View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3863_low_58 (Length: 238)
Name: NF3863_low_58
Description: NF3863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3863_low_58 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 51152064 - 51151827
Alignment:
| Q |
1 |
atgacattttcagcagatgaatgagaaggagaagggtcaagacccttaggagggaaagttataaggaaaggtgaagaaggtgaagaatgtcttgcaacaa |
100 |
Q |
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| T |
51152064 |
atgacattttcagcagatgaatgagaaggagaagggtcaagacccttaggagggaaagttataaggaaaggtgaagaaggtgaagaatgtcttgcaacaa |
51151965 |
T |
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| Q |
101 |
aaagcttaatagcagcagctacagcattcaaagagtgaaaatatttacaatgagcttcagcaagtgcatatcttttctctacagctagtttcagctgacg |
200 |
Q |
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| T |
51151964 |
aaagcttaatagcagcagctacagcattcaaagagtgaaaatatttacaatgagcttcagcaagtgcatatcttttctctacagctagtttcagctgacg |
51151865 |
T |
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| Q |
201 |
ttttctctctctacaaatagctactacttcctcttctt |
238 |
Q |
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| T |
51151864 |
ttttctctctctacaaatagctactacttcctcttctt |
51151827 |
T |
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