View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3863_low_65 (Length: 217)
Name: NF3863_low_65
Description: NF3863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3863_low_65 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 27413226 - 27413360
Alignment:
| Q |
83 |
ctacataatatatatacatgaaattaaaattgtggtgcaaaagccttaatcgtgtacgaggcagcttcctttcataagcaagtgaacaagaacaatgaca |
182 |
Q |
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| T |
27413226 |
ctacataatatatatacatgaaattaaaattgtggtgcaaaagccttaatcgtgtatgaggcagcttcctttcataagcaagtgaacaagaacaatgaca |
27413325 |
T |
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| Q |
183 |
gtaacaaggtcaattattctgctaatataacgggc |
217 |
Q |
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| T |
27413326 |
gtaacaaggtcaattattctgctaatataacgggc |
27413360 |
T |
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