View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3857_low_6 (Length: 661)

Name: NF3857_low_6
Description: NF3857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3857_low_6
NF3857_low_6
[»] chr5 (55 HSPs)
chr5 (15-584)||(33584771-33585326)
chr5 (141-368)||(33822423-33822650)
chr5 (141-375)||(42329466-42329700)
chr5 (141-322)||(27652241-27652422)
chr5 (142-368)||(29653435-29653661)
chr5 (146-375)||(793531-793760)
chr5 (141-304)||(36296054-36296217)
chr5 (201-375)||(34171163-34171334)
chr5 (142-355)||(4833559-4833767)
chr5 (128-375)||(36660426-36660669)
chr5 (142-318)||(32962931-32963106)
chr5 (141-375)||(166571-166803)
chr5 (131-319)||(4751442-4751628)
chr5 (141-368)||(36783361-36783586)
chr5 (131-319)||(4742178-4742364)
chr5 (141-222)||(21375572-21375653)
chr5 (248-372)||(28640084-28640206)
chr5 (248-375)||(27810345-27810470)
chr5 (141-222)||(34972572-34972653)
chr5 (208-319)||(29044774-29044884)
chr5 (248-375)||(38982174-38982299)
chr5 (141-222)||(42103985-42104066)
chr5 (131-222)||(39730096-39730187)
chr5 (146-260)||(34919847-34919961)
chr5 (141-222)||(26660904-26660985)
chr5 (141-222)||(26932497-26932578)
chr5 (141-355)||(39059825-39060031)
chr5 (141-222)||(42661862-42661943)
chr5 (259-375)||(4371362-4371476)
chr5 (146-237)||(15567048-15567139)
chr5 (149-221)||(14620424-14620496)
chr5 (248-368)||(32690760-32690878)
chr5 (604-644)||(33585347-33585387)
chr5 (142-222)||(42977996-42978076)
chr5 (131-222)||(2729698-2729789)
chr5 (217-371)||(15400174-15400327)
chr5 (141-284)||(43257783-43257925)
chr5 (258-375)||(13066712-13066827)
chr5 (142-222)||(8336330-8336410)
chr5 (142-222)||(27600544-27600624)
chr5 (131-298)||(12167522-12167688)
chr5 (233-375)||(31557355-31557489)
chr5 (143-222)||(34445952-34446030)
chr5 (331-375)||(4011746-4011790)
chr5 (331-375)||(31889741-31889785)
chr5 (332-375)||(12167693-12167736)
chr5 (231-309)||(1513042-1513120)
chr5 (141-183)||(24436462-24436504)
chr5 (141-222)||(29807236-29807317)
chr5 (146-222)||(3305936-3306012)
chr5 (331-375)||(7388291-7388335)
chr5 (331-375)||(7731703-7731747)
chr5 (146-222)||(14006042-14006118)
chr5 (331-375)||(14980149-14980193)
chr5 (331-375)||(28316712-28316756)
[»] chr3 (72 HSPs)
chr3 (141-375)||(20512416-20512651)
chr3 (131-368)||(25722371-25722608)
chr3 (141-375)||(54261414-54261648)
chr3 (131-375)||(54933115-54933359)
chr3 (141-375)||(2988530-2988763)
chr3 (131-354)||(36541511-36541734)
chr3 (141-375)||(51381720-51381957)
chr3 (146-375)||(32303830-32304059)
chr3 (141-368)||(43687803-43688033)
chr3 (146-375)||(43169333-43169562)
chr3 (128-319)||(44645393-44645585)
chr3 (142-372)||(42006983-42007212)
chr3 (142-274)||(52201847-52201979)
chr3 (130-375)||(53560664-53560908)
chr3 (141-354)||(647514-647725)
chr3 (217-375)||(37225593-37225749)
chr3 (141-375)||(43580474-43580710)
chr3 (217-375)||(83295-83450)
chr3 (217-375)||(46363008-46363165)
chr3 (133-263)||(10351927-10352057)
chr3 (217-375)||(44854314-44854470)
chr3 (248-375)||(3000751-3000877)
chr3 (248-375)||(15514754-15514880)
chr3 (130-222)||(38363941-38364033)
chr3 (142-222)||(45213642-45213722)
chr3 (248-375)||(4391903-4392028)
chr3 (248-354)||(38457480-38457584)
chr3 (128-222)||(47138115-47138209)
chr3 (131-375)||(49470788-49471015)
chr3 (142-298)||(27483116-27483270)
chr3 (137-222)||(36729687-36729772)
chr3 (141-222)||(47895263-47895344)
chr3 (142-222)||(45391878-45391958)
chr3 (251-375)||(50420258-50420379)
chr3 (141-222)||(33193950-33194031)
chr3 (141-222)||(51398160-51398241)
chr3 (141-284)||(2567934-2568077)
chr3 (286-375)||(22730924-22731013)
chr3 (248-375)||(27027732-27027857)
chr3 (142-221)||(31853482-31853561)
chr3 (217-375)||(26965506-26965653)
chr3 (248-366)||(35099395-35099511)
chr3 (141-222)||(2458158-2458239)
chr3 (149-222)||(23525243-23525316)
chr3 (138-222)||(3152723-3152807)
chr3 (331-375)||(19552539-19552583)
chr3 (233-372)||(1340943-1341071)
chr3 (217-375)||(34059875-34060020)
chr3 (248-375)||(36771605-36771721)
chr3 (131-222)||(41850531-41850622)
chr3 (141-222)||(45566949-45567027)
chr3 (165-222)||(30426266-30426323)
chr3 (217-297)||(35239438-35239516)
chr3 (145-270)||(38165587-38165712)
chr3 (331-372)||(45095555-45095596)
chr3 (141-222)||(53200600-53200681)
chr3 (331-375)||(2568113-2568157)
chr3 (141-284)||(44648332-44648476)
chr3 (138-221)||(51482086-51482170)
chr3 (198-237)||(6937895-6937934)
chr3 (248-322)||(27039379-27039451)
chr3 (128-183)||(31290883-31290938)
chr3 (332-375)||(44648512-44648555)
chr3 (251-319)||(5244640-5244706)
chr3 (160-221)||(33024238-33024299)
chr3 (142-179)||(42940171-42940208)
chr3 (242-298)||(43599853-43599907)
chr3 (141-222)||(44676371-44676452)
chr3 (331-375)||(790095-790139)
chr3 (141-221)||(11393696-11393776)
chr3 (331-375)||(25061703-25061747)
chr3 (131-175)||(43736783-43736827)
[»] chr7 (65 HSPs)
chr7 (141-375)||(32345756-32345990)
chr7 (131-375)||(36446981-36447225)
chr7 (141-375)||(19906413-19906645)
chr7 (141-354)||(39117410-39117622)
chr7 (131-375)||(26963478-26963722)
chr7 (141-375)||(6521817-6522050)
chr7 (138-375)||(31416669-31416906)
chr7 (191-355)||(10684801-10684965)
chr7 (191-375)||(30514972-30515156)
chr7 (160-368)||(42043926-42044127)
chr7 (208-375)||(36836058-36836224)
chr7 (167-297)||(29001512-29001642)
chr7 (217-375)||(41905933-41906088)
chr7 (248-375)||(40298846-40298971)
chr7 (141-222)||(37815874-37815955)
chr7 (141-375)||(42259471-42259702)
chr7 (141-221)||(45933509-45933589)
chr7 (131-222)||(23155372-23155463)
chr7 (233-359)||(34002147-34002271)
chr7 (232-375)||(3680936-3681077)
chr7 (237-372)||(30833112-30833245)
chr7 (217-375)||(1103483-1103639)
chr7 (128-222)||(42879841-42879935)
chr7 (141-222)||(1742141-1742222)
chr7 (141-222)||(44453283-44453364)
chr7 (248-368)||(5723009-5723126)
chr7 (257-372)||(19920310-19920423)
chr7 (131-222)||(35777969-35778060)
chr7 (128-222)||(13405034-13405128)
chr7 (141-222)||(23935571-23935652)
chr7 (141-222)||(29530855-29530936)
chr7 (130-226)||(27947410-27947506)
chr7 (229-284)||(19277055-19277110)
chr7 (128-235)||(48684860-48684967)
chr7 (141-219)||(16564723-16564801)
chr7 (141-219)||(16600861-16600939)
chr7 (233-375)||(17869236-17869376)
chr7 (146-240)||(19276543-19276636)
chr7 (131-237)||(36915504-36915610)
chr7 (217-311)||(34733374-34733464)
chr7 (146-298)||(42121618-42121768)
chr7 (130-222)||(7795152-7795244)
chr7 (131-222)||(10599513-10599604)
chr7 (131-222)||(27935917-27936008)
chr7 (217-375)||(28044139-28044286)
chr7 (141-219)||(31418433-31418511)
chr7 (138-222)||(22298146-22298235)
chr7 (242-375)||(18733452-18733585)
chr7 (248-319)||(33845439-33845508)
chr7 (146-222)||(41137878-41137954)
chr7 (161-312)||(47272213-47272362)
chr7 (141-220)||(8334214-8334293)
chr7 (276-368)||(19288403-19288495)
chr7 (248-310)||(48838714-48838774)
chr7 (331-372)||(40805026-40805067)
chr7 (141-222)||(45948550-45948631)
chr7 (331-375)||(18886668-18886712)
chr7 (331-375)||(22597229-22597273)
chr7 (248-298)||(22627383-22627431)
chr7 (128-183)||(40339647-40339702)
chr7 (129-183)||(5723175-5723229)
chr7 (331-375)||(36447712-36447756)
chr7 (131-183)||(40207299-40207351)
chr7 (331-375)||(43813455-43813499)
chr7 (331-375)||(48838776-48838820)
[»] chr4 (75 HSPs)
chr4 (141-375)||(34124290-34124524)
chr4 (141-375)||(47321139-47321374)
chr4 (128-353)||(45889580-45889805)
chr4 (141-375)||(31941553-31941784)
chr4 (141-375)||(24259606-24259840)
chr4 (131-375)||(19282323-19282567)
chr4 (131-368)||(28116247-28116484)
chr4 (131-375)||(17499630-17499874)
chr4 (131-375)||(6462004-6462253)
chr4 (141-375)||(51434180-51434414)
chr4 (131-373)||(55126494-55126736)
chr4 (141-284)||(54233902-54234045)
chr4 (141-317)||(4408100-4408276)
chr4 (217-375)||(19849079-19849235)
chr4 (142-375)||(30022063-30022293)
chr4 (141-322)||(34096064-34096243)
chr4 (137-222)||(27653824-27653909)
chr4 (141-222)||(52957716-52957797)
chr4 (252-375)||(22212336-22212457)
chr4 (248-375)||(54091953-54092078)
chr4 (217-367)||(44855245-44855395)
chr4 (248-372)||(31987302-31987424)
chr4 (248-375)||(6510113-6510238)
chr4 (131-221)||(54042098-54042189)
chr4 (137-375)||(55548139-55548380)
chr4 (248-359)||(30492739-30492849)
chr4 (138-284)||(36805373-36805518)
chr4 (141-222)||(1819712-1819793)
chr4 (141-222)||(29519451-29519532)
chr4 (141-222)||(42605722-42605803)
chr4 (141-222)||(52847980-52848061)
chr4 (248-372)||(29289923-29290044)
chr4 (160-291)||(34534035-34534166)
chr4 (141-221)||(39984968-39985048)
chr4 (131-222)||(2728314-2728405)
chr4 (235-375)||(35928486-35928622)
chr4 (217-375)||(37445655-37445811)
chr4 (141-222)||(37654560-37654641)
chr4 (141-222)||(38991689-38991770)
chr4 (141-222)||(40345273-40345354)
chr4 (130-222)||(2493252-2493344)
chr4 (231-372)||(45520473-45520611)
chr4 (217-319)||(42672440-42672540)
chr4 (131-222)||(53814413-53814504)
chr4 (248-368)||(11835109-11835225)
chr4 (217-298)||(34360077-34360156)
chr4 (141-222)||(18430139-18430220)
chr4 (141-222)||(24941030-24941111)
chr4 (131-222)||(20448189-20448278)
chr4 (142-222)||(44571792-44571872)
chr4 (142-226)||(49089609-49089693)
chr4 (131-222)||(45043504-45043595)
chr4 (131-222)||(56373491-56373582)
chr4 (128-206)||(34316386-34316464)
chr4 (141-183)||(56556204-56556246)
chr4 (267-323)||(17317893-17317947)
chr4 (141-222)||(19878798-19878879)
chr4 (286-375)||(29840070-29840160)
chr4 (141-222)||(40010798-40010879)
chr4 (331-375)||(6232147-6232191)
chr4 (331-375)||(21045151-21045195)
chr4 (286-359)||(38761892-38761964)
chr4 (331-375)||(50072276-50072320)
chr4 (331-375)||(52732594-52732638)
chr4 (146-221)||(28734749-28734824)
chr4 (129-183)||(22212526-22212580)
chr4 (160-222)||(29370753-29370815)
chr4 (218-284)||(39671108-39671174)
chr4 (331-368)||(45903518-45903555)
chr4 (141-222)||(49080403-49080484)
chr4 (331-375)||(1868211-1868255)
chr4 (331-375)||(15501258-15501302)
chr4 (331-375)||(38692409-38692453)
chr4 (141-221)||(50623235-50623315)
chr4 (331-375)||(56556366-56556410)
[»] chr8 (49 HSPs)
chr8 (141-373)||(34461504-34461737)
chr8 (142-375)||(14541669-14541900)
chr8 (142-372)||(18673022-18673251)
chr8 (141-297)||(8471333-8471489)
chr8 (141-368)||(34168134-34168353)
chr8 (141-319)||(27416553-27416733)
chr8 (141-375)||(9022393-9022626)
chr8 (162-306)||(13109054-13109198)
chr8 (218-375)||(7612496-7612651)
chr8 (141-368)||(32326647-32326873)
chr8 (248-372)||(8382507-8382629)
chr8 (231-374)||(30788934-30789075)
chr8 (191-375)||(35052469-35052652)
chr8 (248-373)||(3095533-3095656)
chr8 (141-375)||(36915365-36915595)
chr8 (248-352)||(32661326-32661428)
chr8 (131-222)||(4760471-4760562)
chr8 (233-375)||(27109835-27109975)
chr8 (141-222)||(9880423-9880504)
chr8 (249-375)||(11257540-11257662)
chr8 (233-375)||(22601134-22601273)
chr8 (146-220)||(4989630-4989704)
chr8 (141-222)||(39463407-39463488)
chr8 (141-237)||(11168818-11168914)
chr8 (141-222)||(9304556-9304637)
chr8 (286-375)||(5588539-5588628)
chr8 (260-375)||(42946120-42946233)
chr8 (141-283)||(38328977-38329118)
chr8 (141-222)||(5790566-5790649)
chr8 (158-222)||(17921107-17921171)
chr8 (138-222)||(39698585-39698669)
chr8 (248-315)||(43938179-43938244)
chr8 (128-222)||(43084536-43084630)
chr8 (141-297)||(6839283-6839437)
chr8 (331-375)||(1774170-1774214)
chr8 (331-375)||(2803348-2803392)
chr8 (131-183)||(4530055-4530107)
chr8 (331-375)||(29931342-29931386)
chr8 (331-375)||(38329140-38329184)
chr8 (331-375)||(45187395-45187439)
chr8 (332-375)||(3203325-3203368)
chr8 (131-222)||(31899160-31899251)
chr8 (142-184)||(8106811-8106853)
chr8 (149-183)||(45187226-45187260)
chr8 (130-199)||(8382398-8382467)
chr8 (331-368)||(16208955-16208992)
chr8 (145-226)||(31693545-31693626)
chr8 (331-408)||(32061534-32061611)
chr8 (331-359)||(8107270-8107298)
[»] chr2 (50 HSPs)
chr2 (128-372)||(4566030-4566274)
chr2 (128-375)||(10580765-10581012)
chr2 (141-375)||(43388579-43388811)
chr2 (141-375)||(25332569-25332802)
chr2 (145-372)||(39866596-39866824)
chr2 (141-375)||(33093366-33093599)
chr2 (141-297)||(14698064-14698220)
chr2 (190-375)||(2459771-2459956)
chr2 (195-375)||(41984416-41984597)
chr2 (142-375)||(775807-776039)
chr2 (141-373)||(7743401-7743631)
chr2 (142-358)||(36360298-36360510)
chr2 (146-237)||(38809833-38809924)
chr2 (217-368)||(4840725-4840874)
chr2 (131-222)||(25383397-25383488)
chr2 (217-375)||(24775187-24775343)
chr2 (141-222)||(4133172-4133253)
chr2 (141-297)||(34225826-34225980)
chr2 (141-221)||(16807439-16807519)
chr2 (141-221)||(16846720-16846800)
chr2 (131-222)||(29808963-29809054)
chr2 (141-222)||(441153-441234)
chr2 (248-349)||(37106886-37106985)
chr2 (217-354)||(43460792-43460927)
chr2 (138-222)||(29396599-29396683)
chr2 (216-359)||(16316723-16316864)
chr2 (129-274)||(14378158-14378303)
chr2 (142-222)||(42743178-42743256)
chr2 (209-375)||(43344213-43344375)
chr2 (130-222)||(8774202-8774294)
chr2 (217-368)||(1298778-1298927)
chr2 (248-375)||(1360175-1360300)
chr2 (131-222)||(42753897-42753988)
chr2 (248-375)||(4536572-4536694)
chr2 (130-222)||(8789341-8789433)
chr2 (142-222)||(12393842-12393922)
chr2 (146-222)||(38926756-38926832)
chr2 (141-222)||(12342243-12342324)
chr2 (331-372)||(14378334-14378375)
chr2 (141-222)||(30855255-30855336)
chr2 (141-222)||(32227933-32228014)
chr2 (334-375)||(45372645-45372686)
chr2 (331-375)||(34225771-34225815)
chr2 (128-199)||(44228638-44228710)
chr2 (331-375)||(45148062-45148106)
chr2 (248-375)||(18374793-18374918)
chr2 (141-206)||(36106325-36106390)
chr2 (331-372)||(42969900-42969941)
chr2 (142-226)||(13562140-13562223)
chr2 (331-375)||(29795300-29795344)
[»] scaffold0047 (1 HSPs)
scaffold0047 (141-375)||(70375-70609)
[»] chr1 (80 HSPs)
chr1 (141-319)||(28200144-28200322)
chr1 (141-368)||(44582700-44582927)
chr1 (141-375)||(22664937-22665167)
chr1 (141-319)||(254833-255011)
chr1 (141-375)||(26252116-26252350)
chr1 (146-373)||(42650176-42650402)
chr1 (141-375)||(2459006-2459236)
chr1 (146-319)||(672209-672379)
chr1 (141-375)||(5854146-5854380)
chr1 (141-297)||(50591240-50591396)
chr1 (142-284)||(49894869-49895011)
chr1 (146-374)||(11134387-11134614)
chr1 (160-355)||(44024563-44024758)
chr1 (128-359)||(28751317-28751546)
chr1 (192-375)||(17806348-17806529)
chr1 (131-300)||(9552269-9552436)
chr1 (217-375)||(11650056-11650212)
chr1 (237-375)||(12002244-12002380)
chr1 (248-370)||(2245789-2245911)
chr1 (141-222)||(15823184-15823265)
chr1 (141-358)||(17919743-17919957)
chr1 (146-297)||(9333160-9333305)
chr1 (146-297)||(9356933-9357078)
chr1 (218-297)||(38132189-38132268)
chr1 (131-284)||(84430-84583)
chr1 (231-375)||(5317590-5317731)
chr1 (146-222)||(49468636-49468712)
chr1 (146-375)||(6332164-6332392)
chr1 (233-374)||(1428865-1429004)
chr1 (234-375)||(15698766-15698905)
chr1 (141-297)||(24040946-24041100)
chr1 (141-297)||(43755104-43755257)
chr1 (237-368)||(40719020-40719149)
chr1 (131-222)||(32806848-32806939)
chr1 (141-222)||(15573763-15573844)
chr1 (130-195)||(30686811-30686876)
chr1 (141-222)||(48009160-48009241)
chr1 (142-226)||(38530760-38530844)
chr1 (248-368)||(45377179-45377297)
chr1 (131-222)||(31491680-31491771)
chr1 (142-229)||(40717283-40717370)
chr1 (128-274)||(45749408-45749554)
chr1 (141-222)||(25151960-25152041)
chr1 (248-308)||(50349892-50349950)
chr1 (286-375)||(43738319-43738408)
chr1 (130-222)||(52125045-52125137)
chr1 (231-359)||(52403490-52403616)
chr1 (131-222)||(5463725-5463816)
chr1 (131-222)||(10842930-10843021)
chr1 (131-222)||(35847846-35847937)
chr1 (217-284)||(37437402-37437469)
chr1 (233-319)||(43929739-43929822)
chr1 (131-222)||(49426329-49426420)
chr1 (331-408)||(84604-84681)
chr1 (141-222)||(43358134-43358215)
chr1 (331-368)||(43755058-43755095)
chr1 (141-222)||(48025174-48025255)
chr1 (331-375)||(24041111-24041155)
chr1 (331-375)||(26582923-26582967)
chr1 (231-375)||(44583770-44583912)
chr1 (141-193)||(48319927-48319979)
chr1 (140-183)||(17805765-17805808)
chr1 (128-183)||(48259772-48259827)
chr1 (141-175)||(6377208-6377242)
chr1 (141-183)||(13408256-13408298)
chr1 (141-222)||(9915594-9915675)
chr1 (138-183)||(15646992-15647037)
chr1 (331-368)||(40061007-40061044)
chr1 (331-368)||(50158417-50158454)
chr1 (248-318)||(6377306-6377373)
chr1 (331-375)||(9552440-9552484)
chr1 (248-284)||(10690984-10691020)
chr1 (131-183)||(12851920-12851972)
chr1 (331-375)||(38132278-38132322)
chr1 (128-284)||(43105511-43105667)
chr1 (332-372)||(43105692-43105732)
chr1 (146-222)||(46286743-46286819)
chr1 (331-375)||(48259964-48260008)
chr1 (331-375)||(48320100-48320144)
chr1 (138-222)||(50094380-50094464)
[»] chr6 (33 HSPs)
chr6 (142-375)||(17345061-17345290)
chr6 (191-375)||(34576542-34576726)
chr6 (141-318)||(25932684-25932861)
chr6 (131-375)||(6143082-6143326)
chr6 (131-375)||(6140598-6140841)
chr6 (149-354)||(26189527-26189733)
chr6 (143-265)||(6992509-6992631)
chr6 (217-375)||(12828679-12828835)
chr6 (172-375)||(29927205-29927407)
chr6 (237-375)||(31275659-31275796)
chr6 (251-375)||(4123888-4124009)
chr6 (251-375)||(30627089-30627211)
chr6 (233-375)||(29915539-29915680)
chr6 (288-375)||(4132042-4132129)
chr6 (131-221)||(24163625-24163716)
chr6 (218-375)||(10494760-10494916)
chr6 (248-359)||(11785132-11785240)
chr6 (257-375)||(32258720-32258838)
chr6 (141-222)||(19675128-19675209)
chr6 (131-222)||(1135075-1135166)
chr6 (217-368)||(26669096-26669245)
chr6 (145-222)||(10520316-10520393)
chr6 (141-222)||(23259247-23259328)
chr6 (146-222)||(24555854-24555930)
chr6 (248-375)||(8052343-8052467)
chr6 (248-375)||(34439438-34439567)
chr6 (331-375)||(1924774-1924818)
chr6 (331-368)||(3015921-3015958)
chr6 (146-183)||(9940836-9940873)
chr6 (141-206)||(29713328-29713393)
chr6 (141-201)||(234196-234256)
chr6 (331-375)||(30626867-30626911)
chr6 (141-213)||(34513580-34513652)
[»] scaffold0003 (1 HSPs)
scaffold0003 (146-375)||(321724-321953)
[»] scaffold0110 (1 HSPs)
scaffold0110 (131-222)||(24652-24743)
[»] scaffold0886 (1 HSPs)
scaffold0886 (250-375)||(4140-4263)
[»] scaffold0238 (1 HSPs)
scaffold0238 (250-370)||(16070-16188)
[»] scaffold0072 (1 HSPs)
scaffold0072 (128-284)||(11991-12146)
[»] scaffold0048 (1 HSPs)
scaffold0048 (146-222)||(62783-62859)
[»] scaffold0078 (1 HSPs)
scaffold0078 (142-219)||(1371-1448)
[»] scaffold0015 (1 HSPs)
scaffold0015 (141-222)||(21003-21084)
[»] scaffold0189 (1 HSPs)
scaffold0189 (286-375)||(13124-13213)
[»] scaffold0519 (1 HSPs)
scaffold0519 (251-375)||(7732-7852)
[»] scaffold0119 (1 HSPs)
scaffold0119 (217-368)||(1548-1697)
[»] scaffold0007 (1 HSPs)
scaffold0007 (248-322)||(158151-158223)
[»] scaffold0194 (1 HSPs)
scaffold0194 (257-375)||(8156-8274)


Alignment Details
Target: chr5 (Bit Score: 393; Significance: 0; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 15 - 584
Target Start/End: Original strand, 33584771 - 33585326
Alignment:
Q  15 catcatcgttcattaattccccatcacacaccttattactactattcaatactcactttcgccttatttcttgacttcattatattggcgatgcgtacaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  33584771 catcatcgttcattaattccccatcacacaccttattactattattcaatactcactttcaccttatttcttgacttcattatattggcgatgcatacaa 33584870  T
Q  115 ttactactaaacctattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagc 214  Q
    ||||| |||||| ||||||||||||||||||||||| ||| |||||||| |||||||  ||| |||||| |||||||||||||||||||||| ||||| |    
T  33584871 ttactgctaaacttattactctatctgttttaaaataagtgtcgctttaaccaattg--cacggattaagaaacggaataaaatagtcaaatgtcataac 33584968  T
Q  215 aattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  33584969 aattttactaaaataaccttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtatttattgaaggtaa 33585068  T
Q  315 agttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaannnnnnnnatctaaagtgacactcaatttaaaattcaat 414  Q
    ||||| |||       |||||||||||||||||||||||||||||||| ||||||||||||        ||||||||||||||            ||| |    
T  33585069 agttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttaaaacaattttttttatctaaagtgacac------------tcatt 33585156  T
Q  415 ttgaaacggatgaattactattcaatattcactttaaccgtactcttcctcattaattctagttcctttaattatgcaaagatatttcacattactattc 514  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33585157 ttgaaacggatggattactattcaatattcactttaaccgtactcttcctcattaattctagttcctttaattatgcaaagatatttcacattactattc 33585256  T
Q  515 ttcattagttcccaatcacacaccttgatttgttgcctttgttaaccctaaaaaaatcggatttaaaacg 584  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33585257 ttcattagttccccatcacacaccttgatttcttgcctttgttaaccctaaaaaaatcggatttaaaacg 33585326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 141 - 368
Target Start/End: Original strand, 33822423 - 33822650
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||| ||||| |||| |||||||||||||||||||  || | |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  33822423 gtttcaaaatgaatatcgttttaaccaattgcacacagattaattaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttta 33822522  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | |||||||||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||       ||||||||||    
T  33822523 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttgaaagaacaaaattaaagttgt 33822622  T
Q  341 attgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||||||||||||| || |||||    
T  33822623 attgaaaatgtaaagtgacattcatttt 33822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 42329466 - 42329700
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| |||||||||||||||||| ||||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  42329466 gtttcaaaatgagtatcgctttaaccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataaccttacttta 42329565  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| |||||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||| | |||||||||| |||       ||||||||||    
T  42329566 taagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaagaaaaaaattaaagttgt 42329665  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||||||||| || ||||| ||||||    
T  42329666 attggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 141 - 322
Target Start/End: Original strand, 27652241 - 27652422
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  27652241 gttttaaaatgagtgtcgctttaggcaattacacacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataaccttacttta 27652340  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaa 322  Q
     | ||| |||||||| ||||||||| |||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||    
T  27652341 taagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagttggattatttattgagggtaaagttgaaa 27652422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 142 - 368
Target Start/End: Original strand, 29653435 - 29653661
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| ||| |||||||||||||| || ||||||| || | |||||||||||||||| |||||||||||||||||||||||| ||||||||     
T  29653435 ttttaaaatgagtgtcgttttagccaattgcatacggattaaagaatgaaataaaatagtcaaatgtcatagcaattttactaaaataacgttactttat 29653534  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgta 341  Q
    | |||||||||||||||||||||| |||  ||| ||||||||| ||||||||| ||||||||||||| |||||||||| |||       |||||||||||    
T  29653535 aagaacaagacaaacttaaagttgcattagaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgta 29653634  T
Q  342 ttgaaaatgtaaagtgacgtttatttt 368  Q
    ||| ||||||||| |||| || |||||    
T  29653635 ttggaaatgtaaaatgacattcatttt 29653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 146 - 375
Target Start/End: Original strand, 793531 - 793760
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    |||||||||  || |||||||||||||||||| |||||  || |||||||| ||||| ||| ||||||||||||||||||||||||||||||||| | ||    
T  793531 aaaatgagtgccgttttagccaattgcacacaaattaaggaatggaataaagtagtccaatgtcatagcaattttactaaaataaccttactttataaga 793630  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattga 345  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||||  |||||||||||| |||| ||||| |||       ||||||||||||||     
T  793631 acaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagagttggaagaaaaaaattaaagttgtattgg 793730  T
Q  346 aaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| || ||||| ||||||    
T  793731 aaatgtaaagtgacattcattttgaaacaa 793760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 141 - 304
Target Start/End: Original strand, 36296054 - 36296217
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| || | ||||||||| |||||| | |||||||||||||||||||||||||| ||||    
T  36296054 gttttaaaatgagtgtcgctttagccaattgcacatggattaaagaatgaaataaaataatcaaatgtaatagcaattttactaaaataaccttaattta 36296153  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtattta 304  Q
     | |||||||||||||||||||||| |||||||| ||||||||  |||||||||||||| ||||    
T  36296154 taggaacaagacaaacttaaagttgcattgaaaattgtgtgagcgagaaaagttggagtgttta 36296217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 34171334 - 34171163
Alignment:
Q  201 tcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagta 300  Q
    |||||| |||||| |||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| | ||||||  ||||||||| |||||    
T  34171334 tcaaatgtcatagaaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattctgtgag--agaaaagtttgagta 34171237  T
Q  301 tttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| ||        ||||||||||||||||||||||||||||| || ||||||||||||    
T  34171236 tttattgaaggtaaagttggaa-aaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 142 - 355
Target Start/End: Original strand, 4833559 - 4833767
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| |||||||||||||||||||| |  ||||  || | |||||| |||| |||| ||||| ||||||||||||||||||||||||| |     
T  4833559 ttttaaaatgagtgtcgctttagccaattgcacatatgttaaggaatgaaataaagtagttaaatgtcataacaattttactaaaataaccttacttaaa 4833658  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgta 341  Q
    |     |||||||||||||||||| |||||||| ||||||| | ||||||||| ||||||||||||| |||||||||| |||       ||||||||| |    
T  4833659 a-----aagacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgca 4833753  T
Q  342 ttgaaaatgtaaag 355  Q
    ||||||||||||||    
T  4833754 ttgaaaatgtaaag 4833767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 128 - 375
Target Start/End: Complemental strand, 36660669 - 36660426
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    ||||||||  ||||||| ||||||||| |||||||||| |||||||||||||||||  || | ||| ||||| |||     |||| || |||||||||||    
T  36660669 tattactccctctgtttcaaaatgagtgtcgctttagctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaa 36660570  T
Q  228 taaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnn 327  Q
    |  |||||||||| | ||| |||||||||||||||||||||  |||| |||    || ||||||| ||||||||||||||| |||||||||| |||        
T  36660569 tgtccttactttataagaaaaagacaaacttaaagttgtataaaaaattgt----gagagaaaagctggagtatttattgagggtaaagttggaagaaaa 36660474  T
Q  328 nnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
       ||||||||||||||||||||||||||||| || ||||| ||||||    
T  36660473 aaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36660426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 318
Target Start/End: Original strand, 32962931 - 32963106
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| |||||||| | |||||||||||||||||  || | |||| | ||||||| | |||||||| ||||| ||||||||| ||||||||     
T  32962931 ttttaaaatgagtgtcgctttaactaattgcacacagattaattaatgaaatagagtagtcaattgtcatagcagttttattaaaataactttactttat 32963030  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagtt 318  Q
    | ||| |||||||||||||| ||| |||| ||| ||| ||| | ||||||||| ||||||||||||| |||||||||    
T  32963031 aagaaaaagacaaacttaaa-ttgcattggaaattgtttgaaaaagaaaagttagagtatttattgagggtaaagtt 32963106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 166571 - 166803
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||| |||||||||||||||||||||||  || | ||| ||||| |||      ||| || |||||||||| |  ||||   |||    
T  166571 gtttcaaaatgagtgtcgcgttagccaattgcacacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgtatta 166670  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     ||||| |||||||||||||||||| |||||||| ||||||||  | ||||||||||||||||||||| |||||||||| |||       ||||||||||    
T  166671 tatgaaaaagacaaacttaaagttgcattgaaaattgtgtgag--aaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 166768  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||||||||| || ||||| ||||||    
T  166769 attggaaatgtaaagtgacattcattttgaaacaa 166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 131 - 319
Target Start/End: Original strand, 4751442 - 4751628
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||| |||||  || | ||| ||||| |||     |||| || ||||||||||  |     
T  4751442 tactctttctgttttaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaac 4751541  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
    ||||  |||| ||||| || ||||||||||||||| |||||||| ||||||||  | ||||||||||||||||||||| ||||||||||    
T  4751542 ccttgttttatatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgag--aaaaaagttggagtatttattgagggtaaagttg 4751628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 141 - 368
Target Start/End: Complemental strand, 36783586 - 36783361
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| |||||||||||||||||||||||||||||||||||||| | | | ||| ||||| |||     |||| || |||||||||| |  ||||||||      
T  36783586 gtttcaaaatgagtatcgctttagccaattgcacacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgcccttacttgt 36783487  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     ||||| |||||||| ||||||||| |||||||| ||||||||  ||||||||||||| ||||| | | |||||||||  |||       ||| ||||||    
T  36783486 tatgaaaaagacaaatttaaagttgcattgaaaattgtgtgag--agaaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagttgt 36783389  T
Q  341 attgaaaatgtaaagtgacgtttatttt 368  Q
    |||| |||||||||||||| || |||||    
T  36783388 attggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 131 - 319
Target Start/End: Original strand, 4742178 - 4742364
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    |||||| ||||||||||||||||| ||| ||||| |||||||||||| |||||  || | ||| ||||| |||     |||| || ||||||||||  |     
T  4742178 tactctttctgttttaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaatgaaataatcatcagacataacacttttactaaacaac 4742277  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
    ||||  |||| ||||| || ||||||||||||||| |||||||| ||||||||  | ||||||||||||||||||||| ||||||||||    
T  4742278 ccttgttttatatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgag--aaaaaagttggagtatttattgagggtaaagttg 4742364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 21375572 - 21375653
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| || ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  21375572 gtttcaaaatgagtgtcactttagccaattgcacaaagattaaagaatggaataaaatagtcaaatatcatagcaattttac 21375653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 248 - 372
Target Start/End: Complemental strand, 28640206 - 28640084
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    ||||||||||||||||||||||||||| |||  |||  |||||||||| |||||||||||| ||||||||||  ||       ||||||||| |||||||    
T  28640206 aagacaaacttaaagttgtattgaaaattgttcgag--agaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaagttgaattgaaa 28640109  T
Q  348 atgtaaagtgacgtttattttaaaa 372  Q
    |||||||||||| ||||||||||||    
T  28640108 atgtaaagtgacatttattttaaaa 28640084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 27810470 - 27810345
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||| ||| |||||||||||||||||| ||||||||| |  |||||| ||||||||||||| | ||||||||||||       |||||||||||||||||    
T  27810470 aagataaatttaaagttgtattgaaaattgtgtgagaaa--aaagtttgagtatttattgaggataaagttgaaagaaaaaaattaaagttgtattgaaa 27810373  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||| || ||||| ||||||    
T  27810372 atgtaaagtgacattcattttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 34972572 - 34972653
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||| || || |||||||||    
T  34972572 gttttaaaatgagtgtcgctttagccaattgcacacagattaataaatggaataaagtagtcaaatgtcgtatcaattttac 34972653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 29044884 - 29044774
Alignment:
Q  208 tcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattg 307  Q
    ||||| ||||||||||||||||| ||||||||| | ||| |||| ||||||||||||| |||||||| |||||| || ||||||||| ||| ||||||||    
T  29044884 tcataacaattttactaaaataatcttactttataagaataagataaacttaaagttgcattgaaaattgtgtg-gagagaaaagtttgagcatttattg 29044786  T
Q  308 aaggtaaagttg 319  Q
    | | ||||||||    
T  29044785 aggataaagttg 29044774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 375
Target Start/End: Original strand, 38982174 - 38982299
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||| |||||||| |||| ||||  |||||||| ||||||||||||| ||||||||||  ||       |||||||||||||| ||    
T  38982174 aagacaaacttaaagttgcattgaaaattgtgcgaga--gaaaagtttgagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattggaa 38982271  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    || ||||||||| || ||||||||||||    
T  38982272 atataaagtgacattcattttaaaacaa 38982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 42103985 - 42104066
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  42103985 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 42104066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 39730187 - 39730096
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||  |||||||||||||| ||| ||||| |||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  39730187 tactctattcgttttaaaatgagtgtcgttttaggcaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 39730096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 34919961 - 34919847
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||||||||||||||||||| ||||||||||||  || | ||||||||| |||     |||||||||||||||||| |  |||||||||| | ||    
T  34919961 aaaatgagtatcgctttagccaattacacacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgcccttactttataaga 34919862  T
Q  246 acaagacaaacttaa 260  Q
    | |||||||||||||    
T  34919861 aaaagacaaacttaa 34919847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 26660985 - 26660904
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || | |||||| | ||||||| |||||||||||||||    
T  26660985 gttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagttgtcaaatgtcatagcaattttac 26660904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 26932578 - 26932497
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || | |||||| | ||||||| |||||||||||||||    
T  26932578 gttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagttgtcaaatgtcatagcaattttac 26932497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 355
Target Start/End: Complemental strand, 39060031 - 39059825
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| |||||||||||| ||||||||||||| ||| |||||||     ||||| ||||| |||     |||| || |||||||||| || ||||  ||||    
T  39060031 gtttaaaaatgagtatcactttagccaattgtacatagattaa-----ggaatgaaataatcattagacataacacttttactaaactacccttgtttta 39059937  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     ||||| || ||||||||||||||| |||||||| ||| ||||  | |||| |||||||||||||||| |||||||||  |||       ||||||||||    
T  39059936 tatgaaaaaaacaaacttaaagttgcattgaaaattgtatgag--aaaaaatttggagtatttattgagggtaaagttagaag-aaaaaattaaagttgt 39059840  T
Q  341 attgaaaatgtaaag 355  Q
    |||||||||||||||    
T  39059839 attgaaaatgtaaag 39059825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 42661862 - 42661943
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || | |||||||||||||||| ||||| |||||||||    
T  42661862 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttac 42661943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 4371476 - 4371362
Alignment:
Q  259 aaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtga 358  Q
    ||||||| |||||||| |||||||||  |||||||| ||||||||||||| |||||||||   ||       |||||||||||||| |||||||||||||    
T  4371476 aaagttgcattgaaaattgtgtgaga--gaaaagtttgagtatttattgagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtga 4371379  T
Q  359 cgtttattttaaaacaa 375  Q
    |||| ||||| ||||||    
T  4371378 cgttcattttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 15567139 - 15567048
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttact 237  Q
    ||||||||| |||||||||||| || ||||||||||||  || | ||| |  |||||||||||||||||||||||||| ||||| |||||||    
T  15567139 aaaatgagtgtcgctttagccattttcacacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaatagccttact 15567048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 14620424 - 14620496
Alignment:
Q  149 atgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    |||||| |||||||||||||||||||||| |||||  ||  ||||||| ||||||||| ||||||||||||||    
T  14620424 atgagtgtcgctttagccaattgcacacatattaaggaatagaataaagtagtcaaatgtcatagcaatttta 14620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 248 - 368
Target Start/End: Original strand, 32690760 - 32690878
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    ||||||||| |||||||| |||||||| |||| ||||  ||||||||| ||||||||||||  |||||||||| ||       |||||||||||||  ||    
T  32690760 aagacaaacctaaagttgcattgaaaattgtgcgaga--gaaaagttgaagtatttattgagagtaaagttgagagaaaaaaattaaagttgtatttgaa 32690857  T
Q  348 atgtaaagtgacgtttatttt 368  Q
    |||||||||||| || |||||    
T  32690858 atgtaaagtgacattcatttt 32690878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 604 - 644
Target Start/End: Original strand, 33585347 - 33585387
Alignment:
Q  604 ctataaaagagagactacttaactattattcaccattgagt 644  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33585347 ctataaaagagagactacttaactattattcaccattgagt 33585387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 42977996 - 42978076
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||||||| ||| ||||||||||| ||||||||||||  || | |||||| ||||||||| |||||||||||||||    
T  42977996 ttttagaatgagtgtcgttttagccaatttcacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 42978076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 2729698 - 2729789
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||| ||||||| | |||||||||||||||||| |||||||||  || | |||||| ||||||||  |||||||||||||||    
T  2729698 tactccatccgtttcaaaatgattgtcgctttagccaattgcatacagattaaggaatgaaataaagtagtcaaacgtcatagcaattttac 2729789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 217 - 371
Target Start/End: Complemental strand, 15400327 - 15400174
Alignment:
Q  217 ttttactaaaataacctt-actttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaa 315  Q
    ||||||||||||  |||| |||||| | ||| |||  ||||||||||||  |||| ||| ||| |||||  |||||||| ||||||||||||| | ||||    
T  15400327 ttttactaaaattccctttactttataagaaaaaggaaaacttaaagtttcattggaaattgtatgaga--gaaaagtttgagtatttattgaggataaa 15400230  T
Q  316 gttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaa 371  Q
    |||| |||       |||||||||||||| |||||||||||||| || ||||||||    
T  15400229 gttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcattttaaa 15400174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 284
Target Start/End: Original strand, 43257783 - 43257925
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| | | ||||||||||||||||||||||||| || | ||| ||||| |||     |||| || || ||||||| |  ||||||||||    
T  43257783 gttttaaaatgagtgt-gttttagccaattgcacacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactgcccttacttta 43257881  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
     | |||  ||||||||||||||||| |||||||| |||||||||    
T  43257882 taagaaatagacaaacttaaagttgcattgaaaattgtgtgaga 43257925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 13066827 - 13066712
Alignment:
Q  258 taaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtg 357  Q
    |||||||| |||||||| ||||  |||  |||||||||||||||||||||| |||||||||| ||        |||||||||||||| ||||||||| ||    
T  13066827 taaagttgcattgaaaattgtgcaaga--gaaaagttggagtatttattgagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatg 13066730  T
Q  358 acgtttattttaaaacaa 375  Q
    || || ||||| ||||||    
T  13066729 acattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 8336330 - 8336410
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||||| ||| ||||||||||| |||| | |||||  || |||||||| ||||||||| ||||| |||||||||    
T  8336330 ttttaaaatgagtgtcgttttagccaattacacaaatattaaggaatggaataaagtagtcaaatgtcataacaattttac 8336410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 27600624 - 27600544
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||||| || ||||||||||||| ||||| |||||  || | |||||| |||||||||||||| | ||||||||    
T  27600624 ttttaaaatgagtgtcactttagccaattgaacacatattaaggaatgaaataaagtagtcaaatatcattgtaattttac 27600544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 298
Target Start/End: Original strand, 12167522 - 12167688
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    |||||| || |||| ||||||||| |||||||||| ||||||||||| ||||| |||  |||| ||||| |||     || | || |||||||||| |      
T  12167522 tactctctccgtttcaaaatgagtgtcgctttagctaattgcacacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgc 12167621  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggag 298  Q
    |||||||||| | ||| | | |||||||||||||| |||||||| | |||| || |||||||||||||    
T  12167622 ccttactttataagaaaaggtcaaacttaaagttgcattgaaaa-tttgtgtgagagaaaagttggag 12167688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 375
Target Start/End: Original strand, 31557355 - 31557489
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnntt 332  Q
    |||||||| | ||| |||||||||||||||||| |||||||| ||||||||  ||||       |||||||||||||  |||||||| |||       ||    
T  31557355 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgag--agaa------tagtatttattgaaaataaagttggaagaaaaaaatt 31557446  T
Q  333 aaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||| |||| || ||||| ||||||    
T  31557447 aaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 34445952 - 34446030
Alignment:
Q  143 tttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||| |||||||| ||||||||||| | |||||  || | |||||| |||||||||||||||| ||||||||    
T  34445952 tttaaaatgagtgtcgctttaaccaattgcacatatattaaggaatgaaataaagtagtcaaatatcatag-aattttac 34446030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 4011746 - 4011790
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||    
T  4011746 ttaaagttgtatcggaaatgtaaagtgacgttcattttaaaacaa 4011790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 31889785 - 31889741
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||    
T  31889785 ttaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 375
Target Start/End: Original strand, 12167693 - 12167736
Alignment:
Q  332 taaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||| |||||| || ||||||||||||    
T  12167693 taaagttgtattgaaaatgtagagtgacattcattttaaaacaa 12167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 1513120 - 1513042
Alignment:
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaa 309  Q
    |||||||||||| ||  || |||||||||||||||  ||||||| |||| |||  ||||||||| ||||| ||||||||    
T  1513120 ccttactttacaagagaaaaacaaacttaaagttgctttgaaaattgtgagagggagaaaagttagagtacttattgaa 1513042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 24436462 - 24436504
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    |||||||||||||| ||| |||||||||||||||| |||||||    
T  24436462 gttttaaaatgagtgtcgttttagccaattgcacatagattaa 24436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 29807236 - 29807317
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||| ||| |||||||||||||| |||| || |||||  || |||||||| ||||||||| | |||| ||||||||    
T  29807236 gtttcaaaataagtgtcgctttagccaatagcacgcatattaaggaatggaataaattagtcaaatgtaatagaaattttac 29807317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 3305936 - 3306012
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| ||| |||| ||||||||||  | |||||  || | |||||| ||||||||| |||||||||||||||    
T  3305936 aaaatgagtgtcgttttaaccaattgcacgtatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 3306012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 7388291 - 7388335
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||| ||||||||||||| ||||||||| || ||||||||||||    
T  7388291 ttaaaattgtattgaaaatataaagtgacattcattttaaaacaa 7388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 7731703 - 7731747
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||| |||||||| ||||||||| || ||||||||||||    
T  7731703 ttaaagttgttttgaaaatataaagtgacattcattttaaaacaa 7731747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 14006118 - 14006042
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| | |||||||||||||||| | | |||||  || | |||||| ||||||||| ||||||| |||||||    
T  14006118 aaaatgagtgttgctttagccaattgcatatatattaaggaatgaaataaagtagtcaaatgtcatagctattttac 14006042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 14980149 - 14980193
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| || ||||| ||||||    
T  14980149 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 14980193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 28316756 - 28316712
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| |||| |||| |||||||| ||||||    
T  28316756 ttaaagttgtattgaaaatataaaatgacatttattttgaaacaa 28316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 5e-70; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 20512416 - 20512651
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20512416 gttttaaaatgagtgtcgctttagtcaattgcacacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttacttta 20512515  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaagttg 339  Q
     | ||| || |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||        |||||||||    
T  20512516 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaatttaaagttg 20512615  T
Q  340 tattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
     ||||||||||||||| ||| || ||||| ||||||    
T  20512616 cattgaaaatgtaaagcgacattcattttgaaacaa 20512651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 131 - 368
Target Start/End: Original strand, 25722371 - 25722608
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    |||||| ||||||| ||||| ||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||| ||||| |||||||||||||||||    
T  25722371 tactctctctgtttcaaaataagtatcgatttagccaattgcacacagattaagaaatggaataaagtagtcaaatgtcataacaattttactaaaataa 25722470  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||||||||||| ||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| | ||||||||   |||           
T  25722471 ccttactttacaagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttagggtaaagtatgaagaaaaaaa 25722570  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||||||||||||||||||||||| || |||||    
T  25722571 ttaaagttgtattgaaaatgtaaagtgacattcatttt 25722608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 54261648 - 54261414
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||||||||| |||||||||||| |||  ||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  54261648 gtttcaaaatgagtgtcgctttagccaattacacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 54261549  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| || |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||| |||       |||||||||     
T  54261548 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 54261449  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||| |||||| ||||| ||||||    
T  54261448 attgaaaatgtaaagcgacgttcattttgaaacaa 54261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 131 - 375
Target Start/End: Original strand, 54933115 - 54933359
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||| | |||||  || | |||||| ||||||||| ||||| |||||||||||||||||    
T  54933115 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataa 54933214  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||||||||| | ||| | |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||           
T  54933215 ccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 54933314  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||| |||||||||||||| || ||||| ||||||    
T  54933315 ttaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 2988530 - 2988763
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||  || |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  2988530 gtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataaccttacttta 2988629  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | |||||||||||||||||||||| |||||||| |||| |||| ||||||||| ||||||||||||| |||||||||| |||       ||||| ||||    
T  2988630 taagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaa-ttgt 2988728  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||||||||| || ||||| ||||||    
T  2988729 attggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 131 - 354
Target Start/End: Complemental strand, 36541734 - 36541511
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    |||||||||||||||||||||||| |||||||| |||||| |||| | |||||  || | |||||||||||||||| | ||||||||||||||||||| |    
T  36541734 tactctatctgttttaaaatgagtgtcgctttaaccaattacacatatattaaggaatgaaataaaatagtcaaatgttatagcaattttactaaaatta 36541635  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||| ||||| | |||||||||||||||||||||| || ||||| ||||||||| |||||||||||| |||||||||| |||||||||| |||           
T  36541634 ccttgctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaataaa 36541535  T
Q  331 ttaaagttgtattgaaaatgtaaa 354  Q
     |||||||||||||||||||||||    
T  36541534 gtaaagttgtattgaaaatgtaaa 36541511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 51381957 - 51381720
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||  || | ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51381957 gtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaaatagtcaaatatcatagcagttttactaaaataaccttacttta 51381858  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaa--gtgtgtgagacagaaaagttggagtatttattgaaggtaaagtt-gaaagnnnnnnnttaaagt 337  Q
     |  || |||||||||||||||||| ||||||||  ||||| |||| |||||| ||||||||||||| || ||||||||| |||         |||||||    
T  51381857 taataaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaagaaaaaaaattaaagt 51381758  T
Q  338 tgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||| |||||||||||||| |||||||| ||||||    
T  51381757 tgtattgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 146 - 375
Target Start/End: Original strand, 32303830 - 32304059
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||| ||| |||| | ||| | |||||||||||  || | |||||| ||||||||| ||||||||||||||||||||||||||||||||| | ||    
T  32303830 aaaatgagtgtcgttttaactaatcgtacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttataaga 32303929  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattga 345  Q
    | ||| ||||||||||| ||||||||||| ||||| ||| ||||||||| ||||||||||||| |||||||||| |||       |||||||||||||||    
T  32303930 aaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattga 32304029  T
Q  346 aaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| || |||| |||||||    
T  32304030 aaatgtaaagtgacattcatttcaaaacaa 32304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 141 - 368
Target Start/End: Original strand, 43687803 - 43688033
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||| ||| ||| ||||| ||||||||||| ||||||  || |||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  43687803 gtttcaaaataagtgtcgttttagtcaattgcacacggattaatgaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 43687902  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag---nnnnnnnttaaagt 337  Q
     | |||||||||||| ||||||||  |||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||          |||||||    
T  43687903 taagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaaaattaaagt 43688002  T
Q  338 tgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||| |||||||||||||| ||||||||    
T  43688003 tgtattggaaatgtaaagtgacatttatttt 43688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 146 - 375
Target Start/End: Complemental strand, 43169562 - 43169333
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||| ||| ||| ||||| ||||| |||| |||||||  || | |||||| ||||||||| |||| ||| |||||||||||||||||||||||| | ||    
T  43169562 aaaattagtgtcgttttagtcaattacacaaagattaaggaatgaaataaagtagtcaaatgtcattgcagttttactaaaataaccttactttataaga 43169463  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattga 345  Q
    | ||||||||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||||||||||||  |||       ||||||||||||||     
T  43169462 ataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaagttagaagaaaaaaattaaagttgtattgg 43169363  T
Q  346 aaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||| || ||||| ||||||    
T  43169362 aaatgtaaaatgacattcattttgaaacaa 43169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 128 - 319
Target Start/End: Complemental strand, 44645585 - 44645393
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    |||||||||||| |||| ||||| | | ||| |||||| |||| |||||| |||||| || | |||||| ||||||||||||||||||||||| ||||||    
T  44645585 tattactctatccgtttcaaaataaatgtcgttttagctaattacacacatattaaagaatgaaataaagtagtcaaatatcatagcaattttgctaaaa 44645486  T
Q  228 taa-ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
    ||| |||||||||| ||||| |||| ||||||||||||| |||||||| | ||| ||| ||||||||||||||||||||||| ||||||||||    
T  44645485 taaaccttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttg 44645393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 142 - 372
Target Start/End: Original strand, 42006983 - 42007212
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| ||| |||||||||||||| |  ||||||| ||  |||||||||||||| || ||||||||||||| |||||||||||||| ||||     
T  42006983 ttttaaaatgagtgtcgatttagccaattgcatatggattaaagaatagaataaaatagtcagatgtcatagcaatttttctaaaataaccttattttat 42007082  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgta 341  Q
    | |||||||||||||||||||||| |||||||| ||| ||| | | ||||||| ||||||||||| | | ||||||| |||        ||||| |||||    
T  42007083 aagaacaagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagtttgagtatttattaaggataaagtttaaa-aaaaaatttaaaattgta 42007181  T
Q  342 ttgaaaatgtaaagtgacgtttattttaaaa 372  Q
    |||||||||||||  ||| || |||||||||    
T  42007182 ttgaaaatgtaaaacgacattcattttaaaa 42007212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 52201847 - 52201979
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    |||||||||| || ||| ||||| ||||||||||| ||||||  ||  |||||||||||| |||| |||||  ||||||||||||||||||||||||||     
T  52201847 ttttaaaatgcgtgtcgttttagtcaattgcacacggattaaggaatagaataaaatagttaaatgtcataataattttactaaaataaccttactttaa 52201946  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaa 274  Q
    | ||||||||||||||||| |||||||||||||    
T  52201947 aggaacaagacaaacttaatgttgtattgaaaa 52201979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 130 - 375
Target Start/End: Complemental strand, 53560908 - 53560664
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 229  Q
    ||||||| || |||||||||| ||| ||| ||||||||||| || ||| |||||  ||   |||||| |||| |||| |||||  |||||||||||||||    
T  53560908 ttactctctccgttttaaaataagtgtcgttttagccaattacatacatattaaggaataaaataaagtagttaaatgtcataataattttactaaaata 53560809  T
Q  230 accttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnn 329  Q
    ||||||||||| | ||| ||||||| |||||||||| |||||||| | ||||||| ||||||||| |||| ||||| || | |||||||| |||          
T  53560808 accttactttataagaaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttttatcgaggataaagttggaag-aaaaa 53560710  T
Q  330 nttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
     ||||||||| |||| |||||||||  ||| |||||||| ||||||    
T  53560709 attaaagttgcattgtaaatgtaaaacgacatttattttgaaacaa 53560664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 141 - 354
Target Start/End: Original strand, 647514 - 647725
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaa-atatcatagcaattttactaaaataaccttacttt 239  Q
    |||| ||||| ||| ||| |||| ||||||||||||||||||| ||| | ||| ||||| |||  | || ||| || |||||||||| |  |||||||||    
T  647514 gtttcaaaataagtgtcgttttacccaattgcacacagattaagaaatgaaatgaaataatcattagat-ataacagttttactaaactgcccttacttt 647612  T
Q  240 acatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttg 339  Q
    | | ||| |||||||||||||||||| |||||||| | ||| ||  ||||||||| ||||||||||||| |||||||||| |||       |||||||||    
T  647613 ataagaaaaagacaaacttaaagttgcattgaaaattctgtaag--agaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttg 647710  T
Q  340 tattgaaaatgtaaa 354  Q
    |||||||||||||||    
T  647711 tattgaaaatgtaaa 647725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 217 - 375
Target Start/End: Original strand, 37225593 - 37225749
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| ||||||||| |||||||| |||||||||  |||||||| | ||||||||||| |||||||    
T  37225593 ttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttagcgtatttattgagggtaaag 37225690  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       |||||||||||||| |||||||||||||| || ||||| ||||||    
T  37225691 ttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 37225749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 43580710 - 43580474
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaa-atatcatagcaattttactaaaataaccttacttt 239  Q
    |||||||||||||   |||||||||||||||||||||||||||  ||  |||| ||||| |||  | || ||| || |||||||||| |  ||||  |||    
T  43580710 gttttaaaatgagcgacgctttagccaattgcacacagattaaggaatagaatgaaataatcattacat-ataacatttttactaaactgcccttgtttt 43580612  T
Q  240 acat--gaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaag 336  Q
    | ||  ||| |||||||| ||||||||| |||||||| ||||||||| | ||||||||||||||||||| | |||||||||| |||        ||||||    
T  43580611 atatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaa-aaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaag 43580513  T
Q  337 ttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  43580512 ttgtattgaaaatgtaaagtgacatttattttgaaacaa 43580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 83450 - 83295
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| || |||||||||| | ||| |||||||||||||||||| |||||||| || |||||  ||||||||| ||||||||| ||| |||||||    
T  83450 ttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgcgtgag--agaaaagttagagtatttaatgagggtaaag 83353  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       |||||||||||||||||||||||| |||| || ||||| ||||||    
T  83352 ttggaag-aaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 217 - 375
Target Start/End: Original strand, 46363008 - 46363165
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| || ||||| ||||||||| |||| ||| |||||||||  |||||||||||||||||||||| |||||||    
T  46363008 ttttactaaactgtccttactttataagaaaaatacaaatttaaagttgcattgtaaattgtgtgaga--gaaaagttggagtatttattgagggtaaag 46363105  T
Q  317 ttgaaag-nnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||        ||||||||||||||||||||||||||||| || ||||| ||||||    
T  46363106 ttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 133 - 263
Target Start/End: Original strand, 10351927 - 10352057
Alignment:
Q  133 ctctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataacc 232  Q
    |||||||||||||||||||||  ||||||||| |||||| | ||||||||| |||   |||||| || ||||||||||||||||||| |||| ||||| |    
T  10351927 ctctatctgttttaaaatgagcgtcgctttagtcaattgtatacagattaagaaattaaataaagtaatcaaatatcatagcaatttcactacaataatc 10352026  T
Q  233 ttactttacatgaacaagacaaacttaaagt 263  Q
    ||| |||| | ||| |||||||| |||||||    
T  10352027 ttattttataagaataagacaaatttaaagt 10352057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 44854470 - 44854314
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtg-tgagacagaaaagttggagtatttattgaaggtaaa 315  Q
    |||||||||| |  |||||||||| | ||| || ||||||||||||||| |||||||| |||  |||||  |||||||||||||||||||||| ||||||    
T  44854470 ttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattgaaaattgtactgaga--gaaaagttggagtatttattgagggtaaa 44854373  T
Q  316 gttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
     ||| |||       ||||| |||||||||||||||||||||||||| ||||| ||||||    
T  44854372 attggaag-aaaaagttaaaattgtattgaaaatgtaaagtgacgttcattttgaaacaa 44854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 3000877 - 3000751
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaagttgtattgaa 346  Q
    |||||||| ||||||||| |||||||| |||||||||  |||||||||||||||||||||| |||| |||||  ||        ||||||||||||||||    
T  3000877 aagacaaatttaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttattgagggtagagttgggagaaaaaaaattaaagttgtattgaa 3000780  T
Q  347 aatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||| || || ||||||||||||    
T  3000779 aatgtaaagtaacattcattttaaaacaa 3000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 248 - 375
Target Start/End: Original strand, 15514754 - 15514880
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaagttgtattgaa 346  Q
    |||||||||||||||||| |||||||| | || ||||  ||||||||||||||| |||||||||||||||||  ||        |||||||||||||| |    
T  15514754 aagacaaacttaaagttgcattgaaaattatgcgaga--gaaaagttggagtatctattgaaggtaaagttgggagaaaaaaaattaaagttgtattgga 15514851  T
Q  347 aatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||| ||||||| |||||||    
T  15514852 aatgtaaagtgacatttatttgaaaacaa 15514880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 38364033 - 38363941
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||| || |||||||||||||| ||| |||||||||||||| |||||||||  || ||||||||  |||||||| |||||||||||||||    
T  38364033 ttactctctccgttttaaaatgagtgtcgttttagccaattgcatacagattaaccaatggaataaagcagtcaaatgtcatagcaattttac 38363941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 45213642 - 45213722
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||||| |||||||||||||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  45213642 ttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 45213722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 4392028 - 4391903
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||| |||||||| |||| ||||  |||||||||||||||||||||| ||||||||||  ||       ||||| ||||| | |||    
T  4392028 aagacaaacttaaagttgcattgaaaattgtgcgaga--gaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgtactaaaa 4391931  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||  || ||||||||||||    
T  4391930 atgtaaagtgatattcattttaaaacaa 4391903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 38457584 - 38457480
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||| ||||||||| ||| |||||||| |||||||||  |||||||||||||||||||||| |||||||||| | |       |||||||||||||||||    
T  38457584 aagataaacttaaaattgcattgaaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaa 38457487  T
Q  348 atgtaaa 354  Q
    |||||||    
T  38457486 atgtaaa 38457480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 47138209 - 47138115
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||| ||| |||| ||||||||| || |||||| |||||||||||| |||||| ||  ||||||| ||||||||| |||||||||||||||    
T  47138209 tattactccatccgtttcaaaatgagtgtcactttagtcaattgcacacatattaaataattgaataaagtagtcaaatgtcatagcaattttac 47138115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 375
Target Start/End: Complemental strand, 49471015 - 49470788
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    |||||| || |||||||||||||||||| ||||   ||||||||||| |||||| ||  ||||||||||||||||| ||||||||||||               
T  49471015 tactctctccgttttaaaatgagtatcgttttaaataattgcacacaaattaaagaattgaataaaatagtcaaatgtcatagcaattt----------- 49470927  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
      |||||    | ||| ||||||||||||||| || |||||||| ||||| ||| ||||||||||||||||||||||  | |||| ||| | |           
T  49470926 --ttact----aagaataagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttattgtggctaaatttggatgaaaaaaa 49470833  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||  ||| || ||||| ||||||    
T  49470832 ttaaagttgtattgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 142 - 298
Target Start/End: Original strand, 27483116 - 27483270
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| ||||||||||| |||||||||| |||||  || | ||| ||||| |||     |||| || |||||||||| |  ||||||||||     
T  27483116 ttttaaaatgagtgtcgctttagcccattgcacacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttat 27483215  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggag 298  Q
    | ||| |||||||||||||||||| |||||||| | ||||||  |||||||||||||    
T  27483216 aagaaaaagacaaacttaaagttgcattgaaaattatgtgag--agaaaagttggag 27483270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 36729687 - 36729772
Alignment:
Q  137 atctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||| ||||||||  ||| |||||||||||||||||| |||||  || |||||||| ||||||||||||||| |||||||||    
T  36729687 atctgtttcaaaatgagcgtcgttttagccaattgcacacatattaagtaatggaataaagtagtcaaatatcataacaattttac 36729772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 47895263 - 47895344
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || | |||||| |||||| || |||||||||||||||    
T  47895263 gttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagtagtcatatgtcatagcaattttac 47895344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 45391878 - 45391958
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||||| ||| ||||||||||||| |||| |||||| || |||||||| || |||||| |||||||||||||||    
T  45391878 ttttaaaatgagtgtcggtttagccaattgcgcacatattaaacaaaggaataaagtaatcaaatgtcatagcaattttac 45391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 50420379 - 50420258
Alignment:
Q  251 acaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatg 350  Q
    ||||||||||||||| |||||||| || | ||||  |||||||| |||||||||||||| ||||||||| |||       ||||||||||||| ||||||    
T  50420379 acaaacttaaagttgcattgaaaattgcgcgaga--gaaaagttagagtatttattgaaagtaaagttggaag-aaaaaattaaagttgtattaaaaatg 50420283  T
Q  351 taaagtgacgtttattttaaaacaa 375  Q
    |||| |||| |||||||| ||||||    
T  50420282 taaaatgacatttatttttaaacaa 50420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 33193950 - 33194031
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||  || | |||||| ||||||||| ||||| |||||||||    
T  33193950 gtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcataacaattttac 33194031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 51398241 - 51398160
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||| | |||||| || |||||| | ||| |||||||||    
T  51398241 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaatgaaataaagtaatcaaatgttataacaattttac 51398160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 284
Target Start/End: Original strand, 2567934 - 2568077
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaa-atatcatagcaattttactaaaataaccttacttt 239  Q
    |||||||||||| | ||| |||||||||||||||| |||||||  ||  |||| ||||| |||  | || ||| || |||||| |||||  |||||||||    
T  2567934 gttttaaaatgaatgtcgttttagccaattgcacatagattaaggaattgaatgaaataatcattagat-ataacacttttacaaaaatgtccttacttt 2568032  T
Q  240 acatgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    | | ||| |||||||||||||||||| |||||||| |||||||||    
T  2568033 ataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 2568077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 22731013 - 22730924
Alignment:
Q  286 agaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||||||||||||||||||||||| |||       |||||||||||||| ||||||||| |||| || | ||||||||||    
T  22731013 agaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 27027857 - 27027732
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||| ||||||||| |||||||| |||||||||  |||||||||||||||||||| | | |||||||  |||       ||||| |||||||| ||    
T  27027857 aagacaaatttaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgtattggaa 27027760  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||| |||| || ||||| ||||||    
T  27027759 atgtaaattgacattaattttgaaacaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 31853482 - 31853561
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    ||||||||||| | |||||||| ||||||||||  |||||||| || | |||||||||||||||| ||||| ||||||||    
T  31853482 ttttaaaatgaatgtcgctttaaccaattgcacttagattaaagaatgaaataaaatagtcaaatgtcataacaatttta 31853561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 375
Target Start/End: Original strand, 26965506 - 26965653
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| ||||||||| |||||||| |||||||||  ||||||||||||         | |||||||    
T  26965506 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttggag---------agggtaaag 26965594  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       ||||||||||||||||||||||||||||| || ||||| ||||||    
T  26965595 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 26965653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 366
Target Start/End: Original strand, 35099395 - 35099511
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||| ||| |||||||| |||| ||||  |||||||| ||||||||||| | ||||||||||  ||       |||||||||||||| ||    
T  35099395 aagacaaacttaaaattgcattgaaaattgtgcgaga--gaaaagtttgagtatttattaagggtaaagttgggagaaaaaaattaaagttgtattggaa 35099492  T
Q  348 atgtaaagtgacgtttatt 366  Q
    ||||||| |||| ||||||    
T  35099493 atgtaaaatgacatttatt 35099511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 2458239 - 2458158
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| || ||||||||||||||||||| |||||  || | |||||| |||| |||| |||||||||||||||    
T  2458239 gtttcaaaatgagtgtcactttagccaattgcacacatattaaggaatgcaataaagtagtaaaatgtcatagcaattttac 2458158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 23525243 - 23525316
Alignment:
Q  149 atgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| ||| |||||||||||||||||| |||||  || |||||||| ||||||||| ||||| |||||||||    
T  23525243 atgagtgtcgttttagccaattgcacacatattaaggaagggaataaagtagtcaaatgtcataacaattttac 23525316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 3152723 - 3152807
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||||||||| ||| |||| ||||||||||||| |||||  || | |||||| |||||| || ||||| |||||||||    
T  3152723 tctgttttaaaatgagtgtcgttttaaccaattgcacacatattaaggaatgaaataaagtagtcagatgtcataacaattttac 3152807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 19552583 - 19552539
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||||||| || ||||||||||||    
T  19552583 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 19552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 372
Target Start/End: Original strand, 1340943 - 1341071
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnntt 332  Q
    |||||||| | ||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||         || ||||| |||| |||       ||    
T  1340943 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagttgga---------gagggtaacgttggaagaaaaaaatt 1341031  T
Q  333 aaagttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  1341032 aaagttgtattgaaaatgtaaagtgacattcattttaaaa 1341071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 34060020 - 34059875
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| || |||||||||| | ||| |||||||  ||||||||| |||||||| |||| ||||  ||||||||||||         | |||||||    
T  34060020 ttttactaaactacccttactttataagaaaaagacaa--ttaaagttgcattgaaaattgtgcgaga--gaaaagttggag---------agggtaaag 34059934  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||       |||||||||||||||||||||||| |||| || ||||||||||||    
T  34059933 ttgaaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaa 34059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 375
Target Start/End: Original strand, 36771605 - 36771721
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||| |||||||| |||||||||  ||||||||||||         | | ||||||||||||       |||||||||||||| ||    
T  36771605 aagacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagttggag---------aggataaagttgaaagtaaaaaattaaagttgtattgtaa 36771693  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||| || ||||||||||||    
T  36771694 atgtaaagtgacattcattttaaaacaa 36771721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 41850622 - 41850531
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||| |||||||||  ||||||||| ||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  41850622 tactccatccgtttcaaaatgagtggcgctttagctaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 41850531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 45567027 - 45566949
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||  |||||||||||||||| ||||||||    | |||||| ||||||||| |||||||||||||||    
T  45567027 gttttaaaatgagtgtcattttagccaattgcacatagattaaat---gtaataaagtagtcaaatgtcatagcaattttac 45566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 30426266 - 30426323
Alignment:
Q  165 ccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||||||||  || |||||| | ||||||||| |||||||||||||||    
T  30426266 ccaattgcacacagattaaggaatggaatatagtagtcaaatgtcatagcaattttac 30426323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 35239516 - 35239438
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
    |||||||||| |  |||||||||| | ||| |||||||||||||||||| | |||||| ||||||||  ||||||||||||    
T  35239516 ttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaattgtgtgag--agaaaagttgga 35239438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 38165587 - 38165712
Alignment:
Q  145 taaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatg 244  Q
    |||||||||| ||| ||||| |||||||| |||||||||  || | ||| ||||| |||   | |||| || |||||||||| |  |||||||||| | |    
T  38165587 taaaatgagtgtcgttttagtcaattgcatacagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtccttactttataag 38165686  T
Q  245 aacaagacaaacttaaagttgtattg 270  Q
    || |||||||||||||||||| ||||    
T  38165687 aaaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 45095596 - 45095555
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  45095596 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaa 45095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 53200600 - 53200681
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| |||||||||  | |||||| ||||| |||| |||||||| || | |||||| ||||||||| |||||||||||||||    
T  53200600 gtttcaaaatgagtgccactttagtcaattacacaaagattaaagaatgaaataaagtagtcaaatgtcatagcaattttac 53200681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 2568113 - 2568157
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||||||| || || ||||||||||||    
T  2568113 ttaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 2568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 284
Target Start/End: Original strand, 44648332 - 44648476
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||  || | ||| ||||| |||     |||| || |||||||||| |  | ||||||||    
T  44648332 gtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgcctttacttta 44648431  T
Q  241 -catgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
      |  || |||||||||||||||||| |||||||| |||||||||    
T  44648432 tgagaaaaaagacaaacttaaagttgaattgaaaattgtgtgaga 44648476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 221
Target Start/End: Complemental strand, 51482170 - 51482086
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatca-tagcaatttta 221  Q
    ||||||||||||||||| ||| ||||  ||||| ||||||||||||  || | |||||| ||||||||||| | |||||||||||    
T  51482170 tctgttttaaaatgagtgtcgttttaaacaattacacacagattaaggaatgaaataaagtagtcaaatattagtagcaatttta 51482086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 6937895 - 6937934
Alignment:
Q  198 tagtcaaatatcatagcaattttactaaaataaccttact 237  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  6937895 tagtcaaatatcatagcaattttactgaaatagccttact 6937934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 27039451 - 27039379
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaa 322  Q
    |||||||| ||||||||| |||||||| |||||||||  | |||||||||||||||||| |   |||||||||||    
T  27039451 aagacaaatttaaagttgcattgaaaattgtgtgaga--ggaaagttggagtatttattaagaataaagttgaaa 27039379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 31290883 - 31290938
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||||||  || |||||||||||||| ||| ||||||||||| ||||||||||||    
T  31290883 tattactccctccgttttaaaatgagtgtcgttttagccaattacacacagattaa 31290938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 375
Target Start/End: Original strand, 44648512 - 44648555
Alignment:
Q  332 taaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||| |||||||||||||| || ||||||||||||    
T  44648512 taaagttgtattggaaatgtaaagtgacattcattttaaaacaa 44648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 319
Target Start/End: Complemental strand, 5244706 - 5244640
Alignment:
Q  251 acaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
    ||||||||||||||| ||||||||   |||||||  ||||| || ||||||||||||| ||||||||||    
T  5244706 acaaacttaaagttgcattgaaaataatgtgaga--gaaaaattagagtatttattgagggtaaagttg 5244640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 33024238 - 33024299
Alignment:
Q  160 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    |||||||||||||||||| |||||  ||  ||||||| ||||| |||||| |||||||||||    
T  33024238 tttagccaattgcacacaaattaaggaattgaataaagtagtcgaatatcgtagcaatttta 33024299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 42940208 - 42940171
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacaga 179  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  42940208 ttttaaaatgagtgtcgctttagccaattacacacaga 42940171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 43599853 - 43599907
Alignment:
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggag 298  Q
    ||||| |||||||||||||||||| ||| |||| ||||||||  |||||||||||||    
T  43599853 atgaaaaagacaaacttaaagttgcattaaaaattgtgtgag--agaaaagttggag 43599907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 44676452 - 44676371
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| | | ||||||||||| |||||| |||||  ||  ||||||| |||| |||| |||||||||||||||    
T  44676452 gtttcaaaatgagtgttgttttagccaattacacacatattaaggaatagaataaagtagttaaatgtcatagcaattttac 44676371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 790139 - 790095
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| || ||||| ||||||    
T  790139 ttaaagttgtattggaaatgtaaagtgacattaattttgaaacaa 790095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 11393776 - 11393696
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    |||||||||||||| ||||||||  || ||| ||| | ||||| |||  ||||||| |||||||||| |||| ||||||||    
T  11393776 gttttaaaatgagtgtcgctttaatcagttgtacatatattaagaaatagaataaagtagtcaaataccataacaatttta 11393696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 25061747 - 25061703
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||| | || ||||||||||||    
T  25061747 ttaaagttgtattggaaatgtaaagtggcattcattttaaaacaa 25061703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 43736783 - 43736827
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcaca 175  Q
    ||||| ||| |||| ||||||||| ||||||||||||||||||||    
T  43736783 tactccatccgtttcaaaatgagtgtcgctttagccaattgcaca 43736827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 5e-67; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 32345756 - 32345990
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  32345756 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 32345855  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||       |||||||||     
T  32345856 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 32345955  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||| ||| || ||||| ||||||    
T  32345956 attgaaaatgtaaagcgacattcattttgaaacaa 32345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 131 - 375
Target Start/End: Original strand, 36446981 - 36447225
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||||||||||    
T  36446981 tactccatctgttttaaaatgagtgttgctttagacaattgcacacaaattaatgaatggaataaagtagtcaaatgtcatagcaattttactaaaataa 36447080  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    | |||||||| | ||| ||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||| ||| | |||||||| |||           
T  36447081 cattactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaa 36447180  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||| |||||||||||||||||| |||| || ||||| ||||||    
T  36447181 ttaaaattgtattgaaaatgtaaaatgacattcattttgaaacaa 36447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 19906645 - 19906413
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||  || |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19906645 gtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaaatagtcaaatgtcatagcaattttactaaaataaccttacttta 19906546  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | |||||||||||||||||||||| ||||||||   ||||||| |||||||||||| |||||||||| |||||||||| |||       | ||||||||    
T  19906545 taggaacaagacaaacttaaagttgcattgaaaa--ttgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaaaaaataaaagttgt 19906448  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||||| ||| || ||||| ||||||    
T  19906447 attggaaatgtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 141 - 354
Target Start/End: Original strand, 39117410 - 39117622
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  39117410 gttttaaaatgagtgtcgctttatccacttgcacacagattaaagaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 39117509  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| |||||||||||||||||| |||||||| ||||||||| |||||| |||||||||| ||||| ||||| |||| |||       ||||||||||    
T  39117510 taagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaa-ttggagtattcattgagggtaatgttggaagaaaataattaaagttgt 39117608  T
Q  341 attgaaaatgtaaa 354  Q
    ||||||||||||||    
T  39117609 attgaaaatgtaaa 39117622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 131 - 375
Target Start/End: Complemental strand, 26963722 - 26963478
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| ||| |||| ||||||||| | |||||| ||| || |||||| ||||| ||| |||||||||||||||||| ||||| |||||||||||||||||    
T  26963722 tactccatccgtttcaaaatgagtgttgctttaaccatttacacacaaattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataa 26963623  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||||||||| | ||| |||||||||||||||||| |||||||| | ||||||| ||||||||||||||||| ||||| |||||||||| |||           
T  26963622 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgagggtaaagttggaagaaaaaaa 26963523  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||| |||||||||  ||| |||||||| ||||||    
T  26963522 ttaaagttgcattggaaatgtaaatagacatttattttgaaacaa 26963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 6522050 - 6521817
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || | |||||| ||||||||| ||||| ||||| |||||||||||||||||||||    
T  6522050 gttttaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcataacaattatactaaaataaccttacttta 6521951  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| |||||||||||||| |||||||||||| ||||||||| ||  || || ||||||||||||||||||||||||||||       ||||| |||     
T  6521950 taagaaaaagacaaacttaaaattgtattgaaaattgtgtgagagagggaaatttgagtatttattgaaggtaaagttgaaagaaaaaatttaaa-ttgc 6521852  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||| ||  || ||||||||||||    
T  6521851 attgaaaatgtaaagcgatattcattttaaaacaa 6521817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 138 - 375
Target Start/End: Original strand, 31416669 - 31416906
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttact 237  Q
    ||||||||||||||| | || ||||||| ||||||||||  |||||  || | |||||| || |||||| ||| | ||||||||||||||||| |||| |    
T  31416669 tctgttttaaaatgattgtcactttagctaattgcacacgaattaaggaatgaaataaagtaatcaaatgtcaaaacaattttactaaaataatcttatt 31416768  T
Q  238 ttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagt 337  Q
    ||| | |||||||||||| ||||||||| |||||||| ||||||||| |||||| ||| |||||||||||| |||||||||| |||       |||||||    
T  31416769 ttataagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaagaaaaaaattaaagt 31416868  T
Q  338 tgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||  || ||||||||||||    
T  31416869 tgtattgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 191 - 355
Target Start/End: Original strand, 10684801 - 10684965
Alignment:
Q  191 aataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaa 290  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||||| |||||||| ||||||||| |||||    
T  10684801 aataaaatagttaaatatcataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaa 10684900  T
Q  291 agttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaag 355  Q
    ||||  | |||||||| | |||||||||| |||       ||||||||| |||||||||||||||    
T  10684901 agttttaatatttattaagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaag 10684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 191 - 375
Target Start/End: Complemental strand, 30515156 - 30514972
Alignment:
Q  191 aataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaa 290  Q
    |||||||||||| ||| | |||| ||||||| |||||||||||||||||  | ||| |||||||| ||||||||||||| |||| ||| ||||| | |||    
T  30515156 aataaaatagtcgaatgttatagtaattttattaaaataaccttactttttaagaataagacaaatttaaagttgtatttaaaattgtctgagagaaaaa 30515057  T
Q  291 agttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||||||| |||       |||||||||||||| ||||||||| |||| || ||||| ||||||    
T  30515056 agttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 160 - 368
Target Start/End: Original strand, 42043926 - 42044127
Alignment:
Q  160 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaactta 259  Q
    ||||||||||||||||| |||||| | |   |||||| |||| |||| ||| |  ||||||||||||||||||| |||||| ||       |||| ||||    
T  42043926 tttagccaattgcacacggattaagagataaaataaagtagttaaatgtcaaaataattttactaaaataacctaactttatat-------acaatctta 42044018  T
Q  260 aagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgac 359  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||       |||||||||||||||||||||||||||||    
T  42044019 aagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgac 42044118  T
Q  360 gtttatttt 368  Q
     || |||||    
T  42044119 attaatttt 42044127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 208 - 375
Target Start/End: Complemental strand, 36836224 - 36836058
Alignment:
Q  208 tcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattg 307  Q
    ||||| |||||||||||||||||| |||||||| |  ||||||||||| ||||||||| |||||||| | ||||||| |||||| ||||||| |||| ||    
T  36836224 tcatatcaattttactaaaataacattactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgagagagaaaaattggagtgtttactg 36836125  T
Q  308 aaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
     ||||||||||| |||       ||||||||||||||||||||||||| ||| || ||||| ||||||    
T  36836124 -aggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcattttgaaacaa 36836058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 167 - 297
Target Start/End: Original strand, 29001512 - 29001642
Alignment:
Q  167 aattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgt 266  Q
    |||| ||||| ||||||  ||||||||||| |||| ||||||||||| ||||||| |||||||| |||| |||| | |||||| |||||||||||||||     
T  29001512 aattacacaccgattaagtaacggaataaagtagttaaatatcatagaaattttaataaaataatcttattttataggaacaaaacaaacttaaagttgc 29001611  T
Q  267 attgaaaagtgtgtgagacagaaaagttgga 297  Q
    |||||||| ||||||||| | ||||||||||    
T  29001612 attgaaaattgtgtgagaaataaaagttgga 29001642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 217 - 375
Target Start/End: Original strand, 41905933 - 41906088
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| ||||||||| |||||||| ||||| |||  |||||||||||||||||||||| |||||||    
T  41905933 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtaaga--gaaaagttggagtatttattga-ggtaaag 41906029  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       |||||||||||||  |||||||||||||| |||||||||||||||    
T  41906030 ttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttattttaaaacaa 41906088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 40298971 - 40298846
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||  |||||||| |||||||||  |||||||||||||||||||||| ||||||||||  ||       |||||||||||||||||    
T  40298971 aagacaaacttaaagttacattgaaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaa 40298874  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||| || ||||| ||||||    
T  40298873 atgtaaagtgacattcattttgaaacaa 40298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 37815955 - 37815874
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||| |||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||||||    
T  37815955 gttttaaaatgagtgtcgttttagccaattgcacacatattaaagaatggaataaaatagtcaaatgtcatagcaattttac 37815874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 42259471 - 42259702
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||| ||||||||||||||| ||||||| || | ||| | ||| | |     |||| || ||||||||||||  ||||||||||    
T  42259471 gtttcaaaatgagtgtcgctctagccaattgcacacggattaaagaatgaaatgagataattattagacataacacttttactaaaatgcccttacttta 42259570  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| ||||||| |||||||||| |||||||| | ||||||||  ||||||| ||||||||||||| |||||||||| |||       ||||||||||    
T  42259571 taagaaaaagacaagcttaaagttgcattgaaaattatgtgagac--aaaagtttgagtatttattgagggtaaagttggaag-aaaaaattaaagttgt 42259667  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||| ||||| | || || ||||||||||||    
T  42259668 attgaaaacgtaaaataacattcattttaaaacaa 42259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 45933509 - 45933589
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    |||||||||||||| |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||||||||||||    
T  45933509 gttttaaaatgagtgtcgctttagccacttgcacacagattaaggaattgaataaaatagtcaaatatcatagcaatttta 45933589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 23155372 - 23155463
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||| |||| |||| |||||||||||||||    
T  23155372 tactccatccgttttaaaatgagtatcgctttagccaattgcatacagattaaagaattgaataaagtagttaaatgtcatagcaattttac 23155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 233 - 359
Target Start/End: Original strand, 34002147 - 34002271
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnntt 332  Q
    |||||||| | ||| |||||||| ||||||||| |||||||| |||||||||  |||||||||||||||||||||| |||||||||| |||       ||    
T  34002147 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttggaagaataaaatt 34002244  T
Q  333 aaagttgtattgaaaatgtaaagtgac 359  Q
    ||| |||||||| ||||||||||||||    
T  34002245 aaacttgtattggaaatgtaaagtgac 34002271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 232 - 375
Target Start/End: Original strand, 3680936 - 3681077
Alignment:
Q  232 cttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnt 331  Q
    ||||||||| | ||| |||||||| ||||||||| ||| |||| | |||||||  |||||||| | ||||||||| | |||||||||| |||       |    
T  3680936 cttactttataagaaaaagacaaatttaaagttgcatttaaaattctgtgaga--gaaaagttagtgtatttattaatggtaaagttggaagaacaaaat 3681033  T
Q  332 taaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  3681034 taaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 237 - 372
Target Start/End: Original strand, 30833112 - 30833245
Alignment:
Q  237 tttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaag 336  Q
    |||| ||||| |||||||||||| ||||  | |||||| ||||||||| |  |||||||||||||||||||||||||||||||||||       | ||||    
T  30833112 tttatatgaaaaagacaaacttagagttacactgaaaattgtgtgagaaa--aaagttggagtatttattgaaggtaaagttgaaagaaaaaaataaaag 30833209  T
Q  337 ttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
    |||||||||||||||||| |||  || |||||||||    
T  30833210 ttgtattgaaaatgtaaaatgatattcattttaaaa 30833245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 1103639 - 1103483
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| || |||||||||| |  || || ||||| ||||||||  |||||||| |||||||||  ||||||||| |||||||||||| |||||||    
T  1103639 ttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaattgtgtgaga--gaaaagttgaagtatttattgagggtaaag 1103542  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       |||||||||||||| ||||||||| |||| || ||||| ||||||    
T  1103541 ttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 1103483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 42879841 - 42879935
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| || |||| ||||||||||||| |||||||||||||||||||||||| |||  || |||||||| ||| ||||| |||||||||||||||    
T  42879841 tattattccatctattttaaaatgagtgtcgctttagccaattgcacacagagtaaggaatggaataaagtaggcaaatgtcatagcaattttac 42879935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 1742222 - 1742141
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  1742222 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 1742141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 44453364 - 44453283
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||| |||||||||||||| |||||||||| || |||||||| ||||||||| ||||| |||||||||    
T  44453364 gttttaaaatgagtgtcgttttagccaattgcatacagattaaagaatggaataaagtagtcaaatgtcataacaattttac 44453283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 368
Target Start/End: Complemental strand, 5723126 - 5723009
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||| |||||||| ||||||||  ||||||||| ||||||||||||| |||||||||   ||       |||||||||||||||||    
T  5723126 aagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagtttgagtatttattgagggtaaagttaggag-aaaaaattaaagttgtattgaaa 5723030  T
Q  348 atgtaaagtgacgtttatttt 368  Q
    |||||||||||| || |||||    
T  5723029 atgtaaagtgacattcatttt 5723009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 257 - 372
Target Start/End: Original strand, 19920310 - 19920423
Alignment:
Q  257 ttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagt 356  Q
    ||||||||| |||||||| |||| ||||  |||||||| ||||||||||||| ||||||||||| ||       |||||||||||||| |||||||||||    
T  19920310 ttaaagttgcattgaaaattgtgcgaga--gaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagt 19920407  T
Q  357 gacgtttattttaaaa 372  Q
    ||| || |||||||||    
T  19920408 gacattcattttaaaa 19920423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 35778060 - 35777969
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  35778060 tactctctccgttttaaaatgagtatcgctttagctaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 35777969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 13405034 - 13405128
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||  ||||||||||||||||| ||| |||| ||||||||||||| ||||| ||| | |||||| ||||||||| || ||||||||||||    
T  13405034 tattactccttctgttttaaaatgagtgtcgttttaaccaattgcacacatattaagaaatgaaataaagtagtcaaatgtcgtagcaattttac 13405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 23935652 - 23935571
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| |||||||| ||||||| || || |||||| || |||||||| ||||||||| |||||||||||||||    
T  23935652 gttttaaaatgagtgtcgctttacccaattgtacccacattaaagaatggaataaagtagtcaaatgtcatagcaattttac 23935571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 29530855 - 29530936
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  ||   |||||| ||||||||| |||||||||||||||    
T  29530855 gttttaaaatgagtgtcgatttagccaattgcacacagattaaggaataaaataaagtagtcaaatgtcatagcaattttac 29530936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 27947410 - 27947506
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 226  Q
    |||||| ||| |||| ||||||||| || ||||| ||||||||||||| |||||  ||  ||||||| ||||||||| |||||||||||||||||||    
T  27947410 ttactccatccgtttcaaaatgagtgtcactttaaccaattgcacacatattaatgaattgaataaagtagtcaaatgtcatagcaattttactaaa 27947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 19277055 - 19277110
Alignment:
Q  229 aaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    |||||||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  19277055 aaccttactttatatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 19277110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 48684967 - 48684860
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    ||||||||  || |||||||||||||| ||||||||  ||||||||||||||||||  || | |||||| ||||||||| ||||| ||||||||| |||     
T  48684967 tattactccctcagttttaaaatgagtgtcgctttaatcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcataacaattttaccaaat 48684868  T
Q  228 taacctta 235  Q
    || |||||    
T  48684867 tatcctta 48684860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 16564723 - 16564801
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattt 219  Q
    |||||||||||||| |||||||| ||||||||| |||||||||  || | |||||| ||||||||| ||||||||||||    
T  16564723 gttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 16564801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 16600939 - 16600861
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattt 219  Q
    |||||||||||||| |||||||| ||||||||| |||||||||  || | |||||| ||||||||| ||||||||||||    
T  16600939 gttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 16600861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 375
Target Start/End: Complemental strand, 17869376 - 17869236
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnntt 332  Q
    |||||||| | ||| || ||||||||||||||| |||||||| ||||||||  ||||||| | ||||||||||||| | |||||||| |||       ||    
T  17869376 ttactttataagaaaaatacaaacttaaagttgcattgaaaattgtgtgag--agaaaagattgagtatttattgaggataaagttggaaggaaaaaatt 17869279  T
Q  333 aaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||| |||| ||||||||| |||| || ||||| ||||||    
T  17869278 aaagttgcattggaaatgtaaaatgacattcattttgaaacaa 17869236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 19276543 - 19276636
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    ||||| ||| ||||||||||||||||||||||||||||  || | | |||| ||||||||| | ||||||| |||||| ||||||||||||||||    
T  19276543 aaaatcagtgtcgctttagccaattgcacacagattaaggaatgaagtaaagtagtcaaatgttatagcaa-tttacttaaataaccttacttta 19276636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 36915610 - 36915504
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    |||||| || |||||||||||||| ||| |||||||| || |||| |||||||  || | ||| |  |||||||||||||||||||||||||| |||||     
T  36915610 tactctctccgttttaaaatgagtgtcgttttagccattttcacatagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaatag 36915511  T
Q  231 ccttact 237  Q
    |||||||    
T  36915510 ccttact 36915504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 34733464 - 34733374
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaagg 311  Q
    |||||||||| || |||||||||| | ||| |||||||||||||||||| |||||||| |||    || |||||| |||||||||||||||||||    
T  34733464 ttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgt----gagagaaaaattggagtatttattgaagg 34733374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 298
Target Start/End: Complemental strand, 42121768 - 42121618
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||| ||||||||||||||||||||||||||||  || | ||| ||||| |||     |||| || |||||||||| | |||||||||||   ||    
T  42121768 aaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactgaccttactttattaga 42121669  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggag 298  Q
    | |||| | ||||||||||| |||||||| ||| ||||  |||||||||||||    
T  42121668 aaaagatacacttaaagttgcattgaaaattgtttgag--agaaaagttggag 42121618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 7795152 - 7795244
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| ||| |||| ||||||||| |||||||||||||||| ||||| |||||  || | |||||| |||| |||| |||||||||||||||    
T  7795152 ttactccatccgtttcaaaatgagtgtcgctttagccaattgtacacaaattaaggaatgaaataaagtagtaaaatgtcatagcaattttac 7795244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 10599604 - 10599513
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| || |||||||||||||| ||| ||||  |||||||||| | |||||  || |||||||| ||||||||| |||||||||||||||    
T  10599604 tactctctccgttttaaaatgagtgtcgttttaatcaattgcacatatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 10599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 27936008 - 27935917
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||| ||||||||| ||||||||||||| ||||||||||||||  ||  ||||||| ||||||||  ||||| |||||||||    
T  27936008 tactccatccgtttcaaaatgagtgtcgctttagccaactgcacacagattaaggaattgaataaagtagtcaaaagtcataacaattttac 27935917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 375
Target Start/End: Original strand, 28044139 - 28044286
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| |||||||||||||||||| |||||||||  ||||| ||||||         | | |||||    
T  28044139 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgtgtgaga--gaaaaattggag---------aggataaag 28044227  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       ||||||||||||||||||||||||||||| || ||||||||||||    
T  28044228 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 28044286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 31418433 - 31418511
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattt 219  Q
    |||||||||| ||| ||||||||  |||||||||| | ||||| ||| |||||||| ||||||||| ||||||||||||    
T  31418433 gttttaaaataagtgtcgctttaatcaattgcacatatattaagaaatggaataaagtagtcaaatgtcatagcaattt 31418511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 22298235 - 22298146
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaa-----taaaatagtcaaatatcatagcaattttac 222  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||  || ||||     |||| ||||||||| |||||||||||||||    
T  22298235 tctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatggaataaagtaaagtagtcaaatgtcatagcaattttac 22298146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 375
Target Start/End: Complemental strand, 18733585 - 18733452
Alignment:
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn--ttaaagttg 339  Q
    ||||| |||||||| ||||||||| |||||||  ||||||||| | |||  |||||||||||||||| |||| ||||  |||         |||||||||    
T  18733585 atgaaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaaaaa--ttggagtatttattgagggtagagttcgaagaaaaaaaaattaaagttg 18733488  T
Q  340 tattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||| || ||||| ||||||    
T  18733487 tattgaaaatgtaaagtgacattcattttgaaacaa 18733452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 33845439 - 33845508
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
    |||||||||||||||||| |||||||| |||| |||  | ||||||||||||| ||||||| ||||||||||    
T  33845439 aagacaaacttaaagttgcattgaaaattgtgcgag--aaaaaagttggagtaattattgagggtaaagttg 33845508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 41137954 - 41137878
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| ||  |||||  ||||||||| | ||||||||| |||||||| ||||||||| |||||||||||||||    
T  41137954 aaaatgagtgtcattttagtgaattgcacatatattaaaaaatggaataaagtagtcaaatgtcatagcaattttac 41137878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 312
Target Start/End: Complemental strand, 47272362 - 47272213
Alignment:
Q  161 ttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaa 260  Q
    |||||||||||||||||||||||| || | |||  ||||  ||   | |||| ||||||||||||| |  ||||  |||| ||||| ||||||||| |||    
T  47272362 ttagccaattgcacacagattaaagaatgaaatggaataaccattaaacataacaattttactaaactgcccttgttttatatgaaaaagacaaacataa 47272263  T
Q  261 agttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggt 312  Q
    | ||| |||||||| ||||||||    |||||||| ||||||||||||||||    
T  47272262 aattgcattgaaaattgtgtgag--gaaaaagttgaagtatttattgaaggt 47272213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 8334214 - 8334293
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttt 220  Q
    |||||||| || || ||| ||| |||||||||||||||||||| ||| | |||||| ||||||||| ||||| |||||||    
T  8334214 gttttaaattgtgtgtcgttttcgccaattgcacacagattaagaaatgtaataaagtagtcaaatgtcataacaatttt 8334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 368
Target Start/End: Original strand, 19288403 - 19288495
Alignment:
Q  276 tgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||  |||       |||||||||||||  |||||||||||||| || |||||    
T  19288403 tgtgtgagagagaaaagttggagaatttattgagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 19288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 48838714 - 48838774
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaag 310  Q
    |||||||| ||||||||| |||||||| |||||||||  |||||||| |||||||||||||||    
T  48838714 aagacaaatttaaagttgcattgaaaattgtgtgaga--gaaaagtttgagtatttattgaag 48838774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 40805067 - 40805026
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  40805067 ttaaagttgtattgtaaatgtaaagtgacatttattttaaaa 40805026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 45948550 - 45948631
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||| ||||| ||||  |||||| ||||  |||  ||||||| ||||||||| |||||||||||||||    
T  45948550 gttttaaaatgagtgtcgttttagtcaatcacacacatattacgaaatagaataaagtagtcaaatgtcatagcaattttac 45948631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 18886712 - 18886668
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  18886712 ttaaagttgtattgaaaatgtaaagtgagattcattttaaaacaa 18886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 22597273 - 22597229
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||    
T  22597273 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 22597229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 22627383 - 22627431
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggag 298  Q
    |||||||||||||||||| |||||||| ||||||||  |||||||||||||    
T  22627383 aagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagttggag 22627431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 40339702 - 40339647
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    |||||||| ||| ||||||||||  || ||| ||||||||||||||||||||||||    
T  40339702 tattactccatccgttttaaaatatgtgtcgttttagccaattgcacacagattaa 40339647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 5723229 - 5723175
Alignment:
Q  129 attactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||||| ||| |||||||||||||| ||| ||||| |||||||||||| |||||    
T  5723229 attactccatccgttttaaaatgagtgtcgttttagtcaattgcacacaaattaa 5723175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 36447712 - 36447756
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| ||||||||  || ||||||||||||    
T  36447712 ttaaagttgtattgaaaatataaagtgatattcattttaaaacaa 36447756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 40207299 - 40207351
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||| ||| |||| ||||||||| | |||||||||||||||||||| |||||    
T  40207299 tactccatccgtttcaaaatgagtgttgctttagccaattgcacacatattaa 40207351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 43813455 - 43813499
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||| ||||||||| || ||||||||||||    
T  43813455 ttaaagttgtattggaaatataaagtgacattcattttaaaacaa 43813499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 48838776 - 48838820
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||| |||||||||| |||| |||| |||||||||||||||    
T  48838776 ttaaagttatattgaaaatataaattgacatttattttaaaacaa 48838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 5e-67; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 34124524 - 34124290
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  34124524 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 34124425  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| || |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||| |||       |||||||||     
T  34124424 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 34124325  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||| ||| || ||||||||||||    
T  34124324 attgaaaatgtaaagcgacattcattttaaaacaa 34124290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 47321374 - 47321139
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47321374 gttttaaaatgagtgtcgttttagccaattgcacacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttacttta 47321275  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaagttg 339  Q
     | ||| ||||||| |||||||||| |||||||| |||| |||  ||||||||| ||||||||||||| |||||||||| |||        |||||||||    
T  47321274 taagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaagaaaaaaaattaaagttg 47321175  T
Q  340 tattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||| || ||||||||||||    
T  47321174 tattgaaaatgtaaagtgacattcattttaaaacaa 47321139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 128 - 353
Target Start/End: Complemental strand, 45889805 - 45889580
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    |||||||||||| |||| ||||||||| ||| |||||||||||||||||| |||||  || | |||||| ||||||||| | ||||||||||||||||||    
T  45889805 tattactctatccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgttatagcaattttactaaaa 45889706  T
Q  228 taaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnn 327  Q
    ||||||||||||| | ||| || ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||| | |||        
T  45889705 taaccttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaagaaaa 45889606  T
Q  328 nnnttaaagttgtattgaaaatgtaa 353  Q
       |||||||||||||||||||||||    
T  45889605 aagttaaagttgtattgaaaatgtaa 45889580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 31941784 - 31941553
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||||||||||||  || ||   | || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  31941784 gtttcaaaatgagtgtcgctttagccaattgcatgcaaat---agaatggaataaagtagtcaaatgtcatagcaattttattaaaataaccttacttta 31941688  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | |||||||||||||||||||||| |||||||| | ||||||| |||| |||||||||||||||||| |||||||||| |||       ||||||||||    
T  31941687 taagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 31941588  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| || ||||||||||||    
T  31941587 attgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 24259840 - 24259606
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| |||||||| ||||||||||| | |||||  || | |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  24259840 gttttaaaatgagtgtcgctttatccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 24259741  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| | |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||       |||||||||     
T  24259740 taagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 24259641  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||||||||| || ||||| ||||||    
T  24259640 attggaaatgtaaagtgacattcattttgaaacaa 24259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 131 - 375
Target Start/End: Original strand, 19282323 - 19282567
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||  || |||||||| ||||||||| ||||| |||||||||||||||||    
T  19282323 tactcgatccgttttaaaatgagcgtcgctttagccaattgcacacggattaaggaatggaataaagtagtcaaatgtcataacaattttactaaaataa 19282422  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnn 329  Q
    |||||||||| |  ||||||||||||||||| |||||||  ||| ||||||||| ||||||||| |||||||||||||||||||||||| |||           
T  19282423 ccttactttata-aaacaagacaaacttaaaattgtattagaaattgtgtgagagagaaaagttagagtatttattgaaggtaaagttggaagaaaaaaa 19282521  T
Q  330 nttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
     |||||||||||||| |||||||||||||| || ||||| ||||||    
T  19282522 attaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 19282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 131 - 368
Target Start/End: Complemental strand, 28116484 - 28116247
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| ||| |||| ||||||||| || ||||| |||||||||||| ||||||  || |||||||| ||||||||| |||||||||||||||||||||||    
T  28116484 tactccatccgtttcaaaatgagtgtcactttaaccaattgcacacggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataa 28116385  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||||||||| | ||| |||||||||||||||||  | |||||| |||||| || ||||||||| ||||||||||| | |||||||||| |||           
T  28116384 ccttactttataagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtatttattaagggtaaagttggaagaaaaaaa 28116285  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  28116284 ttaaagttgtattggaaatgtaaagtgacatttatttt 28116247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 131 - 375
Target Start/End: Original strand, 17499630 - 17499874
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    |||||| || |||||||||||||| ||| ||||| ||||||||||||||||||  || | |||||||||||||||| ||||| |||||||||||||||||    
T  17499630 tactctctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaatgaatgaaataaaatagtcaaatgtcataacaattttactaaaataa 17499729  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    | |||||||| | ||| |||||||||||||||||| |||||||| ||| ||||| ||||||||| ||||||||||||| |||||||||| |||           
T  17499730 cattactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaa 17499829  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||| ||| |||| |||||||||| ||| || ||||| ||||||    
T  17499830 ttaaaattgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 131 - 375
Target Start/End: Complemental strand, 6462253 - 6462004
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| ||| |||| ||||||||  ||| |||||||||||||||||||||||| ||| | |||||| ||||||||| |||||||||||| ||||||||||    
T  6462253 tactccatccgtttcaaaatgagggtcgttttagccaattgcacacagattaagaaaagtaataaagtagtcaaatttcatagcaatttgactaaaataa 6462154  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacag--aaaagttggagtatttatt---gaaggtaaagttgaaagnn 325  Q
    |||||||||| | |||||| ||||||||||||||| |||||| | ||||||| | ||  ||||||| |||||||||||   || |||||||||| |||      
T  6462153 ccttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtgaaatagataaaagtttgagtatttattgaggagggtaaagttggaagaa 6462054  T
Q  326 nnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
         |||||||||||||| |||||||||| ||| || ||||| ||||||    
T  6462053 aaaaattaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 51434180 - 51434414
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||| | |||||||| ||||||||| | | |||||  || |||||||| ||||||||| ||||| |||||||| ||||||||||||||||||    
T  51434180 gttttaaaatgaatgtcgctttaaccaattgcatatatattaaggaatggaataaagtagtcaaatttcataacaattttattaaaataaccttacttta 51434279  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| ||||| ||||| |||||| |||||||| ||||||||| |||||||||  |||||||||||| |||||||||  |||       |||||||||     
T  51434280 taagaaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagtatttattgagggtaaagtttgaaggaaaaaattaaagttgc 51434379  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||  |||||||||| ||| || ||||||||||||    
T  51434380 attagaaatgtaaagcgacattcattttaaaacaa 51434414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 131 - 373
Target Start/End: Complemental strand, 55126736 - 55126494
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| ||| |||||||||||| | ||| ||||||||||||||||  ||||||  || | |||||| ||||||||| |||||||||||||||||||||||    
T  55126736 tactccatccgttttaaaatgaatgtcgttttagccaattgcacattgattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataa 55126637  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||||||||| | ||| |||||||||||||||||| |  ||||| |||||  || ||||||||| |||||||| || | |||| ||||  |||           
T  55126636 ccttactttataagaataagacaaacttaaagttgcaaggaaaattgtgtaggagagaaaagttagagtatttttttagggtagagttagaagagaaaaa 55126537  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaac 373  Q
    ||||||||||||||||||| |||| |||| || ||||||||||    
T  55126536 ttaaagttgtattgaaaatttaaaatgacattcattttaaaac 55126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 54234045 - 54233902
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||||| ||| ||||| ||| |||||||| || |||||||||||| ||||||||||||||||| |||||||||    
T  54234045 gtttcaaaatgagtgtcgctttagccaattgcatacaaattaagaaatggaataaagtactcaaatatcatatcaattttactaaaataagcttacttta 54233946  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
     | ||| |||||||||||||||||| |||||||| |||||||||    
T  54233945 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 54233902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 141 - 317
Target Start/End: Original strand, 4408100 - 4408276
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||| | |||||||| | ||||||||| | |||||  || | |||||| ||||||| | ||||| |||||||||||||||||||||||| ||    
T  4408100 gtttcaaaatgaatgtcgctttaactaattgcacataaattaaggaatgaaataaagtagtcaagtgtcataacaattttactaaaataaccttactata 4408199  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagt 317  Q
     | ||| |||||||||||||| ||| |||||||| ||||||||| ||||||||| ||| ||||||||| | ||||||    
T  4408200 taagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagcatttattgaggttaaagt 4408276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 19849235 - 19849079
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  ||| |||||| | ||| || ||||||||||||||| |||||||| |||||||||  |||||||||||||||||||||| |||||||    
T  19849235 ttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttattgagggtaaag 19849138  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       |||||||||||||| || ||||||||||  || ||||||||||||    
T  19849137 ttggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 142 - 375
Target Start/End: Complemental strand, 30022293 - 30022063
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaa-atatcatagcaattttactaaaataaccttacttta 240  Q
    ||||||||||||| ||| |||||| ||||||||| |||||||  || | ||||||||| |||  |||| ||| || |||||||||| || ||||  | ||    
T  30022293 ttttaaaatgagtgtcgttttagcaaattgcacatagattaaggaatgaaataaaataatcattatat-ataacacttttactaaacta-ccttcttgta 30022196  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| |||||||||| ||||||| |||||||| |||||||||  ||||||||| |||||||||||| |||||||||| |||       ||||||||||    
T  30022195 taagaaaaagacaaactcaaagttgcattgaaaattgtgtgaga--gaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 30022098  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||| |||| || || ||||| ||||||    
T  30022097 attggaaatgtcaagtaacattcattttgaaacaa 30022063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 141 - 322
Target Start/End: Complemental strand, 34096243 - 34096064
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    ||||||| |||||| ||| ||||| |||||||||||| ||||||||| | ||| ||||| |||     | || || |||||||||| |  ||||||||||    
T  34096243 gttttaagatgagtgtcgttttaggcaattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgcccttacttta 34096144  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaa 322  Q
     | ||| |||||||||||||||||  |||||||| ||||||||  ||||||||| || |||||||||| |||||||||||||    
T  34096143 taagaaaaagacaaacttaaagtttcattgaaaattgtgtgag--agaaaagtttgaatatttattgagggtaaagttgaaa 34096064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 27653909 - 27653824
Alignment:
Q  137 atctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  27653909 atctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatggaataaagtagtcaaatgtcatagcaattttac 27653824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 52957716 - 52957797
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| ||||||||||||||||||||||||||||  || |||||||| ||||||||| |||||||||||||||    
T  52957716 gtttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatggaataaagtagtcaaatgtcatagcaattttac 52957797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 252 - 375
Target Start/End: Complemental strand, 22212457 - 22212336
Alignment:
Q  252 caaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgt 351  Q
    ||||||||||||||||||||||| ||||||||  | ||| ||||||||||||||||| |||||||||| |||       |||||||| ||||| ||||||    
T  22212457 caaacttaaagttgtattgaaaattgtgtgag--aaaaatgttggagtatttattgagggtaaagttggaagaaaaaaattaaagttatattggaaatgt 22212360  T
Q  352 aaagtgacgtttattttaaaacaa 375  Q
    || ||||| || ||||||||||||    
T  22212359 aaggtgacattcattttaaaacaa 22212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 54092078 - 54091953
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||| |||||||||||| | || ||||  |||||||||||||||||||||| ||||||||||| ||       ||||||||||||| |||    
T  54092078 aagacaaacttaaaattgtattgaaaattatgcgaga--gaaaagttggagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattaaaa 54091981  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    || |||| |||| || ||||||||||||    
T  54091980 atctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 44855395 - 44855245
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | | | |||||||| ||||||||| |||||||| |||||||||  ||||||||||| |||||||||| |||||||    
T  44855395 ttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttggattatttattgagggtaaag 44855298  T
Q  317 --ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattt 367  Q
      ||| |||       |||||||||||||| |||||||||||||| |||||||    
T  44855297 aattggaagagaaaacttaaagttgtattggaaatgtaaagtgacatttattt 44855245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 248 - 372
Target Start/End: Complemental strand, 31987424 - 31987302
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||| ||||||||| |||||||| | || ||||  |||||||||||||||||||||| |||||||||| |||       |||||||||||||  ||    
T  31987424 aagacaaatttaaagttgcattgaaaattatgcgaga--gaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattagaa 31987327  T
Q  348 atgtaaagtgacgtttattttaaaa 372  Q
    |||||||||||| || |||||||||    
T  31987326 atgtaaagtgacattcattttaaaa 31987302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 6510238 - 6510113
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||| ||  ||| |||| ||||| |||  |||||| ||||||||||||||| ||||||||||| ||       |||||||||||||||||    
T  6510238 aagacaaacttaaaattacattaaaaattgtgtaaga--gaaaaggtggagtatttattgagggtaaagttgagagaaaaaagttaaagttgtattgaaa 6510141  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    || ||||||||| |||||||| ||||||    
T  6510140 atataaagtgacatttattttgaaacaa 6510113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 54042098 - 54042189
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacaca-gattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||||||||  ||||| ||| |||||||||||||||||| || |||||||||||    
T  54042098 tactccatccgttttaaaatgagtgtcgttttagccaattgcacacataattaagaaatggaataaaatagtcaaatgtcgtagcaatttta 54042189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 137 - 375
Target Start/End: Original strand, 55548139 - 55548380
Alignment:
Q  137 atctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttac 236  Q
    |||||||| ||||||||||||| |||| ||||||| ||  | |  ||  || | |||||||||||||||| | ||| ||||||||||||||||  |||||    
T  55548139 atctgtttcaaaatgagtatcgttttaaccaattgtacctataacaaggaatgaaataaaatagtcaaatgttataacaattttactaaaatagtcttac 55548238  T
Q  237 tttacatgaacaagacaaacttaaagttgtattgaaaa--gtgtgtgagacagaaaagttggag--tatttattgaaggtaaagttgaaagnnnnnnntt 332  Q
    ||||  |||  |||||||||||||||||| |||| |||  ||| | |||| |||||| ||| ||  |||||||||| || ||||||| ||        ||    
T  55548239 tttatttgacaaagacaaacttaaagttgcattggaaattgtgagagagagagaaaaattgaagtatatttattgagggcaaagttggaa-aaagaaatt 55548337  T
Q  333 aaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||| |||||||||||||||||||  ||||||| ||||||    
T  55548338 aaagttgcattgaaaatgtaaagtgacacttattttgaaacaa 55548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 359
Target Start/End: Complemental strand, 30492849 - 30492739
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||| ||| |||| | ||||  | ||||||||||||||||||||||| ||||||||||  ||       |||||||||||||||||    
T  30492849 aagacaaacttaaagttgcattaaaaaat-tgtgcaagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaa 30492751  T
Q  348 atgtaaagtgac 359  Q
    ||||||||||||    
T  30492750 atgtaaagtgac 30492739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 36805373 - 36805518
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttact 237  Q
    ||||||||||||||||| ||| |||| | |||||||||||||||||  || | ||| ||||| |||     |||| || |||||||||| |  ||||| |    
T  36805373 tctgttttaaaatgagtgtcgtttta-ctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgtccttagt 36805471  T
Q  238 ttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    ||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  36805472 ttatatgaaaaagacaaacttaaagttgtattgaaaattgtgtgaga 36805518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 1819793 - 1819712
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||| | ||||||||| |||||| |||||||||||| || | |||||| ||||||||| |||||||||||||||    
T  1819793 gttttaaaatgaatgtcgctttagtcaattgaacacagattaaagaatgaaataaagtagtcaaatgtcatagcaattttac 1819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 29519451 - 29519532
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||| ||||||||||| |||||| |||||  || | |||||||||||||||||||||| |||||||||    
T  29519451 gttttaaaatgagtgtcgttttagccaattacacacatattaaggaatgaaataaaatagtcaaatatcataacaattttac 29519532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 42605803 - 42605722
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||  ||| ||||| ||||||||||||||||||| ||   |||||||||||||||| |||||||||||||||    
T  42605803 gttttaaaatgagcgtcgttttagtcaattgcacacagattaaagaataaaataaaatagtcaaatgtcatagcaattttac 42605722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 52847980 - 52848061
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| | | |||||||||||||| ||||||||| |||  ||||||| ||||||||| |||||||||||||||    
T  52847980 gttttaaaatgagtgttgttttagccaattgcatacagattaagaaattgaataaagtagtcaaatgtcatagcaattttac 52848061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 248 - 372
Target Start/End: Original strand, 29289923 - 29290044
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||| ||| |||||||| ||||||||  |||||||||| ||||||||||| ||||||||||  |||       || ||||||||||||||    
T  29289923 aagacaaacttaaaattgcattgaaaattgtgtgag--agaaaagttgaagtatttattg-aggtaaagtttgaagaaaaaaattgaagttgtattgaaa 29290019  T
Q  348 atgtaaagtgacgtttattttaaaa 372  Q
    || ||||||||| || |||||||||    
T  29290020 atataaagtgacattaattttaaaa 29290044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 291
Target Start/End: Original strand, 34534035 - 34534166
Alignment:
Q  160 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaactt- 258  Q
    |||||| |||||||| ||||||||  ||  ||||||| || |||||| ||||||||||||||||||||||||| |  |||| | ||| |||||||||||     
T  34534035 tttagctaattgcactcagattaaggaattgaataaagtaatcaaatgtcatagcaattttactaaaataacc-tcttttataagaaaaagacaaactta 34534133  T
Q  259 aaagttgtattgaaaagtgtgtgagacagaaaa 291  Q
    ||||||| |||||||| ||||||| | ||||||    
T  34534134 aaagttgcattgaaaattgtgtgaaagagaaaa 34534166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 39985048 - 39984968
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    |||| ||||||||| |||||||||||||||||| ||| |||||  ||  ||||||||||||||||| ||||||||||||||    
T  39985048 gtttcaaaatgagtgtcgctttagccaattgcatacatattaaggaattgaataaaatagtcaaatgtcatagcaatttta 39984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 2728314 - 2728405
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||||| |||||  ||  ||||||| ||||||||| ||||| |||||||||    
T  2728314 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaattgaataaagtagtcaaatgtcataacaattttac 2728405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 235 - 375
Target Start/End: Complemental strand, 35928622 - 35928486
Alignment:
Q  235 actttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaa 334  Q
    |||||| | ||| |||| ||||||||| ||| |||||||| ||||    | ||||| |||| |||||||||||| |||||||||| |||       ||||    
T  35928622 actttataagaaaaagataaacttaaaattgcattgaaaattgtg----aaagaaacgttgcagtatttattgagggtaaagttggaagaaaaaaattaa 35928527  T
Q  335 agttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||  |||||||| ||||||    
T  35928526 agttgtattgaaaatgtaaagtgatatttattttgaaacaa 35928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 37445811 - 37445655
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| ||||||||| ||| |||| | ||||| |  ||||| || || |||||||||| |||||||    
T  37445811 ttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaa--gaaaaatttgaatatttattgagggtaaag 37445714  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       ||||||||||||| |||||||||| |||| || ||||||||||||    
T  37445713 ttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 37654641 - 37654560
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| ||| |||||||||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  37654641 gtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 37654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 38991689 - 38991770
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||| ||||| |||||||||||||||||| ||| | |||||| |||| |||| ||||| |||||||||    
T  38991689 gttttaaaatgagtgtcgttttagtcaattgcacacagattaagaaatgtaataaagtagttaaatgtcataacaattttac 38991770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 40345273 - 40345354
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||| | |||||||||||||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  40345273 gttttaaaatgaatgtcgctttagccaattgcacacaaattaatgaatgaaataaagtagtcaaatgtcatatcaattttac 40345354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 2493344 - 2493252
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| ||| |||| ||||||||| ||| ||| |||||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  2493344 ttactccatccgtttcaaaatgagtgtcgtttttgccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 2493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 45520473 - 45520611
Alignment:
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||||| ||| | ||| |||||||||||||||||| ||| |||| ||| |||||  |||||||| ||||||||||  | | |||||||| |||           
T  45520473 ccttacattataagaataagacaaacttaaagttgcattaaaaattgtatgaga--gaaaagtttgagtatttatcaaggataaagttggaagaaaaaa- 45520569  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  45520570 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaa 45520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 42672540 - 42672440
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| ||  | ||||||| | ||| |||||||| |||||||||||||||||| ||||| ||  ||| |||||| |||||||||||| |||||||    
T  42672540 ttttactaaactactcatactttataagaaaaagacaaatttaaagttgtattgaaaattgtgtaag--agagaagttgaagtatttattgagggtaaag 42672443  T
Q  317 ttg 319  Q
    |||    
T  42672442 ttg 42672440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 53814413 - 53814504
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||||||||||||| ||| |||| ||||| ||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  53814413 tactccatccgttttaaaatgagtgtcgttttaaccaatcgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 53814504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 368
Target Start/End: Complemental strand, 11835225 - 11835109
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||| ||||||||||||| |||||||| ||||||||| |    || | |||||||||||||||||||| |||||||       |||||||| |||| |||    
T  11835225 aagataaacttaaagttgcattgaaaattgtgtgagaga----aggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaa 11835130  T
Q  348 atgtaaagtgacgtttatttt 368  Q
    |||||||||||| || |||||    
T  11835129 atgtaaagtgacattcatttt 11835109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 298
Target Start/End: Complemental strand, 34360156 - 34360077
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggag 298  Q
    |||||||||| |  |||||||||| | ||| |||||||||||||||||| |||||||| ||||||||  |||||||||||||    
T  34360156 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagttggag 34360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 18430220 - 18430139
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| | |||||||||||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  18430220 gtttcaaaatgagtgttgctttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 18430139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 24941111 - 24941030
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| ||| |||| |||||||||||||  ||||| || |||||||| ||||||||| ||||| |||||||||    
T  24941111 gtttcaaaatgagtgtcgttttaaccaattgcacacatgttaaagaatggaataaagtagtcaaatgtcataacaattttac 24941030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 20448278 - 20448189
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| ||||||| |||||| ||  ||||||||||||||||||||| |||||  ||  ||||||| |||| |||| |||||||||||||||    
T  20448278 tactctctctgtttcaaaatgtgt--cgctttagccaattgcacacatattaaggaattgaataaagtagttaaatgtcatagcaattttac 20448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 44571792 - 44571872
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||||| || ||||| ||||||||| ||| |||||  || | |||||||||||||||| |||||| ||||||||    
T  44571792 ttttaaaatgagtgtctctttaaccaattgcaaacatattaatgaatgaaataaaatagtcaaatgtcatagtaattttac 44571872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 49089693 - 49089609
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 226  Q
    ||||||||||||| ||| ||||  |||||||||||| |||||  || | |||||  ||||||||||||||| |||||||||||||    
T  49089693 ttttaaaatgagtgtcgttttaatcaattgcacacatattaaggaatgaaataatgtagtcaaatatcataacaattttactaaa 49089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 45043504 - 45043595
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| ||||||| ||||| ||| ||| ||||| ||||||||||||  ||||  || | |||||| ||||||||| |||||||||||||||    
T  45043504 tactctctctgtttcaaaataagtgtcgttttagtcaattgcacacattttaaggaatgtaataaagtagtcaaatgtcatagcaattttac 45043595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 56373491 - 56373582
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||| ||||||||| || ||||||||||||| | ||| |||||  || |||||||| ||||||||| || ||||||||||||    
T  56373491 tactccatccgtttcaaaatgagtgtcactttagccaattgaagacatattaaggaatggaataaagtagtcaaatgtcgtagcaattttac 56373582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 34316464 - 34316386
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaat 206  Q
    ||||||||  || |||| ||||||||| || ||||| |||||||||||||||||||  || | ||||||||||||||||    
T  34316464 tattactcactccgtttcaaaatgagtgtcactttaaccaattgcacacagattaaggaatgaaataaaatagtcaaat 34316386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 56556204 - 56556246
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  56556204 gttttaaaatgagtgtcgctttaaccaattgcacacagattaa 56556246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 17317893 - 17317947
Alignment:
Q  267 attgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag 323  Q
    |||||||| ||||||||| |  |||||| ||||||||||||||||||||||||||||    
T  17317893 attgaaaattgtgtgagata--aaagtttgagtatttattgaaggtaaagttgaaag 17317947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 19878879 - 19878798
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||| | ||||||||||||||||| || |||||||  || |||||||| || |||||| || ||||||||||||    
T  19878879 gtttcaaaatgaatgtcgctttagccaattgcgcagagattaaggaatggaataaagtaatcaaatgtcgtagcaattttac 19878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 29840160 - 29840070
Alignment:
Q  286 agaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||| ||||||||||  ||        |||||||||||||| |||||||||||||| || ||||| ||||||    
T  29840160 agaaaagttggagtatttattgagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29840070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 40010798 - 40010879
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| ||| ||||| | ||| |||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  40010798 gtttcaaaatgagtgtcgttttagtccattacacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 40010879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 6232147 - 6232191
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||    
T  6232147 ttaaagttgtattgaaaatgtaaattgacatttattttgaaacaa 6232191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 21045195 - 21045151
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||    
T  21045195 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 21045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 38761892 - 38761964
Alignment:
Q  286 agaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgac 359  Q
    ||||||||||||||||||||||| | |||||||||||        ||||||||| |||||||||||||||||||    
T  38761892 agaaaagttggagtatttattgaggttaaagttgaaa-aaataaattaaagttgaattgaaaatgtaaagtgac 38761964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 50072320 - 50072276
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||    
T  50072320 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 50072276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 52732638 - 52732594
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| || ||||||||||||    
T  52732638 ttaaagttgtattggaaatgtaaagtgacattcattttaaaacaa 52732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 28734824 - 28734749
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    ||||||||| |||||||| ||||||||||| | |||||| ||  ||||||| ||||||||| |||||  |||||||    
T  28734824 aaaatgagtgtcgctttaaccaattgcacatatattaaagaattgaataaagtagtcaaatgtcataataatttta 28734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 22212580 - 22212526
Alignment:
Q  129 attactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||||| ||| ||||||||||| || |||||||||||||||| ||||| |||||    
T  22212580 attactccatccgttttaaaatgggtgtcgctttagccaattgaacacatattaa 22212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 29370815 - 29370753
Alignment:
Q  160 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| |||||||||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  29370815 tttagtcaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 29370753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 39671108 - 39671174
Alignment:
Q  218 tttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    ||||||||| || | |||||||| | ||| || ||||||||||||||| |||||||| |||||||||    
T  39671108 tttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgaga 39671174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 45903518 - 45903555
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||||||||||||||||||||||| || |||||    
T  45903518 ttaaagttgtattgaaaatgtaaagtgacattcatttt 45903555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 49080403 - 49080484
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||| ||| |||||||| ||||||||||||| |||||  ||   |||||| ||||||||| |||||| ||||||||    
T  49080403 gtttcaaaataagtgtcgctttatccaattgcacacatattaaggaataaaataaagtagtcaaatgtcatagtaattttac 49080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 1868211 - 1868255
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| ||||||||||||||||||| || ||||| ||||||    
T  1868211 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 1868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 15501258 - 15501302
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| || ||||| ||||||    
T  15501258 ttaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 38692453 - 38692409
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||    
T  38692453 ttaaagtttaattgaaaatgtaaagtgacattcattttaaaacaa 38692409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 50623315 - 50623235
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    |||||||||||||| ||| ||||| ||||| |||||| |||||  || | |||| | ||||||||| ||||| ||||||||    
T  50623315 gttttaaaatgagtgtcgttttagtcaattacacacatattaaggaatgaaatagagtagtcaaatgtcatatcaatttta 50623235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 56556366 - 56556410
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| || ||||| ||||||    
T  56556366 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 2e-66; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 141 - 373
Target Start/End: Original strand, 34461504 - 34461737
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||| |||||||||||  || | |||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  34461504 gtttcaaaatgagtgtcgctttagccaattgtacacagattaaggaatgaaataaaatagtcaaatgtcataacaattttactaaaataatcttacttta 34461603  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaagttg 339  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||||||||| |||        |||||||||    
T  34461604 catgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaagaaaaaaaattaaagttg 34461703  T
Q  340 tattgaaaatgtaaagtgacgtttattttaaaac 373  Q
    ||||| |||||||||||||| || ||||| ||||    
T  34461704 tattggaaatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 142 - 375
Target Start/End: Original strand, 14541669 - 14541900
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||||||  |||||||||||||| |||||||||| || |||||||| ||||||||| ||||| |||||||||||||||||||||||||||     
T  14541669 ttttaaaatgagtatcattttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttat 14541768  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgta 341  Q
    | |||||||||||||||||||||| ||||||||   ||||||| |||||||||| |||||||||| | | |||||||| |||       |||||||||||    
T  14541769 aagaacaagacaaacttaaagttgcattgaaaa--ttgtgagagagaaaagttgaagtatttattaaggataaagttggaagaaaaaaattaaagttgta 14541866  T
Q  342 ttgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||  |||||||||||||| || ||||| ||||||    
T  14541867 ttagaaatgtaaagtgacattcattttgaaacaa 14541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 142 - 372
Target Start/End: Original strand, 18673022 - 18673251
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| ||||| ||||||||| |||||| ||||| ||| | |||||| ||||||||| ||||| |||||||||||||||||||||||||  |    
T  18673022 ttttaaaatgagtgtcgctctagccaattacacacaaattaagaaatgaaataaagtagtcaaatgtcataacaattttactaaaataaccttacttatc 18673121  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgta 341  Q
    | ||| || ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||       ||||||| | |    
T  18673122 a-gaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaaattaaagtcgca 18673220  T
Q  342 ttgaaaatgtaaagtgacgtttattttaaaa 372  Q
    |||||||||||||| ||| || |||||||||    
T  18673221 ttgaaaatgtaaagcgacattcattttaaaa 18673251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 8471489 - 8471333
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||||||| ||||||| ||| | |||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  8471489 gtttcaaaatgagtgtcgctttagccaattgcacatagattaagaaatgaaataaagtagtcaaatgtcataccaattttactaaaataaccttacttta 8471390  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
     | ||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  8471389 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgga 8471333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 141 - 368
Target Start/End: Original strand, 34168134 - 34168353
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||||||||| ||||| ||||||  ||  ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  34168134 gtttcaaaatgagtgtcgctttagccaattacacacggattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataaccttacttta 34168233  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | |||||||||||||||||||||| |||||||| ||||||||  ||||      |||||||| |||| |||||||||| |||       ||||||||||    
T  34168234 taagaacaagacaaacttaaagttgcattgaaaattgtgtgag--agaa------gagtatttcttgagggtaaagttggaagaaaaaagttaaagttgt 34168325  T
Q  341 attgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||||||||||||| || |||||    
T  34168326 attgaaaatgtaaagtgacattcatttt 34168353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 141 - 319
Target Start/End: Complemental strand, 27416733 - 27416553
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    ||||| |||||||| |||||| || ||||||||| ||||||||  ||   |||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  27416733 gtttttaaatgagtgtcgcttcagtcaattgcacgcagattaaggaatataataaagtagtcaaatgtcatagcaattttactaaaataaccttacttta 27416634  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaa--gtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
     | ||| |||||||||||| | ||| ||||||||  |||||||||| | ||||||||||||||||||||| ||||||||||    
T  27416633 taagaaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggagtatttattgagggtaaagttg 27416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 9022626 - 9022393
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| ||||| || || |||     |||| || |||||||||| |   |||  ||||    
T  9022626 gttttaaaatgagtgtcgttttagccaattgcacacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcacttgtttta 9022527  T
Q  241 catgaacaagacaaacttaaa-gttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttg 339  Q
     ||||| |||||||||||||| |||| |||||||| ||||||||| |  |||||||||||||||||||| |||||||||| |||       |||||||||    
T  9022526 tatgaaaaagacaaacttaaaagttgcattgaaaattgtgtgagaaa--aaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttg 9022429  T
Q  340 tattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||| ||| |||||||||| || ||||||||||||    
T  9022428 tattggaaacgtaaagtgacattcattttaaaacaa 9022393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 162 - 306
Target Start/End: Complemental strand, 13109198 - 13109054
Alignment:
Q  162 tagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaa 261  Q
    |||||||||||||||| |||||  || | ||||||||| |||||| |||||| ||||||||||||||||||||| |||| | ||| |||||||| |||||    
T  13109198 tagccaattgcacacaaattaaggaatgaaataaaatattcaaatgtcatagtaattttactaaaataaccttattttataagaaaaagacaaatttaaa 13109099  T
Q  262 gttgtattgaaaagtgtgtgagacagaaaagttggagtatttatt 306  Q
     ||| ||| |||| ||||||||| |||||||||||||||||||||    
T  13109098 tttgcattaaaaattgtgtgagagagaaaagttggagtatttatt 13109054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 218 - 375
Target Start/End: Complemental strand, 7612651 - 7612496
Alignment:
Q  218 tttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagt 317  Q
    ||||||||| |  |||||||||| | ||| |||||||| ||||||||| |||||||| |||||||||  |||||||||||||||||||| | ||||||||    
T  7612651 tttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttatttagggtaaagt 7612554  T
Q  318 tgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    || |||       |||| |||||||||||||||||||||||| || ||||||||||||    
T  7612553 tggaagagaaaacttaatgttgtattgaaaatgtaaagtgacattcattttaaaacaa 7612496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 141 - 368
Target Start/End: Original strand, 32326647 - 32326873
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||||||||| ||||||||||||||||||  || | ||| ||||| |||     | || || |||||||||| |  ||||  ||||    
T  32326647 gttttaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgcccttgtttta 32326746  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaa-gnnnnnnnttaaagttg 339  Q
     ||||| |||||||| ||||||||| |||||||| ||||||||| |  |||||||||||||||||||  |||||| |||||| |       |||||||||    
T  32326747 tatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaa--aaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaagttg 32326844  T
Q  340 tattgaaaatgtaaagtgacgtttatttt 368  Q
    |||||||||||||||||||| ||||||||    
T  32326845 tattgaaaatgtaaagtgacatttatttt 32326873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 248 - 372
Target Start/End: Original strand, 8382507 - 8382629
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||| ||||| |||||||| |||||||||  ||||||||||||||| |||||| ||||||||||| ||       |||||||||||||||||    
T  8382507 aagacaaacttatagttgcattgaaaattgtgtgaga--gaaaagttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgtattgaaa 8382604  T
Q  348 atgtaaagtgacgtttattttaaaa 372  Q
    |||||||||||| || |||||||||    
T  8382605 atgtaaagtgacattcattttaaaa 8382629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 231 - 374
Target Start/End: Complemental strand, 30789075 - 30788934
Alignment:
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||||||||| | ||| |||||||| |||||||||||||||||| | ||||||  ||||||||||||||||||| | | |||||||||  |||           
T  30789075 ccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgag--agaaaagttggagtatttactaagggtaaagttagaagaaaaaaa 30788978  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaaca 374  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  30788977 ttaaagttgtattgaatatgtaaagtgacatttattttaaaaca 30788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 191 - 375
Target Start/End: Complemental strand, 35052652 - 35052469
Alignment:
Q  191 aataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaa 290  Q
    |||||| ||||| |||||||||| ||||||| |||||||| |||| |||  | ||| |||| ||  ||||||||| |||||||| | ||||||| |||||    
T  35052652 aataaagtagtcgaatatcatagtaattttattaaaataatcttatttttaa-gaaaaagataagtttaaagttgcattgaaaattatgtgagagagaaa 35052554  T
Q  291 agttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    | || |||||||||||||||| |||||||||||       |||||||||||||| |||||||||  ||| || ||||||||||||    
T  35052553 attttgagtatttattgaagggaaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaacgacattcattttaaaacaa 35052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 248 - 373
Target Start/End: Original strand, 3095533 - 3095656
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||||| |||||||||||| ||||||||||  ||       |||||||||||||||||    
T  3095533 aagacaaacttaaagttgcattgaaaagtgtgcgag--agaaaagttgaagtatttattgagggtaaagttgggaggaaaaaattaaagttgtattgaaa 3095630  T
Q  348 atgtaaagtgacgtttattttaaaac 373  Q
    ||||||||| || || ||||||||||    
T  3095631 atgtaaagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 36915595 - 36915365
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||| |||| ||||||||| |||||||||  || ||||| ||||| |||     ||||  | |||||||||| |  ||||  ||||    
T  36915595 gttttaaaatgagtgtcgttttaaccaattgcatacagattaaggaatggaatgaaataatcattagacataatatttttactaaattgcccttgtttta 36915496  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     ||||| |||||||||||||||||| |||||||| |||| || |   ||| |||| | ||||||||||||||||||||| |||       ||||||||||    
T  36915495 tatgaaaaagacaaacttaaagttgcattgaaaattgtgagaaa---aaatgttgaa-tatttattgaaggtaaagttggaagaaaaaaattaaagttgt 36915400  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| || ||||| ||||||    
T  36915399 attgaaaatgtaaagtgacattcattttgaaacaa 36915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 32661428 - 32661326
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||| ||||||||||  ||       |||||||||||||||||    
T  32661428 aagacaaacttaaagttgtattgaaaattgtgtgag--agaaaagttagagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaa 32661331  T
Q  348 atgta 352  Q
    |||||    
T  32661330 atgta 32661326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 4760471 - 4760562
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||| |||||||  || | |||||| ||||||||| |||||||||||||||    
T  4760471 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 4760562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 233 - 375
Target Start/End: Original strand, 27109835 - 27109975
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnntt 332  Q
    |||||||| | ||| | |||||||||||||||| |||| ||| |||||||||  |||||||| ||||||||||||| |||||||||| |||       ||    
T  27109835 ttactttataagaaaaggacaaacttaaagttgcattggaaattgtgtgaga--gaaaagttagagtatttattgagggtaaagttggaagaaaaaaatt 27109932  T
Q  333 aaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||| ||||| |||||||| || ||||| ||||||    
T  27109933 aaagttgtattggaaatggaaagtgacattcattttgaaacaa 27109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 9880423 - 9880504
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| |||||||| ||||||||||||||||||| ||| |||||||| | ||||||| |||||||||||||||    
T  9880423 gtttcaaaatgagtgtcgctttaaccaattgcacacagattaagaaatggaataaagtggtcaaatgtcatagcaattttac 9880504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 249 - 375
Target Start/End: Complemental strand, 11257662 - 11257540
Alignment:
Q  249 agacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaa 348  Q
    ||||||||||||||||| |||||||| ||||||||  |||||||||| ||||||||||||   |||||||| |||       ||||||||||||| ||||    
T  11257662 agacaaacttaaagttgcattgaaaattgtgtgag--agaaaagttgaagtatttattgagattaaagttggaag--aaaaattaaagttgtattaaaaa 11257567  T
Q  349 tgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||| || ||||||||||||    
T  11257566 tgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 233 - 375
Target Start/End: Complemental strand, 22601273 - 22601134
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnntt 332  Q
    |||||||| | ||| |||||||||||||||||| |||||||| | ||||||  ||||| |||||||||||||| || |||||||||| |||       ||    
T  22601273 ttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtgag--agaaaggttggagtatttatcgagggtaaagttggaag-aaacaatt 22601177  T
Q  333 aaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||| |||||||||||||| || ||||| ||||||    
T  22601176 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 22601134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 4989704 - 4989630
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttt 220  Q
    ||||||||| |||||||| ||||||||| ||| |||||| || |||||||| |||||||||||||||||||||||    
T  4989704 aaaatgagtttcgctttaaccaattgcatacatattaaagaatggaataaagtagtcaaatatcatagcaatttt 4989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 39463488 - 39463407
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| || ||||||||||||    
T  39463488 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcgtagcaattttac 39463407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 11168914 - 11168818
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttact 237  Q
    |||| ||||||||| |||||||||||| || ||||||||||||  || | ||| |  |||||||||||||||||||||||||| ||||| |||||||    
T  11168914 gtttcaaaatgagtgtcgctttagccattttcacacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaatagccttact 11168818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 9304556 - 9304637
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||  |||||||||||||||||| | ||| |||  |||||||||||| |||| |||||||||||||||    
T  9304556 gttttaaaatgagtgtcattttagccaattgcacacataataagaaattgaataaaatagttaaatgtcatagcaattttac 9304637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 5588539 - 5588628
Alignment:
Q  286 agaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||||||||||||||||||||||| |||       |||||||||||||| ||||||||| |||| || | ||||||||||    
T  5588539 agaaaagtttgagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 42946233 - 42946120
Alignment:
Q  260 aagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgac 359  Q
    |||||| ||| |||| |||||||||  ||||| || ||||||||||||| |||||| |||||||       ||||||||||||| |||||||||| ||||    
T  42946233 aagttgcattaaaaattgtgtgaga--gaaaaattagagtatttattgagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgac 42946136  T
Q  360 gtttattttaaaacaa 375  Q
     || ||||||||||||    
T  42946135 attcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 283
Target Start/End: Original strand, 38328977 - 38329118
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||  || ||||| ||||| |||     |||| || |||||||||| |  ||||||||||    
T  38328977 gtttcaaaatgagtttcgctttagtcaattgcacacagattaaggaatggaatgaaataatcattagacataacacttttactaaact-gccttacttta 38329075  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgag 283  Q
     |   | |||||||||||||||||| |||||||| ||||||||    
T  38329076 taatcaaaagacaaacttaaagttgcattgaaaattgtgtgag 38329118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 5790566 - 5790649
Alignment:
Q  141 gttttaaaatgagtat--cgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| |||||||||||  ||||||||   |||||| ||||||||| |||  |||||||||||||||||||| ||||||||||||    
T  5790566 gtttcaaaatgagtatgtcgctttagttgattgcatacagattaagaaatagaataaaatagtcaaatatcgtagcaattttac 5790649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 17921171 - 17921107
Alignment:
Q  158 gctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||||||||| |||||  ||  ||||||||||||||||| |||||||||||||||    
T  17921171 gcttaagccaattgcacacatattaaggaattgaataaaatagtcaaatgtcatagcaattttac 17921107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 39698585 - 39698669
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||||||||| || |||||| |||||||||||| |||||   | | |||||| ||||||||| | |||||||||||||    
T  39698585 tctgttttaaaatgagtgtctctttaggcaattgcacacatattaaggtatgaaataaagtagtcaaatgttatagcaattttac 39698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 43938244 - 43938179
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaa 315  Q
    |||| ||||||||||||| ||| ||||||||| ||||  ||||||||||||||||||||||| |||||    
T  43938244 aagataaacttaaagttgcattaaaaagtgtgcgaga--gaaaagttggagtatttattgaatgtaaa 43938179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 43084536 - 43084630
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| ||  ||||||||| ||| || |||||| |||||||||||| |||||  || | |||||| ||||||||| |||||| ||||||||    
T  43084536 tattactctctccattttaaaataagtgtcactttagtcaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagtaattttac 43084630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 6839437 - 6839283
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||| |||| || |||| ||||||||||||||| ||||| ||||| |||     |||| || |||||||||| |  | ||||||||    
T  6839437 gtttaaaaatgagtgtcgttttaacccattgtacacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgcctttacttta 6839338  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
     | ||| ||||||||| |||| ||| |||||||| | ||||||  ||||||||||||    
T  6839337 taagaaaaagacaaacataaaattgcattgaaaattatgtgag--agaaaagttgga 6839283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 1774170 - 1774214
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||||| |||| || ||||||||||||    
T  1774170 ttaaagttgtattgaaaatgtaaattgacattcattttaaaacaa 1774214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 2803348 - 2803392
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||    
T  2803348 ttaaaattgtattgaaaatgtaaagtgacatttattttgaaacaa 2803392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 4530107 - 4530055
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||| ||| |||| ||||||||| ||| ||||||||||||||||||||||||    
T  4530107 tactccatccgtttcaaaatgagtgtcgttttagccaattgcacacagattaa 4530055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 29931342 - 29931386
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||  |||||||||||||||    
T  29931342 ttaaagttgtattggaaatgtaaagtgatatttattttaaaacaa 29931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 38329140 - 38329184
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||    
T  38329140 ttaaagttgtattgaaaatataaagtgacattcattttaaaacaa 38329184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 45187395 - 45187439
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||    
T  45187395 ttaaagttgtattgaaaatataaagtgacatttattttgaaacaa 45187439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 375
Target Start/End: Complemental strand, 3203368 - 3203325
Alignment:
Q  332 taaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||    
T  3203368 taaagttgcattgaaaatgtaaagtgacatttattttgaaacaa 3203325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 31899160 - 31899251
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| |||| ||| ||||||||| |||||||||||||||||||| | |||||  || | |||||| | ||| ||| ||||| |||||||||    
T  31899160 tactccatctatttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagttgtcgaatgtcataacaattttac 31899251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 8106811 - 8106853
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaa 184  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||    
T  8106811 ttttaaaatgagtatcgatttagtcaattgcacacaaattaaa 8106853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 45187226 - 45187260
Alignment:
Q  149 atgagtatcgctttagccaattgcacacagattaa 183  Q
    |||||| ||||||||||||||||||||||||||||    
T  45187226 atgagtgtcgctttagccaattgcacacagattaa 45187260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 8382398 - 8382467
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaata 199  Q
    |||||| ||| |||||||||||||| ||| |||||| ||||||||| | |||||| || | |||||||||    
T  8382398 ttactccatccgttttaaaatgagtgtcgttttagctaattgcacataaattaaagaatgaaataaaata 8382467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 16208992 - 16208955
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||||||||||||||||||||||| || |||||    
T  16208992 ttaaagttgtattgaaaatgtaaagtgacattcatttt 16208955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 31693545 - 31693626
Alignment:
Q  145 taaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 226  Q
    |||||||| | ||||||||||||| ||||||||  ||||  ||   |||||| ||||||||| ||||| |||||||||||||    
T  31693545 taaaatgaatgtcgctttagccaactgcacacatgttaaggaatataataaagtagtcaaatgtcataacaattttactaaa 31693626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 32061534 - 32061611
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaannnnnnnnatctaaagtgacactcaatttaaaa 408  Q
    ||||| |||||| |||||||||||||||| || ||||||||||||        || |||||||||||||| |||||||    
T  32061534 ttaaatttgtatagaaaatgtaaagtgacattcattttaaaacaattttttttatttaaagtgacactcattttaaaa 32061611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 8107270 - 8107298
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgac 359  Q
    |||||||||||||||||||||||||||||    
T  8107270 ttaaagttgtattgaaaatgtaaagtgac 8107298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 2e-63; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 128 - 372
Target Start/End: Original strand, 4566030 - 4566274
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    ||||||||| || |||||||||||||| ||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  4566030 tattactctctccgttttaaaatgagtgtcgctttagtcaattacacacagattaaaaaatgtaataaaatagtcaaatatcataacaattttactaaaa 4566129  T
Q  228 taaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnn 327  Q
    |||||||| |||| | ||| |||| ||| ||||||||| |||||||| ||||||||| |||||||||||| | |||||||| | |||||||||||         
T  4566130 taaccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgagagagaaaagttggactctttattgatgataaagttgaaaaaaaa 4566229  T
Q  328 nnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
       ||||||||||||| ||||||||||||||| | ||||||||||    
T  4566230 aaattaaagttgtattaaaaatgtaaagtgacatatattttaaaa 4566274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 128 - 375
Target Start/End: Original strand, 10580765 - 10581012
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    |||||||| ||  |||| ||||||||||||| || |||||||||||||| ||| ||  || ||||||||||||||||||||||| ||||||||| |||||    
T  10580765 tattactcaattcgtttcaaaatgagtatcgtttaagccaattgcacacggatcaaggaatggaataaaatagtcaaatatcatcgcaattttattaaaa 10580864  T
Q  228 taaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnn 327  Q
    ||| ||||||||| | ||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||| |||        
T  10580865 taatcttactttataagaacaagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaa 10580964  T
Q  328 nnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
       ||||||||||||||||||| ||||||||  || ||||| ||||||    
T  10580965 aaattaaagttgtattgaaaatataaagtgatattcattttgaaacaa 10581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 43388579 - 43388811
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  43388579 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 43388678  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| || |||||||||||||||||||||||| | ||||||  ||||||||| ||||||||||||| |||||||||| |||       |||||||||     
T  43388679 taagaaaaatacaaacttaaagttgtattgaaaattatgtgag--agaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 43388776  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||| ||| || ||||| ||||||    
T  43388777 attgaaaatgtaaagcgacattcattttgaaacaa 43388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 25332802 - 25332569
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| |||||||||| |||||||||||||||||  ||  ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  25332802 gttttaaaatgagtgtcgctttagctaattgcacacagattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataaccttacttta 25332703  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| |||||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||||||| | |||||||| |||       |||||||||     
T  25332702 taagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtatttattgaggataaagttggaag-aaaaaattaaagttgc 25332604  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||| | |||||| ||||| ||||||    
T  25332603 attggaaatgtaaggcgacgttcattttgaaacaa 25332569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 145 - 372
Target Start/End: Original strand, 39866596 - 39866824
Alignment:
Q  145 taaaatgagtatcgctttagccaatt-gcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacat 243  Q
    |||||||||| ||| |||| |||||| |||||||||||||  || |||||||| ||||||||| |||||||||||||||||||||||||||||||||||     
T  39866596 taaaatgagtgtcgttttaaccaatttgcacacagattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttacaa 39866695  T
Q  244 gaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtatt 343  Q
    ||| | ||||||||||||||||||||||||| ||||||||| | |||| || |||||||||||||||||||||||| |||       ||||| ||| |||    
T  39866696 gaaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagtatttattgaaggtaaagttggaagaaaaaaattaaatttgcatt 39866795  T
Q  344 gaaaatgtaaagtgacgtttattttaaaa 372  Q
    | |||||||||| ||| || |||||||||    
T  39866796 ggaaatgtaaagcgacattcattttaaaa 39866824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 33093599 - 33093366
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    ||||| ||||||||||||||||||||||||| |||| |||||| ||| | |||||| |||| |||| ||||| ||||||||||||| |||||||||||||    
T  33093599 gttttcaaatgagtatcgctttagccaattgtacacggattaagaaatgaaataaagtagttaaatgtcataacaattttactaaa-taaccttacttta 33093501  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     |  | ||||| ||||||||||||| |||||||| ||||||||  |||||||||||| |||||||||| |||||||||| |||       ||||||||||    
T  33093500 taacatcaagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatttattgagggtaaagttggaagaaaaaaattaaagttgt 33093401  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| || ||||| ||||||    
T  33093400 attgaaaatgtaaagtgacattcattttgaaacaa 33093366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 14698220 - 14698064
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||  ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  14698220 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcatagcaattttactaaaataaccttacttta 14698121  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
     | ||| || |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  14698120 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttgga 14698064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 190 - 375
Target Start/End: Complemental strand, 2459956 - 2459771
Alignment:
Q  190 gaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaa 289  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| |||| | ||| | |||||||||||||||| |||||||| ||||||||| ||||    
T  2459956 gaataaagtagtcaaatatcatagcaattttactaaaacaaccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaa 2459857  T
Q  290 aagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| |||||||||| |||       ||||||||| |||| |||||||||| ||| || ||||||||||||    
T  2459856 aagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttaaaacaa 2459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 195 - 375
Target Start/End: Complemental strand, 41984597 - 41984416
Alignment:
Q  195 aaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaa-cttaaagttgtattgaaaagtgtgtgagacagaaaagt 293  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||| |||||||| |||||| || ||||||||    
T  41984597 aaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagt 41984498  T
Q  294 tggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||| |||||||||||| |||       ||||||||||||||||||||||||| ||  |||||||| ||||||    
T  41984497 tggagtatttattaaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgatatttattttgaaacaa 41984416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 142 - 375
Target Start/End: Original strand, 775807 - 776039
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||| | |||||||||||||||||| |||||||||  ||  ||||||| ||||||||| ||||| |||||||||||||||||||||| ||||     
T  775807 ttttaaaatgaatgtcgctttagccaattgcatacagattaaggaatagaataaagtagtcaaatgtcataacaattttactaaaataaccttaatttat 775906  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgta 341  Q
    | ||| |||||||||||||||||| |||||||| |||||| ||  |||||||| ||||||||||||| |||||||||  |||       ||||||||| |    
T  775907 aagaaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagtatttattgagggtaaagttagaag-aaaaaattaaagttgca 776005  T
Q  342 ttgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| ||| || ||||| ||||||    
T  776006 ttgaaaatgtaaagcgacattcattttgaaacaa 776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 141 - 373
Target Start/End: Complemental strand, 7743631 - 7743401
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaa-atatcatagcaattttactaaaataaccttacttt 239  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||| ||   ||| ||||| |||  | || ||| || |||||||||  |  |||||||||    
T  7743631 gtttcaaaatgagtgtcgctttagccaatttcacacagattaaagaattaaatgaaataatcatcagat-ataacacttttactaagttgcccttacttt 7743533  T
Q  240 acatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttg 339  Q
    | | ||| |||||||| ||||||||| |||||||| |||||||||  ||||||||||| |||||||||| |||||||||| |||       |||||||||    
T  7743532 ataagaaaaagacaaatttaaagttgcattgaaaattgtgtgaga--gaaaagttggactatttattgagggtaaagttggaagaaaaagattaaagttg 7743435  T
Q  340 tattgaaaatgtaaagtgacgtttattttaaaac 373  Q
    ||||| |||||||||||||| || ||||||||||    
T  7743434 tattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 142 - 358
Target Start/End: Original strand, 36360298 - 36360510
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| ||||||||| ||||||||| || |||||| || | ||| ||||| |||     |||| || |||||||||| |  ||||| ||||     
T  36360298 ttttaaaatgagtgtcgctttagtcaattgcacgcaaattaaagaatgaaatgaaataatcattagacataacacttttactaaactgcccttattttat 36360397  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgta 341  Q
    | ||| |||| |||||||||||||||||||||| ||||||    ||||||||| |||||| |||||| ||||||||||||||       |||||||||||    
T  36360398 aagaaaaagataaacttaaagttgtattgaaaattgtgtg----agaaaagtttgagtatatattgagggtaaagttgaaagaaaaaaattaaagttgta 36360493  T
Q  342 ttgaaaatgtaaagtga 358  Q
    ||||||||| |||||||    
T  36360494 ttgaaaatgcaaagtga 36360510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 38809924 - 38809833
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttact 237  Q
    ||||||||||||| ||||||||||||||||||||||||  || |||||||| | ||||||| |||||||||||||||||||||| |||||||    
T  38809924 aaaatgagtatcgttttagccaattgcacacagattaaggaaaggaataaagtggtcaaatgtcatagcaattttactaaaatagccttact 38809833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 4840725 - 4840874
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| ||||||||| |||||||| |||||| ||  |||||||| ||||||||||||| |||||||    
T  4840725 ttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaactgtgtggga--gaaaagtttgagtatttattgagggtaaag 4840822  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||| |||       |||||||||||||| |||||||||||||| || |||||    
T  4840823 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 4840874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 25383397 - 25383488
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||| || |||||  || |||||||| |||||||||||||||||||||||||    
T  25383397 tactccatccgttttaaaatgagtgtcgctttagccaattgcacgcaaattaaggaatggaataaagtagtcaaatatcatagcaattttac 25383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 24775343 - 24775187
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    ||||||||||||   ||||||||| | ||| || |||||||||||||| ||||||||| ||||||||  |||||||||| |||||||||||| ||||||     
T  24775343 ttttactaaaatgctcttactttataagaaaaaaacaaacttaaagttatattgaaaattgtgtgag--agaaaagttgaagtatttattgagggtaaac 24775246  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||  ||       ||||| |||||||||||||||||||||||  | ||||||||||||    
T  24775245 ttgggagaaaaaaattaaaattgtattgaaaatgtaaagtgacaatcattttaaaacaa 24775187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 4133253 - 4133172
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  4133253 gtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 4133172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 34225980 - 34225826
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||||||| |||||||  || | ||| ||||| |||     ||||  |||||||||||| |  ||||||||||    
T  34225980 gtttcaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaatgaaataatcattagacataataattttactaaattgcccttacttta 34225881  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
     | ||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||    
T  34225880 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagttgga 34225826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 16807439 - 16807519
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| ||||| ||||||||    
T  16807439 gttttaaaatgagtgtcgctttagccaattgcacacatattaatgaatggaataaagtagtcaaatgtcataacaatttta 16807519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 16846720 - 16846800
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    |||||||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| ||||| ||||||||    
T  16846720 gttttaaaatgagtgtcgctttagccaattgcacacatattaatgaatggaataaagtagtcaaatgtcataacaatttta 16846800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 29809054 - 29808963
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||| |||||  || | |||||| ||||||||| || ||||||||||||    
T  29809054 tactccatctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcgtagcaattttac 29808963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 441153 - 441234
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| ||| |||||||||||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  441153 gtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatggaataaagtagtcaaatgtcatagcaattttac 441234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 248 - 349
Target Start/End: Complemental strand, 37106985 - 37106886
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||| ||||||||||||| |||||||| |||||||||  |||||||||||||||||||| | |||||||||| |||       |||||||||||||||||    
T  37106985 aagaaaaacttaaagttgcattgaaaattgtgtgaga--gaaaagttggagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattgaaa 37106888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 217 - 354
Target Start/End: Complemental strand, 43460927 - 43460792
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | | | |||||||| |||||||||||||||||| | ||||||  |||||||||| |||||||||||| ||||| |    
T  43460927 ttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatgtgag--agaaaagttgaagtatttattgagggtaacg 43460830  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaa 354  Q
    ||| |||       |||||||||||||| |||||||||    
T  43460829 ttggaagagaaaacttaaagttgtattggaaatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 29396599 - 29396683
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||  || | |||||| ||||||||| || ||||||||||||    
T  29396599 tctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaagtagtcaaatgtcgtagcaattttac 29396683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 216 - 359
Target Start/End: Complemental strand, 16316864 - 16316723
Alignment:
Q  216 attttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaa 315  Q
    ||||||||||| |  ||||||| || | ||| |||||||| ||||||||| |||||||| ||||||||  | |||||||||| ||||||||||| |||||    
T  16316864 attttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgtgag--ataaaagttggaatatttattgaaagtaaa 16316767  T
Q  316 gttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgac 359  Q
     ||| |||       |||||||||||||| |||| |||||||||    
T  16316766 tttggaagaaaaaaattaaagttgtattggaaatataaagtgac 16316723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 274
Target Start/End: Original strand, 14378158 - 14378303
Alignment:
Q  129 attactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaat 228  Q
    |||||||| || |||||||||||||| |||||||||| |||||||||||| ||||  ||  |||| ||||| |||  ||  ||| || |||||||||| |    
T  14378158 attactctctccgttttaaaatgagtgtcgctttagctaattgcacacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaact 14378257  T
Q  229 aaccttactttacatgaacaagacaaacttaaagttgtattgaaaa 274  Q
      |||||||||| | ||| |||| ||| ||||||||| ||||||||    
T  14378258 gcccttactttataagaaaaagataaatttaaagttgcattgaaaa 14378303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 42743256 - 42743178
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||||| ||||||||||||||||  ||||||||||  || | |||||| ||||||||| |||||||||||||||    
T  42743256 ttttaaaatgagtgtcgctttagccaattg--cacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 42743178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 375
Target Start/End: Original strand, 43344213 - 43344375
Alignment:
Q  209 catagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattga 308  Q
    |||| |||||||| ||||  | |||||||||| | ||| |||| ||  |||||||||||||||||| | ||||||  |||||| || ||||||||||| |    
T  43344213 cataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgtgag--agaaaaattagagtatttattaa 43344310  T
Q  309 aggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||| |||       ||||||||||||||||||| ||| ||||| || ||||| ||||||    
T  43344311 aggtaaagttggaag--aaaaattaaagttgtattgaaaatataaggtgacattcattttgaaacaa 43344375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 8774294 - 8774202
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| ||| |||||||||||||| | | ||||| |||||||||||| |||||  || | |||||||||||||||| ||||| |||||||||    
T  8774294 ttactccatccgttttaaaatgagtgttgttttagtcaattgcacacatattaaggaatgtaataaaatagtcaaatgtcataacaattttac 8774202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 1298778 - 1298927
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| ||||||||| |||||||| | |||||||  |||||||||||| ||||||||| | |||||    
T  1298778 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--gaaaagttggagaatttattgaggataaag 1298875  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||  | |       |||||||||||||  |||||||||||||| || |||||    
T  1298876 ttcgatgagaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 1298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 1360300 - 1360175
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||| |||||||| ||| | ||  |||||||||| |||||||||||| |||||| |||  ||       |||||||||||||| ||    
T  1360300 aagacaaacttaaagttgcattgaaaattgtttaag--agaaaagttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgtattggaa 1360203  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||||||| || ||||| ||||||    
T  1360202 atgcaaagtgacattcattttgaaacaa 1360175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 42753988 - 42753897
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| || |||| ||||||| | ||||||||||||||| |||||| |||||| || | |||||| ||| ||||| |||||||||||||||    
T  42753988 tactctgtccgtttcaaaatgactgtcgctttagccaattacacacatattaaagaatgaaataaagtagacaaatgtcatagcaattttac 42753897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 4536694 - 4536572
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||| ||||||||| |||||||| |||||||||     ||||| |||||||| |||| ||||||||||  ||       |||||||||||||| ||    
T  4536694 aagacaaatttaaagttgcattgaaaattgtgtgaga-----aagttagagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattggaa 4536600  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||| || ||||| ||||||    
T  4536599 atgtaaagtgacattcattttgaaacaa 4536572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 8789341 - 8789433
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| ||| |||| ||||||||| | | ||||| |||||||||||| |||||  || | |||||||||||||||| ||||| |||||||||    
T  8789341 ttactccatccgtttaaaaatgagtgttgttttagacaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttac 8789433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 12393842 - 12393922
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| |||  ||||||| || |||||||||| ||||||||| | |||||| |||| |||| |||||||||||||||    
T  12393842 ttttaaaatcagtgccgctttaaccgattgcacacatattaaaaaatgaaataaagtagttaaatgtcatagcaattttac 12393922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 38926832 - 38926756
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| ||||||||| |||||||||||| |||||  || | |||||| ||||||||| ||||| |||||||||    
T  38926832 aaaatgagtgtcgctttagtcaattgcacacatattaatgaatgaaataaagtagtcaaatgtcataacaattttac 38926756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 12342324 - 12342243
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| ||| ||||||||||||||||   |||||  || | |||||| ||||||||| ||||| |||||||||    
T  12342324 gttttaaaatgagtgtcgttttagccaattgcacatttattaaggaatgaaataaagtagtcaaatgtcataacaattttac 12342243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 14378334 - 14378375
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  14378334 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaa 14378375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 30855336 - 30855255
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| |||||||| |||||||||| || |||||  ||  ||||||||||||||||| || || |||||||||    
T  30855336 gtttcaaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaaatagtcaaatgtcttaacaattttac 30855255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 32227933 - 32228014
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||| || ||||||||||||||||||||||| |||||  || | |||||| || |||||| ||||| |||||||||    
T  32227933 gtttcaaaataagcatcgctttagccaattgcacacaaattaaggaatgaaataaagtattcaaatgtcataacaattttac 32228014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 45372645 - 45372686
Alignment:
Q  334 aagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  45372645 aagttgtattgaaaatgtaaagtgacattcattttaaaacaa 45372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 34225815 - 34225771
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||    
T  34225815 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 34225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 44228710 - 44228638
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaa-ttgcacacagattaaaaaacggaataaaata 199  Q
    ||||||||  || |||||||||||| | ||||||||||||| |||||||| |||||||||| ||||| |||||    
T  44228710 tattactccctccgttttaaaatgaatgtcgctttagccaatttgcacacggattaaaaaatggaatgaaata 44228638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 45148062 - 45148106
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||| |||||||||||||||||||| || ||||||||||||    
T  45148062 ttaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 375
Target Start/End: Original strand, 18374793 - 18374918
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||  ||||| |||||||||||| ||||  |||   ||||||| ||||||||||||| |||||||||| |||       ||||| || ||||| ||    
T  18374793 aagacaagtttaaaattgtattgaaaattgtg--agaagaaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaattatattggaa 18374890  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||| || ||||| ||||||    
T  18374891 atgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 36106325 - 36106390
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaat 206  Q
    |||||||||||||| |||||||||| ||||||| ||| |||||  || | |||||| |||||||||    
T  36106325 gttttaaaatgagtgtcgctttagcaaattgcatacatattaaggaatgaaataaagtagtcaaat 36106390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 42969941 - 42969900
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||    
T  42969941 ttaaagtggtattaaaaatgtaaagtgacatttattttaaaa 42969900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 13562223 - 13562140
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 226  Q
    ||||||||||||| ||| ||| | |||||||||||| |||||  || |||| ||| ||||||||| |||||  ||||||||||||    
T  13562223 ttttaaaatgagtgtcgtttttgtcaattgcacacatattaaggaatggaagaaagtagtcaaatgtcata-taattttactaaa 13562140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 29795300 - 29795344
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| || ||||| ||||||    
T  29795300 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29795344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 70375 - 70609
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||||| || ||||||||| ||||||||| |||  ||||||| ||||||||| ||||  |||||||||||||||||||||||||||    
T  70375 gttttaaaatgagtgtcgctataaccaattgcatacagattaagaaattgaataaagtagtcaaatgtcatgacaattttactaaaataaccttacttta 70474  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||       |||||||||     
T  70475 taagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgc 70574  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||| || ||||| ||||||    
T  70575 attgaaaatgtaaagtgacattcattttgaaacaa 70609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 2e-60; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 141 - 319
Target Start/End: Original strand, 28200144 - 28200322
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  28200144 gttttaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagttgtcaaatgtcatagcaattttactaaaataaccttacttta 28200243  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
     | ||| || |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| ||||||||||    
T  28200244 taagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtatttattgagggtaaagttg 28200322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 141 - 368
Target Start/End: Original strand, 44582700 - 44582927
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| |||||||||  |||||||||||||||||  || | |||||| ||||||||| ||||| ||||||||||||||||| |||||||||    
T  44582700 gttttaaaatgagtgtcgctttagtgaattgcacacagattaatgaatgaaataaagtagtcaaatgtcataacaattttactaaaataatcttacttta 44582799  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| |||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||| |||||||||| |||       ||||||||||    
T  44582800 taagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgt 44582899  T
Q  341 attgaaaatgtaaagtgacgtttatttt 368  Q
    |||| |||||||||||||| ||||||||    
T  44582900 attggaaatgtaaagtgacatttatttt 44582927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 22665167 - 22664937
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||||||||| ||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  22665167 gttttaaaatgagtgtcgctttagtcaattgcacacagattaacgaatggaataaagtagtcaaatatcatagcaattttactaaactaaccttacttta 22665068  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | |||||||||||||||||||||| ||| |||| |||    || ||| ||||||||||||||||||| |||||||||| |||       |||| |||||    
T  22665067 taagaacaagacaaacttaaagttgaattaaaaattgt----gagagagaagttggagtatttattgagggtaaagttggaagaaattaattaacgttgt 22664972  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||||||||| || ||||| ||||||    
T  22664971 attggaaatgtaaagtgacattcattttgaaacaa 22664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 141 - 319
Target Start/End: Original strand, 254833 - 255011
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||| ||| | | |||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  254833 gtttcaaaatgagtgtcgctttagtcaattacacacagattaagaaatgaactaaagtagtcaaatgtcatagcaattttactaaaataaccctacttta 254932  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
     | ||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||| ||||||||||    
T  254933 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttg 255011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 26252350 - 26252116
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| | |||||| |||||||||||||||||||  || || || || ||||||||| |||| ||||||||||||||||||||||| ||||    
T  26252350 gtttcaaaatgagtgttgctttaaccaattgcacacagattaaggaatgggattaagtagtcaaatgtcattgcaattttactaaaataaccttatttta 26252251  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | |||||||||||||||||||||| |||||||| ||||||||| | ||||||| ||||||||||| | |||||||||| |||       || |||||||    
T  26252250 taagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaagaaaaaaatttaagttgt 26252151  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||||||||| || ||||| ||||||    
T  26252150 attggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 146 - 373
Target Start/End: Original strand, 42650176 - 42650402
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||| | ||||||||||||||||||||||||||||| |  | |||||| || |||||| |||||||||||||||||||||||||||| |||| | ||    
T  42650176 aaaatgaatgtcgctttagccaattgcacacagattaaagactgaaataaagtaatcaaatgtcatagcaattttactaaaataaccttagtttataaga 42650275  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattga 345  Q
    | |||||||||||||| ||| |||||||| ||||||||| | |||||||| ||||||| |||||||||||| || |||       |||||||||||||      
T  42650276 aaaagacaaacttaaaattgcattgaaaattgtgtgagaga-aaaagttgaagtatttcttgaaggtaaagctggaagaaaaaaattaaagttgtattag 42650374  T
Q  346 aaatgtaaagtgacgtttattttaaaac 373  Q
    |||||||||| ||| |||||||||||||    
T  42650375 aaatgtaaagcgacatttattttaaaac 42650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 2459236 - 2459006
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||   ||| || ||||||||| ||||| |||||||||||||||||||||||||||    
T  2459236 gtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaataaccttacttta 2459137  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| || |||||||||||||||||||||||| |||    || ||||||||| |||||||| |||| |||||||||| |||       |||||||||     
T  2459136 taagaaaaatacaaacttaaagttgtattgaaaattgt----gagagaaaagtttgagtatttgttgagggtaaagttggaagaaaaaaattaaagttgc 2459041  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||| ||| || ||||| ||||||    
T  2459040 attgaaaatgtaaagcgacattcattttgaaacaa 2459006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 146 - 319
Target Start/End: Original strand, 672209 - 672379
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||| ||| |||| |||||||||||||||||| | || |||||||| ||||||||||||||| ||||||||||||||||||||||| ||| | ||    
T  672209 aaaatgagtgtcgttttaaccaattgcacacagattatagaatggaataaagtagtcaaatatcatatcaattttactaaaataaccttac-ttataaga 672307  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
    | |||||||||||||| ||| |||||||| ||||||||  ||||||||| ||||||||||||| ||||||||||    
T  672308 aaaagacaaacttaaatttgcattgaaaattgtgtgag--agaaaagttagagtatttattgagggtaaagttg 672379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 375
Target Start/End: Original strand, 5854146 - 5854380
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| || |||||||||||||||||||||||||  ||  ||||||| |||| |||| ||||| |||||||||||||||||| ||||||||    
T  5854146 gtttcaaaatgagtgtcactttagccaattgcacacagattaaggaatagaataaagtagttaaatgtcataacaattttactaaaataactttacttta 5854245  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     | ||| ||||||| ||||| |||| |||||||| |||||||||  |||||||||||||||||||||| | |||||||| ||        |||||||||     
T  5854246 taagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaataaaaaaattaaagttgc 5854345  T
Q  341 attgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||| |||||||||| ||| |||||| | ||||||    
T  5854346 attggaaatgtaaagcgacatttattctgaaacaa 5854380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 141 - 297
Target Start/End: Original strand, 50591240 - 50591396
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| |||||||||||||||| |||||||||||  || |||||||| |||| |||| ||||| |||||||||||||||||||||| ||||    
T  50591240 gttttaaaatgagtgtcgctttagccaattgtacacagattaaggaatggaataaagtagtaaaatgtcataacaattttactaaaataaccttatttta 50591339  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
     | |||||||||||||||||| ||| |||||||| ||||||| | ||||||||||||    
T  50591340 taggaacaagacaaacttaaaattgcattgaaaattgtgtgatagagaaaagttgga 50591396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 142 - 284
Target Start/End: Complemental strand, 49895011 - 49894869
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||  || |||||||||||||||||| ||||| |||||||||||||||||||||||||||     
T  49895011 ttttaaaatgagtgtcgttttggccaattgcacacagattaaggaatggaataaaatagtcaaatgtcataacaattttactaaaataaccttactttat 49894912  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    | ||| |||||||||||||||||  |||||||| |||||||||    
T  49894911 aagaataagacaaacttaaagttacattgaaaattgtgtgaga 49894869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 146 - 374
Target Start/End: Original strand, 11134387 - 11134614
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||| ||| |||||||||||||||||| |||||  || |||||||| ||||||||| ||||  || ||||||||||||| ||||||||||  |||    
T  11134387 aaaatgagtgtcgttttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatgacagttttactaaaatagccttactttatttga 11134486  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattga 345  Q
      |||||||||||| ||||| |||| ||| |||| |||| ||||||||||||||||||||||| || ||||||| ||        ||||||||| |||||    
T  11134487 caaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagtatttattgagggcaaagttggaa-aaagaaattaaagttgcattga 11134585  T
Q  346 aaatgtaaagtgacgtttattttaaaaca 374  Q
    |||||||||||||| || ||||| |||||    
T  11134586 aaatgtaaagtgacattcattttgaaaca 11134614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 160 - 355
Target Start/End: Complemental strand, 44024758 - 44024563
Alignment:
Q  160 tttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaactta 259  Q
    ||||||||||  |||||  ||||| ||| | |||||| |||| |||| | |||||||||||||||||||||||||| |||| | | ||||||||||||||    
T  44024758 tttagccaataacacacgcattaagaaatgtaataaagtagttaaatgttatagcaattttactaaaataaccttattttatagggacaagacaaactta 44024659  T
Q  260 aagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaag 355  Q
    |||||  |||||||| ||||||||| |||||||||| |||||||||||| |||||||||| |||       ||||||||| |||||||||||||||    
T  44024658 aagttaaattgaaaattgtgtgagagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaag 44024563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 128 - 359
Target Start/End: Original strand, 28751317 - 28751546
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    ||||||||  ||||||| ||||||||| ||| ||||||||||||||||||||||||  || | ||||||||| |||     |||| || ||||||||||     
T  28751317 tattactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaaataatcattagacataacatttttactaaac 28751416  T
Q  228 taaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnn 327  Q
    |  |||||||||| | ||| | |||||||||||||||  |||||||| |||| |||  ||||||||| ||||||||||||| |||||||||| |||        
T  28751417 tgcccttactttataagaaaaggacaaacttaaagttacattgaaaattgtgcgag--agaaaagtttgagtatttattgagggtaaagttggaagaaaa 28751514  T
Q  328 nnnttaaagttgtattgaaaatgtaaagtgac 359  Q
       |||||||||||||||||||||||||||||    
T  28751515 aaattaaagttgtattgaaaatgtaaagtgac 28751546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 192 - 375
Target Start/End: Original strand, 17806348 - 17806529
Alignment:
Q  192 ataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaa 291  Q
    ||||| |||| |||| ||||| |||||||||||||||||| || ||||| | ||| |||||||||||||| ||| |||||||| ||| ||||  ||||||    
T  17806348 ataaagtagttaaatgtcataacaattttactaaaataactttcctttataagaaaaagacaaacttaaaattgcattgaaaattgtatgag--agaaaa 17806445  T
Q  292 gttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||||| ||| |||       |||||||||||||| |||||||||| |||  | ||||||||||||    
T  17806446 gttggagtatttattgaaggtaaaattggaagtaaaaaattaaagttgtattggaaatgtaaagcgacactcattttaaaacaa 17806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 131 - 300
Target Start/End: Original strand, 9552269 - 9552436
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| ||| |||||||||| ||| |||  |||| |||||| ||| |||||||  || | |||||| ||||||||| |||||||||||||||||||||||    
T  9552269 tactccatccgttttaaaataagtgtcg--ttagtcaattgtacatagattaatgaatgaaataaagtagtcaaatgtcatagcaattttactaaaataa 9552366  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagta 300  Q
     ||||||||| | ||||||||||| |||||||||| |||||||| | ||||||| | ||||||| |||||    
T  9552367 acttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgagagaaaaaagtttgagta 9552436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 11650212 - 11650056
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||||||||||||| |||| ||| |||||||||  ||||| |||||||||||||||| |||||||    
T  11650212 ttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaattgtgtgaga--gaaaaattggagtatttattgagggtaaag 11650115  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       ||||||||||||||||||||||||||||| || ||||| ||||||    
T  11650114 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 237 - 375
Target Start/End: Complemental strand, 12002380 - 12002244
Alignment:
Q  237 tttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaag 336  Q
    |||| ||||| |||||||||||||||||| |||||||| ||||||||  | ||||||||||||||||||||||||||||| || |||       ||||||    
T  12002380 tttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgag--aaaaaagttggagtatttattgaaggtaaagctggaagaaaaaaattaaag 12002283  T
Q  337 ttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||| ||||||||| |||| || ||||||||||||    
T  12002282 ttgtattggaaatgtaaaatgacattcattttaaaacaa 12002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 248 - 370
Target Start/End: Complemental strand, 2245911 - 2245789
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    ||||||||||||||| || |||||||| ||||  ||| ||||||||| ||||||||||||| ||||||||||||||       |||||||||||||||||    
T  2245911 aagacaaacttaaagatgcattgaaaattgtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaagttgtattgaaa 2245812  T
Q  348 atgtaaagtgacgtttattttaa 370  Q
    |||||| ||||| || |||||||    
T  2245811 atgtaaggtgacattcattttaa 2245789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 15823265 - 15823184
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||| |||| |||||||||||||||    
T  15823265 gttttaaaatgagtatcgttttagccaattgcacacatattaagaaatggaataaaatagttaaatgtcatagcaattttac 15823184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 141 - 358
Target Start/End: Original strand, 17919743 - 17919957
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||| ||||||||| ||||||||||||||| || |||||||||  || | ||| ||||| |||  || |||| || |||||||||| |  ||||  ||||    
T  17919743 gtttcaaaatgagtgtcgctttagccaattacatacagattaatgaatgaaatgaaataatcat-taacataacacttttactaaactgcccttgtttta 17919841  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgt 340  Q
     || || |||||||||||||||||| |||||||| ||||||||  | ||||||| |||||| |||||| |||||||||| |||       ||||||||||    
T  17919842 tattaaaaagacaaacttaaagttgcattgaaaattgtgtgag--aaaaaagttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgt 17919939  T
Q  341 attgaaaatgtaaagtga 358  Q
    |||| |||||||||||||    
T  17919940 attggaaatgtaaagtga 17919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 146 - 297
Target Start/End: Complemental strand, 9333305 - 9333160
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||||||| |||| ||||||  | |||||||||  || | |||||| ||||||||| |||||||||||||||||||| |||||||||||| | ||    
T  9333305 aaaatgagtatcgatttaaccaattatatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaacaaccttactttataaga 9333206  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
    | |||||||||      |||||||||||| ||||||||| | ||||||||||    
T  9333205 ataagacaaac------ttgtattgaaaattgtgtgagagataaaagttgga 9333160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 146 - 297
Target Start/End: Complemental strand, 9357078 - 9356933
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||||||| |||| ||||||  | |||||||||  || | |||||| ||||||||| |||||||||||||||||||| |||||||||||| | ||    
T  9357078 aaaatgagtatcgatttaaccaattatatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaacaaccttactttataaga 9356979  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
    | |||||||||      |||||||||||| ||||||||| | ||||||||||    
T  9356978 ataagacaaac------ttgtattgaaaattgtgtgagagataaaagttgga 9356933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 38132189 - 38132268
Alignment:
Q  218 tttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||    
T  38132189 tttactaaaataaccttactttataggaacaagacatacttaaagttgcattgaaaattgtgtgagaaagaaaagttgga 38132268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 131 - 284
Target Start/End: Original strand, 84430 - 84583
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||  ||  |||| ||||| |||     |||| || ||||||||||||      
T  84430 tactccatctgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgt 84529  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    |||||||||| | ||| |||||||||||||||||| |||||||| |||| ||||    
T  84530 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgcgaga 84583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 5317590 - 5317731
Alignment:
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    ||||| |||| | ||| |||||||||||||||||| |||||||| ||||   || |||||||||| |||||||||||| |||||||||| |||           
T  5317590 ccttattttataagaaaaagacaaacttaaagttgcattgaaaattgtg---gagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaa 5317686  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||| ||||||||||| || ||||| ||||||    
T  5317687 ttaaagttgtattgaaattgtaaagtgacattcattttgaaacaa 5317731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 49468636 - 49468712
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| ||||||||||||||||||||||||||||  || | |||||||||||||||| |||||||||||||||    
T  49468636 aaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaataaaatagtcaaatgtcatagcaattttac 49468712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 146 - 375
Target Start/End: Complemental strand, 6332392 - 6332164
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||| |||||||| ||||||||||||| ||||| |||  |||| ||||| |||     |||| || |||||||||| |  | ||  |||| ||||    
T  6332392 aaaatgagtgtcgctttaaccaattgcacacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatga 6332293  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaagttgtattg 344  Q
    | ||||||||| |||||||  |||||||| ||||||||| |  |||||||||||||||||| |  |||||||||||||        |||||||||| ||     
T  6332292 aaaagacaaacataaagttacattgaaaattgtgtgagaaa--aaagttggagtatttattaagagtaaagttgaaagaaaaaaaattaaagttgtgtta 6332195  T
Q  345 aaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||| || ||||||||||||    
T  6332194 aaaatgtaaagtgacattcattttaaaacaa 6332164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 233 - 374
Target Start/End: Complemental strand, 1429004 - 1428865
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnntt 332  Q
    |||||||| | ||| | |||||||||||||||| |||| ||| |||||||||  |||||||| ||||||||||||| |||||||||| |||       ||    
T  1429004 ttactttataagaaaaggacaaacttaaagttgaattggaaattgtgtgaga--gaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaatt 1428907  T
Q  333 aaagttgtattgaaaatgtaaagtgacgtttattttaaaaca 374  Q
     ||||||||||  |||||||||||||| || |||||||||||    
T  1428906 taagttgtattagaaatgtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 15698766 - 15698905
Alignment:
Q  234 tactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnntta 333  Q
    ||||||| | ||| |||| |||||||||||| ||||||||| | |||||||  |||||||| |||||||||||||  ||||||||| |||       |||    
T  15698766 tactttataagaaaaagataaacttaaagttctattgaaaattatgtgaga--gaaaagtttgagtatttattgagagtaaagttggaagaagaaaatta 15698863  T
Q  334 aagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||| |||| ||||||||| || ||||||||||||    
T  15698864 aagttgtattggaaatataaagtgacattcattttaaaacaa 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 297
Target Start/End: Original strand, 24040946 - 24041100
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||||||||||||||| ||||  ||||||  || ||||| ||||| |||     |||| || |||||||||| |  ||||||||||    
T  24040946 gttttaaaatgagtgtcgctttagccaatttcacatggattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttacttta 24041045  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
     | ||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||    
T  24041046 taagaaaaagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagttgga 24041100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 43755257 - 43755104
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||||||| ||||||||||||||||||||||||||| | || ||||| ||||| | || ||  | | || ||||||||||    |||||||| |    
T  43755257 gttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaataat-aattaaaaaaacacttttactaaatcgcccttacttaa 43755159  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttgga 297  Q
     | ||| ||||||||||||||||||| ||||||| ||||||||  ||||||||||||    
T  43755158 taagaaaaagacaaacttaaagttgttttgaaaattgtgtgag--agaaaagttgga 43755104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 237 - 368
Target Start/End: Complemental strand, 40719149 - 40719020
Alignment:
Q  237 tttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaag 336  Q
    |||| ||||| |||| ||| ||||||||||||||| || ||||| ||| |  ||||||||||||||||||||||||||||||| |||       ||||||    
T  40719149 tttatatgaaaaagataaatttaaagttgtattgagaattgtgtaagaaa--aaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaag 40719052  T
Q  337 ttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||| |||||||||| |||| || |||||    
T  40719051 ttgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 32806848 - 32806939
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| || |||| ||||||| | |||||||||||| ||||||||| |||||  || |||||||| ||||||||| |||||||||||||||    
T  32806848 tactctctccgtttcaaaatgattgtcgctttagccagttgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 32806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 15573844 - 15573763
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||| | ||| |||||||||||||||||| |||||| || |||||||| ||||||||| | |||||||||||||    
T  15573844 gtttcaaaatgaatgtcgttttagccaattgcacacaaattaaagaatggaataaagtagtcaaatgttatagcaattttac 15573763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 30686876 - 30686811
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataa 195  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||||||||||| ||| |||||||    
T  30686876 ttactccatctgttttaaaatgagtgtcgttttagctaattgcacacagattaagaaatggaataa 30686811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 48009241 - 48009160
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| ||| ||||| |||||||||||| |||||  || | ||||||||||||||||||||||| ||||||||    
T  48009241 gtttcaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaataaaatagtcaaatatcatagtaattttac 48009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 38530760 - 38530844
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaa 226  Q
    ||||||||||||| |||||||||||||||  | ||||||||| ||| | |||||| ||||||||| ||  |||||||||||||||    
T  38530760 ttttaaaatgagtgtcgctttagccaattatatacagattaagaaatgaaataaagtagtcaaatgtcgcagcaattttactaaa 38530844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 248 - 368
Target Start/End: Original strand, 45377179 - 45377297
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||||||||||||||||  |||||||| |||| ||||  ||||||||||||||| |||||| ||||||||||  ||        ||||||||||||| ||    
T  45377179 aagacaaacttaaagtttcattgaaaattgtgcgaga--gaaaagttggagtatctattgagggtaaagttgggagaaaaaaagtaaagttgtattggaa 45377276  T
Q  348 atgtaaagtgacgtttatttt 368  Q
    |||||||||||| || |||||    
T  45377277 atgtaaagtgacattcatttt 45377297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 31491680 - 31491771
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| || |||||||||||||| ||| |||||| ||||||| ||| ||| |  || |||||||| ||||||||| |||||||||||||||    
T  31491680 tactctctccgttttaaaatgagtgtcgttttagcaaattgcaaacatattcaggaatggaataaagtagtcaaatgtcatagcaattttac 31491771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 40717283 - 40717370
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaata 229  Q
    ||||||||| ||| ||| ||||  |||||||||||| ||||   || |||||||| ||||||||||||||||||||||||| ||||||    
T  40717283 ttttaaaataagtgtcgttttaatcaattgcacacatattacggaatggaataaagtagtcaaatatcatagcaattttaccaaaata 40717370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 274
Target Start/End: Original strand, 45749408 - 45749554
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    |||||||| ||| |||||||||||||| |||||||| | ||||||||||| |||| | || ||||||||||| |||     |||| || ||||||||||     
T  45749408 tattactccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaataatcattagacataacacttttactaaac 45749507  T
Q  228 taaccttactttacatgaacaagacaaacttaaagttgtattgaaaa 274  Q
       |||||||||| | ||| |||||||||||||| ||  ||||||||    
T  45749508 cgcccttactttataagaaaaagacaaacttaaatttacattgaaaa 45749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 25152041 - 25151960
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||| ||| || ||||| |||||||||||||||||||| ||  ||||||| ||||||||| |||||| ||||||||    
T  25152041 gtttcaaaataagtgtcactttaaccaattgcacacagattaaagaatagaataaagtagtcaaatgtcatagtaattttac 25151960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 50349892 - 50349950
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattga 308  Q
    |||||||||||||||||| |||||||| ||||||||  ||||||||| |||||||||||||    
T  50349892 aagacaaacttaaagttgcattgaaaattgtgtgag--agaaaagtttgagtatttattga 50349950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 43738319 - 43738408
Alignment:
Q  286 agaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||| ||| ||||||||||||  |||||||||||||       || |||||||||||||||||| ||||||| || ||||||||||||    
T  43738319 agaaaaattgaagtatttattgagagtaaagttgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaacaa 43738408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 52125045 - 52125137
Alignment:
Q  130 ttactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| ||| |||||||||||||| ||| |||||||||||| | ||| | ||| ||| | |||||| ||||||||| || ||||||||||||    
T  52125045 ttactccatccgttttaaaatgagtgtcgttttagccaattgtatacataataagaaatgtaataaagtagtcaaatgtcgtagcaattttac 52125137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 359
Target Start/End: Complemental strand, 52403616 - 52403490
Alignment:
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    |||||||||| | | | |||||||| ||||||||| | |||||| | ||||||| ||||  ||| ||||||||||||| |||||||||| ||            
T  52403616 ccttactttataaggaaaagacaaaattaaagttgcactgaaaattatgtgagagagaa--gtttgagtatttattgagggtaaagttggaatagaaaac 52403519  T
Q  331 ttaaagttgtattgaaaatgtaaagtgac 359  Q
    ||||||||||||||||||| |||||||||    
T  52403518 ttaaagttgtattgaaaatttaaagtgac 52403490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 5463816 - 5463725
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||| | |||||  || | |||||| ||||||| | ||||| |||||||||    
T  5463816 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgcaataaagtagtcaattgtcataacaattttac 5463725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 10843021 - 10842930
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||| ||||||||| ||| ||||| |||||||||| | |||||  || | |||||| ||||||||| |||||||||||||||    
T  10843021 tactccatccgtttcaaaatgagtgtcgttttagtcaattgcacaaatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 10842930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 35847846 - 35847937
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| ||||| |||||||| ||||||||  |||||||||||| |||||  ||  ||||||| ||||||||| ||||| |||||||||    
T  35847846 tactccatccgttttgaaatgagtgtcgctttactcaattgcacacatattaaggaattgaataaagtagtcaaatgtcataacaattttac 35847937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 37437402 - 37437469
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    |||||||||| |  |||||||||| | ||| |||||||||||||||||| |||||||| |||||||||    
T  37437402 ttttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 37437469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 43929822 - 43929739
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttg 319  Q
    |||||||| | ||| ||||| ||||||||||||||| ||||| | ||||||  ||||||| ||||||||||||||| ||||||||||    
T  43929822 ttactttataagaaaaagactaacttaaagttgtatcgaaaattatgtgag--agaaaag-tggagtatttattgagggtaaagttg 43929739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 49426329 - 49426420
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||| ||||||||| ||||||||| |||||||||||| |||||  || ||||| || ||||||||| | ||| |||||||||    
T  49426329 tactccatccgtttcaaaatgagtgtcgctttaggcaattgcacacatattaaggaatggaatgaagtagtcaaatgtgatatcaattttac 49426420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 84604 - 84681
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaannnnnnnnatctaaagtgacactcaatttaaaa 408  Q
    |||||||||||||| |||||||||||||| || ||||||||||||          |||||||||||||||||||||||    
T  84604 ttaaagttgtattggaaatgtaaagtgacattcattttaaaacaatttttttttgctaaagtgacactcaatttaaaa 84681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 43358134 - 43358215
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||| | ||| ||||| |||||| ||| | |||||  || | |||||||||||||||| |||||||||||||||    
T  43358134 gttttaaaatgaatgtcgttttagtcaattgtacatatattaaggaatgaaataaaatagtcaaatgtcatagcaattttac 43358215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 43755095 - 43755058
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    |||||||||||||||||||||||||||||||| |||||    
T  43755095 ttaaagttgtattgaaaatgtaaagtgacgttcatttt 43755058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 48025174 - 48025255
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||||  || |||||||| ||||||||||||| ||||   || |||||||| |||||||||||  ||||||||||||    
T  48025174 gttttaaaataggtgtcgctttaaccaattgcacacacattatggaatggaataaagtagtcaaatattgtagcaattttac 48025255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 24041111 - 24041155
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||    
T  24041111 ttaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 26582967 - 26582923
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| ||||||||||| || |||||||||||||||    
T  26582967 ttaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 375
Target Start/End: Complemental strand, 44583912 - 44583770
Alignment:
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    ||||| |||| | ||| ||||||||||||| |||| |||||||| | ||||| |  |||||||| ||||| ||||| | ||||||||   |||           
T  44583912 ccttattttataagaaaaagacaaacttaatgttgcattgaaaactatgtgaaa--gaaaagttagagtacttattaagggtaaagtcagaagaaaaaaa 44583815  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||||    
T  44583814 ttaaagttgtattaaaaatgtaaggtgacattcattttaaaacaa 44583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 48319927 - 48319979
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaat 193  Q
    |||| ||||||||| |||||||||||||||||||||| ||||| ||| |||||    
T  48319927 gtttcaaaatgagtgtcgctttagccaattgcacacatattaagaaatggaat 48319979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 17805765 - 17805808
Alignment:
Q  140 tgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||    
T  17805765 tgtttcaaaatgagtgtcgctttagccaattgcacgcagattaa 17805808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 48259772 - 48259827
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||||||  || |||| ||||||||| ||| ||||||||||||||||||||||||    
T  48259772 tattactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaa 48259827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 6377208 - 6377242
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcaca 175  Q
    |||||||||||||| ||||||||||||||||||||    
T  6377208 gttttaaaatgagtgtcgctttagccaattgcaca 6377242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 13408256 - 13408298
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    |||||||||||||| ||| |||||||||||||||||| |||||    
T  13408256 gttttaaaatgagtgtcgttttagccaattgcacacaaattaa 13408298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 9915675 - 9915594
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| ||||||||| ||| |||||| |||  |||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  9915675 gtttcaaaatgagtgtcgttttagctaataacacacatattaaggaatgtaataaagtagtcaaatgtcatagcaattttac 9915594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 15646992 - 15647037
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||||||||||||||| ||| ||||| |||||||||||| |||||    
T  15646992 tctgttttaaaatgagtgtcgttttagtcaattgcacacaaattaa 15647037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 40061007 - 40061044
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||||||||||||||||||||||| || |||||    
T  40061007 ttaaagttgtattgaaaatgtaaagtgacattcatttt 40061044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 50158417 - 50158454
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||||||||||||||||||||||| || |||||    
T  50158417 ttaaagttgtattgaaaatgtaaagtgacattcatttt 50158454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 6377306 - 6377373
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagtt 318  Q
    ||||||||||||||| |||||| |||| | || ||||   |||||||| |||||||||||||| |||||||    
T  6377306 aagacaaacttaaagctgtattaaaaattatgcgaga---aaaagttgtagtatttattgaagataaagtt 6377373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 9552440 - 9552484
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| ||||||||| |||| || ||||||||||||    
T  9552440 ttaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 10690984 - 10691020
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    |||||||||||||||||| |||||||| |||||||||    
T  10690984 aagacaaacttaaagttgcattgaaaattgtgtgaga 10691020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 12851972 - 12851920
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||| ||| |||||||||| ||| ||||||||||||||| |||| |||||||    
T  12851972 tactccatccgttttaaaataagtgtcgctttagccaattacacaaagattaa 12851920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 38132278 - 38132322
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| || ||||| ||||||    
T  38132278 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 38132322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 284
Target Start/End: Original strand, 43105511 - 43105667
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    ||||||||| ||| ||||||||||| | ||| ||||| | ||||||| || ||||| |||  |||| ||||| |||     |||| || ||||||||||     
T  43105511 tattactctctctattttaaaatgaatgtcgttttagactattgcacgcatattaagaaattgaatgaaataatcattagacataacacttttactaaat 43105610  T
Q  228 taaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    || | ||| |||| | ||| |||||||||||||| ||| |||||||| || ||||||    
T  43105611 taccattattttataagaaaaagacaaacttaaaattgcattgaaaattgcgtgaga 43105667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 43105692 - 43105732
Alignment:
Q  332 taaagttgtattgaaaatgtaaagtgacgtttattttaaaa 372  Q
    |||||||||||||||||||||| ||||| || |||||||||    
T  43105692 taaagttgtattgaaaatgtaaggtgacattcattttaaaa 43105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 46286743 - 46286819
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| ||| ||||  |||||||||||| ||||| |||  ||||||| ||| ||||| |||||||| ||||||    
T  46286743 aaaatgagtgtcgttttaatcaattgcacacatattaagaaatagaataaagtagacaaatgtcatagcacttttac 46286819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 48259964 - 48260008
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||| |||||||||||||| || ||||| ||||||    
T  48259964 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 48320100 - 48320144
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||| ||||||||||||| |||||| || |||||||||||||||    
T  48320100 ttaaatttgtattgaaaatataaagtaacatttattttaaaacaa 48320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 50094464 - 50094380
Alignment:
Q  138 tctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||| |||||||||||| |||||||| |||||||||| || |||||  ||  ||||||| |||| |||| | |||| ||||||||    
T  50094464 tctgatttaaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaagtagttaaatgtaatagtaattttac 50094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 1e-58; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 142 - 375
Target Start/End: Original strand, 17345061 - 17345290
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttac 241  Q
    ||||||||||||| |||||||||||||||||||||    |||  || |||||||| ||||| ||| |||||||||||||||||||||||||||||||||     
T  17345061 ttttaaaatgagtgtcgctttagccaattgcacac----taaggaatggaataaagtagtcgaatgtcatagcaattttactaaaataaccttactttat 17345156  T
Q  242 atgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgta 341  Q
    | ||||||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||       |||||||||||    
T  17345157 aagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaatattaaagttgta 17345256  T
Q  342 ttgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||  |||||||||||||  || ||||||||||||    
T  17345257 ttagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 191 - 375
Target Start/End: Complemental strand, 34576726 - 34576542
Alignment:
Q  191 aataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaa 290  Q
    |||||| |||||| || ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||    
T  34576726 aataaagtagtcagatgtcataacaattttactaaaataactttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaa 34576627  T
Q  291 agttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||| |||||||||||| | |||||||| |||       |||||||||||||| ||||||||| |||  || ||||||||||||    
T  34576626 agttgaagtatttattgaggataaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 318
Target Start/End: Complemental strand, 25932861 - 25932684
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttacttta 240  Q
    |||||||||| ||| ||| ||||||||||| ||||| |||||| ||| | |||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  25932861 gttttaaaataagtgtcgttttagccaattacacaccgattaagaaatgaaataaagtagttaaatgtcatagcaattttactaaaataaccttacttta 25932762  T
Q  241 catgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagtt 318  Q
     |  ||||||||||||||||||||  |||||||| ||||||||| | ||||||| ||||||||||||| | |||||||    
T  25932761 tagcaacaagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatttattgaggataaagtt 25932684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 131 - 375
Target Start/End: Complemental strand, 6143326 - 6143082
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||||||||||||| ||| |||   ||||| || |||||||| ||||||||||||| | |||||| ||| ||||| | |||||||||||||||||||||    
T  6143326 tactctatctgtttttaaacgagggacgcttcaggcaattgcaaacagattaaaaaatgaaataaagtagacaaattttatagcaattttactaaaataa 6143227  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    | |||||||| ||||| |||| |   ||||| ||| ||| |||| ||||| ||| | |||||||  ||||||||||||||||||||||| |||           
T  6143226 ctttactttatatgaaaaagatatgtttaaaattgcattaaaaattgtgtaagagaaaaaagtttaagtatttattgaaggtaaagttggaagaaaaaaa 6143127  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||| ||||||||| |||| || ||||||||||||    
T  6143126 ttaaagttgaattggaaatgtaaaatgacattcattttaaaacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 131 - 375
Target Start/End: Complemental strand, 6140841 - 6140598
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataa 230  Q
    ||||||||||||||| |||  ||   ||||| || |||||||| ||||||||||||| | |||||| ||| ||||| | |||||||||||||||||||||    
T  6140841 tactctatctgtttttaaactagggacgcttcaggcaattgcaaacagattaaaaaatgaaataaagtagacaaattttatagcaattttactaaaataa 6140742  T
Q  231 ccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnn 330  Q
    | |||||||| ||||| |||| |   ||||| ||| |||||||| ||||| ||| |||||||||  ||||||||||||||||||||||| |||           
T  6140741 ctttactttatatgaaaaagatatgtttaaaattgcattgaaaattgtgtaagagagaaaagtttaagtatttattgaaggtaaagttggaag-aaaaaa 6140643  T
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||| |||||||||| ||| || ||||||||||||    
T  6140642 ttaaagttgaattggaaatgtaaagcgacattcattttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 149 - 354
Target Start/End: Complemental strand, 26189733 - 26189527
Alignment:
Q  149 atgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaaca 248  Q
    |||||| ||||||||| ||||||||||||  ||||  || | |||||| |||| |||| ||||||||||| ||||||||||||||||||||| | ||| |    
T  26189733 atgagtgtcgctttagacaattgcacacatgttaaggaatgaaataaagtagttaaatgtcatagcaattatactaaaataaccttactttataagaaaa 26189634  T
Q  249 aga-caaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    | | |||||||||||||| |||||||| |||||| || |||||| |||||||||||||||| |||||||||| |||       ||||||||| |||| ||    
T  26189633 aaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaatattaaagttgcattggaa 26189534  T
Q  348 atgtaaa 354  Q
    |||||||    
T  26189533 atgtaaa 26189527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 143 - 265
Target Start/End: Complemental strand, 6992631 - 6992509
Alignment:
Q  143 tttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttaca 242  Q
    ||||||||||||   ||||||| |||||||||||||||||| ||| | ||||||||||||||| ||||||| |||||||||||||||||||||||||| |    
T  6992631 tttaaaatgagtggtgctttagtcaattgcacacagattaagaaatgaaataaaatagtcaaacatcatagtaattttactaaaataaccttactttata 6992532  T
Q  243 tgaacaagacaaacttaaagttg 265  Q
     ||| ||||||||||||||||||    
T  6992531 agaaaaagacaaacttaaagttg 6992509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 217 - 375
Target Start/End: Original strand, 12828679 - 12828835
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| ||||||| |||||||||| |||||||| |||||||||  ||||||||| |||||||||||| |||||||    
T  12828679 ttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgaga--gaaaagttgaagtatttattgagggtaaag 12828776  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||| |||       |||||||||||||| |||||||||||||  || ||||| ||||||    
T  12828777 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 172 - 375
Target Start/End: Complemental strand, 29927407 - 29927205
Alignment:
Q  172 cacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattga 271  Q
    ||||||||||||||||  |||| ||||| |||     |||| || ||||||||| ||| |||||||||| | ||| |||||||||||||||||| |||||    
T  29927407 cacacagattaaaaaatagaatgaaataatcattagacataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattga 29927308  T
Q  272 aaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaa 370  Q
    ||| |   ||||  ||||||||||||||||||||||| |||||||||| |||        |||||||||||||| |||||||||||||| || ||||| |    
T  29927307 aaactacatgag--agaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 29927210  T
Q  371 aacaa 375  Q
    |||||    
T  29927209 aacaa 29927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 375
Target Start/End: Original strand, 31275659 - 31275796
Alignment:
Q  237 tttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnttaaa 335  Q
    |||| ||||| |||||||||||||||||| |||||||| ||||||||  | ||||||||||||||||||||| |||||||||| |||        |||||    
T  31275659 tttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgag--aaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaa 31275756  T
Q  336 gttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||||||||||||| || ||||| ||||||    
T  31275757 gttgtattggaaatgtaaagtgacattcattttgaaacaa 31275796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 4123888 - 4124009
Alignment:
Q  251 acaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatg 350  Q
    ||||||||||| ||| |||||||| ||||||| |  |||||||||||||||||||||| ||||||||||||||       ||||||||||||| ||||||    
T  4123888 acaaacttaaa-ttgcattgaaaattgtgtgaaa--gaaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatg 4123984  T
Q  351 taaagtgacgtttattttaaaacaa 375  Q
    ||||||||| || ||||| ||||||    
T  4123985 taaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 30627211 - 30627089
Alignment:
Q  251 acaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatg 350  Q
    ||||| ||||||||| |||||||| ||| |||||  |||||||| ||||||||||||| ||||||||||| ||       |||||||||||||||||||     
T  30627211 acaaatttaaagttgcattgaaaattgtttgaga--gaaaagtttgagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattgaaaata 30627114  T
Q  351 taaagtgacgtttattttaaaacaa 375  Q
    ||||||||| |||||||| ||||||    
T  30627113 taaagtgacatttattttgaaacaa 30627089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 233 - 375
Target Start/End: Complemental strand, 29915680 - 29915539
Alignment:
Q  233 ttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag-nnnnnnnt 331  Q
    |||||||| | ||| ||||||||| |||||||| |||| ||| |||||||||  |||||||||||||||||||||| |||||||||| |||        |    
T  29915680 ttactttataagaaaaagacaaacataaagttgcattggaaattgtgtgaga--gaaaagttggagtatttattgagggtaaagttggaagaaaaaaaat 29915583  T
Q  332 taaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||| |||||||||||||| || ||||| ||||||    
T  29915582 taaagttgtattggaaatgtaaagtgacattcattttgaaacaa 29915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 288 - 375
Target Start/End: Original strand, 4132042 - 4132129
Alignment:
Q  288 aaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    ||||||||||||||||||||| ||||||||||||||       ||||||||||||| ||||||||||||||| || ||||||||||||    
T  4132042 aaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 24163625 - 24163716
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacaca-gattaaaaaacggaataaaatagtcaaatatcatagcaatttta 221  Q
    ||||| ||| |||||||| ||||| ||| ||||||||||||||||||  ||||| ||| | |||||||||||||||| ||||||||||||||    
T  24163625 tactccatccgttttaaagtgagtgtcgttttagccaattgcacacataattaagaaatgaaataaaatagtcaaatgtcatagcaatttta 24163716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 218 - 375
Target Start/End: Original strand, 10494760 - 10494916
Alignment:
Q  218 tttactaaaataaccttactttacatgaacaa-gacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    ||||||||| || |||||||||| | ||| || ||||||||| |||||| |||||||| ||| |||||  ||||||||||| ||||||||   || ||||    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtatgaga--gaaaagttggactatttattttgggcaaag 10494857  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||       ||||||||| |||| ||||||||| |||| || ||||||||||||    
T  10494858 ttgaaagaaaaaaattaaagttgaattggaaatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 248 - 359
Target Start/End: Original strand, 11785132 - 11785240
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    |||| ||| |||||||||||||||||| ||||||||  ||||||||| || |||||||||| |||||||||| |||       |||||||||||||| ||    
T  11785132 aagataaatttaaagttgtattgaaaattgtgtgag--agaaaagttagaatatttattgagggtaaagttggaag-aaaaaattaaagttgtattggaa 11785228  T
Q  348 atgtaaagtgac 359  Q
    ||||||||||||    
T  11785229 atgtaaagtgac 11785240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 32258838 - 32258720
Alignment:
Q  257 ttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggt-aaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaag 355  Q
    ||||||||| |||||||| ||||||||| | |||||||||||||||| ||  |||| ||||||| |||       |||||||||||||||||||||||||    
T  32258838 ttaaagttgcattgaaaattgtgtgagaga-aaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaag 32258740  T
Q  356 tgacgtttattttaaaacaa 375  Q
    |||| || ||||| ||||||    
T  32258739 tgacattcattttgaaacaa 32258720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 19675209 - 19675128
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||  ||  ||||||| ||||||||| |||||||||||||||    
T  19675209 gttttaaaatgagtgtcgctttaaccaattgaacacatattaaggaattgaataaagtagtcaaatgtcatagcaattttac 19675128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 1135166 - 1135075
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||| || |||| ||||| ||| | |||||||||||||||||||| |||||  || |||||||| ||||||||| ||||| |||||||||    
T  1135166 tactctctccgtttcaaaataagtgttgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatatcaattttac 1135075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 26669096 - 26669245
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| ||||||||| |||||||| | |||||||  ||||||||||||  |||||||| | |||||    
T  26669096 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--gaaaagttggagattttattgaggataaag 26669193  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||| | |       |||||||||||||| |||| ||||||||| || |||||    
T  26669194 ttggatgacaaaaattaaagttgtattggaaatataaagtgacattcatttt 26669245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 10520316 - 10520393
Alignment:
Q  145 taaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||| |||||||| ||||||| ||||| |||||  || | |||||| ||||||||| |||||||||||||||    
T  10520316 taaaatgagtgtcgctttaaccaattgtacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 10520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 23259247 - 23259328
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| |||||| | |||||||||| ||||||||||||||||| ||| | |||||| ||||||||| || || |||||||||    
T  23259247 gttttgaaatgaatttcgctttagctaattgcacacagattaagaaatgaaataaagtagtcaaatgtcgtaacaattttac 23259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 24555854 - 24555930
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| |||||||| | ||||||| ||||||||| |||  ||||||| ||||||||| || ||||||||||||    
T  24555854 aaaatgagtgtcgctttaacaaattgcatacagattaagaaatagaataaagtagtcaaatgtcgtagcaattttac 24555930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 375
Target Start/End: Complemental strand, 8052467 - 8052343
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaa 347  Q
    ||||||||| |||||||| |||||||| |||| ||||  ||| |||||||||||||||||| |||||| |||  ||       |||||||||||||  ||    
T  8052467 aagacaaacctaaagttgcattgaaaattgtgggaga--gaatagttggagtatttattgagggtaaaattgggag-aaaaaattaaagttgtattagaa 8052371  T
Q  348 atgtaaagtgacgtttattttaaaacaa 375  Q
    || ||||||||| || ||||||||||||    
T  8052370 atataaagtgacattcattttaaaacaa 8052343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 375
Target Start/End: Original strand, 34439438 - 34439567
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagaca---gaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattg 344  Q
    ||||||||| |||||||| |||| ||| ||||| ||| |   ||||||||||||||| ||||||||||||||||| |||       | ||||||||||||    
T  34439438 aagacaaacataaagttgcattggaaattgtgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaag-aaagaatgaaagttgtattg 34439536  T
Q  345 aaaatgtaaagtgacgtttattttaaaacaa 375  Q
     ||||||||| |||| || ||||| ||||||    
T  34439537 gaaatgtaaaatgacattcattttgaaacaa 34439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 1924774 - 1924818
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||||| |||| || ||||||||||||    
T  1924774 ttaaagttgtattgaaaatgtaaaatgacattcattttaaaacaa 1924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 3015958 - 3015921
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||||||||||||||||||||||||||||| || |||||    
T  3015958 ttaaagttgtattgaaaatgtaaagtgacattcatttt 3015921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 183
Target Start/End: Complemental strand, 9940873 - 9940836
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaa 183  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  9940873 aaaatgagtattgttttagccaattgcacacagattaa 9940836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 29713328 - 29713393
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaat 206  Q
    |||||||||||||| ||||||||| |||||||||||  |||||  || ||||| || |||||||||    
T  29713328 gttttaaaatgagtgtcgctttagtcaattgcacacgtattaaggaatggaatcaagtagtcaaat 29713393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 234256 - 234196
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagt 201  Q
    |||| ||||||||| ||| |||| |||||||||||| ||||||| || |||||||| ||||    
T  234256 gtttcaaaatgagtgtcgttttaaccaattgcacacggattaaagaatggaataaagtagt 234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 30626911 - 30626867
Alignment:
Q  331 ttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||||||||||||||||||| |  |||||||| ||||||    
T  30626911 ttaaagttgtattgaaaatgtaaagtaatatttattttgaaacaa 30626867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 34513580 - 34513652
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatag 213  Q
    |||||||||| ||| ||| |||||| ||||||||||| ||||| ||| |||||||| |||  |||| ||||||    
T  34513580 gttttaaaataagtgtcgttttagctaattgcacacatattaagaaatggaataaagtagctaaatgtcatag 34513652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 113; Significance: 7e-57; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 146 - 375
Target Start/End: Complemental strand, 321953 - 321724
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaataaccttactttacatga 245  Q
    ||||||||| |||||||||| |||||||||| | ||||  || |||||||| |||||||||||||||| |||||||||||||||||||||||||| | ||    
T  321953 aaaatgagtgtcgctttagctaattgcacacgggttaaggaatggaataaagtagtcaaatatcatagtaattttactaaaataaccttactttatagga 321854  T
Q  246 acaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattga 345  Q
    |||||||||||||||| ||| |||||||| |||||||||  |||||||| ||||| ||||||| |||||||||| |||       ||||||||||||||     
T  321853 acaagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagtaattattgagggtaaagttggaagaaaaaaattaaagttgtattgg 321754  T
Q  346 aaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||| ||| || ||||||||||||    
T  321753 aaatgtaaagcgacattcattttaaaacaa 321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 24652 - 24743
Alignment:
Q  131 tactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||| ||| |||||||||||||| |||||||||||| ||| ||||| |||||  || |||||||||||||||||| |||||||||||||||    
T  24652 tactccatccgttttaaaatgagtgtcgctttagccatttgtacacatattaaggaatggaataaaatagtcaaatgtcatagcaattttac 24743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 4140 - 4263
Alignment:
Q  250 gacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaat 349  Q
    |||||||||||||||  |||||||| | |||||||  |||||||||||||||||||||| | |||||||| |||       ||||| |||||||  ||||    
T  4140 gacaaacttaaagtttgattgaaaattatgtgaga--gaaaagttggagtatttattgaggataaagttggaagaaaaaaattaaaattgtattagaaat 4237  T
Q  350 gtaaagtgacgtttattttaaaacaa 375  Q
    ||||||| || |||||||||||||||    
T  4238 gtaaagtaacatttattttaaaacaa 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 250 - 370
Target Start/End: Original strand, 16070 - 16188
Alignment:
Q  250 gacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaat 349  Q
    |||||||||||||||| |||||||| ||||||||  ||||| |||||| |||||||||| |||||||||  |||       ||||||||||||| |||||    
T  16070 gacaaacttaaagttgcattgaaaattgtgtgag--agaaaggttggaatatttattgagggtaaagtttgaagaaaaaaattaaagttgtattaaaaat 16167  T
Q  350 gtaaagtgacgtttattttaa 370  Q
     ||||| ||| ||||||||||    
T  16168 ataaagagacatttattttaa 16188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 128 - 284
Target Start/End: Original strand, 11991 - 12146
Alignment:
Q  128 tattactctatctgttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttactaaaa 227  Q
    ||||||||  || |||| ||||||||| |||||||||| ||||||||| |||||||  || ||||| ||||| |||     |||| || ||||||||||     
T  11991 tattactccctccgtttcaaaatgagtgtcgctttagcgaattgcacagagattaaggaatggaatgaaataatcattagacataacacttttactaaac 12090  T
Q  228 taaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgaga 284  Q
    |  |||||||||| | ||| |||||||||||||||||| |||||||| |||||||||    
T  12091 tg-ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 12146  T

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Target: scaffold0048 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 62859 - 62783
Alignment:
Q  146 aaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    ||||||||| |||||||||||||||||||||| |||||  || |||||||| ||||||||| ||||| |||||||||    
T  62859 aaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcataacaattttac 62783  T

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Target: scaffold0078 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 1371 - 1448
Alignment:
Q  142 ttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattt 219  Q
    ||||||||||||| || |||||| ||||||||||||||||||  || | |||||| ||||||||| ||||||||||||    
T  1371 ttttaaaatgagtgtcactttagtcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 1448  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 21003 - 21084
Alignment:
Q  141 gttttaaaatgagtatcgctttagccaattgcacacagattaaaaaacggaataaaatagtcaaatatcatagcaattttac 222  Q
    |||||||||| ||| |||||||||||||||||||| |||||||  ||   |||||||||||||||  |||||||||||||||    
T  21003 gttttaaaattagtgtcgctttagccaattgcacatagattaaggaataaaataaaatagtcaaacgtcatagcaattttac 21084  T

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Target: scaffold0189 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 13124 - 13213
Alignment:
Q  286 agaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttattttaaaacaa 375  Q
    |||||||||| |||||||||||| ||||||||||  ||       ||||| |||||||| ||||||||||||||||| ||||||||||||    
T  13124 agaaaagttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgtattggaaatgtaaagtgacgttcattttaaaacaa 13213  T

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Target: scaffold0519 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 7732 - 7852
Alignment:
Q  251 acaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaagnnnnnnnttaaagttgtattgaaaatg 350  Q
    ||||||||||||||| |||||||| ||||||||  |||||||||| ||||||||||||   |||||||| |||       | ||||||||||| ||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgtgag--agaaaagttgaagtatttattgagattaaagttggaag-aaaaattaaaagttgtatt-aaaatg 7827  T
Q  351 taaagtgacgtttattttaaaacaa 375  Q
    ||||||||| || ||||||||||||    
T  7828 taaagtgacattcattttaaaacaa 7852  T

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Target: scaffold0119 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 1697 - 1548
Alignment:
Q  217 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaag 316  Q
    |||||||||| |  |||||||||| | ||| |||||||| ||||||||| |||||||| | |||||||  ||||||||||||  |||||||| | |||||    
T  1697 ttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--gaaaagttggagattttattgaggataaag 1600  T
Q  317 ttgaaagnnnnnnnttaaagttgtattgaaaatgtaaagtgacgtttatttt 368  Q
    ||| | |       |||||||||||||| |||| ||||||||| || |||||    
T  1599 ttggatgacaaaaattaaagttgtattggaaatataaagtgacattcatttt 1548  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 158223 - 158151
Alignment:
Q  248 aagacaaacttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaa 322  Q
    |||||||||||||||||| |||||||| | || ||||  ||||||||| |||||||||||| |||||||||||||    
T  158223 aagacaaacttaaagttgcattgaaaattatgcgaga--gaaaagttgtagtatttattgagggtaaagttgaaa 158151  T

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Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 8274 - 8156
Alignment:
Q  257 ttaaagttgtattgaaaagtgtgtgagacagaaaagttggagtatttattgaaggtaaagttgaaag--nnnnnnnttaaagttgtattgaaaatgtaaa 354  Q
    |||||||||  ||||||| |||||||||  ||||||||||||||||| |||| | ||||||||||||         ||||||||||||||||||||||||    
T  8274 ttaaagttgctttgaaaattgtgtgaga--gaaaagttggagtattttttgaggttaaagttgaaagaaaaaaaaattaaagttgtattgaaaatgtaaa 8177  T
Q  355 gtgacgtttattttaaaacaa 375  Q
     |||| || ||||| ||||||    
T  8176 ttgacattcattttgaaacaa 8156  T

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