42643889  T

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Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 462071 - 462015
Alignment:
Q  71 tctagggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgag 127  Q
    |||||||||| ||||| ||| ||| |||||||||||||||| |||| || |||||||    
T  462071 tctagggttcgaaccctagctcctacacatattgtgcattaccccttaccaaatgag 462015  T

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Target: scaffold0006 (Bit Score: 84; Significance: 1e-39; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 347 - 458
Target Start/End: Original strand, 201653 - 201764
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  201653 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattctaaggaatttaggaaaaatatgtttg 201752  T
Q  447 gttacctttata 458  Q
    |||| |||||||    
T  201753 gttagctttata 201764  T

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Target: scaffold0006; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 349 - 465
Target Start/End: Original strand, 143342 - 143459
Alignment:
Q  349 gtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat-agaaattttattctaaggaatttaagaaaaatatgtttgg 447  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||  |||| ||||   ||||||||||||||    
T  143342 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtatttggaaaaaatatgtttgg 143441  T
Q  448 ttacctttataatattcc 465  Q
    ||| ||||||||||||||    
T  143442 ttaactttataatattcc 143459  T

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Target: scaffold0006; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 119051 - 119110
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagat 407  Q
    |||||| |||||||||| ||||||||||| ||| |||||||||| |||||||||||||||    
T  119051 tgtttgctttaagtttaccaaatttattcttaaaaataacattcattggaatataaagat 119110  T

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Target: scaffold0189 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 29296 - 29178
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaagaaaaatatgtttg 446  Q
    |||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||| ||||||||||  |||||||||||||    
T  29296 gtgtttattttaagtttatcaaatttattcctatgaataacattttttggaatataaagataggaattttattccaaggaatttagaaaaaatatgtttg 29197  T
Q  447 gttacctttataatattcc 465  Q
    |||| ||||||||||||||    
T  29196 gttagctttataatattcc 29178  T

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Target: scaffold0702 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 347 - 468
Target Start/End: Complemental strand, 3909 - 3787
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaag-aaaaatatgttt 445  Q
    |||||||||| ||||  | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||| | ||||| ||||||    
T  3909 gtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtatttaggaaaaaaaatgttt 3810  T
Q  446 ggttacctttataatattccaag 468  Q
     |||| | |||||||||||||||    
T  3809 cgttaacattataatattccaag 3787  T

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Target: scaffold0662 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 4193 - 4315
Alignment:
Q  347 gtgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaaggaatttaag-aaaaatatgttt 445  Q
    |||||||||| ||||  | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||| | ||||| ||||||    
T  4193 gtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtatttaggaaaaaaaatgttt 4292  T
Q  446 ggttacctttataatattccaag 468  Q
     |||| | |||||||||||||||    
T  4293 cgttaacattataatattccaag 4315  T

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Target: scaffold0001 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 419830 - 419708
Alignment:
Q  18 tcaagtagtttagcggctagagaaattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgcacatattgtgcattatcccta 117  Q
    ||||||||  ||| |||||||||||||||  || |||||||||| ||||||||||  |||||| |||||| ||||||||||||||||| ||||||||||     
T  419830 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgttcattatccctt 419731  T
Q  118 actaaatgagttaaactcgtggg 140  Q
    || ||||||| ||| ||| ||||    
T  419730 accaaatgagctaagctcatggg 419708  T

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Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 23675 - 23601
Alignment:
Q  348 tgtttgttttaagtttatcaaatttattcctaagaataacattccttggaatataaagatagaaattttattctaa 423  Q
    ||||| ||||||||||| ||||||||||  ||||||||| ||| ||||||||||||| || | |||||||||||||    
T  23675 tgtttattttaagtttaccaaatttatttttaagaataatatttcttggaatataaaaat-ggaattttattctaa 23601  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 121833 - 121898
Alignment:
Q  75 gggttcaaaccccagcccctgcacatattgtgcattatccctaactaaatgagttaaactcgtggg 140  Q
    |||||| |||||| | |||||||||||||||||||||||||  || ||||||| ||| ||| ||||    
T  121833 gggttcgaaccccggtccctgcacatattgtgcattatcccctaccaaatgagctaagctcatggg 121898  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 17931 - 17987
Alignment:
Q  41 aattcatttttaagatgaataggtggggtgtctagggttcaaaccccagcccctgca 97  Q
    |||||| ||||||  |||||| |||| |||||| |||||| ||||||||||||||||    
T  17931 aattcaattttaaagtgaataagtggagtgtctggggttcgaaccccagcccctgca 17987  T

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