View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3864_high_3 (Length: 546)

Name: NF3864_high_3
Description: NF3864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3864_high_3
NF3864_high_3
[»] chr1 (54 HSPs)
chr1 (150-348)||(52439206-52439404)
chr1 (157-348)||(49618428-49618619)
chr1 (157-348)||(49619746-49619938)
chr1 (161-329)||(40778388-40778556)
chr1 (239-348)||(38451549-38451658)
chr1 (180-348)||(38451659-38451827)
chr1 (157-348)||(40779571-40779762)
chr1 (218-348)||(52437905-52438035)
chr1 (269-348)||(25787204-25787283)
chr1 (270-348)||(25785965-25786043)
chr1 (269-340)||(48467266-48467337)
chr1 (270-348)||(13929292-13929370)
chr1 (270-348)||(47411489-47411567)
chr1 (20-72)||(40779422-40779474)
chr1 (20-72)||(49619601-49619653)
chr1 (270-345)||(13930716-13930791)
chr1 (289-348)||(16218538-16218597)
chr1 (273-348)||(47560136-47560211)
chr1 (270-348)||(14071244-14071322)
chr1 (270-332)||(21246516-21246578)
chr1 (270-332)||(43808562-43808624)
chr1 (264-332)||(34531676-34531744)
chr1 (289-345)||(34653435-34653491)
chr1 (20-72)||(40778659-40778711)
chr1 (289-348)||(44977218-44977277)
chr1 (270-332)||(2236826-2236888)
chr1 (270-332)||(9822665-9822726)
chr1 (270-332)||(30743100-30743162)
chr1 (270-332)||(35683068-35683130)
chr1 (270-336)||(48934250-48934316)
chr1 (270-332)||(48935151-48935213)
chr1 (269-347)||(49139799-49139877)
chr1 (270-331)||(13641271-13641332)
chr1 (271-348)||(47136729-47136806)
chr1 (293-346)||(48467595-48467648)
chr1 (289-348)||(21276991-21277050)
chr1 (293-348)||(33793776-33793831)
chr1 (289-348)||(44979432-44979491)
chr1 (269-348)||(47410981-47411060)
chr1 (289-348)||(52181365-52181424)
chr1 (289-348)||(52741485-52741544)
chr1 (289-348)||(52743036-52743095)
chr1 (270-332)||(2238019-2238081)
chr1 (270-332)||(9119815-9119877)
chr1 (270-332)||(10579653-10579715)
chr1 (270-332)||(26056188-26056250)
chr1 (270-348)||(37624611-37624689)
chr1 (274-336)||(40135382-40135444)
chr1 (29-79)||(40187891-40187941)
chr1 (150-208)||(45042746-45042804)
chr1 (270-332)||(50679862-50679924)
chr1 (291-332)||(38458099-38458140)
chr1 (272-332)||(9123442-9123502)
chr1 (271-347)||(9633773-9633849)
[»] chr4 (83 HSPs)
chr4 (157-348)||(54372743-54372934)
chr4 (157-348)||(54373880-54374071)
chr4 (157-337)||(49923693-49923873)
chr4 (220-348)||(37642532-37642660)
chr4 (157-327)||(49922525-49922695)
chr4 (157-322)||(5546940-5547101)
chr4 (289-348)||(11115040-11115099)
chr4 (270-348)||(27408760-27408838)
chr4 (270-348)||(37558995-37559073)
chr4 (270-348)||(37560340-37560418)
chr4 (270-348)||(43894102-43894180)
chr4 (291-348)||(49923858-49923915)
chr4 (221-348)||(21570415-21570542)
chr4 (289-348)||(6616271-6616330)
chr4 (270-348)||(33377405-33377483)
chr4 (150-295)||(20945398-20945543)
chr4 (20-72)||(54373785-54373837)
chr4 (273-332)||(5417317-5417376)
chr4 (280-331)||(5548674-5548725)
chr4 (261-304)||(21569291-21569334)
chr4 (289-348)||(29686253-29686312)
chr4 (289-348)||(39590938-39590997)
chr4 (289-348)||(47668657-47668716)
chr4 (270-348)||(86800-86878)
chr4 (270-332)||(11482809-11482871)
chr4 (270-348)||(55953893-55953971)
chr4 (270-347)||(1273474-1273550)
chr4 (267-332)||(43709912-43709977)
chr4 (271-332)||(52658924-52658985)
chr4 (268-348)||(30682717-30682797)
chr4 (20-72)||(49923543-49923595)
chr4 (270-332)||(306590-306652)
chr4 (269-348)||(11113739-11113818)
chr4 (150-205)||(20944416-20944471)
chr4 (269-348)||(21104350-21104429)
chr4 (289-348)||(35789650-35789709)
chr4 (289-348)||(39592349-39592408)
chr4 (270-332)||(46794853-46794915)
chr4 (270-332)||(2310823-2310885)
chr4 (270-332)||(12396915-12396977)
chr4 (270-348)||(15786949-15787027)
chr4 (270-332)||(23752029-23752091)
chr4 (274-332)||(26045145-26045203)
chr4 (270-332)||(26376342-26376404)
chr4 (270-332)||(29833385-29833447)
chr4 (265-339)||(32617227-32617301)
chr4 (270-348)||(46796067-46796145)
chr4 (270-332)||(47573685-47573747)
chr4 (261-346)||(42713462-42713547)
chr4 (20-72)||(5547181-5547233)
chr4 (221-304)||(31204595-31204678)
chr4 (261-337)||(31205741-31205817)
chr4 (270-326)||(35787815-35787871)
chr4 (20-72)||(37642315-37642367)
chr4 (289-332)||(96741-96784)
chr4 (289-348)||(10403277-10403335)
chr4 (269-348)||(31711089-31711168)
chr4 (265-336)||(36611056-36611127)
chr4 (277-348)||(38371853-38371924)
chr4 (289-332)||(38555336-38555379)
chr4 (289-348)||(44128394-44128453)
chr4 (151-201)||(5548577-5548627)
chr4 (270-348)||(15787543-15787621)
chr4 (270-340)||(28103527-28103597)
chr4 (285-347)||(28589782-28589844)
chr4 (294-348)||(29688039-29688093)
chr4 (270-348)||(33376215-33376293)
chr4 (269-347)||(38553927-38554005)
chr4 (230-291)||(44217627-44217688)
chr4 (270-348)||(44305020-44305098)
chr4 (270-332)||(50498013-50498075)
chr4 (270-339)||(32617575-32617644)
chr4 (267-332)||(47242965-47243030)
chr4 (270-331)||(47244031-47244092)
chr4 (270-331)||(47572600-47572661)
chr4 (270-331)||(48413592-48413653)
chr4 (271-319)||(5688679-5688727)
chr4 (264-332)||(15445449-15445517)
chr4 (289-337)||(40143662-40143710)
chr4 (20-72)||(49922794-49922846)
chr4 (264-331)||(52880827-52880895)
chr4 (289-329)||(52981210-52981250)
chr4 (270-330)||(53400200-53400260)
[»] chr5 (56 HSPs)
chr5 (144-347)||(14357796-14358000)
chr5 (157-348)||(30916046-30916237)
chr5 (159-347)||(33362497-33362685)
chr5 (220-329)||(14356448-14356557)
chr5 (233-348)||(30912311-30912426)
chr5 (270-348)||(12936143-12936221)
chr5 (233-304)||(9038502-9038573)
chr5 (269-348)||(19523980-19524059)
chr5 (289-348)||(19525348-19525407)
chr5 (270-348)||(12950301-12950379)
chr5 (271-332)||(39134680-39134741)
chr5 (264-348)||(19825871-19825955)
chr5 (148-348)||(42962020-42962220)
chr5 (289-348)||(12933748-12933807)
chr5 (269-348)||(27894063-27894142)
chr5 (289-348)||(41905172-41905231)
chr5 (261-312)||(42963247-42963298)
chr5 (269-347)||(224630-224708)
chr5 (270-348)||(8762441-8762519)
chr5 (270-332)||(11907202-11907264)
chr5 (270-348)||(18677973-18678051)
chr5 (270-348)||(19827181-19827259)
chr5 (20-72)||(14357660-14357712)
chr5 (289-348)||(328214-328273)
chr5 (289-348)||(6629728-6629787)
chr5 (289-348)||(12947909-12947968)
chr5 (270-348)||(1273086-1273164)
chr5 (270-332)||(4568015-4568077)
chr5 (270-348)||(5382939-5383017)
chr5 (274-332)||(23679160-23679218)
chr5 (274-332)||(23855594-23855652)
chr5 (286-348)||(40059385-40059447)
chr5 (270-331)||(20991690-20991751)
chr5 (20-72)||(30915765-30915817)
chr5 (289-347)||(223223-223282)
chr5 (270-332)||(19050762-19050824)
chr5 (265-332)||(20841827-20841894)
chr5 (289-348)||(26403304-26403363)
chr5 (21-72)||(33362363-33362414)
chr5 (265-332)||(36442238-36442305)
chr5 (270-332)||(1155982-1156044)
chr5 (270-348)||(5384387-5384465)
chr5 (270-332)||(10570361-10570423)
chr5 (270-332)||(15509208-15509270)
chr5 (270-332)||(15510304-15510366)
chr5 (270-332)||(21387650-21387712)
chr5 (270-332)||(24070418-24070480)
chr5 (270-348)||(39135689-39135767)
chr5 (270-332)||(42382151-42382213)
chr5 (270-327)||(22650669-22650726)
chr5 (270-331)||(24071484-24071545)
chr5 (270-325)||(641921-641976)
chr5 (272-348)||(1273383-1273459)
chr5 (316-348)||(1663184-1663216)
chr5 (264-332)||(20988703-20988771)
chr5 (20-72)||(30915896-30915948)
[»] chr7 (74 HSPs)
chr7 (161-348)||(4973981-4974168)
chr7 (154-348)||(22794247-22794440)
chr7 (156-348)||(4973510-4973702)
chr7 (144-332)||(29657002-29657192)
chr7 (154-340)||(32894721-32894908)
chr7 (157-331)||(32893470-32893645)
chr7 (220-348)||(29658604-29658732)
chr7 (270-348)||(22061836-22061914)
chr7 (270-348)||(43006382-43006460)
chr7 (270-348)||(43930316-43930394)
chr7 (270-348)||(4858385-4858463)
chr7 (270-348)||(25153655-25153733)
chr7 (270-348)||(40926560-40926638)
chr7 (270-348)||(22744743-22744821)
chr7 (270-326)||(7146799-7146855)
chr7 (261-305)||(23153662-23153706)
chr7 (221-312)||(47535692-47535783)
chr7 (261-348)||(16955689-16955776)
chr7 (270-336)||(17287083-17287149)
chr7 (261-348)||(43704484-43704571)
chr7 (270-332)||(7148099-7148161)
chr7 (270-348)||(19279653-19279731)
chr7 (270-348)||(33459584-33459662)
chr7 (270-332)||(41126252-41126314)
chr7 (294-348)||(44114720-44114774)
chr7 (270-332)||(47537081-47537143)
chr7 (270-346)||(4857200-4857276)
chr7 (20-72)||(4973829-4973881)
chr7 (289-348)||(18802449-18802508)
chr7 (261-348)||(36584937-36585024)
chr7 (149-200)||(46203574-46203625)
chr7 (289-347)||(25154996-25155054)
chr7 (150-208)||(29409159-29409217)
chr7 (270-332)||(30224017-30224079)
chr7 (267-305)||(33070645-33070683)
chr7 (298-348)||(35128231-35128281)
chr7 (270-332)||(36673877-36673939)
chr7 (270-332)||(40881104-40881166)
chr7 (270-332)||(41616637-41616699)
chr7 (270-348)||(43931907-43931985)
chr7 (271-329)||(45721808-45721866)
chr7 (270-331)||(14206687-14206748)
chr7 (270-331)||(14215377-14215438)
chr7 (271-348)||(22060460-22060537)
chr7 (270-347)||(22746361-22746438)
chr7 (270-339)||(23350926-23350995)
chr7 (20-72)||(22794117-22794169)
chr7 (20-72)||(29657278-29657330)
chr7 (20-72)||(32893717-32893769)
chr7 (148-348)||(47536769-47536969)
chr7 (289-340)||(14109129-14109180)
chr7 (289-340)||(14419086-14419137)
chr7 (289-332)||(34558361-34558404)
chr7 (261-328)||(38002546-38002613)
chr7 (264-331)||(41127206-41127273)
chr7 (261-304)||(46196897-46196940)
chr7 (261-300)||(46203686-46203725)
chr7 (289-348)||(46674994-46675053)
chr7 (274-332)||(2904092-2904150)
chr7 (270-332)||(17288261-17288323)
chr7 (270-332)||(19069930-19069992)
chr7 (270-348)||(19278350-19278428)
chr7 (270-332)||(21171527-21171589)
chr7 (270-332)||(29344177-29344239)
chr7 (270-332)||(38001517-38001579)
chr7 (270-348)||(40930415-40930493)
chr7 (289-347)||(41516404-41516462)
chr7 (270-348)||(43007690-43007768)
chr7 (270-348)||(46457067-46457145)
chr7 (270-323)||(46673512-46673565)
chr7 (264-296)||(16957441-16957473)
chr7 (280-332)||(19105587-19105639)
chr7 (152-200)||(29408391-29408439)
chr7 (277-341)||(42520227-42520290)
[»] chr3 (74 HSPs)
chr3 (157-348)||(48336344-48336535)
chr3 (157-348)||(48338045-48338236)
chr3 (150-348)||(14206702-14206899)
chr3 (150-348)||(14214450-14214647)
chr3 (218-332)||(14213145-14213259)
chr3 (270-348)||(25583111-25583189)
chr3 (270-348)||(41387474-41387552)
chr3 (269-348)||(53809533-53809612)
chr3 (157-304)||(8895197-8895344)
chr3 (220-304)||(50719696-50719781)
chr3 (220-304)||(50793067-50793152)
chr3 (270-348)||(17350143-17350221)
chr3 (270-332)||(19579233-19579295)
chr3 (271-348)||(8371217-8371294)
chr3 (271-348)||(41386127-41386204)
chr3 (272-332)||(45730650-45730710)
chr3 (289-348)||(42632703-42632762)
chr3 (289-348)||(42633946-42634005)
chr3 (289-348)||(53808315-53808374)
chr3 (270-332)||(5416211-5416273)
chr3 (270-348)||(8372657-8372735)
chr3 (270-348)||(10987694-10987772)
chr3 (270-348)||(26798947-26799025)
chr3 (270-348)||(32980493-32980571)
chr3 (270-348)||(51825662-51825740)
chr3 (270-348)||(54752613-54752691)
chr3 (270-347)||(39133015-39133092)
chr3 (264-332)||(52293558-52293626)
chr3 (277-348)||(21247233-21247304)
chr3 (269-348)||(25585873-25585952)
chr3 (270-332)||(1031829-1031891)
chr3 (270-332)||(32973152-32973214)
chr3 (270-332)||(32974264-32974326)
chr3 (270-332)||(33000841-33000903)
chr3 (270-348)||(36626728-36626806)
chr3 (270-332)||(48035365-48035427)
chr3 (270-332)||(50150734-50150796)
chr3 (270-332)||(51401392-51401454)
chr3 (270-332)||(53047910-53047972)
chr3 (270-348)||(54654007-54654085)
chr3 (269-332)||(2225064-2225127)
chr3 (279-339)||(18024576-18024636)
chr3 (279-339)||(30385192-30385252)
chr3 (279-339)||(42592411-42592471)
chr3 (264-348)||(50003258-50003342)
chr3 (289-332)||(5417108-5417151)
chr3 (289-332)||(11483047-11483090)
chr3 (273-332)||(39530808-39530867)
chr3 (269-348)||(47808146-47808225)
chr3 (269-348)||(49122042-49122121)
chr3 (289-332)||(52292607-52292650)
chr3 (270-329)||(53342732-53342791)
chr3 (269-347)||(11219428-11219506)
chr3 (270-332)||(12062425-12062487)
chr3 (290-348)||(17345308-17345366)
chr3 (270-332)||(19579335-19579397)
chr3 (289-347)||(19622003-19622061)
chr3 (30-72)||(36627198-36627240)
chr3 (270-332)||(39287483-39287545)
chr3 (270-328)||(39288480-39288538)
chr3 (270-340)||(43101899-43101969)
chr3 (270-332)||(48867471-48867533)
chr3 (270-332)||(53049078-53049140)
chr3 (29-79)||(54353312-54353362)
chr3 (289-331)||(55442608-55442650)
chr3 (270-332)||(55443591-55443653)
chr3 (270-339)||(17934060-17934129)
chr3 (273-326)||(19253046-19253099)
chr3 (273-330)||(32999812-32999869)
chr3 (157-206)||(50002552-50002601)
chr3 (270-331)||(52705349-52705410)
chr3 (221-332)||(2088855-2088965)
chr3 (264-332)||(7583483-7583551)
chr3 (267-331)||(53901583-53901647)
[»] chr8 (55 HSPs)
chr8 (157-348)||(11080960-11081151)
chr8 (221-328)||(42307513-42307620)
chr8 (222-347)||(42314809-42314934)
chr8 (270-348)||(31623903-31623981)
chr8 (270-333)||(16346111-16346174)
chr8 (270-348)||(36756061-36756139)
chr8 (269-339)||(37324728-37324798)
chr8 (270-348)||(38591048-38591126)
chr8 (270-348)||(41867957-41868035)
chr8 (270-348)||(43386743-43386821)
chr8 (271-348)||(36940075-36940152)
chr8 (272-348)||(38790296-38790372)
chr8 (270-336)||(39244-39310)
chr8 (289-348)||(10053804-10053863)
chr8 (273-348)||(37323345-37323420)
chr8 (270-332)||(12818767-12818829)
chr8 (270-348)||(43277962-43278040)
chr8 (20-72)||(42307763-42307815)
chr8 (273-348)||(117045-117120)
chr8 (269-332)||(162640-162703)
chr8 (273-332)||(22914234-22914293)
chr8 (289-348)||(36070175-36070234)
chr8 (289-348)||(36071438-36071497)
chr8 (289-348)||(38589818-38589876)
chr8 (289-348)||(43275747-43275806)
chr8 (230-348)||(43414378-43414496)
chr8 (261-348)||(43416000-43416087)
chr8 (270-332)||(9189407-9189469)
chr8 (270-332)||(24068343-24068405)
chr8 (270-348)||(29739684-29739762)
chr8 (150-208)||(35462910-35462968)
chr8 (270-348)||(37472400-37472478)
chr8 (270-348)||(37474077-37474155)
chr8 (270-347)||(19913490-19913567)
chr8 (20-72)||(11080808-11080860)
chr8 (269-348)||(37982-38061)
chr8 (270-333)||(4534046-4534109)
chr8 (270-329)||(9190483-9190542)
chr8 (289-348)||(16363872-16363931)
chr8 (20-55)||(16497115-16497150)
chr8 (270-329)||(31625425-31625484)
chr8 (270-345)||(39325875-39325950)
chr8 (289-348)||(39544927-39544986)
chr8 (270-332)||(12820139-12820201)
chr8 (270-332)||(21524635-21524697)
chr8 (270-348)||(35945478-35945556)
chr8 (270-348)||(39546718-39546796)
chr8 (270-348)||(41866891-41866969)
chr8 (291-348)||(3237702-3237759)
chr8 (270-331)||(6843769-6843830)
chr8 (270-339)||(10398676-10398745)
chr8 (289-346)||(14820192-14820249)
chr8 (264-304)||(20066118-20066158)
chr8 (269-305)||(36757270-36757306)
chr8 (264-348)||(39323784-39323868)
[»] chr6 (43 HSPs)
chr6 (221-348)||(683532-683659)
chr6 (157-347)||(682263-682453)
chr6 (357-405)||(9665466-9665514)
chr6 (270-348)||(31738360-31738438)
chr6 (268-348)||(8411083-8411163)
chr6 (270-332)||(1757535-1757597)
chr6 (270-348)||(5311276-5311354)
chr6 (289-348)||(33802077-33802136)
chr6 (270-348)||(8412357-8412435)
chr6 (270-336)||(8447230-8447296)
chr6 (270-336)||(8456034-8456100)
chr6 (487-528)||(9665829-9665870)
chr6 (272-348)||(27108217-27108293)
chr6 (272-348)||(27150014-27150090)
chr6 (289-348)||(18139547-18139606)
chr6 (267-333)||(1692086-1692152)
chr6 (270-327)||(1693022-1693079)
chr6 (270-331)||(11724337-11724398)
chr6 (270-331)||(22299944-22300005)
chr6 (20-72)||(682543-682595)
chr6 (279-339)||(9899571-9899631)
chr6 (264-332)||(13173050-13173118)
chr6 (264-332)||(19368553-19368621)
chr6 (221-304)||(25439099-25439182)
chr6 (279-339)||(30860319-30860379)
chr6 (264-347)||(13176368-13176451)
chr6 (261-312)||(13562328-13562379)
chr6 (261-304)||(18230363-18230406)
chr6 (261-348)||(24318096-24318183)
chr6 (270-332)||(9927619-9927681)
chr6 (273-327)||(14174121-14174175)
chr6 (273-327)||(14178657-14178711)
chr6 (22-72)||(18498261-18498311)
chr6 (270-332)||(19048262-19048324)
chr6 (270-332)||(19367730-19367792)
chr6 (261-295)||(24317099-24317133)
chr6 (270-332)||(28225437-28225499)
chr6 (270-332)||(31740313-31740375)
chr6 (270-331)||(18773668-18773729)
chr6 (271-332)||(26584079-26584140)
chr6 (270-339)||(30859931-30860000)
chr6 (264-304)||(10673650-10673690)
chr6 (267-295)||(25437833-25437861)
[»] chr2 (38 HSPs)
chr2 (145-311)||(20921544-20921711)
chr2 (157-329)||(12364206-12364378)
chr2 (157-279)||(12365946-12366066)
chr2 (270-348)||(20921478-20921556)
chr2 (270-348)||(42596557-42596635)
chr2 (270-348)||(37867753-37867831)
chr2 (270-331)||(33553406-33553467)
chr2 (264-332)||(3255913-3255981)
chr2 (264-332)||(4630119-4630187)
chr2 (289-340)||(23178942-23178993)
chr2 (289-340)||(23590199-23590250)
chr2 (269-348)||(35799509-35799588)
chr2 (221-327)||(1257507-1257613)
chr2 (270-332)||(3665237-3665299)
chr2 (274-348)||(11575500-11575574)
chr2 (270-348)||(41795993-41796071)
chr2 (221-312)||(371959-372050)
chr2 (148-202)||(370910-370964)
chr2 (270-348)||(7038373-7038451)
chr2 (264-329)||(33836785-33836850)
chr2 (270-339)||(39110083-39110152)
chr2 (270-345)||(2581803-2581878)
chr2 (270-337)||(3666309-3666376)
chr2 (289-348)||(32614382-32614441)
chr2 (289-332)||(33837815-33837858)
chr2 (285-348)||(35061271-35061334)
chr2 (270-348)||(7036963-7037041)
chr2 (289-347)||(10368445-10368503)
chr2 (273-327)||(11386642-11386696)
chr2 (270-332)||(12854145-12854207)
chr2 (270-332)||(20630712-20630774)
chr2 (270-332)||(29424653-29424715)
chr2 (270-328)||(39272251-39272309)
chr2 (270-348)||(42027190-42027268)
chr2 (271-332)||(6706939-6707000)
chr2 (299-348)||(28109939-28109988)
chr2 (291-332)||(30202945-30202986)
chr2 (279-339)||(36099304-36099364)
[»] scaffold0034 (3 HSPs)
scaffold0034 (182-332)||(98634-98784)
scaffold0034 (220-348)||(98046-98174)
scaffold0034 (20-80)||(98318-98379)
[»] scaffold0065 (3 HSPs)
scaffold0065 (150-348)||(35360-35557)
scaffold0065 (218-328)||(36735-36845)
scaffold0065 (161-202)||(36644-36685)
[»] scaffold0041 (3 HSPs)
scaffold0041 (221-304)||(608-691)
scaffold0041 (220-312)||(1115-1207)
scaffold0041 (270-332)||(85117-85179)
[»] scaffold0045 (1 HSPs)
scaffold0045 (270-345)||(77222-77297)
[»] scaffold0046 (2 HSPs)
scaffold0046 (270-348)||(23403-23481)
scaffold0046 (270-348)||(24856-24934)
[»] scaffold0024 (1 HSPs)
scaffold0024 (292-348)||(73049-73105)
[»] scaffold0013 (2 HSPs)
scaffold0013 (289-348)||(96157-96216)
scaffold0013 (270-348)||(96856-96934)
[»] scaffold0009 (1 HSPs)
scaffold0009 (270-332)||(205593-205655)
[»] scaffold1337 (1 HSPs)
scaffold1337 (150-295)||(282-428)
[»] scaffold1974 (1 HSPs)
scaffold1974 (289-348)||(688-747)
[»] scaffold1878 (1 HSPs)
scaffold1878 (289-348)||(527-586)
[»] scaffold0290 (2 HSPs)
scaffold0290 (289-348)||(9538-9597)
scaffold0290 (289-340)||(8384-8435)
[»] scaffold0178 (1 HSPs)
scaffold0178 (270-332)||(2306-2368)
[»] scaffold0025 (1 HSPs)
scaffold0025 (270-348)||(56741-56819)
[»] scaffold2127 (1 HSPs)
scaffold2127 (271-348)||(557-634)
[»] scaffold0084 (2 HSPs)
scaffold0084 (274-331)||(13249-13306)
scaffold0084 (270-346)||(11705-11781)
[»] scaffold0177 (1 HSPs)
scaffold0177 (270-332)||(1768-1830)
[»] scaffold0171 (1 HSPs)
scaffold0171 (22-72)||(29032-29082)
[»] scaffold0038 (1 HSPs)
scaffold0038 (270-332)||(25935-25997)
[»] scaffold0136 (1 HSPs)
scaffold0136 (150-207)||(23869-23926)


Alignment Details
Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 150 - 348
Target Start/End: Original strand, 52439206 - 52439404
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattga 249  Q
    |||||| ||||||||||||| |||||||| |||||||  ||||||||||||||||||||       | ||||||||||| ||||||| | ||||||||||    
T  52439206 aattaggtgttggtgatacacagttagatctgatagacttcatttatccaacgatctcctttttatgggtgttaaaatgaataaaatagaaccaaattga 52439305  T
Q  250 atgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  52439306 atgatggaaagaagataaaggatcaatttgaaacgtttaatagttagaggaccaaattgaaaacagaaaataagttaagggaccaaatgatgtattaag 52439404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 49618619 - 49618428
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||  |||||||| ||||||| ||||||||||||||| |||||       | | ||||||||| |||||||  ||||||||||||||||||    
T  49618619 tgttggtgatactcagttagatctgatagacctcatttatccaacggtctcctttttttgggggttaaaatgaataaaatatgaccaaattgaatgatgg 49618520  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||| |||||||    
T  49618519 aaagaagataaaacaccaatttaaaacgtttaatagttaggggaccaaaatgaaaactgaaaataagttaagagactgaatgatttattaag 49618428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 49619746 - 49619938
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaatt-ggaccaaattgaatgatg 255  Q
    ||||||||||||| ||||| || ||||||| |||||||||| || | |||||        || ||||||||| ||||||   ||||||||||||||||||    
T  49619746 tgttggtgatacacagttaaatctgatagacctcatttatctaatggtctccttttttttagggttaaaatgaataaaaaaaggaccaaattgaatgatg 49619845  T
Q  256 gaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  49619846 gaaagaagataaaggaccaatttggaacgtttaatagttaggggaccaaattgaaaactgaaaataaattaagggaccaaatgatgtattaag 49619938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 161 - 329
Target Start/End: Complemental strand, 40778556 - 40778388
Alignment:
Q  161 ggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatggaaag 260  Q
    ||||||||| |||||||| | ||||| ||||||||||||||| |||||       ||| ||||||||  ||||||| |||||||||||||||| ||||||    
T  40778556 ggtgatacacagttagatctaatagacctcatttatccaacggtctccttttcttgagggttaaaataaataaaataggaccaaattgaatgaaggaaag 40778457  T
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagg 329  Q
    ||||||||  ||||| ||  ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  40778456 aagataaagaaccaatttagaacgtttaatagttaagggaccaaattaaaaactgaaaataagttaagg 40778388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 38451658 - 38451549
Alignment:
Q  239 gaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatg 338  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  38451658 gaccaaattgaatgatggaaagaagataaagtaccaatttggaacgtttaatagttaggggaccaaattgaaaacataaaataagttaagggaccaaatg 38451559  T
Q  339 atctattaag 348  Q
    || |||||||    
T  38451558 atgtattaag 38451549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 348
Target Start/End: Original strand, 38451659 - 38451827
Alignment:
Q  180 tgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattg 279  Q
    |||||||  ||||||||||||||||||||       |  |||||||||| |||||||  ||||||||||||||||| ||||||||| || |||||| ||     
T  38451659 tgatagacttcatttatccaacgatctccttttttaggatgttaaaatgaataaaatatgaccaaattgaatgatgaaaagaagatgaaggaccaattta 38451758  T
Q  280 aaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
     |||||||||||||||||  ||||||||||||||  ||||||||||||  ||| ||||||| |||||||    
T  38451759 gaacgtttaatagttaggataccaaattgaaaacaaaaaataagttaaatgaccaaatgatgtattaag 38451827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 40779571 - 40779762
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| |  | ||| ||||||| |||| |||||||||| |||||       | | ||||||||| ||||||| ||||||| |||||| |||     
T  40779571 tgttggtgatacacaaattgatatgatagacctcacttatccaacggtctcctttttttgggggttaaaatgaataaaataggaccaacttgaataatga 40779670  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||| |||||||| |||||| || |||||||||||| ||||  ||| |||||||||||||||||||| ||||||||| ||| ||| |||||||    
T  40779671 aaataagataaatgaccaatttaaaacgtttaataattagatgactaaattgaaaactgaaaataaattaagggaccaaacgatgtattaag 40779762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 218 - 348
Target Start/End: Complemental strand, 52438035 - 52437905
Alignment:
Q  218 gtgttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaa 317  Q
    ||||||||||  ||||||| |||||||||| ||||||| |||||||||||| |||||| || |||| ||||||||||| | ||||||||||||||| |||    
T  52438035 gtgttaaaataaataaaataggaccaaattaaatgatgtaaagaagataaatgaccaatttaaaacatttaatagttaagagaccaaattgaaaacagaa 52437936  T
Q  318 aataagttaagggactaaatgatctattaag 348  Q
    ||||||||||  ||| | ||||| |||||||    
T  52437935 aataagttaaaagaccatatgatgtattaag 52437905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 25787204 - 25787283
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  25787204 agaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 25787283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 25786043 - 25785965
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  25786043 gaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 25785965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 269 - 340
Target Start/End: Complemental strand, 48467337 - 48467266
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    |||||||||||||||  || |||||||||| ||||||||||||||  ||||||||||||||||| |||||||    
T  48467337 agaccaaattgaaacactttatagttagggaaccaaattgaaaacaaaaaataagttaagggaccaaatgat 48467266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 13929370 - 13929292
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||| |||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  13929370 gaccaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 13929292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 47411489 - 47411567
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||| ||||||| |||||| |||||||||||||||||| ||||||| |||||||    
T  47411489 gaccaaattgagacactttatagttagggaaccaaatggaaaaccgaaaataagttaagggaccaaatgatgtattaag 47411567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 40779422 - 40779474
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  40779422 aaatttaaatgtttgattttgtggtttttgttgaagttgaaatgatgaatttt 40779474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 49619601 - 49619653
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  49619601 aaatttaaatgtttgattttgtggtttttgttgaagttgaaatgatgaatttt 49619653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 13930716 - 13930791
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatt 345  Q
    ||||||||||| ||  || |||||||| ||||||||||||||||  ||||||||||||||||| ||||||| ||||    
T  13930716 gaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtatt 13930791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 16218538 - 16218597
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| || || ||||||| ||||||| |||||||||||||||||||||||||    
T  16218538 atagttaggggatcagatagaaaactaaaaataaattaagggactaaatgatctattaag 16218597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 47560211 - 47560136
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||  || ||||||||||||||||| ||||||  ||||||||| |||||||| ||||||| |||||||    
T  47560211 caaattgaaacactttatagttaggggaccaaagtgaaaatcgaaaataaggtaagggaccaaatgatgtattaag 47560136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 14071244 - 14071322
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||| ||||||||||||||||  ||||||| ||||||||| ||||||| |||||||    
T  14071244 gaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataaattaagggaccaaatgatgtattaag 14071322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 21246516 - 21246578
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| ||||||||||||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  21246516 gaccgaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggac 21246578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 43808562 - 43808624
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||||| ||||||| | ||| || | |||||||||||||||||    
T  43808562 gaccaaattgaaacgtttaatagttaagggaccacactgagaaattaaaataagttaagggac 43808624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 34531744 - 34531676
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||||||| || ||| |||||||| |||||||| ||||| | ||||||||||||||||||    
T  34531744 ataagagaccaaattgagacattttatagttagaggaccaaaatgaaatccgaaaataagttaagggac 34531676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 34653491 - 34653435
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatt 345  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||| ||||||| ||||    
T  34653491 atagttaagggaccaaagtgaaaaccgaaaataagttaagggaccaaatgatgtatt 34653435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 40778711 - 40778659
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||    
T  40778711 aaatttaaatgtttgattttgtggtttttgctgaagttgaaatgatgaatttt 40778659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 44977277 - 44977218
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| |||||||  ||||||||||||||||| |||| || |||||||    
T  44977277 atagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaataatgtattaag 44977218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 2236888 - 2236826
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  2236888 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 2236826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 9822726 - 9822665
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||||| | ||||||| ||| || || ||||||||||||||||    
T  9822726 gaccaaattgaaacgtttaatagttaagtgaccaaactgacaattg-aaataagttaagggac 9822665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 30743162 - 30743100
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| ||||||||||| ||||||| ||||| || | |||||||||||| ||||    
T  30743162 gaccaaattgaaacatttaatagttaagggaccacattgagaaattaaaataagttaaaggac 30743100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 35683130 - 35683068
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  35683130 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 35683068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 48934316 - 48934250
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaa 336  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||| ||||    
T  48934316 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggattaaa 48934250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 48935151 - 48935213
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  48935151 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 48935213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 49139877 - 49139799
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    |||||||||||| ||  || ||||||| |||||||||  ||||||  ||||||||||||||||| ||||||| ||||||    
T  49139877 agaccaaattgagacactttatagttatgggaccaaaacgaaaaccaaaaataagttaagggaccaaatgatgtattaa 49139799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 13641332 - 13641271
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  ||||||||||||||||    
T  13641332 gaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaaggga 13641271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 47136729 - 47136806
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||| ||  || |||||||||||||| ||||||||||  |||||||||||| |||  ||||||| |||||||    
T  47136729 accaaattgagacactttatagttaggggacctaattgaaaaccaaaaataagttaatggatcaaatgatgtattaag 47136806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 48467595 - 48467648
Alignment:
Q  293 ttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatta 346  Q
    ||||||||||||||||||||  |||||||||||||||||| ||| ||| |||||    
T  48467595 ttaggggaccaaattgaaaatagaaaataagttaagggaccaaacgatgtatta 48467648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 21277050 - 21276991
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||  ||||||||||||||  ||||||||||||||||| |||| || |||||||    
T  21277050 atagttaggcaaccaaattgaaaaccaaaaataagttaagggaccaaataatgtattaag 21276991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 348
Target Start/End: Complemental strand, 33793831 - 33793776
Alignment:
Q  293 ttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||| |||||||  ||||||||||||||||  ||||||| |||||||    
T  33793831 ttaggggaccaaagtgaaaaccaaaaataagttaagggatcaaatgatgtattaag 33793776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 44979491 - 44979432
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| | ||||||| |||||||  |||||||||||||||| |||||||| |||||||    
T  44979491 atagttaagagaccaaagtgaaaacaaaaaataagttaagggattaaatgatgtattaag 44979432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 47411060 - 47410981
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || |||||||||||| |||||||||||   ||||||| ||||||||| |||| || |||||||    
T  47411060 agaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataatttaagggaccaaattatgtattaag 47410981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 52181365 - 52181424
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| |||||||||||||||   |||||||||||| |||| |||| ||||||||||    
T  52181365 atagttagaggaccaaattgaaaataaaaaataagttaaaggaccaaattatctattaag 52181424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 52741544 - 52741485
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| |||||||| | |||||  ||||||||||||||||| ||||||| |||||||    
T  52741544 atagttagaggaccaaaataaaaacgaaaaataagttaagggaccaaatgatatattaag 52741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 52743036 - 52743095
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| ||||||   |||||||| |||||||| ||||||| |||||||    
T  52743036 atagttaggggaccaaagtgaaaatgaaaaataagctaagggaccaaatgatgtattaag 52743095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 2238019 - 2238081
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||| ||||||||| ||||| | ||||||||||||||||||    
T  2238019 gaccaaattgagacactttatagttatgggaccaaaatgaaatccgaaaataagttaagggac 2238081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 9119877 - 9119815
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || |||||||| |||||||||| ||| | ||||||||||||||||||    
T  9119877 gaccaaattgagacactttatagttagaggaccaaattaaaatccgaaaataagttaagggac 9119815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 10579653 - 10579715
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||  ||||| ||||||||||| |||||||||| |||| |  |||||||||||||||||    
T  10579653 gaccaaaacgaaacttttaatagttaagggaccaaatcgaaaccaaaaaataagttaagggac 10579715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 26056188 - 26056250
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| |  |||||||||||||||||    
T  26056188 gaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagggac 26056250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 37624611 - 37624689
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||  |||||| |||||||  |||||||    || ||| ||||||||||||||||| |||||||    
T  37624611 gaccaaattgaaacgttttttagttaagggaccattttgaaaaaaataattaaattaagggactaaatgatgtattaag 37624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 40135382 - 40135444
Alignment:
Q  274 aaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaa 336  Q
    ||||||| || ||| | |||||| |||||||| ||||| || |||||||||||||||||||||    
T  40135382 aaattgagacattttaaagttagaggaccaaaatgaaatctaaaaataagttaagggactaaa 40135444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 40187941 - 40187891
Alignment:
Q  29 tgtttgattttgtgctttttgttgaagttgaaaagataaattttgaaagaa 79  Q
    ||||| ||| |||| |||||||||||||||||| ||||| |||||||||||    
T  40187941 tgtttaattatgtggtttttgttgaagttgaaatgataatttttgaaagaa 40187891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 45042804 - 45042746
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctcc 208  Q
    |||||||||||| |||||||  ||||||| ||||| | ||||||||||||||| |||||    
T  45042804 aattagatgttgatgatacacggttagatctgatatacctcatttatccaacggtctcc 45042746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 50679862 - 50679924
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||| ||||||||| | |||||| |||||||||||||||||    
T  50679862 gaccaaattgagacactttatagttaagggaccaaaataaaaactaaaaataagttaagggac 50679924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 38458140 - 38458099
Alignment:
Q  291 agttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  38458140 agttaggggaccaaattgaaatccaaaaataagttaagggac 38458099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 9123442 - 9123502
Alignment:
Q  272 ccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||  || ||||||| ||||||||| | ||| | ||||||||||||||||||    
T  9123442 ccaaattgaaacactttatagttaagggaccaaaataaaatccgaaaataagttaagggac 9123502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 9633849 - 9633773
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    |||||||||| ||  || ||||||| ||||||||| |||||||  |||||||||||| |||| |||| || ||||||    
T  9633849 accaaattgagacactttatagttaagggaccaaaatgaaaaccaaaaataagttaaaggaccaaattatgtattaa 9633773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 2e-53; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 54372934 - 54372743
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| |||||||| | ||||| ||||||||||||||| |||||       | | ||||||||| ||||||| |||||||||||||||||||    
T  54372934 tgttggtgatacacagttagatctaatagacctcatttatccaacggtctccttttcttgggggttaaaatgaataaaataggaccaaattgaatgatgg 54372835  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  54372834 aaagaagataaaggaccaatttggaacgtttaatagttagaggaccaaattgaaaacggaaaataagttaagggaccaaatgatgtattaag 54372743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 54373880 - 54374071
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| |||||||| | ||||| ||||||||||||  | |||||       | | ||||||||| ||||||| |||||||||||||||||||    
T  54373880 tgttggtgatacacagttagatcttatagacctcatttatccagtggtctccttttcttgggggttaaaatgaataaaataggaccaaattgaatgatgg 54373979  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  54373980 aaagaagataaaggaccaatttagaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggatcaaatgatgtattaag 54374071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 157 - 337
Target Start/End: Original strand, 49923693 - 49923873
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| |||||||| ||||||| ||||| ||||||||| |||||       ||| ||||||||  ||||||| || |||||||||||||||     
T  49923693 tgttggtgatacacagttagatctgatagacctcatctatccaacggtctccttttcttgagggttaaaataaataaaatagggccaaattgaatgatga 49923792  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaat 337  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  49923793 aaagaagataaaggaccaatttgaaacgtttaatagttaagggaccaaattaaaaactgaaaataagttaagggaccaaat 49923873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 220 - 348
Target Start/End: Original strand, 37642532 - 37642660
Alignment:
Q  220 gttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaa 319  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||| ||||||||||| |||||    
T  37642532 gttaaaatgaatgaaataggaccaaattgaatgatggaaagaagataaaggactattttgaaacgtttaatagttaggggactaaattgaaaacagaaaa 37642631  T
Q  320 taagttaagggactaaatgatctattaag 348  Q
    ||||||||||||| |||| || |||||||    
T  37642632 taagttaagggaccaaataatgtattaag 37642660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 157 - 327
Target Start/End: Complemental strand, 49922695 - 49922525
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    |||||||| |||| |||||||| ||||||| ||||| ||||||||| ||||        ||| ||||||||| ||||||| ||  ||||||||||||  |    
T  49922695 tgttggtgctacacagttagatctgatagacctcatctatccaacggtctcattttcttgagggttaaaatgaataaaatagggtcaaattgaatgacag 49922596  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaa 327  Q
    ||||||||||||||||||| |||||| |||||||| |||   ||||||||| |||||| ||||||| ||||    
T  49922595 aaagaagataaaagaccaatttgaaatgtttaataattaaaagaccaaattaaaaactaaaaataaattaa 49922525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 157 - 322
Target Start/End: Complemental strand, 5547101 - 5546940
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    |||||||||| || | |||||| |||||||  |||||||||||||| |||||       | ||||||||||| |||||||   |  ||||| |||||||     
T  5547101 tgttggtgattcacacttagatctgatagacgtcatttatccaacggtctcctttttttgggtgttaaaatgaataaaat---attaaattaaatgatga 5547005  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataa 322  Q
    |||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||  |||||||    
T  5547004 aaagaagataaaggaccaatttgatacgtttaatagttagggg-ccaaattgaaaacataaaataa 5546940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 11115040 - 11115099
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  11115040 atagttaggggaccaaaatgaaaactgaaaataagttaagggaccaaatgatgtattaag 11115099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 27408838 - 27408760
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  27408838 gaccaaattgagacactttatagttagatgaccaaattgaaaactgaaaataagttaagggaccaaatgatgtattaag 27408760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 37559073 - 37558995
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| |||||||||||||||||||||||||  |||||||||||||| || ||||||| |||||||    
T  37559073 gaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaaggaaccaaatgatgtattaag 37558995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 37560340 - 37560418
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  37560340 gaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 37560418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 43894180 - 43894102
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| ||||||||||||||||| |||||||  ||||||||||||||||||| ||||| |||||||    
T  43894180 gaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggactatatgatgtattaag 43894102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 49923858 - 49923915
Alignment:
Q  291 agttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  49923858 agttaagggaccaaattgaaaactgaaaataagttaagggaccaaatgatatattaag 49923915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 348
Target Start/End: Original strand, 21570415 - 21570542
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaa-gataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaa 319  Q
    |||||||  ||||||| ||| |||||||| ||||| ||| || |||||| ||||||||||||||||||||||||||||||||||| | |||||    ||     
T  21570415 ttaaaattaataaaataggatcaaattga-tgatgaaaacaaagataaatgaccaaattgaaacgtttaatagttaggggaccaattcgaaaaaaagaat 21570513  T
Q  320 taagttaagggactaaatgatctattaag 348  Q
    ||||||||||||| ||| ||| |||||||    
T  21570514 taagttaagggaccaaacgatgtattaag 21570542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 6616271 - 6616330
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||| |||||||    
T  6616271 atagttaggggaccaaagtgaaaacggaaaataagttaagggaccaaatgatgtattaag 6616330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 33377405 - 33377483
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||||||||||   ||||||||||||||||| ||||||| |||||||    
T  33377405 gaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaag 33377483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 20945398 - 20945543
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatc-tccnnnnnnngagtgttaaaatggataaaattggaccaaattg 248  Q
    |||||| ||||||||||||| |||||||| | ||||| ||||||||||||||| || ||        ||| ||||||||  || |||| ||||||| |||    
T  20945398 aattaggtgttggtgatacacagttagatctaatagaactcatttatccaacggtcctcttttttaggag-gttaaaattaatgaaataggaccaagttg 20945496  T
Q  249 aatgatggaaagaagataaaagaccaaattgaaacgtttaatagtta 295  Q
    ||||||||||| |||| |||  |||||| ||||||||||||||||||    
T  20945497 aatgatggaaataagagaaagaaccaaaatgaaacgtttaatagtta 20945543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 54373785 - 54373837
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  54373785 aaatttaaatgtttgattttgtggtttttgttgaagttgaaatgatgaatttt 54373837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 5417376 - 5417317
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||||||||||| ||||||||| |||||| | |||||||||||||||||    
T  5417376 caaattgaaacatttaatagttaagggaccaaactgaaaaattaaaataagttaagggac 5417317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 5548674 - 5548725
Alignment:
Q  280 aaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  5548674 aaacgtttaatagttaggggattaaattgaaaacggaaaataagttaaggga 5548725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 21569334 - 21569291
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  21569334 aagataaatgaccaaattgaaacgtttaatagttaggggaccaa 21569291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 29686312 - 29686253
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  29686312 atagttaagggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaag 29686253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 39590997 - 39590938
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  39590997 atagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaag 39590938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 47668657 - 47668716
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||| ||||||| |||||||    
T  47668657 atagttaggggaccaaagtgaaaacagaaaataagttaaaggaccaaatgatgtattaag 47668716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 86878 - 86800
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| | | || |||||||||| |||||| |||||||| ||||||| ||||| ||||||||||| |||||||    
T  86878 gaccaaattgagatgctttatagttagggaaccaaagtgaaaactaaaaataaattaagagactaaatgatgtattaag 86800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 11482871 - 11482809
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| ||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  11482871 gaccaaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggac 11482809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 55953893 - 55953971
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| ||||||| ||||||||||||||||   ||||||||||||||||  ||||||| |||||||    
T  55953893 gaccaaattgagacattttatagttatgggaccaaattgaaaatcaaaaataagttaagggatcaaatgatatattaag 55953971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 1273474 - 1273550
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||||||| ||  || ||||||||||||||||||| |||||  ||||||||||||||||| ||||||| ||||||    
T  1273474 gaccaaattgagacactttatagttaggggaccaaatt-aaaaccaaaaataagttaagggaccaaatgatatattaa 1273550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 332
Target Start/End: Original strand, 43709912 - 43709977
Alignment:
Q  267 aaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||||||||||||||| ||||| | | ||| || | |||||||||||||||||    
T  43709912 aaagaccaaattgaaacgtttaatagttaagggactacactgagaaattaaaataagttaagggac 43709977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 52658985 - 52658924
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||   |||||||||||||||||    
T  52658985 accaaattgaaacattttatagttaggggaccaaagtgaaaataaaaaataagttaagggac 52658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 30682797 - 30682717
Alignment:
Q  268 aagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| | ||  || ||||||| ||||||||| |||||||| ||||||||||||||||| |||| || |||||||    
T  30682797 aagaccaaattaagacactttatagttaagggaccaaaatgaaaactaaaaataagttaagggaccaaattatgtattaag 30682717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 49923543 - 49923595
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||| ||||||    
T  49923543 aaatttaaatgtttgattttgtggtttttgttgaagtagaaatgatgaatttt 49923595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 306652 - 306590
Alignment:
Q  270 gaccaaattgaaac-gtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| |||||| ||||||||||||||||||||| |  |||||||||||||||||    
T  306652 gaccaaattgaaacagtttaa-agttaggggaccaaattgaaatccaaaaataagttaagggac 306590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 11113818 - 11113739
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || ||||||| ||||| ||| ||||||| |||||||||||||| ||| ||||||| |||||||    
T  11113818 agaccaaattgagacactttatagttaagggactaaaatgaaaaccgaaaataagttaagtgaccaaatgatgtattaag 11113739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 20944471 - 20944416
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatc 205  Q
    |||||| |||||||||||||  ||||||| | ||||||||||||||||||||||||    
T  20944471 aattaggtgttggtgatacacggttagatctaatagatctcatttatccaacgatc 20944416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 21104350 - 21104429
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || ||||||||||||||||| |||||||  ||||||| |||||| || ||||||| |||||||    
T  21104350 agaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataatttaaggaaccaaatgatatattaag 21104429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 35789650 - 35789709
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| ||||||||| |||||||  ||||||||||||| ||||||||||| |||||||    
T  35789650 atagttacgggaccaaagtgaaaaccaaaaataagttaagagactaaatgatgtattaag 35789709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 39592349 - 39592408
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||| ||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  39592349 atagttaggggactaaagtgaaaacataaaataagttaagggaccaaatgatatattaag 39592408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 46794915 - 46794853
Alignment:
Q  270 gaccaaattgaaac-gtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| |||||| ||||||||||||||||||||| |  |||||||||||||||||    
T  46794915 gaccaaattgaaacagtttaa-agttaggggaccaaattgaaatccaaaaataagttaagggac 46794853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 2310823 - 2310885
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| || ||| ||||||||||||||||| |||||   ||||||||||||||||||    
T  2310823 gaccaaattgagacattttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 2310885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 12396915 - 12396977
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  12396915 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 12396977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 15787027 - 15786949
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||| |||| |||||||  |||||||||||| |||| ||||||| |||||||    
T  15787027 gaccaaattgagacagtttatagttaggggaacaaaatgaaaacaaaaaataagttaatggaccaaatgatgtattaag 15786949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 23752091 - 23752029
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || | ||||||||||||||||||||| || |||||||||||||||||    
T  23752091 gaccaaattgagacaatttaaagttaggggaccaaattgaaatctaaaaataagttaagggac 23752029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 26045203 - 26045145
Alignment:
Q  274 aaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||| ||||||| | ||| || | |||||||||||||||||    
T  26045203 aaattgaaacgtttaatagttaagggaccacactgagaaattaaaataagttaagggac 26045145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 26376404 - 26376342
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| |||||| |||||||||||| |||| |||||||  ||||||| |||||||||    
T  26376404 gaccaaattgagacgttttatagttaggggatcaaaatgaaaaccaaaaataatttaagggac 26376342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 29833447 - 29833385
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| || ||| ||| ||||||||||||| ||||| | ||||||||||||||||||    
T  29833447 gaccaaattgagacattttataattaggggaccaaaatgaaatccgaaaataagttaagggac 29833385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 32617301 - 32617227
Alignment:
Q  265 taaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    |||| |||||||  ||||| ||||||||||| ||||||||| | ||| |  ||||||||||||||||||||||||    
T  32617301 taaaggaccaaaacgaaacttttaatagttaagggaccaaaataaaaccaaaaaataagttaagggactaaatga 32617227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 46796067 - 46796145
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| | |||||  ||||||||||||||||| ||| ||| |||||||    
T  46796067 gaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaataagttaagggaccaaacgatgtattaag 46796145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 47573685 - 47573747
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||| |||||||||||||||| ||||||| | ||| || | |||||||||||||||||    
T  47573685 gaccaaattaaaacgtttaatagttaagggaccacactgagaaattaaaataagttaagggac 47573747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 42713547 - 42713462
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatta 346  Q
    ||||||||| |||||||||||||| |||||||||| |||| ||||| |||||    || |||||||| |||| ||||||| |||||    
T  42713547 aagataaaaaaccaaattgaaacgcttaatagttaagggatcaaatcgaaaaaaagaattaagttaaaggaccaaatgatatatta 42713462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 5547233 - 5547181
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  5547233 aaatttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 5547181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 31204678 - 31204595
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaa-gataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    |||||||  ||||||| |||||||||||| ||||  ||| || |||||| |||||  ||||||||||||||||||||||||||||    
T  31204678 ttaaaattaataaaataggaccaaattga-tgattaaaataaagataaatgaccattttgaaacgtttaatagttaggggaccaa 31204595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 31205741 - 31205817
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaat 337  Q
    |||||||| |||||  |||||||||||||||||||||||||||| | |||||    || ||||||||||||| ||||    
T  31205741 aagataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggaccaaat 31205817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 35787871 - 35787815
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagtta 326  Q
    |||||||||||||| ||| |||||||| |||||||| |||||||  |||||||||||    
T  35787871 gaccaaattgaaacattttatagttagaggaccaaagtgaaaaccaaaaataagtta 35787815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 37642315 - 37642367
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  37642315 aaatttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 37642367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 96741 - 96784
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||| |||||||  |||||||||||||||||    
T  96741 atagttaggggaccaaagtgaaaacataaaataagttaagggac 96784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 10403335 - 10403277
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| | |||||  |||||||||| |||||||||||||| |||||||    
T  10403335 atagttaggggaccaaagtaaaaaccaaaaataagtt-agggactaaatgatgtattaag 10403277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 31711168 - 31711089
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || |||||||  |||||||| ||||| |  ||||||||||||||||| ||||||| |||||||    
T  31711168 agaccaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 31711089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 36611127 - 36611056
Alignment:
Q  265 taaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaa 336  Q
    |||| |||||||  ||||| ||||||||||| |||||||||  |||| |  |||||||||||||||||||||    
T  36611127 taaaggaccaaaacgaaacttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggactaaa 36611056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 38371853 - 38371924
Alignment:
Q  277 ttgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||| ||||||  ||||||||||| |||| ||||||| |||||||||||||| |||  |||||| |||||||    
T  38371853 ttgagacgttttttagttaggggatcaaactgaaaacagaaaataagttaagagaccgaatgatgtattaag 38371924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 38555336 - 38555379
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||| | |||||| |||||||||||||||||    
T  38555336 atagttaggggaccaaagtaaaaactaaaaataagttaagggac 38555379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 44128394 - 44128453
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||||||||   |||||||||||| |||| ||| ||| |||||||    
T  44128394 atagttaggggaccaaattgaaaatgaaaaataagttaaaggaccaaacgatgtattaag 44128453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 5548577 - 5548627
Alignment:
Q  151 attagatgttggtgatacatagttagatttgatagatctcatttatccaac 201  Q
    ||||| ||||||| || ||||||||||||||||||| |||||| |||||||    
T  5548577 attaggtgttggtaattcatagttagatttgatagacctcattaatccaac 5548627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 15787543 - 15787621
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  ||||||| |||||| |  ||||||| |||||||    
T  15787543 gaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataaattaaggaaaaaaatgatatattaag 15787621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 28103527 - 28103597
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    ||||||||||| ||  || ||||||| ||||||||| ||||| |  ||||||||||||||||| |||||||    
T  28103527 gaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgat 28103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 28589844 - 28589782
Alignment:
Q  285 tttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||| ||| ||||||||| |||||||||||||| | ||||||||  |||||| |||||||    
T  28589844 tttaatacttatgggaccaaaatgaaaactgaaaattatttaagggatcaaatgacctattaa 28589782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 29688039 - 29688093
Alignment:
Q  294 taggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| |||||||  ||||||||||||||||| |||| || |||||||    
T  29688039 taggggaccaaagtgaaaaccaaaaataagttaagggaccaaataatgtattaag 29688093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 33376293 - 33376215
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||| |||||| || |||||||||||  ||||||||||||| ||| ||||||| |||||||    
T  33376293 gaccaaattgagacactttataattagggcactaaattgaaaaccaaaaataagttaagagaccaaatgatgtattaag 33376215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 38554005 - 38553927
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    |||||||||||| ||  || ||||||||  ||||||| | ||||| |||||||| ||||||||| ||||||| ||||||    
T  38554005 agaccaaattgagacactttatagttagaagaccaaaataaaaacagaaaataaattaagggaccaaatgatgtattaa 38553927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 44217688 - 44217627
Alignment:
Q  230 ataaaattggaccaaattgaatgatggaaagaa-gataaaagaccaaattgaaacgtttaata 291  Q
    ||||||| |||||||||||| ||||| ||| || |||||||||||||||| ||||||||||||    
T  44217688 ataaaataggaccaaattga-tgatgaaaacaaagataaaagaccaaattaaaacgtttaata 44217627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 44305020 - 44305098
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  ||  ||||||||||||||||||||||||  |||||||||||| | |  ||||||| |||||||    
T  44305020 gaccaaattgagacactttgtagttaggggaccaaattgaaaacaaaaaataagttaatgaatcaaatgatatattaag 44305098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 50498013 - 50498075
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||| ||| ||||||| | ||| || | ||||||||| |||||||    
T  50498013 gaccaaattgaaacgtttaataattaagggaccacactgagaaattaaaataagtgaagggac 50498075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 32617575 - 32617644
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    |||||||  ||||| ||||||||||| |||||||||  |||| |  ||||||||||||||||| ||||||    
T  32617575 gaccaaaacgaaacttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatga 32617644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 47243030 - 47242965
Alignment:
Q  267 aaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||| |||| ||||||||||| ||||  ||| ||| || | |||||||||||||||||    
T  47243030 aaagaccaaattaaaacatttaatagttaagggattaaactgagaaattaaaataagttaagggac 47242965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 47244031 - 47244092
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||||||||| |||||||||||| ||||||| | ||| || | ||||||| ||||||||    
T  47244031 gaccaaattgaaatgtttaatagttaagggaccacactgagaaattaaaataaattaaggga 47244092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 47572661 - 47572600
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||||| ||||||||||| ||||| ||  ||| || | ||||||||||||||||    
T  47572661 gaccaaattgaaacatttaatagttaagggactaagctgagaaattaaaataagttaaggga 47572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 48413592 - 48413653
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||||||||||||||||| || |||| | ||  || | ||||||||||||||||    
T  48413592 gaccaaattgaaacgtttaatagttaaggaaccacactgggaaattaaaataagttaaggga 48413653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 5688679 - 5688727
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaa 319  Q
    |||||||||| ||  || |||||||||||||||||||||||||| ||||    
T  5688679 accaaattgagacactttatagttaggggaccaaattgaaaactaaaaa 5688727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 15445517 - 15445449
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||||||| ||  || ||| ||||||||||||| ||||| |  |||||||||||||||||    
T  15445517 ataagagaccaaattgagacactttataattaggggaccaaaatgaaatccaaaaataagttaagggac 15445449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 40143710 - 40143662
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaat 337  Q
    ||||||||||||| ||| |||||||| ||||||||||||| ||| ||||    
T  40143710 atagttaggggactaaaatgaaaactaaaaataagttaagagaccaaat 40143662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 49922846 - 49922794
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||||||||||||||||  ||||||||||| || ||| ||| ||||||    
T  49922846 aaatttaaatgtttgattttgtagtttttgttgaaattaaaatgatgaatttt 49922794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 52880895 - 52880827
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaa-ctgaaaataagttaaggga 331  Q
    ||||| ||||||||||| ||  || ||||||||||||||||| | |||| | |||||||||||||||||    
T  52880895 ataaaggaccaaattgagacactttatagttaggggaccaaaataaaaatccgaaaataagttaaggga 52880827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 52981210 - 52981250
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagg 329  Q
    |||||| |||||||||| |||||||| ||||||||||||||    
T  52981210 atagtttggggaccaaaatgaaaactaaaaataagttaagg 52981250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 53400260 - 53400200
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggg 330  Q
    ||||||||||| ||  || ||||||| ||||||||| ||||| || |||||||||||||||    
T  53400260 gaccaaattgagacactttatagttatgggaccaaaatgaaatctaaaaataagttaaggg 53400200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 144 - 347
Target Start/End: Original strand, 14357796 - 14358000
Alignment:
Q  144 taaaataatt-agatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggacc 242  Q
    |||||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||| |||||       | | ||||||||  ||||||| |||||    
T  14357796 taaaataattcaggtgttggtgatacacagttagatatgatagatctcatttatccaacggtctcctttttttgggggttaaaattaataaaataggacc 14357895  T
Q  243 aaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatct 342  Q
    |||||||||||||||||||||||||| |||| | ||| | ||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| || |    
T  14357896 aaattgaatgatggaaagaagataaatgaccgatttggagcgtttaatagttaggggaccaaattaaaaactgaaaataagttaaaggaccaaataatat 14357995  T
Q  343 attaa 347  Q
    |||||    
T  14357996 attaa 14358000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 30916046 - 30916237
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||| ||||| |||||||| ||||||| || |||||||||| | |||||       |   ||||||||| || ||||  ||||||||||||||||||    
T  30916046 tgttggtaatacacagttagatctgatagacctaatttatccaatggtctcctttttttggaggttaaaatgaatgaaatatgaccaaattgaatgatgg 30916145  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||  ||  ||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||| |||||||    
T  30916146 aaagaagataaaagaccactttagaacgtttaatagttaggggactaaattgaaaacataaaataagttaagggaccaaatgatgtattaag 30916237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 159 - 347
Target Start/End: Original strand, 33362497 - 33362685
Alignment:
Q  159 ttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnn--gagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||| |||||||| ||||||| ||||||||||||| | |||||         ||| ||||||||| || |||| |||||||||||||||||||    
T  33362497 ttggtgatacacagttagatctgatagacctcatttatccaatggtctcctttttttttgag-gttaaaatgaatgaaataggaccaaattgaatgatgg 33362595  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    |||||||||||| |||||| |||||| ||||||||||||| |||||||||| |||||  ||||||||||||||||| ||||||| ||||||    
T  33362596 aaagaagataaaggaccaatttgaaa-gtttaatagttagaggaccaaattaaaaacaaaaaataagttaagggaccaaatgatatattaa 33362685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 220 - 329
Target Start/End: Complemental strand, 14356557 - 14356448
Alignment:
Q  220 gttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaa 319  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||||||||| |||||| ||  ||| |||||||||||| ||||||||||||||||||||||    
T  14356557 gttaaaatgaataaaataggatcaaattgaatgatggaaagaagataaacgaccaatttagaacatttaatagttagaggaccaaattgaaaactgaaaa 14356458  T
Q  320 taagttaagg 329  Q
    ||||||||||    
T  14356457 taagttaagg 14356448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 233 - 348
Target Start/End: Complemental strand, 30912426 - 30912311
Alignment:
Q  233 aaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||||||||||||| |||||||||||| ||| |  ||| |||||||||||||||| |||| ||||||||||| ||||||||||||||| ||    
T  30912426 aaataggaccaaattgaatgatgtaaagaagataaaggactactttggaacgtttaatagttagaggactaaattgaaaacagaaaataagttaaggaac 30912327  T
Q  333 taaatgatctattaag 348  Q
     ||||||| |||||||    
T  30912326 caaatgatgtattaag 30912311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 12936143 - 12936221
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  12936143 gaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggactaaatgatgtattaag 12936221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 9038573 - 9038502
Alignment:
Q  233 aaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    |||| |||||||||||||| ||||||| |||||||||||| ||||||||| |||||||| ||| ||||||||    
T  9038573 aaataggaccaaattgaattatggaaacaagataaaagactaaattgaaatgtttaataattaagggaccaa 9038502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 19524059 - 19523980
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || ||||||| |||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  19524059 agaccaaattgagacactttatagttaagggaccaaattgaaaaccaaaaataagttaagggaccaaatgatatattaag 19523980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 19525348 - 19525407
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  19525348 atagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 19525407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 12950301 - 12950379
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||   |||||||||||||||||||||||| |||||||    
T  12950301 gaccaaattgagacactttatagttaggggaccaaaatgaaaaccataaataagttaagggactaaatgatgtattaag 12950379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 39134741 - 39134680
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  39134741 accaaattgaaacgtttaatagttaagggaccaaactgagaatttaaaataagttaagggac 39134680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 19825955 - 19825871
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||| |||||  |||| ||||||  ||||||||||| ||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  19825955 ataaaggaccagtttgagacgttttttagttaggggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 19825871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 348
Target Start/End: Complemental strand, 42962220 - 42962020
Alignment:
Q  148 ataattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaatt 247  Q
    |||||||| |||||||||||||   |||||| | ||||| ||| ||||||||||| ||| |       |||  |||||||  ||||||| ||||||||||    
T  42962220 ataattaggtgttggtgatacaccattagatcttatagacctcctttatccaacggtcttctttttgagaggtttaaaattaataaaataggaccaaatt 42962121  T
Q  248 gaatgatggaaagaa-gataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatta 346  Q
    || ||||| ||| || |||||| |||||| || || |||||||||||||||||||||| | |||||    || ||||||||||||| ||| ||| |||||    
T  42962120 ga-tgatgaaaacaaagataaaggaccaatttaaagcgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggacaaaacgatgtatta 42962022  T
Q  347 ag 348  Q
    ||    
T  42962021 ag 42962020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 12933807 - 12933748
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||||||| |||||||    
T  12933807 atagttaggggatcaaaatgaaaaccaaaaataagttaagggactaaatgatatattaag 12933748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 27894063 - 27894142
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||||  || ||||||||||||||||| |||||||  ||||||||||||| ||| ||| ||| |||||||    
T  27894063 agaccaaattgaaacactttatagttaggggaccaaagtgaaaacaaaaaataagttaagcgaccaaacgatgtattaag 27894142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 41905231 - 41905172
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  41905231 atagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaatgatgtattaag 41905172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 42963247 - 42963298
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaa 312  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  42963247 aagataaatgaccaaattgaaacgtttaatagttagaggaccaatttgaaaa 42963298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 224630 - 224708
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    |||||||||||| ||  || ||||||||||||||||| |||||||  ||||||||||||||||| | ||||| ||||||    
T  224630 agaccaaattgagacactttatagttaggggaccaaaatgaaaacataaaataagttaagggaccagatgatgtattaa 224708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 8762441 - 8762519
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| ||||| | |||||||||||||||| | ||||||||||||||||| ||| ||| |||||||    
T  8762441 gaccaaattgagacattttatagtcatgggaccaaattgaaaattaaaaataagttaagggaccaaacgatatattaag 8762519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 11907202 - 11907264
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| ||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  11907202 gaccaaattgaaacatttaatagttaagggaccaaactgagaaattaaaataagttaagggac 11907264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 18678051 - 18677973
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||| |||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  18678051 gaccaaattgagacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaag 18677973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 19827181 - 19827259
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||| ||| |||||||||||||||||  ||||||||||||| ||||||||||| |||||||    
T  19827181 gaccaaattgagacactttataattatgggaccaaattgaaaaccaaaaataagttaagagactaaatgatgtattaag 19827259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 14357660 - 14357712
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  14357660 aaatttaaatgtttgattttgtgaattttgttgaagttgaaatgatgaatttt 14357712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 328214 - 328273
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||||||||||||||  ||||||||||||| ||  ||||||| |||||||    
T  328214 atagttaggggaccaaattgaaaacaaaaaataagttaagtgatcaaatgatgtattaag 328273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 6629787 - 6629728
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| |||||||   |||||||||||||||| ||||||| |||||||    
T  6629787 atagttaggggaccaaagtgaaaaccacaaataagttaagggaccaaatgatgtattaag 6629728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 12947968 - 12947909
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| |||| ||||||   ||||||||||||||||||||||||| |||||||    
T  12947968 atagttaggggatcaaaatgaaaatcaaaaataagttaagggactaaatgatatattaag 12947909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 1273164 - 1273086
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| |||||||  |||||||| |||||||  ||||||| ||||||||| ||||||| |||||||    
T  1273164 gaccaaattgagacattttatagttaaaggaccaaaatgaaaaccaaaaataaattaagggaccaaatgatgtattaag 1273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 4568015 - 4568077
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  4568015 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 4568077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 5383017 - 5382939
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||| ||||| |||||||| ||||||  ||||||||||||||||| ||||||| |||||||    
T  5383017 gaccaaattgagacactttataattaggagaccaaatagaaaaccaaaaataagttaagggaccaaatgatgtattaag 5382939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 23679218 - 23679160
Alignment:
Q  274 aaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||| ||||||||| |||||| | ||||||| || ||||||    
T  23679218 aaattgaaacgtttaatagttaagggaccaaactgaaaaattaaaataaatttagggac 23679160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 23855594 - 23855652
Alignment:
Q  274 aaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||| ||||||||| |||||| | ||||||| || ||||||    
T  23855594 aaattgaaacgtttaatagttaagggaccaaactgaaaaattaaaataaatttagggac 23855652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 40059385 - 40059447
Alignment:
Q  286 ttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||| |||| |||||||  ||||||||||||||||| |||| || |||||||    
T  40059385 ttaatagttaggggatcaaaatgaaaaccaaaaataagttaagggaccaaattatatattaag 40059447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 20991690 - 20991751
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||||||| || ||| ||||||||||| ||||| ||||| | |||||||||||||||||    
T  20991690 gaccaaattgagacattttatagttagggggccaaaatgaaatccgaaaataagttaaggga 20991751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 30915817 - 30915765
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  30915817 aaatttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 30915765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 223282 - 223223
Alignment:
Q  289 atagttaggggaccaaattg-aaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||||||||||||| || |||||| ||||||||||||||||| ||| ||| ||||||    
T  223282 atagttaggggaccaaagtggaaaactaaaaataagttaagggacaaaacgatatattaa 223223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 19050824 - 19050762
Alignment:
Q  270 gaccaaattgaaac-gtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| || |||||| ||||||||||||||||||||| |  |||||||||||||||||    
T  19050824 gaccaaattgagacagtttaa-agttaggggaccaaattgaaatccaaaaataagttaagggac 19050762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 20841827 - 20841894
Alignment:
Q  265 taaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||  ||||| ||||||||||| ||||||||| ||||| |  |||||||||||||||||    
T  20841827 taaaggaccaaaacgaaacttttaatagttaagggaccaaaatgaaaccaaaaaataagttaagggac 20841894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 26403363 - 26403304
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| ||||||||||||||||   |||||||||||| |||||| ||||| |||||||    
T  26403363 atagttaagggaccaaattgaaaatcaaaaataagttaaaggactatatgatgtattaag 26403304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 33362363 - 33362414
Alignment:
Q  21 aatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    |||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  33362363 aatttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 33362414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 36442305 - 36442238
Alignment:
Q  265 taaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| ||||||| |||||| ||||||||||| |||||||||  |||| |  |||||||||||||||||    
T  36442305 taaaggaccaaaatgaaacttttaatagttaagggaccaaaacgaaagcaaaaaataagttaagggac 36442238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 1156044 - 1155982
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||| |||||| ||||||||||| |||||||||  |||| |  |||||||||||||||||    
T  1156044 gaccaaaatgaaacttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggac 1155982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 5384387 - 5384465
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||| |||||||||||   ||||||| |||||| || ||||||| |||||||    
T  5384387 gaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaaggaaccaaatgatgtattaag 5384465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 10570361 - 10570423
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||  ||||| ||||||||||| ||||||||| ||||| |  |||||||||||||||||    
T  10570361 gaccaaaacgaaacttttaatagttaagggaccaaaatgaaaccaaaaaataagttaagggac 10570423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 15509270 - 15509208
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| | ||| | ||||||||||||||||||    
T  15509270 gaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggac 15509208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 15510304 - 15510366
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || |||||||||||| |||| ||||| | ||||||||||||||||||    
T  15510304 gaccaaattgagacactttatagttaggggatcaaaatgaaatccgaaaataagttaagggac 15510366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 21387712 - 21387650
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| || ||| ||||||||||||||||| |||||    |||||||||||||||||    
T  21387712 gaccaaattgagacattttatagttaggggaccaaaatgaaattcaaaaataagttaagggac 21387650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 24070480 - 24070418
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||||| |||| || | ||| || | ||||||| |||||||||    
T  24070480 gaccaaattgaaacgtttaatagttaagggatcacactgagaaattaaaataaattaagggac 24070418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 39135689 - 39135767
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||| ||||||||||| |||| |||| ||| || | |||||||||||| ||||   | |||||||||||    
T  39135689 gaccaaattgaaacatttaatagttaagggagcaaactgagaaattaaaataagttaaaggaccggaggatctattaag 39135767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 42382151 - 42382213
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||  ||||| ||||||||||| |||||||||| |||| |  |||||||||||||||||    
T  42382151 gaccaaaacgaaacttttaatagttaagggaccaaatcgaaaccaaaaaataagttaagggac 42382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 22650669 - 22650726
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaa 327  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | |||||||||||||    
T  22650669 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaa 22650726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 24071484 - 24071545
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||||| ||||||| ||| || || ||| |||||| | ||||||||||||||||    
T  24071484 gaccaaattgaaacatttaataattaaggaactaaactgaaaaattaaaataagttaaggga 24071545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 641921 - 641976
Alignment:
Q  270 gaccaaattgaaac-gtttaatagttaggggaccaaattgaaaactgaaaataagtt 325  Q
    ||||||||||| || |||||| ||||||||||||||||||||| || ||||||||||    
T  641921 gaccaaattgagacagtttaa-agttaggggaccaaattgaaatctaaaaataagtt 641976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 1273383 - 1273459
Alignment:
Q  272 ccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||| ||  || ||| ||| ||||||||| |||||||  ||||||||||||||||| ||| ||| |||||||    
T  1273383 ccaaattgagacactttataattaagggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatatattaag 1273459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 1663216 - 1663184
Alignment:
Q  316 aaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||||||||| |||||||    
T  1663216 aaaataagttaagggactaaatgatgtattaag 1663184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 20988771 - 20988703
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||| ||||||| ||  || ||||||||||||||||| |||||   ||||||||||||||||||    
T  20988771 ataagagactaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 20988703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 30915896 - 30915948
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||| |||||||  |||| |||||||||||||||||| ||| ||||||    
T  30915896 aaatttaaaggtttgatggtgtggtttttgttgaagttgaaatgatgaatttt 30915948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 1e-48; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 161 - 348
Target Start/End: Original strand, 4973981 - 4974168
Alignment:
Q  161 ggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatggaaag 260  Q
    ||||||||| |||||||| ||||||||||||| ||||||||| |||||       | | ||||||||| ||||||||||||||||||||| |||||||||    
T  4973981 ggtgatacacagttagatctgatagatctcatctatccaacggtctccttttcttgggggttaaaatgaataaaattggaccaaattgaacgatggaaag 4974080  T
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||  ||||| || |||||||||||||||| | || ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  4974081 aagataaagaaccaatttaaaacgtttaatagttaagagatcaaattgaaaattgaaaataaattaagggactaaatgatctattaag 4974168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 154 - 348
Target Start/End: Original strand, 22794247 - 22794440
Alignment:
Q  154 agatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatga 253  Q
    |||||||||||||||| | |||||| ||||||| |||||||||||||||||||||       | | ||||||||| ||||||| ||||||||||||| ||    
T  22794247 agatgttggtgatacacaattagatctgatagacctcatttatccaacgatctcctttttttgggggttaaaatgaataaaataggaccaaattgaagga 22794346  T
Q  254 tggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||| ||||||||| || ||| ||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||| |||||||    
T  22794347 tggaaggaagataaaggaacaatttggaacgtttaatagttaggggaccaaattgaaaacag-aaataagttaagggaccaaacgatgtattaag 22794440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 4973702 - 4973510
Alignment:
Q  156 atgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatg 255  Q
    |||||||||||||| |||||||| ||||||| ||||| ||||||||| ||||        ||| ||| ||||| ||||||| ||||||||||||| ||||    
T  4973702 atgttggtgatacacagttagatatgatagacctcatctatccaacggtctcattttcttgagggttcaaatgaataaaataggaccaaattgaacgatg 4973603  T
Q  256 gaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
     ||||||||||||  ||||| ||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || |||||||    
T  4973602 aaaagaagataaagaaccaatttagaacgtttaatagttaaaggaccaaattgaaaactgaaaataagttaagggactaaataatgtattaag 4973510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 144 - 332
Target Start/End: Complemental strand, 29657192 - 29657002
Alignment:
Q  144 taaaataatt-agatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnn-gagtgttaaaatggataaaattggac 241  Q
    |||||||||| || ||||||||||||| |||||||| |||||| |||||||||||||||| ||||         | | ||||||||  ||||||| |||     
T  29657192 taaaataattcaggtgttggtgatacacagttagatctgatagttctcatttatccaacggtctcgttgtttttgggggttaaaattaataaaataggat 29657093  T
Q  242 caaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||| ||| |||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29657092 caaattgaatgatggagagatgataaaggaccaattttgaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 29657002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 154 - 340
Target Start/End: Original strand, 32894721 - 32894908
Alignment:
Q  154 agatgttggtgatacatagtt-agatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatg 252  Q
    |||||||||||||||| | || | || ||||||||||||||||||||||| ||| |       ||| ||| ||||| ||||||| |||||||||| ||||    
T  32894721 agatgttggtgatacacactttaaatctgatagatctcatttatccaacggtcttcttttcttgagggtttaaatgaataaaataggaccaaatttaatg 32894820  T
Q  253 atggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    |||| ||||||||||| |||||| || |||| |||||||||||| ||| ||||||||||| ||||||||||||||||||| |||||||    
T  32894821 atgggaagaagataaatgaccaatttaaaacttttaatagttagaggatcaaattgaaaattgaaaataagttaagggaccaaatgat 32894908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 157 - 331
Target Start/End: Complemental strand, 32893645 - 32893470
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| |||||||| ||||||| | || |||||||||| |||||       | | ||||||||| |||||||  ||||||||||||||||||    
T  32893645 tgttggtgatacacagttagatctgatagaccacacttatccaacggtctccttttcttgggggttaaaatgaataaaataagaccaaattgaatgatgg 32893546  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactg-aaaataagttaaggga 331  Q
    |||||||||||| || ||| ||  |||||||| |||||| | ||||||||| ||||||| ||||||||||||||||    
T  32893545 aaagaagataaaggatcaatttagaacgtttactagttaagagaccaaattaaaaactgaaaaataagttaaggga 32893470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 220 - 348
Target Start/End: Original strand, 29658604 - 29658732
Alignment:
Q  220 gttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaa 319  Q
    ||||||||| ||||||| ||| ||||| |||||||| |||||||||||| |||||| || || |||||||||||||| |||| |||||||||||| ||||    
T  29658604 gttaaaatgaataaaataggatcaaatagaatgatgaaaagaagataaaggaccaatttaaaccgtttaatagttagaggactaaattgaaaactaaaaa 29658703  T
Q  320 taagttaagggactaaatgatctattaag 348  Q
    ||||||||  ||| ||||||| |||||||    
T  29658704 taagttaaatgaccaaatgatgtattaag 29658732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 22061836 - 22061914
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  22061836 gaccaaattgagacgttttatagttaggggaccaaattgaaaacacaaaataagttaagggacaaaatgatgtattaag 22061914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 43006460 - 43006382
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  43006460 gaccaaattgagacacttaatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 43006382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 43930394 - 43930316
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| |||||||||||||||||||||||| ||||||   ||||||||||||||||| ||||||| |||||||    
T  43930394 gaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaagggaccaaatgatatattaag 43930316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 4858385 - 4858463
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| |||||||||||| |||| |||||||| ||||||||||||||||| ||||||| |||||||    
T  4858385 gaccaaattgagacattttatagttaggggatcaaagtgaaaactaaaaataagttaagggaccaaatgatgtattaag 4858463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 25153733 - 25153655
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||||||||||  |||||||||||||||||| ||||||| |||||||    
T  25153733 gaccaaattgagacactttatagttaggggaccaaattgaaaatcgaaaataagttaagggaccaaatgatgtattaag 25153655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 40926560 - 40926638
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  40926560 gaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaag 40926638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 22744821 - 22744743
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || ||||||||||||| ||||||||||   ||||||||||||||||| ||||||| |||||||    
T  22744821 gaccaaattgaaacactttatagttaggggactaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaag 22744743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 7146855 - 7146799
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagtta 326  Q
    ||||||||||||||  || ||||||||||||||||||||||||| ||||||||||||    
T  7146855 gaccaaattgaaacactttatagttaggggaccaaattgaaaacagaaaataagtta 7146799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 23153662 - 23153706
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaa 305  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  23153662 aagataaatgaccaaattgaaacgtttaatagttaggggaccaaa 23153706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 221 - 312
Target Start/End: Complemental strand, 47535783 - 47535692
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaa-gataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaa 312  Q
    |||||||  ||||||| |||||||||||| ||||  ||| || |||||| |||||||||||||||||||||||||||||||| || |||||||    
T  47535783 ttaaaattaataaaataggaccaaattga-tgataaaaacaaagataaaggaccaaattgaaacgtttaatagttaggggactaatttgaaaa 47535692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 348
Target Start/End: Complemental strand, 16955776 - 16955689
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||| |||||||    || ||||||||||||| | |||||| ||||||    
T  16955776 aagataaatgaccaaattgaaacgtttaatagctagggaaccaatttgaaaaaaagaattaagttaagggaccagatgatcaattaag 16955689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 17287149 - 17287083
Alignment:
Q  270 gaccaaattgaaac-gtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaa 336  Q
    |||||||||||||| |||||| ||||||||||||||||||||| || | |||||||||||||||||||    
T  17287149 gaccaaattgaaacagtttaa-agttaggggaccaaattgaaatctaataataagttaagggactaaa 17287083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 43704484 - 43704571
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| |||||  |||||||||||||||||||||||||||| | |||||    || ||||||||||||| |||||||| ||||||    
T  43704484 aagataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaaaaaataattaagttaagggaccaaatgatcaattaag 43704571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 7148099 - 7148161
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||  || ||||||||  ||||||||||||||| ||||||||||||||||||    
T  7148099 gaccaaattgaaacactttatagttagatgaccaaattgaaaacagaaaataagttaagggac 7148161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 19279653 - 19279731
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  ||||||||||||||||| ||| ||| |||||||    
T  19279653 gaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaacgatgtattaag 19279731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 33459584 - 33459662
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||| |||||||| |||||||  ||||||||||| ||||||||||||| |||||||    
T  33459584 gaccaaattgagacactttatagttagaggaccaaaatgaaaaccaaaaataagttatgggactaaatgatgtattaag 33459662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 41126314 - 41126252
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| ||||||||||||||||||||    
T  41126314 gaccaaattgagacactttatagttaggggaccaaaatgaaatctgaaaataagttaagggac 41126252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 44114720 - 44114774
Alignment:
Q  294 taggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||    
T  44114720 taggggaccaaaatgaaaactaaaaataagttaagggaccaaatgatgtattaag 44114774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 47537081 - 47537143
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| ||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  47537081 gaccaaattgaaacatttaatagttaagggaccaaactgagaagttaaaataagttaagggac 47537143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 346
Target Start/End: Complemental strand, 4857276 - 4857200
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatta 346  Q
    |||||||| || || ||| ||||||||||||||||| |||||||  ||||||||||||||||  ||||||| |||||    
T  4857276 gaccaaatcgagacattttatagttaggggaccaaagtgaaaaccaaaaataagttaagggatcaaatgatgtatta 4857200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 4973829 - 4973881
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||    
T  4973829 aaatttaaatgtttgattttgtggtttttgttcaagttgaaatgatgaatttt 4973881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 18802449 - 18802508
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| |||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  18802449 atagttaggggatcaaaatgaaaacaaaaaataagttaagggaccaaatgatgtattaag 18802508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 36584937 - 36585024
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| |||||  |||||| ||||||||||||||||||||| | |||||    || ||||||||||||| |||||||| ||||||    
T  36584937 aagataaaggaccattttgaaatgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggaccaaatgatcaattaag 36585024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 46203574 - 46203625
Alignment:
Q  149 taattagatgttggtgatacatagttagatttgatagatctcatttatccaa 200  Q
    |||||||||||||||||||||  ||||||||| ||||||||| |||||||||    
T  46203574 taattagatgttggtgatacaccgttagattttatagatctcttttatccaa 46203625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 25154996 - 25155054
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||| |||| ||||||||||||  ||||||||||||||||| ||||||| ||||||    
T  25154996 atagttaagggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaa 25155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 29409159 - 29409217
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctcc 208  Q
    |||||| ||||||| |||||  ||||||| ||||||||||||||||||||||| |||||    
T  29409159 aattaggtgttggttatacactgttagatctgatagatctcatttatccaacggtctcc 29409217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 30224017 - 30224079
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  30224017 gaccaaattgagacaatttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 30224079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 33070683 - 33070645
Alignment:
Q  267 aaagaccaaattgaaacgtttaatagttaggggaccaaa 305  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  33070683 aaagaccaaattgaaacgtttaatagttaagggaccaaa 33070645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 35128231 - 35128281
Alignment:
Q  298 ggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  35128231 ggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 35128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 36673877 - 36673939
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| || ||| ||||||||||||||||| | ||| | ||||||||||||||||||    
T  36673877 gaccaaattgagacattttatagttaggggaccaaaataaaatccgaaaataagttaagggac 36673939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 40881166 - 40881104
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||| |||||||||| ||||||| | ||| || | |||||||||||||||||    
T  40881166 gaccaaattgaaacggttaatagttaagggaccacactgagaaattaaaataagttaagggac 40881104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 41616699 - 41616637
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  41616699 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 41616637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 43931907 - 43931985
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||||||||||||||| |||||| | ||||||   ||||||| |||||| || ||||||| |||||||    
T  43931907 gaccaaattgatacgtttaatagttagaggaccagagtgaaaataaaaaataaattaaggaaccaaatgatgtattaag 43931985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 45721808 - 45721866
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagg 329  Q
    |||||||||| ||  || ||||||||||||||||| |||||||| ||||||||||||||    
T  45721808 accaaattgagacactttatagttaggggaccaaaatgaaaactaaaaataagttaagg 45721866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 14206748 - 14206687
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||||| ||| ||||||||| ||||||| |||||||  ||||||| ||||||||    
T  14206748 gaccaaattgaaacattttatagttaggcgaccaaagtgaaaaccaaaaataaattaaggga 14206687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 14215438 - 14215377
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||||| ||| ||||||||| ||||||| |||||||  ||||||| ||||||||    
T  14215438 gaccaaattgaaacattttatagttaggcgaccaaagtgaaaaccaaaaataaattaaggga 14215377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 22060537 - 22060460
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||| ||  || |||||||| |||||||||| |||||  ||||||||||||| ||| ||||||| |||||||    
T  22060537 accaaattgagacactttatagttagaggaccaaattaaaaacacaaaataagttaagtgaccaaatgatatattaag 22060460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 22746361 - 22746438
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||||||| ||  || ||||||||||||| |||||||||||  |||||||||||| |||| |||| || ||||||    
T  22746361 gaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaaaggaccaaataatgtattaa 22746438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 339
Target Start/End: Complemental strand, 23350995 - 23350926
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    |||||||  ||||| ||||||||||| |||||||||  |||| |  ||||||||||||||||||||||||    
T  23350995 gaccaaaacgaaacttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggactaaatga 23350926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 22794117 - 22794169
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  22794117 aaatttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 22794169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 29657330 - 29657278
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    |||||||||||||||||||| ||  ||||||||||||||||| ||| ||||||    
T  29657330 aaatttaaatgtttgattttttggattttgttgaagttgaaatgatgaatttt 29657278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 32893769 - 32893717
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    |||||||||| || ||||||||| |||||||||||||||||| ||| ||||||    
T  32893769 aaatttaaattttcgattttgtggtttttgttgaagttgaaatgatgaatttt 32893717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 348
Target Start/End: Original strand, 47536769 - 47536969
Alignment:
Q  148 ataattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaatt 247  Q
    |||||||| |||||||||||||   |||||| ||||||| ||| ||||||||||| ||| |       ||   |||||||  ||||||| ||||||||||    
T  47536769 ataattaggtgttggtgatacaccattagatctgatagacctcttttatccaacggtcttctttttgagaagtttaaaatcaataaaataggaccaaatt 47536868  T
Q  248 gaatgatggaaagaa-gataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatta 346  Q
    || ||||  ||| || |||||| |||||| || ||  ||||||||||||||||||||| | |||||    || ||||||||||||| ||| ||| |||||    
T  47536869 ga-tgataaaaacaaagataaaggaccaatttaaagtgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggaccaaacgatgtatta 47536967  T
Q  347 ag 348  Q
    ||    
T  47536968 ag 47536969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 14109129 - 14109180
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    ||||||| ||||||||| |||||| | ||||||||||||||||| |||||||    
T  14109129 atagttaagggaccaaagtgaaaattaaaaataagttaagggaccaaatgat 14109180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 14419086 - 14419137
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    ||||||| ||||||||| |||||| | ||||||||||||||||| |||||||    
T  14419086 atagttaagggaccaaagtgaaaattaaaaataagttaagggaccaaatgat 14419137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 34558361 - 34558404
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||    
T  34558361 atagttaggggaccaaaatgaaatccgaaaataagttaagggac 34558404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 38002546 - 38002613
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaag 328  Q
    |||||||  ||||||||||| ||  || ||||||| ||||||||| ||||| ||||||||||||||||    
T  38002546 aagataagggaccaaattgagacactttatagttaagggaccaaaatgaaatctgaaaataagttaag 38002613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 41127206 - 41127273
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||| ||||||||||| |   || ||||||||||||||||| ||||| | |||||||||||||||||    
T  41127206 ataaaggaccaaattgagatactttatagttaggggaccaaaatgaaatccgaaaataagttaaggga 41127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 46196940 - 46196897
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||    
T  46196940 aagataaacgaccaaattaaaacatttaatagttaggggaccaa 46196897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 46203686 - 46203725
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttagggga 300  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  46203686 aagataaaagactaaattaaaacgtttaatagttagggga 46203725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 46674994 - 46675053
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| |||| ||||||||||||  ||||||||||||||||  ||||||| |||||||    
T  46674994 atagttaagggatcaaattgaaaaccaaaaataagttaagggatcaaatgatgtattaag 46675053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 2904092 - 2904150
Alignment:
Q  274 aaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||| || ||| ||||||||||||||||| |||||  ||||||||| |||||||||    
T  2904092 aaattgagacattttatagttaggggaccaaaatgaaatttgaaaataaattaagggac 2904150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 17288261 - 17288323
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| | |||||  |||||||||||||||||    
T  17288261 gaccaaattgagacactttatagttaggggaccaaaattaaaacaaaaaataagttaagggac 17288323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 19069930 - 19069992
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||| |||||| || |||||||| ||||||||| ||||| |  |||||||||||||||||    
T  19069930 gaccaaaatgaaactttcaatagttaagggaccaaaatgaaaccaaaaaataagttaagggac 19069992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 19278428 - 19278350
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||| ||| ||||||||| ||||| |  ||||||||||||||||| ||||||| |||||||    
T  19278428 gaccaaattgagacactttataattaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 19278350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 21171527 - 21171589
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || | ||||||||||||||||||||| |  |||||||||||||||||    
T  21171527 gaccaaattgagacaatttaaagttaggggaccaaattgaaatccaaaaataagttaagggac 21171589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 29344239 - 29344177
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||| |||||||||||||||| |||  |||| ||| || | |||||||||||||||||    
T  29344239 gaccaaattaaaacgtttaatagttaaggggtcaaactgagaaattaaaataagttaagggac 29344177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 38001579 - 38001517
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||  || |||||||| |||||||| |||||   ||||||||||||||||||    
T  38001579 gaccaaattgaaacactttatagttagaggaccaaaatgaaattcgaaaataagttaagggac 38001517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 40930493 - 40930415
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || ||||||||||||||||| |||||||  ||||||| | ||||||  ||| ||| |||||||    
T  40930493 gaccaaattgaaacactttatagttaggggaccaaagtgaaaaccaaaaataaatcaagggatcaaacgatgtattaag 40930415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 41516404 - 41516462
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||||||||||||| | |||||  ||||||||||||| ||| ||||||| ||||||    
T  41516404 atagttaggggaccaaaattaaaacaaaaaataagttaagagaccaaatgatatattaa 41516462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 43007690 - 43007768
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||| |||||||||||||||   |||||||||| | |||| ||||||| |||||||    
T  43007690 gaccaaattgagacactttatagttagaggaccaaattgaaaatcaaaaataagttgaaggaccaaatgatatattaag 43007768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 46457145 - 46457067
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||| |||| ||||||||||||  |||||||||||||| || ||| ||| |||||||    
T  46457145 gaccaaattgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaaggaaccaaacgatgtattaag 46457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 46673565 - 46673512
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataag 323  Q
    ||||||||||||||  || || ||||||||||||||||||||||  ||||||||    
T  46673565 gaccaaattgaaacactttattgttaggggaccaaattgaaaaccaaaaataag 46673512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 16957441 - 16957473
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttag 296  Q
    ||||| |||||||||||||||||||||||||||    
T  16957441 ataaaggaccaaattgaaacgtttaatagttag 16957473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 19105587 - 19105639
Alignment:
Q  280 aaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| ||||||||||| ||||||||| ||||| |  |||||||||||||||||    
T  19105587 aaacttttaatagttaagggaccaaaatgaaatcaaaaaataagttaagggac 19105639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 29408439 - 29408391
Alignment:
Q  152 ttagatgttggtgatacatagttagatttgatagatctcatttatccaa 200  Q
    |||| |||||||||||||  ||||||| ||||||| |||||||||||||    
T  29408439 ttaggtgttggtgatacaccgttagatctgatagacctcatttatccaa 29408391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 42520290 - 42520227
Alignment:
Q  277 ttgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatc 341  Q
    ||||||||||||||| |||||||||||| | |||||   ||| ||||||||||||| ||||||||    
T  42520290 ttgaaacgtttaatatttaggggaccaattcgaaaa-aaaaattaagttaagggaccaaatgatc 42520227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 48336535 - 48336344
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| |||||||| | ||| | ||||||||||||||| |||||       | | ||||||||| ||||||| |||||||||||||||||||    
T  48336535 tgttggtgatacacagttagatctaataaacctcatttatccaacggtctccttttcttgggggttaaaatgaataaaataggaccaaattgaatgatgg 48336436  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| || ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  48336435 aaagaagataaatgatcaatttggaacgtttaatagttagaggaccaaattgaaaactgaaaataagttaagggagcaaatgatgtattaag 48336344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 48338045 - 48338236
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| |||||||| ||||||| ||||| |||||| || |||||       |   ||||||||| ||||||| |||||||||||||||||||    
T  48338045 tgttggtgatacacagttagatctgatagacctcatatatccagcggtctccttttcttggtggttaaaatgaataaaataggaccaaattgaatgatgg 48338144  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| |||||| ||  ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  48338145 aaagaagataaaggaccaatttagaacgtttaatagtcagggaaccaaattgaaaactgaaaataagttaagggaccaaatgatgtattaag 48338236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 150 - 348
Target Start/End: Original strand, 14206702 - 14206899
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattga 249  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||||||||||| ||||        |  |||||||||| ||||||| ||||||||||||    
T  14206702 aattagatattggtgatacacagttagatctgatagacctcatttatccaacg-tctcatttttatggatgttaaaatgaataaaataggaccaaattga 14206800  T
Q  250 atgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||| |||||||||| ||||| |||||||| ||||||||| |||| || |||||||    
T  14206801 atgatggaaagaagataaatgaccaatttaaaacgtttaatagttagaggaccaaattaaaaacagaaaataaattaagggaccaaataatgtattaag 14206899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 150 - 348
Target Start/End: Original strand, 14214450 - 14214647
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattga 249  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||||||||||| ||||        |  |||||||||| ||||||| ||||||||||||    
T  14214450 aattagatattggtgatacacagttagatctgatagacctcatttatccaacg-tctcatttttatggatgttaaaatgaataaaataggaccaaattga 14214548  T
Q  250 atgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||| |||||||||| ||||| |||||||| ||||||||| |||| || |||||||    
T  14214549 atgatggaaagaagataaatgaccaatttaaaacgtttaatagttagaggaccaaattaaaaacagaaaataaattaagggaccaaataatgtattaag 14214647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 218 - 332
Target Start/End: Complemental strand, 14213259 - 14213145
Alignment:
Q  218 gtgttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaa 317  Q
    ||||||||||  ||||||| | | ||||||||||||||||| ||||||||| |||||| || |||||||| ||||||||||||||||||||||||| |||    
T  14213259 gtgttaaaataaataaaatagaatcaaattgaatgatggaaggaagataaaggaccaatttaaaacgtttgatagttaggggaccaaattgaaaacagaa 14213160  T
Q  318 aataagttaagggac 332  Q
    ||||| |||||||||    
T  14213159 aataaattaagggac 14213145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 25583189 - 25583111
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| |||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||| |||||||    
T  25583189 gaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaagggactaaatgatgtattaag 25583111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 41387474 - 41387552
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  41387474 gaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 41387552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 53809533 - 53809612
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||| ||||||| |||||| | ||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  53809533 agacaaaattgagacgttttaaagttaggggaccaaaatgaaaacaaaaaataagttaagggactaaatgatgtattaag 53809612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 304
Target Start/End: Complemental strand, 8895344 - 8895197
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    |||||||||||||  ||||||| ||||||| || |||||||| | |||||||       | | ||||||||  || |||| |||||||||||||||| ||    
T  8895344 tgttggtgatacacggttagatctgatagacctaatttatccgatgatctccttttttagggggttaaaattaatgaaataggaccaaattgaatgaagg 8895245  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    ||| || | ||| ||||||||||||||||||| ||||||| |||||||    
T  8895244 aaacaataaaaatgaccaaattgaaacgtttagtagttagtggaccaa 8895197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 220 - 304
Target Start/End: Complemental strand, 50719781 - 50719696
Alignment:
Q  220 gttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaac-gtttaatagttaggggaccaa 304  Q
    |||||||| |||||||| | |||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||  |||||||    
T  50719781 gttaaaattgataaaatagaaccaaattgaatgatggaaacaagacaaaggaccaaattgaaacggtttaatagttaatggaccaa 50719696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 50793067 - 50793152
Alignment:
Q  220 gttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaac-gtttaatagttaggggaccaa 304  Q
    |||||||| |||||||| | |||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||  |||||||    
T  50793067 gttaaaattgataaaatagaaccaaattgaatgatggaaacaagacaaaggaccaaattgaaacggtttaatagttaatggaccaa 50793152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 17350143 - 17350221
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||| ||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  17350143 gaccaaattgagacactttatagttaggggaacaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 17350221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 19579295 - 19579233
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| || ||| ||||||||||||||||| ||||| ||||||||||||||||||||    
T  19579295 gaccaaattgagacattttatagttaggggaccaaaatgaaatctgaaaataagttaagggac 19579233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 8371294 - 8371217
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||| || ||| ||||||||||||||||| |||||||  ||||||||||||||||  ||||||| |||||||    
T  8371294 accaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaataagttaagggatcaaatgatgtattaag 8371217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 41386204 - 41386127
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||| ||  || |||||||||||||||||||||||||  ||||||||||||||||| ||| ||| |||||||    
T  41386204 accaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaacgatgtattaag 41386127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 45730710 - 45730650
Alignment:
Q  272 ccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  45730710 ccaaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggac 45730650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 42632762 - 42632703
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||||||||||||||  ||| ||||||||||||| ||||||| |||||||    
T  42632762 atagttaggggaccaaattgaaaaccaaaagtaagttaagggaccaaatgatgtattaag 42632703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 42633946 - 42634005
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||| |||||||    
T  42633946 atagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaag 42634005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 53808374 - 53808315
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||| ||||||| |||||||    
T  53808374 atagttaggagaccaaattcaaaaccgaaaataagttaagggaccaaatgatgtattaag 53808315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 5416273 - 5416211
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| || ||| ||||||||||||||||| ||||| | ||||||||||||||||||    
T  5416273 gaccaaattgagacattttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 5416211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 8372657 - 8372735
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  ||||||||||||||||| ||| ||| |||||||    
T  8372657 gaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaacgatatattaag 8372735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 10987694 - 10987772
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  ||||||||||||||||  ||||||| |||||||    
T  10987694 gaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggatcaaatgatgtattaag 10987772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 26798947 - 26799025
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| ||||||||||||||||| | |||||  ||||||||||||| ||| ||||||| |||||||    
T  26798947 gaccaaattgagacattttatagttaggggaccaaaataaaaaccaaaaataagttaagagaccaaatgatgtattaag 26799025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 32980493 - 32980571
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  ||  |||||||||||||||||||||||| ||||||||||||| |||  ||||||| |||||||    
T  32980493 gaccaaattgagacactttgtagttaggggaccaaattgaaaacagaaaataagttaatggatcaaatgatatattaag 32980571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 51825662 - 51825740
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || ||||||| ||||||||| ||||| |  ||||||||||||||||| ||||||| |||||||    
T  51825662 gaccaaattgaaacactttatagttaagggaccaaagtgaaatccaaaaataagttaagggaccaaatgatatattaag 51825740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 54752691 - 54752613
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||| ||||||||||   ||||||||||||||||| ||||||| |||||||    
T  54752691 gaccaaattgagacactttatagttaggggactaaattgaaaatgaaaaataagttaagggaccaaatgatgtattaag 54752613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 39133092 - 39133015
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||||||| ||  || |||||||||||||||||||||||||  ||||||||||||| ||  ||||||| ||||||    
T  39133092 gaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaagagatcaaatgatgtattaa 39133015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 52293558 - 52293626
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||| ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  52293558 ataaaggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 52293626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 21247304 - 21247233
Alignment:
Q  277 ttgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||||||||||||||||| ||||||     || ||||||||||||| |||||||| ||||||    
T  21247304 ttgaaacgtttaatagttaggggaccaatttgaaataaagaattaagttaagggaccaaatgatcaattaag 21247233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 25585873 - 25585952
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||||||||||||||| |||||| | ||||||   ||||||| ||||||||| |||| || |||||||    
T  25585873 agaccaaattgagacgtttaatagttagaggaccagagtgaaaataaaaaataaattaagggaccaaataatatattaag 25585952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 1031891 - 1031829
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| ||||||||||| ||||||| | ||| || | |||||||||||||||||    
T  1031891 gaccaaattgaaacatttaatagttaagggaccacactgagaaattaaaataagttaagggac 1031829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 32973214 - 32973152
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  32973214 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 32973152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 32974264 - 32974326
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  32974264 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 32974326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 33000841 - 33000903
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||||| |||| |||| ||| || | ||||||||||| |||||    
T  33000841 gaccaaattgaaacgtttaatagttaagggatcaaactgagaaattaaaataagttaggggac 33000903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 36626806 - 36626728
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || |||||||||  ||||||||| |||  ||||||||||||| |||| ||||||| |||||||    
T  36626806 gaccaaattgaaacacttcatagttaggaaaccaaattgtaaatagaaaataagttaaaggaccaaatgatatattaag 36626728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 48035365 - 48035427
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  48035365 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 48035427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 50150796 - 50150734
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| ||||||||||| | ||||||| ||| || | |||||||||||||||||    
T  50150796 gaccaaattgaaacatttaatagttaagtgaccaaactgagaaattaaaataagttaagggac 50150734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 51401392 - 51401454
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  |||||||||||||||||    
T  51401392 gaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggac 51401454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 53047972 - 53047910
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  53047972 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 53047910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 54654007 - 54654085
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||| ||||||||| ||||| |  ||||||||||||||||| ||||||| |||||||    
T  54654007 gaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 54654085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 2225064 - 2225127
Alignment:
Q  269 agaccaaattgaaac-gtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||| || |||||| ||||||||||||||||||||| |  |||||||||||||||||    
T  2225064 agaccaaattgagacagtttaa-agttaggggaccaaattgaaatccaaaaataagttaagggac 2225127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 18024636 - 18024576
Alignment:
Q  279 gaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    ||||| ||||||||||| ||||||||| ||||| |  ||||||||||||||||| ||||||    
T  18024636 gaaacttttaatagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaatga 18024576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 30385252 - 30385192
Alignment:
Q  279 gaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    ||||| ||||||||||| ||||||||| ||||| |  ||||||||||||||||| ||||||    
T  30385252 gaaacttttaatagttacgggaccaaaatgaaaccaaaaaataagttaagggaccaaatga 30385192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 42592471 - 42592411
Alignment:
Q  279 gaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    ||||| ||||||||||| ||||||||| ||||| |  ||||||||||||||||| ||||||    
T  42592471 gaaacttttaatagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaatga 42592411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 348
Target Start/End: Original strand, 50003258 - 50003342
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||| |||||  |||||||||||||||||||||||||||| | ||||     || ||||||||||||| |||||||| ||||||    
T  50003258 ataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaataaagaattaagttaagggaccaaatgatcaattaag 50003342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 5417108 - 5417151
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||    
T  5417108 atagttaggggaccaaaatgaaatccgaaaataagttaagggac 5417151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 11483047 - 11483090
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  11483047 atagttaagggaccaaaatgaaatctgaaaataagttaagggac 11483090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 39530867 - 39530808
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||||||||| |||| || | ||| || | |||||||||||||||||    
T  39530867 caaattgaaacgtttaatagttaagggatcacactgagaaattaaaataagttaagggac 39530808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 47808146 - 47808225
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || ||||||| || |||||| ||||| |  |||||||||||||||||||| |||| |||||||    
T  47808146 agaccaaattgagacactttatagttaaggaaccaaagtgaaatccaaaaataagttaagggactaagtgatgtattaag 47808225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 49122042 - 49122121
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || ||||||| | ||||||| |||||||  |||||||||||| |||| ||||||| |||||||    
T  49122042 agaccaaattgagacactttatagttaagagaccaaaatgaaaaccaaaaataagttaaaggaccaaatgatatattaag 49122121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 52292650 - 52292607
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||    
T  52292650 atagttaggggaccaaaatgaaatccgaaaataagttaagggac 52292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 329
Target Start/End: Complemental strand, 53342791 - 53342732
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagg 329  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | |||||||||||||||    
T  53342791 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagg 53342732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 11219506 - 11219428
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    |||||||||||| ||  || ||||||||||||||||| ||||| |  |||||||||||| |||| |||  |||||||||    
T  11219506 agaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaacggaccaaagcatctattaa 11219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 12062425 - 12062487
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  |||||||||| ||||||||| ||||||   |||||||||||||||||    
T  12062425 gaccaaattgagacacttaatagttaagggaccaaactgaaaaaataaaataagttaagggac 12062487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 290 - 348
Target Start/End: Complemental strand, 17345366 - 17345308
Alignment:
Q  290 tagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||||  |||||||  ||||||||||||||||| |||| || |||||||    
T  17345366 tagttaggggaccaacctgaaaaccaaaaataagttaagggaccaaataatgtattaag 17345308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 19579335 - 19579397
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||| ||||||||| ||||| | ||||||||||||||||||    
T  19579335 gaccaaattgagacactttatagttaagggaccaaaatgaaatccgaaaataagttaagggac 19579397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 19622061 - 19622003
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||||||||||||| |||||||  ||||||| |||| |||| ||||||| ||||||    
T  19622061 atagttaggggaccaaagtgaaaaccaaaaataacttaaaggaccaaatgatgtattaa 19622003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 36627240 - 36627198
Alignment:
Q  30 gtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    |||||||| |||| |||||||||||||||||| ||||||||||    
T  36627240 gtttgattatgtgatttttgttgaagttgaaatgataaatttt 36627198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 39287545 - 39287483
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || |||||||| |||||||| ||||| | ||||||||||||||||||    
T  39287545 gaccaaattgagacactttatagttagaggaccaaaatgaaatccgaaaataagttaagggac 39287483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 39288480 - 39288538
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaag 328  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||    
T  39288480 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 39288538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 43101969 - 43101899
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    ||||||||||| ||  || ||| |||| |||||||| |||||||  ||||||||||||||||| |||||||    
T  43101969 gaccaaattgagacactttataattagaggaccaaaatgaaaaccaaaaataagttaagggaccaaatgat 43101899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 48867471 - 48867533
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  |||||||||| ||||||||||||| ||   |||||||||||||||||    
T  48867471 gaccaaattgacacacttaatagttaagggaccaaattgagaaaataaaataagttaagggac 48867533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 53049078 - 53049140
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| | ||| | ||||||||||||||||||    
T  53049078 gaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggac 53049140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 54353362 - 54353312
Alignment:
Q  29 tgtttgattttgtgctttttgttgaagttgaaaagataaattttgaaagaa 79  Q
    ||||| ||| |||| |||||||||||||||||| ||||| |||||||||||    
T  54353362 tgtttaattatgtggtttttgttgaagttgaaatgataatttttgaaagaa 54353312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 55442650 - 55442608
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||||||||||||| |||||  ||||||||||||||||||    
T  55442650 atagttaggggaccaaaatgaaatttgaaaataagttaaggga 55442608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 55443591 - 55443653
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| |||||   ||||||||||||||||||    
T  55443591 gaccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 55443653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 17934060 - 17934129
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    |||||||  ||||| ||||||||||| |||||||||   ||| |  ||||||||||||||||||||||||    
T  17934060 gaccaaaacgaaacttttaatagttaagggaccaaaacaaaaccaaaaaataagttaagggactaaatga 17934129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 326
Target Start/End: Original strand, 19253046 - 19253099
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagtta 326  Q
    |||||||| || ||| ||| |||||||||||||||||||||  |||||||||||    
T  19253046 caaattgagacattttataattaggggaccaaattgaaaaccaaaaataagtta 19253099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 32999869 - 32999812
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggg 330  Q
    |||||| |||| ||||||||||| ||||||||| ||| || | |||||||||||||||    
T  32999869 caaattaaaacatttaatagttaagggaccaaactgagaaattaaaataagttaaggg 32999812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 50002601 - 50002552
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatct 206  Q
    |||||||||||||  ||||||| |||| |||||| |||||||||||||||    
T  50002601 tgttggtgatacaccgttagatctgatggatctcctttatccaacgatct 50002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 52705349 - 52705410
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||| |||||    
T  52705349 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttgaggga 52705410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 332
Target Start/End: Complemental strand, 2088965 - 2088855
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaa-gataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaa 319  Q
    |||||||  ||||||| |||||||||||| ||||| ||| || |||||  |||||||||||||| ||||||| ||| |||||| || ||| || | ||||    
T  2088965 ttaaaattaataaaataggaccaaattga-tgatgaaaacaaagataag-gaccaaattgaaacatttaataattaagggacctaactgagaaattaaaa 2088868  T
Q  320 taagttaagggac 332  Q
    ||| |||||||||    
T  2088867 taaattaagggac 2088855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 7583551 - 7583483
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||||||| ||  || |||||||| |||||||| ||||| | ||||||||||||| ||||    
T  7583551 ataagagaccaaattgagacactttatagttagtggaccaaaatgaaatccgaaaataagttaatggac 7583483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 53901647 - 53901583
Alignment:
Q  267 aaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||| |||| ||||||||||| ||||| ||| ||| || | ||||||| ||||||||    
T  53901647 aaagaccaaattaaaacatttaatagttaagggactaaactgagaaattaaaataaattaaggga 53901583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 11080960 - 11081151
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnn-gagtgttaaaatggataaaattggaccaaattgaatgatg 255  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||| | |||||        ||| ||||||||| || |||| ||||||||||||||||||    
T  11080960 tgttggtgatacacagttagatctgatagacctcatttatccaaaggtctccttttttttgag-gttaaaatgaatgaaataggaccaaattgaatgatg 11081058  T
Q  256 gaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||||| |||||||    
T  11081059 gaaagaagataaaggaccaatttggaacgtttaatagttagaggaccaaattgaaaacagaaaataagttaagggatcaaatgatgtattaag 11081151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 221 - 328
Target Start/End: Complemental strand, 42307620 - 42307513
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaat 320  Q
    |||||||| ||||||| || | ||||| |||||||||||||||||||| ||| || ||||||  ||||||||||||||||||||||||||||| ||||||    
T  42307620 ttaaaatgaataaaataggtctaaattaaatgatggaaagaagataaatgactaatttgaaatatttaatagttaggggaccaaattgaaaacagaaaat 42307521  T
Q  321 aagttaag 328  Q
    ||||||||    
T  42307520 aagttaag 42307513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 222 - 347
Target Start/End: Original strand, 42314809 - 42314934
Alignment:
Q  222 taaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaata 321  Q
    ||||||| |||||||  ||||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||||| | |||||||||||  |||||||    
T  42314809 taaaatgaataaaatgagaccaaattgaatgaaggaaagaagataaagaaccaatttgaaacgtttaatagttagggaatcaaattgaaaatagaaaata 42314908  T
Q  322 agttaagggactaaatgatctattaa 347  Q
    | |||||| |  ||||||| ||||||    
T  42314909 aattaaggaatcaaatgatgtattaa 42314934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 31623981 - 31623903
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  31623981 gaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 31623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 16346174 - 16346111
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggact 333  Q
    |||||||||||||||||||||||||| ||||||||| ||| || | ||||||||||||||||||    
T  16346174 gaccaaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggact 16346111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 36756139 - 36756061
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||| ||||||||  || ||||||| ||||||||||| |||||| ||||||||||||||||| ||||||| |||||||    
T  36756139 gaccagattgaaacactttatagttatgggaccaaattaaaaactaaaaataagttaagggaccaaatgatgtattaag 36756061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 339
Target Start/End: Original strand, 37324728 - 37324798
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    |||||||||||| || ||| ||||||||||||||||||| |||||  |||||||||||||||| |||||||    
T  37324728 agaccaaattgagacattttatagttaggggaccaaattaaaaaccaaaaataagttaagggattaaatga 37324798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 38591048 - 38591126
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||||||||||   ||||||||||||||||| ||||||| |||||||    
T  38591048 gaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatgatgtattaag 38591126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 41867957 - 41868035
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||| ||||||| ||||||||| ||||||| |||||||    
T  41867957 gaccaaattgagacactttatagttaggggaccaaagtgaaaactaaaaataaattaagggaccaaatgatgtattaag 41868035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 43386743 - 43386821
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| ||||||||||||||||| |||||||  ||||||||||||||||| | ||||| |||||||    
T  43386743 gaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaag 43386821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 36940075 - 36940152
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||  || |||||||||||| |||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  36940075 accaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaag 36940152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 38790296 - 38790372
Alignment:
Q  272 ccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||| ||||||||||||||||| |||||| ||||||  |||||||||||||||||  || |||| |||||||    
T  38790296 ccaaattgagacgtttaatagttagggaaccaaaatgaaaaacgaaaataagttaagggatcaactgatgtattaag 38790372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 39244 - 39310
Alignment:
Q  270 gaccaaattgaaac-gtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaa 336  Q
    |||||||||||||| |||||| ||||||||||||||||||||| || | |||||||||||||||||||    
T  39244 gaccaaattgaaacagtttaa-agttaggggaccaaattgaaatctaataataagttaagggactaaa 39310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 10053804 - 10053863
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| ||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  10053804 atagttaagggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaag 10053863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 37323420 - 37323345
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| || ||| |||||||||| ||||||||||||||  ||||||| ||||||||| ||||||| |||||||    
T  37323420 caaattgagacattttatagttagggaaccaaattgaaaaccaaaaataaattaagggaccaaatgatgtattaag 37323345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 12818829 - 12818767
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||| |||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  12818829 gaccaaattgaaatgtttaatagttaagggaccaaactgagaaattaaaataagttaagggac 12818767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 43277962 - 43278040
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| ||||||||||||||||||| ||||   ||||||||||||||||  ||||||| |||||||    
T  43277962 gaccaaattgagacattttatagttaggggaccaaattaaaaataaaaaataagttaagggatcaaatgatatattaag 43278040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 42307815 - 42307763
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||| ||||||    
T  42307815 aaatttaaatgtttgattatgtggtttttgttgaagttgaaatgatgaatttt 42307763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 117120 - 117045
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||| ||| ||||||||||||| |||||||  ||||||||||||||||  ||| ||| |||||||    
T  117120 caaattgaaacattttataattaggggaccaaaatgaaaaccaaaaataagttaagggatcaaacgatgtattaag 117045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 162640 - 162703
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||| |||||| ||||||||||| |||||||||  |||| || |||||||||||||||||    
T  162640 agaccaaaatgaaacttttaatagttaagggaccaaaacgaaacctaaaaataagttaagggac 162703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 22914234 - 22914293
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||  ||| |||| |||||| | |||||||||||||||||    
T  22914234 caaattgaaacgtttaatagttaatggatcaaactgaaaaattaaaataagttaagggac 22914293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 36070234 - 36070175
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||||||||||||||  ||||||| ||||||||  ||||||| |||||||    
T  36070234 atagttaggggaccaaattgaaaaccaaaaataaattaagggatcaaatgatgtattaag 36070175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 36071438 - 36071497
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| |||||||||||||||||  || |||||||||| ||||||||||| |||||||    
T  36071438 atagttaagggaccaaattgaaaacaaaatataagttaagagactaaatgatgtattaag 36071497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 38589876 - 38589818
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  38589876 atagttagaggaccaaattgaaaaca-aaaataagttaagggaccaaatgatgtattaag 38589818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 43275806 - 43275747
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||| ||||||||||||||  ||||||||||||| ||| ||||||| |||||||    
T  43275806 atagttagggaaccaaattgaaaacaaaaaataagttaagagaccaaatgatgtattaag 43275747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 348
Target Start/End: Complemental strand, 43414496 - 43414378
Alignment:
Q  230 ataaaattggaccaaattgaatgatggaaaga-agataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaag 328  Q
    ||||||| | |||||||||| ||||| ||| | ||||||| |||||  |||||||||||||||||||||||||||| | |||||    ||  ||||||||    
T  43414496 ataaaatagtaccaaattga-tgatgaaaacatagataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaaaaaagaataaagttaag 43414398  T
Q  329 ggactaaatgatctattaag 348  Q
    |||| |||||||| ||||||    
T  43414397 ggaccaaatgatcaattaag 43414378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 43416000 - 43416087
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  ||||||||||||||||||| |||||||| | |||||    || ||||||||||||| || ||||| ||||||    
T  43416000 aagataaaagaccattttgaaacgtttaatagttaagggaccaattcgaaaaaaagaattaagttaagggaccaattgatcaattaag 43416087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 9189469 - 9189407
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||||| ||||||| | ||| || | ||||||| |||||||||    
T  9189469 gaccaaattgaaacgtttaatagttaagggaccacactgagaaattaaaataaattaagggac 9189407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 24068405 - 24068343
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  |||||||||||||||||    
T  24068405 gaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggac 24068343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 29739684 - 29739762
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||| ||||||||||||  ||||||| ||||| ||| ||||||| |||||||    
T  29739684 gaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataaattaagagaccaaatgatgtattaag 29739762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 35462910 - 35462968
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctcc 208  Q
    |||||| |||||||||||||  |||||||  |||||| |||||||||||||||||||||    
T  35462910 aattaggtgttggtgatacactgttagatcagatagacctcatttatccaacgatctcc 35462968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 37472478 - 37472400
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||| |||||||||| |||||  |||||||||||| |||| ||||||| |||||||    
T  37472478 gaccaaattgagacactttatagttagaggaccaaattaaaaaccaaaaataagttaaaggacgaaatgatgtattaag 37472400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 37474077 - 37474155
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||| |||||||||||||||||   |||||||||||||||  ||||||| |||||||    
T  37474077 gaccaaattgagacactttatagttaagggaccaaattgaaaaccataaataagttaagggatgaaatgatgtattaag 37474155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 19913567 - 19913490
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||||||||||  || |||||||| ||||||||||||||    ||||||||||||||||| ||| ||| ||||||    
T  19913567 gaccaaattgaaacactttatagttagaggaccaaattgaaattcaaaaataagttaagggaccaaaggatgtattaa 19913490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 11080808 - 11080860
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  11080808 aaatttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 11080860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 38061 - 37982
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||| ||||  || ||||||||||||| ||| | |||||  ||||||||||||||||| ||| ||| |||||||    
T  38061 agaccaaattcaaacactttatagttaggggactaaaattaaaacaaaaaataagttaagggaccaaacgatgtattaag 37982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 4534109 - 4534046
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggact 333  Q
    |||||||||||||| ||||||| |||  |||||||| ||| || | ||||||||||||||||||    
T  4534109 gaccaaattgaaacatttaatatttaaaggaccaaactgagaaattaaaataagttaagggact 4534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 9190483 - 9190542
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagg 329  Q
    |||||||||||||| ||||||||||| ||||| ||| ||| || | ||||||||||||||    
T  9190483 gaccaaattgaaacatttaatagttaagggactaaactgagaaattaaaataagttaagg 9190542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 16363872 - 16363931
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| |||||||| |||||||  ||||||||||||||||| |||| || |||||||    
T  16363872 atagttagaggaccaaagtgaaaaccaaaaataagttaagggaccaaattatatattaag 16363931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 16497150 - 16497115
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaag 55  Q
    ||||||||||||||||||||||| ||||||||||||    
T  16497150 aaatttaaatgtttgattttgtggtttttgttgaag 16497115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 31625425 - 31625484
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagg 329  Q
    ||||||||||| ||  || ||| |||||||||||||||||||||  ||||||||||||||    
T  31625425 gaccaaattgagacactttataattaggggaccaaattgaaaaccaaaaataagttaagg 31625484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 39325875 - 39325950
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatt 345  Q
    |||||| || ||||||||  |||||||||||| ||| ||| ||| |||||||||||||||||| ||| ||| ||||    
T  39325875 gaccaatttaaaacgttttttagttaggggactaaaatgagaacagaaaataagttaagggaccaaacgatatatt 39325950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 39544986 - 39544927
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| | ||||| | ||||||| |||||||||||||||||| ||||||| |||||||    
T  39544986 atagttaagcgaccagagtgaaaacagaaaataagttaagggaccaaatgatgtattaag 39544927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 12820139 - 12820201
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||| |||||||||||||||| |||||| || ||| || | |||||||||| ||||||    
T  12820139 gaccaaattaaaacgtttaatagttaagggaccgaactgagaaattaaaataagtttagggac 12820201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 21524635 - 21524697
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||| |||||| ||||||||||| |||||||||  |||| |  |||||||||||||||||    
T  21524635 gaccaaaatgaaacttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggac 21524697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 35945478 - 35945556
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| ||| || ||| ||||||| ||||| ||| |||||||  ||||||||||||||||| |||| || |||||||    
T  35945478 gaccaaagtgagacattttatagttaagggactaaaatgaaaacaaaaaataagttaagggaccaaataatgtattaag 35945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 39546718 - 39546796
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || | |||||||| |||||| ||||||| ||||||||||||||| || ||| ||| |||||||    
T  39546718 gaccaaattgagacactttaaagttagggaaccaaagtgaaaacagaaaataagttaaggaacaaaaggatgtattaag 39546796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 41866969 - 41866891
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || ||||||| |||| |||| ||||||   ||||||||||||||||| ||||| | |||||||    
T  41866969 gaccaaattgaaacactttatagttaagggatcaaagtgaaaatcaaaaataagttaagggaccaaatggtgtattaag 41866891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 3237702 - 3237759
Alignment:
Q  291 agttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||| ||||| |  ||||||||||||||||| ||||||| |||||||    
T  3237702 agttaggggactaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 3237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 6843830 - 6843769
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||||||| ||  || ||||||||||||||||| | ||| | |||||||||||||||||    
T  6843830 gaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaaggga 6843769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 10398676 - 10398745
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    ||||||| | |||| ||||||||||| |||||||||  |||| |  ||||||||||||||||| ||||||    
T  10398676 gaccaaaataaaacttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatga 10398745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 14820249 - 14820192
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatta 346  Q
    ||||||||||||||||||| ||| |  ||||||||||||||||| || |||| |||||    
T  14820249 atagttaggggaccaaattaaaatccaaaaataagttaagggaccaattgatgtatta 14820192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 20066158 - 20066118
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    |||||||||||||||||||||||||| |||||  |||||||    
T  20066158 ataaaagaccaaattgaaacgtttaaaagttataggaccaa 20066118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 305
Target Start/End: Original strand, 36757270 - 36757306
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaa 305  Q
    |||||||||||| |||||| |||||||||||||||||    
T  36757270 agaccaaattgagacgttttatagttaggggaccaaa 36757306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 39323868 - 39323784
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||| ||| ||| |||| ||||||  |||||||| ||| ||| ||| ||  ||||||||||||||||| |||||||| |||||||    
T  39323868 ataagagatcaatttgagacgttttttagttaggagactaaaatgagaatagaaaataagttaagggattaaatgatatattaag 39323784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 221 - 348
Target Start/End: Original strand, 683532 - 683659
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaat 320  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  683532 ttaaaatgaataaaatgggaccaaattgaatgaaggaaagaagataaaagaccaatttgaaacgtttaataggtaggggaccaaattgaaaacagaaaat 683631  T
Q  321 aagttaagggactaaatgatctattaag 348  Q
    ||||||| |||| ||||||| |||||||    
T  683632 aagttaaaggaccaaatgatatattaag 683659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 157 - 347
Target Start/End: Complemental strand, 682453 - 682263
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| || ||||| ||||||| ||||||||||||||| |||||       | |  |||||||| |||||||  ||||||||||||||||||    
T  682453 tgttggtgatacacagctagatctgatagacctcatttatccaacggtctcctttttttgtggattaaaatgaataaaataagaccaaattgaatgatgg 682354  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    |||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||||||| || ||| ||| ||||||    
T  682353 aaagaagataaatgaccaatttggaacgtttaatagttagaggaccaaattgaaaacagaaaataagttaaggaaccaaacgatgtattaa 682263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 9665466 - 9665514
Alignment:
Q  357 taactattttgacaacacaaaacgacggttatacaattttatttttcta 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9665466 taactattttgacaacacaaaacgacggttatacaattttatttttcta 9665514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 31738438 - 31738360
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||| ||| |||||||    
T  31738438 gaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaaggatgtattaag 31738360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 8411163 - 8411083
Alignment:
Q  268 aagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||| ||  || ||||||||||||| |||||||||||  |||||||||||||| |||||||||| |||||||    
T  8411163 aagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaaggaactaaatgatgtattaag 8411083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 1757535 - 1757597
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  1757535 gaccaaattgaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggac 1757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 5311354 - 5311276
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||| |||||||||||  ||||||||||||||||| ||||||| |||||||    
T  5311354 gaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 5311276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 33802077 - 33802136
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  33802077 atagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatgatgtattaag 33802136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 8412357 - 8412435
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||||||||| |||||||||||  ||||||||||||||||| |||| || |||||||    
T  8412357 gaccaaattgagacactttatagttaggggactaaattgaaaacaaaaaataagttaagggaccaaataatgtattaag 8412435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 8447296 - 8447230
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaa 336  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  8447296 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggactaaa 8447230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 8456100 - 8456034
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaa 336  Q
    ||||||||||| ||  || ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  8456100 gaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggactaaa 8456034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 487 - 528
Target Start/End: Original strand, 9665829 - 9665870
Alignment:
Q  487 gatgaagattcccagaaaatcgggtagtagcaatggtgattc 528  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  9665829 gatgaagattcccagaaaatcgagtagtagcaatggtgattc 9665870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 27108217 - 27108293
Alignment:
Q  272 ccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| |||||||||||||||| ||||||||| ||| || | |||||||||||||||||  |  |||||||||||    
T  27108217 ccaaattaaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgagagatctattaag 27108293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 27150014 - 27150090
Alignment:
Q  272 ccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||| |||||||||||||||| ||||||||| ||| || | |||||||||||||||||  |  |||||||||||    
T  27150014 ccaaattaaaacgtttaatagttaagggaccaaactgagaaattaaaataagttaagggaccgagagatctattaag 27150090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 18139547 - 18139606
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| ||| |||| ||||||| |||||||||||||||||| ||||||| |||||||    
T  18139547 atagttagaggatcaaagtgaaaacggaaaataagttaagggaccaaatgatgtattaag 18139606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 1692152 - 1692086
Alignment:
Q  267 aaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggact 333  Q
    |||||| |||||||||| ||||||||||| | ||||||| |||||| | ||||||| ||||||||||    
T  1692152 aaagactaaattgaaacatttaatagttaagagaccaaactgaaaaattaaaataaattaagggact 1692086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 1693022 - 1693079
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaa 327  Q
    ||||||||| ||| |||||||||||| ||||||||| |||||| | ||||||||||||    
T  1693022 gaccaaattaaaatgtttaatagttaagggaccaaactgaaaaattaaaataagttaa 1693079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 11724337 - 11724398
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||||||||||||||||| | ||||| |  ||||| | ||||||||||||||||    
T  11724337 gaccaaattgaaacgtttaatagttaagtgaccacaccgaaaaattaaaataagttaaggga 11724398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 22299944 - 22300005
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||||||| ||  || ||||||||||||||||| |||||||  ||||||||||||||||    
T  22299944 gaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaaggga 22300005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 682595 - 682543
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  682595 aaatttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 682543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 9899631 - 9899571
Alignment:
Q  279 gaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    ||||| ||||||||||| ||||||||| ||||| |  ||||||||||||||||| ||||||    
T  9899631 gaaacttttaatagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaatga 9899571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 13173118 - 13173050
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||||||| ||  || ||||||||||||||||| | ||| | ||||||||||||||||||    
T  13173118 ataagagaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggac 13173050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 19368553 - 19368621
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||||||| ||  || |||||||| |||||||| ||||| | ||||||||||||||||||    
T  19368553 ataagagaccaaattgagacactttatagttagaggaccaaaatgaaatccgaaaataagttaagggac 19368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 304
Target Start/End: Original strand, 25439099 - 25439182
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaa-gataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    |||||||  |||||||||||||||||||| | ||| ||| || ||||||||||||||||||||||||| ||| |||  |||||||    
T  25439099 ttaaaattaataaaattggaccaaattga-taatgaaaacaaagataaaagaccaaattgaaacgttttataattaaaggaccaa 25439182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 30860319 - 30860379
Alignment:
Q  279 gaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    ||||| ||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||||    
T  30860319 gaaacttttaatagttaagggaccaaaatgaaatcaaaaaataagttaagggactgaatga 30860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 13176368 - 13176451
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    ||||||||||||||||| || ||| ||||||||||||| ||| | ||| | |||||| | ||||||||| |||| || ||||||    
T  13176368 ataaaagaccaaattgagacattttatagttaggggactaaaataaaatccgaaaatgaattaagggaccaaatcatgtattaa 13176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 13562328 - 13562379
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaa 312  Q
    |||||||| |||||  ||||||||||||||||||| |||||||| |||||||    
T  13562328 aagataaaggaccattttgaaacgtttaatagttaagggaccaatttgaaaa 13562379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 18230406 - 18230363
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||    
T  18230406 aagataaaggaccaaattaaaacgtttaatggttaggggaccaa 18230363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 24318096 - 24318183
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||| ||||||||| ||| |||||||| ||| |||||||| | |||||    || ||||||||||||| |||||||| ||||||    
T  24318096 aagataaaggaccaaattaaaaagtttaataattaagggaccaattcgaaaaaaagaattaagttaagggaccaaatgatcaattaag 24318183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 9927681 - 9927619
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| | |||||  |||||||||||||||||    
T  9927681 gaccaaattgagacactttatagttaggggaccaaactaaaaacaaaaaataagttaagggac 9927619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 14174175 - 14174121
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaa 327  Q
    |||||||||| ||||||||||||| |||||||| ||| || | ||||||||||||    
T  14174175 caaattgaaaagtttaatagttagtggaccaaactgagaaattaaaataagttaa 14174121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 14178711 - 14178657
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaa 327  Q
    |||||||||| ||||||||||||| |||||||| ||| || | ||||||||||||    
T  14178711 caaattgaaaagtttaatagttagtggaccaaactgagaaattaaaataagttaa 14178657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 18498311 - 18498261
Alignment:
Q  22 atttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  18498311 atttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 18498261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 19048324 - 19048262
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||  ||||| ||||||||||| ||||||||| ||||| |  |||||||||||||||||    
T  19048324 gaccaaaacgaaacttttaatagttaagggaccaaaatgaaaccaaaaaataagttaagggac 19048262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 19367792 - 19367730
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| |||||   ||||||||||||||||||    
T  19367792 gaccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 19367730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 24317133 - 24317099
Alignment:
Q  261 aagataaaagaccaaattgaaacgtttaatagtta 295  Q
    |||||||| ||||||||||||||||||||||||||    
T  24317133 aagataaatgaccaaattgaaacgtttaatagtta 24317099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 28225499 - 28225437
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| |||||   ||||||||||||||||||    
T  28225499 gaccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 28225437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 31740313 - 31740375
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||| |||||||||||||||||  |||||||||||| ||||    
T  31740313 gaccaaattgagacactttatagttaagggaccaaattgaaaacaaaaaataagttaaaggac 31740375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 18773729 - 18773668
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||||||| || ||| ||| ||||||||||||| ||||| |  ||||||||||||||||    
T  18773729 gaccaaattgagacattttataattaggggaccaaaatgaaatccaaaaataagttaaggga 18773668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 26584079 - 26584140
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||| ||  || ||||||||||||||||| | ||| | ||||||||||||||||||    
T  26584079 accaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggac 26584140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Complemental strand, 30860000 - 30859931
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    |||||||  ||||| ||||||||||| |||||||||  |||| |  ||||||||||||||||| ||||||    
T  30860000 gaccaaaacgaaacttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatga 30859931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 10673690 - 10673650
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    ||||| ||||||||||||||||||| |||||| ||||||||    
T  10673690 ataaaggaccaaattgaaacgtttattagttaagggaccaa 10673650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 25437861 - 25437833
Alignment:
Q  267 aaagaccaaattgaaacgtttaatagtta 295  Q
    |||||||||||||||||||||||||||||    
T  25437861 aaagaccaaattgaaacgtttaatagtta 25437833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 145 - 311
Target Start/End: Complemental strand, 20921711 - 20921544
Alignment:
Q  145 aaaataattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnng-agtgttaaaatggataaaattggacca 243  Q
    ||||||||||| ||||||||||| | |||||||| ||||||| ||||||||||||||  |||||         || ||||||||| ||||||| ||||||    
T  20921711 aaaataattaggtgttggtgatatacagttagatatgatagacctcatttatccaacagtctcctttttttttagggttaaaatgaataaaataggacca 20921612  T
Q  244 aattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaa 311  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||| ||||||    
T  20921611 aattgaatgatggaaagaagatcaaggaccaatttgaaacgtttaatatttaggggaccaatttgaaa 20921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 157 - 329
Target Start/End: Complemental strand, 12364378 - 12364206
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||| | || ||       | | ||||||||  || |||| ||||||||||||| ||  |    
T  12364378 tgttggtgatacacagttagatctgatagacctcatttatccaatggtcccctttttttgggggttaaaataaattaaataggaccaaattgaaggactg 12364279  T
Q  257 aaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagg 329  Q
    |||||||||||| |||||| || |||||||||||||||||  || |||||| ||||| |||||||| ||||||    
T  12364278 aaagaagataaatgaccaatttaaaacgtttaatagttagatgatcaaattaaaaacagaaaataaattaagg 12364206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 157 - 279
Target Start/End: Original strand, 12365946 - 12366066
Alignment:
Q  157 tgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatgg 256  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||| |||||       | | ||||||||| ||||||| |||||||||||||||||||    
T  12365946 tgttggtgatacacagttatatctgatagatctcatttatccaacggtctccatttt--gggggttaaaatgaataaaataggaccaaattgaatgatgg 12366043  T
Q  257 aaagaagataaaagaccaaattg 279  Q
    |||||| ||||| ||||| ||||    
T  12366044 aaagaatataaaggaccagattg 12366066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 20921556 - 20921478
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||| ||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||| ||||||| |||||||    
T  20921556 gaccaatttgaaacgtttaatatttaggggaccaaattgaaaattgaaaataaattaaaggaccaaatgatatattaag 20921478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 42596635 - 42596557
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| |||||||||||||||||||||||| | ||||  |||||||||||||||||| ||||||| |||||||    
T  42596635 gaccaaattgagacgtttaatagttaggggaccaaaataaaaaacgaaaataagttaagggaccaaatgatgtattaag 42596557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 37867831 - 37867753
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||| ||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  37867831 gaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagttaagggaccaaatgatgtattaag 37867753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 33553406 - 33553467
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    |||||||||||||||||||||||||| | ||||||| |||||| | ||||||||||||||||    
T  33553406 gaccaaattgaaacgtttaatagttaagagaccaaactgaaaaattaaaataagttaaggga 33553467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 3255913 - 3255981
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||||||||||  || ||||||||||||||||| ||||| | ||||||||||||||||||    
T  3255913 ataagagaccaaattgaaacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 3255981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 4630119 - 4630187
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||| |||||||||||| ||  || ||||||||||||||||| ||||| ||||||||||||||||||||    
T  4630119 ataagagaccaaattgagacactttatagttaggggaccaaaatgaaatctgaaaataagttaagggac 4630187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 23178942 - 23178993
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  23178942 atagttaggggaccaaagtgaaaactaaaaataagttaagggaccaaatgat 23178993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 23590199 - 23590250
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  23590199 atagttaggggaccaaagtgaaaactaaaaataagttaagggaccaaatgat 23590250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 35799588 - 35799509
Alignment:
Q  269 agaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||| ||  || ||||||||||||| |||||||||||  ||||||||||||||||  ||||||| |||||||    
T  35799588 agaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggatgaaatgatgtattaag 35799509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 1257613 - 1257507
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaat 320  Q
    |||||||| ||||||| | |||| || |||| ||| |||||||||||| || ||| || ||| |||||||||| | ||||  ||||||||||| ||||||    
T  1257613 ttaaaatgaataaaatagaaccacatcgaataatgaaaagaagataaatgatcaatttaaaatgtttaatagtcaagggataaaattgaaaaccgaaaat 1257514  T
Q  321 aagttaa 327  Q
    |||||||    
T  1257513 aagttaa 1257507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 3665299 - 3665237
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||| ||| |||||||| |||||||| ||||| | ||||||||||||||||||    
T  3665299 gaccaaattgaaacattttatagttagaggaccaaaatgaaatccgaaaataagttaagggac 3665237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 11575500 - 11575574
Alignment:
Q  274 aaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||| ||| ||||||||||||||||| | |||||  |||||||||||| |||| ||||||| |||||||    
T  11575500 aaattgaaacattttatagttaggggaccaaaattaaaaccaaaaataagttaatggaccaaatgatgtattaag 11575574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 41795993 - 41796071
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || |||||||||||| |||| ||||||   ||||||||||||||||||||||||| |||||||    
T  41795993 gaccaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagggactaaatgatgtattaag 41796071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 312
Target Start/End: Original strand, 371959 - 372050
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaa-gataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaa 312  Q
    |||||||  ||||||| ||| |||||||| ||||| ||| || |||||| || ||||||||||||||||||||||||||||| || |||||||    
T  371959 ttaaaattaataaaataggatcaaattga-tgatgaaaacaaagataaaggatcaaattgaaacgtttaatagttaggggactaatttgaaaa 372050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 370964 - 370910
Alignment:
Q  148 ataattagatgttggtgatacatagttagatttgatagatctcatttatccaacg 202  Q
    |||||||| |||||||||||||   |||||||||||||| |||||||||||||||    
T  370964 ataattaggtgttggtgatacaccattagatttgatagacctcatttatccaacg 370910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 7038373 - 7038451
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||||||| ||||||||| ||||| |  ||||||||||||||||| ||||||| |||||||    
T  7038373 gaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaag 7038451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 33836850 - 33836785
Alignment:
Q  264 ataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagg 329  Q
    ||||| ||||||||||| ||  || ||||||||||||||||| ||||| | |||||||||||||||    
T  33836850 ataaatgaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagg 33836785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 339
Target Start/End: Complemental strand, 39110152 - 39110083
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    |||||||  ||||| ||||||||||| ||||||||| ||||| |  ||||||||||||||||| ||||||    
T  39110152 gaccaaaacgaaacttttaatagttaagggaccaaaatgaaaccaaaaaataagttaagggaccaaatga 39110083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 345
Target Start/End: Complemental strand, 2581878 - 2581803
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatt 345  Q
    ||||||||||| ||  || |||||||||||| ||||||||||||  |||||||||||  |||| ||||||| ||||    
T  2581878 gaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagttagaggaccaaatgatgtatt 2581803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 3666309 - 3666376
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaat 337  Q
    ||||||||||| ||  || ||||||| ||||||||| ||||| | |||||||||||||||||| ||||    
T  3666309 gaccaaattgagacactttatagttatgggaccaaaatgaaatccgaaaataagttaagggaccaaat 3666376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 32614441 - 32614382
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| ||||||   |||||||| |||||||| ||||||| |||||||    
T  32614441 atagttaggggaccaaaatgaaaaaataaaataagctaagggaccaaatgatatattaag 32614382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 332
Target Start/End: Original strand, 33837815 - 33837858
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||    
T  33837815 atagttaggggaccaaaataaaatctgaaaataagttaagggac 33837858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 348
Target Start/End: Complemental strand, 35061334 - 35061271
Alignment:
Q  285 tttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||| |||||| ||||||||| |||||||||||||| | ||| |||| ||||||| ||||||||    
T  35061334 tttattagttatgggaccaaaatgaaaactgaaaattaattaggggattaaatgacctattaag 35061271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 7037041 - 7036963
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || ||||||| ||||| ||| ||||| |  |||||||||||| |||| ||||||| |||||||    
T  7037041 gaccaaattgaaacactttatagttaagggactaaagtgaaatccaaaaataagttaaaggaccaaatgatgtattaag 7036963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 10368445 - 10368503
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaa 347  Q
    |||||||||||| |||||||||||   ||||||| ||||||||| ||||||| ||||||    
T  10368445 atagttaggggatcaaattgaaaatcaaaaataaattaagggaccaaatgatgtattaa 10368503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 11386696 - 11386642
Alignment:
Q  273 caaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaa 327  Q
    |||||||||||  || ||||||| ||||||||||| |||||| ||||||||||||    
T  11386696 caaattgaaacactttatagttaagggaccaaattaaaaactaaaaataagttaa 11386642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 12854145 - 12854207
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||| ||||||||| ||||| || |||||||||||||||||    
T  12854145 gaccaaattgagacactttatagttaagggaccaaaatgaaatctaaaaataagttaagggac 12854207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 20630712 - 20630774
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||||||| ||||  ||| ||| || | |||||||||| ||||||    
T  20630712 gaccaaattgaaacgtttaatagttaagggattaaactgagaaattaaaataagtttagggac 20630774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 29424653 - 29424715
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||  || ||||||||||||||||  | |||||  |||||||||||||||||    
T  29424653 gaccaaattgaaacactttatagttaggggaccaatgtaaaaaccaaaaataagttaagggac 29424715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 39272251 - 39272309
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaag 328  Q
    ||||||||| ||||||||||||||||  |||||||| |||||| |  ||||||||||||    
T  39272251 gaccaaattaaaacgtttaatagttaaaggaccaaactgaaaaatttaaataagttaag 39272309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 42027268 - 42027190
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || |||  ||||||| |||||||| ||||||   ||||||||||||||||| ||| ||| |||||||    
T  42027268 gaccaaattgagacattttgtagttagaggaccaaaatgaaaatcaaaaataagttaagggaccaaacgatgtattaag 42027190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 6707000 - 6706939
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||| ||  || ||||||||||||||||| ||||| |  |||||||||||||||||    
T  6707000 accaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagggac 6706939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 28109939 - 28109988
Alignment:
Q  299 gaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||||  ||||||||||||||||| |||| || |||||||    
T  28109939 gaccaaattgaaaacgaaaaataagttaagggaccaaatcatatattaag 28109988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 30202945 - 30202986
Alignment:
Q  291 agttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  30202945 agttaggggaccaaattgaaatccaaaaataagttaagggac 30202986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 36099364 - 36099304
Alignment:
Q  279 gaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatga 339  Q
    ||||| ||||||||||| |||||||||  |||| |  ||||||||||||||||| ||||||    
T  36099364 gaaacttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatga 36099304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 332
Target Start/End: Original strand, 98634 - 98784
Alignment:
Q  182 atagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaa 281  Q
    ||||| |||||||||| |||| |||||       ||| |||||| || ||||||| |||||||||||||||||||||||||||||||  ||||| ||  |    
T  98634 atagacctcatttatcgaacggtctccttcttttgagggttaaactgaataaaataggaccaaattgaatgatggaaagaagataaagaaccaatttaga 98733  T
Q  282 acgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  98734 acgtttaatagtcagaggaccaaattgaaaactgaaaataagttaagggac 98784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 98174 - 98046
Alignment:
Q  220 gttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaa 319  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||||| |||||| ||  ||||||||||||| | |  | ||||||||||||||||||    
T  98174 gttaaaatgaataaaataggaccaaattgaatgatgaaaagaagataaaggaccaatttagaacgtttaatagtaaagacatcaaattgaaaactgaaaa 98075  T
Q  320 taagttaagggactaaatgatctattaag 348  Q
    ||||||||||||  ||||||| |||||||    
T  98074 taagttaagggatcaaatgatgtattaag 98046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 98379 - 98318
Alignment:
Q  20 aaatttaaatgtttgattttgtgctttttgttgaagttgaaaagat-aaattttgaaagaat 80  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||| || ||||||||||||    
T  98379 aaatttaaatgtttaattttgtggtttttgttgaagttgaaatgatgaatttttgaaagaat 98318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 70; Significance: 3e-31; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 150 - 348
Target Start/End: Complemental strand, 35557 - 35360
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtgttaaaatggataaaattggaccaaattga 249  Q
    |||||| ||||||||||||| |||||||| ||||| | ||||||||||||| | |||||       | ||||||||||| |||||||  |||||| ||||    
T  35557 aattaggtgttggtgatacacagttagatctgataaacctcatttatccaatggtctcctttttatgggtgttaaaatgaataaaatatgaccaa-ttga 35459  T
Q  250 atgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    || ||||||||||||||||  ||||| || ||||||||||||||||| ||||||||||  |||  ||||||||| |||||||  ||||||| |||||||    
T  35458 ataatggaaagaagataaagaaccaatttaaaacgtttaatagttagaggaccaaattataaatagaaaataaggtaagggaacaaatgatatattaag 35360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 36735 - 36845
Alignment:
Q  218 gtgttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaa 317  Q
    ||||||||||  |||||||   ||||||||||||||||||||||||||||||||| || ||||||| |||||||| || | ||||||||||||||| |||    
T  36735 gtgttaaaattaataaaataacaccaaattgaatgatggaaagaagataaaagactaatttgaaacatttaataggtaagagaccaaattgaaaacagaa 36834  T
Q  318 aataagttaag 328  Q
    |||||||||||    
T  36835 aataagttaag 36845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 36644 - 36685
Alignment:
Q  161 ggtgatacatagttagatttgatagatctcatttatccaacg 202  Q
    ||||||||| |||||||| ||||||| |||||||||||||||    
T  36644 ggtgatacacagttagatctgatagacctcatttatccaacg 36685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 691 - 608
Alignment:
Q  221 ttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaa 304  Q
    ||||||| ||| |||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||  ||| ||||||||    
T  691 ttaaaattgattaaataggaccaaattgaatgatggaaacaatataaaggaccaaattgaaacgtttaatgattaagggaccaa 608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 1115 - 1207
Alignment:
Q  220 gttaaaatggataaaattggaccaaattgaatgatggaaagaagataaaagaccaaattgaaacgtttaatagttaggggaccaaattgaaaa 312  Q
    |||||||| ||| |||| |||||||||||||||||| ||| |||||||| | |||||||||||| |||||  |||| |||||||| |||||||    
T  1115 gttaaaattgatgaaataggaccaaattgaatgatgaaaataagataaagggccaaattgaaacatttaacggttaagggaccaatttgaaaa 1207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 85117 - 85179
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||| |||||||||| ||||||| | ||| || | |||||||||||||||||    
T  85117 gaccaaattgaaacggttaatagttaagggaccacactgagaaattaaaataagttaagggac 85179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 270 - 345
Target Start/End: Original strand, 77222 - 77297
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatt 345  Q
    ||||||||||||||| || ||||||||| ||||||| |||||||  ||||||||||||| ||||||||||| ||||    
T  77222 gaccaaattgaaacgctttatagttaggagaccaaagtgaaaacaaaaaataagttaagagactaaatgatgtatt 77297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 23481 - 23403
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| || ||| ||||||||||||||||| |||||||  ||||||||||||||||| | ||||| |||||||    
T  23481 gaccaaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaagggaccatatgatgtattaag 23403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 24856 - 24934
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||  || ||| ||||||||||||| |||||||  ||||||| ||||||||| ||| ||| |||||||    
T  24856 gaccaaattgaaacactttataattaggggaccaaactgaaaaccaaaaataaattaagggaccaaacgatgtattaag 24934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 348
Target Start/End: Original strand, 73049 - 73105
Alignment:
Q  292 gttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  73049 gttaggggaccaaagtgaaaaccaaaaataagttaagggactaaatgatgtattaag 73105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 96216 - 96157
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||||||    
T  96216 atagttaggggaccaaattgaaaatcgaaaataagttaatggaccaaatgatgtattaag 96157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 96856 - 96934
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || || ||||||||| ||||||||||||  ||||||||||||||||  ||||||| |||||||    
T  96856 gaccaaattgagacagtttattgttaggggatcaaattgaaaaccaaaaataagttaagggatcaaatgatgtattaag 96934  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 205593 - 205655
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    |||||||||||||||||||||| ||| ||||||||| ||| || | |||||||||||||||||    
T  205593 gaccaaattgaaacgtttaataattaagggaccaaactgagaaattaaaataagttaagggac 205655  T

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Target: scaffold1337 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1337
Description:

Target: scaffold1337; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 295
Target Start/End: Complemental strand, 428 - 282
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctccnnnnnnngagtg-ttaaaatggataaaattggaccaaattg 248  Q
    |||||| |||||||||||||  ||||||| ||| ||||||||||||||||||| || |         || | |||||||  || |||| |||||||||||    
T  428 aattaggtgttggtgatacacggttagatatgacagatctcatttatccaacggtcacatttttttaagagattaaaattaatgaaataggaccaaattg 329  T
Q  249 aatgatggaaagaagataaaagaccaaattgaaacgtttaatagtta 295  Q
    ||||||||||| |||| ||| || ||||||||| ||||| |||||||    
T  328 aatgatggaaacaagaaaaaggatcaaattgaagcgtttgatagtta 282  T

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Target: scaffold1974 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 688 - 747
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| ||| |||  ||||||||||||||||| ||||||| |||||||    
T  688 atagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaag 747  T

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Target: scaffold1878 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 586 - 527
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| ||| |||  ||||||||||||||||| ||||||| |||||||    
T  586 atagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaag 527  T

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Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 9538 - 9597
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||||||||| ||| |||  ||||||||||||||||| ||||||| |||||||    
T  9538 atagttaggggaccaaagtgataacaaaaaataagttaagggaccaaatgatgtattaag 9597  T

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Target: scaffold0290; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 8435 - 8384
Alignment:
Q  289 atagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgat 340  Q
    |||||||||||| |||| |||||||  ||||||||||||||||| |||||||    
T  8435 atagttaggggagcaaagtgaaaaccaaaaataagttaagggaccaaatgat 8384  T

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Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 2306 - 2368
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||||||  || ||| ||||||||||||| |||||||  |||||||||||||||||    
T  2306 gaccaaattgaaacactttataattaggggaccaaaatgaaaaccaaaaataagttaagggac 2368  T

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Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 56741 - 56819
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    ||||||||||| ||  || ||| ||||||||||||| ||||| |  ||||||||||||||||| ||||||| |||||||    
T  56741 gaccaaattgagacactttataattaggggaccaaagtgaaatcaaaaaataagttaagggaccaaatgatttattaag 56819  T

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Target: scaffold2127 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 557 - 634
Alignment:
Q  271 accaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctattaag 348  Q
    |||||||||| ||  || |||||||||||||| ||||||||||  |||||||||||| |||  ||||||| |||||||    
T  557 accaaattgagacactttatagttaggggacctaattgaaaaccaaaaataagttaatggatcaaatgatgtattaag 634  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 331
Target Start/End: Original strand, 13249 - 13306
Alignment:
Q  274 aaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaaggga 331  Q
    ||||||| || ||| ||||||||||||||||| |||||||  ||||||||||||||||    
T  13249 aaattgagacattttatagttaggggaccaaactgaaaaccaaaaataagttaaggga 13306  T

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Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 346
Target Start/End: Complemental strand, 11781 - 11705
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggactaaatgatctatta 346  Q
    ||||||||||||||  || ||| ||||||||| ||| ||||||   ||||||||||||||||| ||| ||| |||||    
T  11781 gaccaaattgaaacactttataattaggggactaaactgaaaataaaaaataagttaagggaccaaacgatgtatta 11705  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 1830 - 1768
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||| ||||||||||||| ||||| | ||||||||||||||||||    
T  1830 gaccaaattgagacactttataattaggggaccaaaatgaaatccgaaaataagttaagggac 1768  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 29032 - 29082
Alignment:
Q  22 atttaaatgtttgattttgtgctttttgttgaagttgaaaagataaatttt 72  Q
    ||||||| |||||||| |||| |||||||||||||||||| ||| ||||||    
T  29032 atttaaaggtttgattatgtggtttttgttgaagttgaaatgatgaatttt 29082  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 25997 - 25935
Alignment:
Q  270 gaccaaattgaaacgtttaatagttaggggaccaaattgaaaactgaaaataagttaagggac 332  Q
    ||||||||||| ||  || ||||||||||||||||| |||||   ||||||||||||||||||    
T  25997 gaccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 25935  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 23926 - 23869
Alignment:
Q  150 aattagatgttggtgatacatagttagatttgatagatctcatttatccaacgatctc 207  Q
    ||||||||| ||||||||||| |||||||||||| || ||| ||||| | ||||||||    
T  23926 aattagatgatggtgatacattgttagatttgatggaactcttttattctacgatctc 23869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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