View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3864_high_9 (Length: 282)
Name: NF3864_high_9
Description: NF3864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3864_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 14 - 274
Target Start/End: Complemental strand, 25273481 - 25273221
Alignment:
| Q |
14 |
aggtggtgggatggtggaagtgtttgtcagcggttagtttaaagttaaaacgacgacggtgtggagagcgaggtcgccagagtggatagcaagagagaat |
113 |
Q |
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| T |
25273481 |
aggtgatgggatggtggaagtgtttgtcagcggtaagtttaaagttaaaacgacgatggcgtggagagcgaggtcgccagagtggatagcaagagagaat |
25273382 |
T |
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| Q |
114 |
gatttgctaatggtggaagttgcgatgttggatcagtgtgtggttgcagtgatgctgtagctagctcctacttcttctcctatcttannnnnnnatgatt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
25273381 |
gatttgctaatggtggaagttgcgatgttggatcagtgtgtggttgcagtgatgctgtagctagctcctacttcttctcctatcttatttttttatgatt |
25273282 |
T |
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| Q |
214 |
tcctttctctctcaaacaaatatttcatatggcctttgtttttgttttgatgatgatgatg |
274 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
25273281 |
tcctttctctctcaaacaaatatttcatatggcatttgtttttgttttgatgatgatgatg |
25273221 |
T |
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