View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3865_high_5 (Length: 330)

Name: NF3865_high_5
Description: NF3865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3865_high_5
NF3865_high_5
[»] chr4 (49 HSPs)
chr4 (23-315)||(10253988-10254265)
chr4 (107-243)||(10253862-10253998)
chr4 (23-213)||(10254348-10254538)
chr4 (54-253)||(10217548-10217747)
chr4 (54-276)||(10254229-10254451)
chr4 (32-306)||(10254297-10254571)
chr4 (77-252)||(10217211-10217386)
chr4 (23-265)||(10217307-10217549)
chr4 (32-264)||(10217076-10217308)
chr4 (86-243)||(10217070-10217227)
chr4 (23-264)||(10217127-10217368)
chr4 (77-246)||(10254537-10254706)
chr4 (131-306)||(10217655-10217830)
chr4 (219-306)||(10243798-10243885)
chr4 (23-186)||(10254543-10254706)
chr4 (23-312)||(10217217-10217491)
chr4 (23-246)||(10264671-10264894)
chr4 (131-265)||(10217475-10217609)
chr4 (131-285)||(10254426-10254580)
chr4 (23-316)||(10254408-10254671)
chr4 (132-245)||(10264630-10264743)
chr4 (91-303)||(10243565-10243777)
chr4 (77-239)||(10253892-10254054)
chr4 (242-315)||(10217031-10217104)
chr4 (23-252)||(10217397-10217626)
chr4 (23-213)||(10217577-10217767)
chr4 (131-253)||(10254561-10254683)
chr4 (131-240)||(10217055-10217164)
chr4 (131-264)||(10217565-10217698)
chr4 (180-309)||(10243534-10243663)
chr4 (167-279)||(10243386-10243498)
chr4 (191-294)||(10217085-10217188)
chr4 (236-315)||(10243350-10243429)
chr4 (221-311)||(10243620-10243710)
chr4 (259-309)||(10264652-10264702)
chr4 (77-291)||(10264665-10264879)
chr4 (92-273)||(10243371-10243552)
chr4 (224-309)||(10243758-10243843)
chr4 (194-291)||(10264632-10264729)
chr4 (257-312)||(10254732-10254787)
chr4 (259-306)||(10264802-10264849)
chr4 (31-176)||(10243370-10243515)
chr4 (129-178)||(10243543-10243592)
chr4 (122-231)||(10243731-10243840)
chr4 (149-234)||(10243833-10243918)
chr4 (77-246)||(10264815-10264984)
chr4 (272-312)||(10217541-10217581)
chr4 (129-165)||(10217743-10217779)
chr4 (132-172)||(10265140-10265180)


Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 23 - 315
Target Start/End: Original strand, 10253988 - 10254265
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10253988 gtagagaaaccacccgtgtataaaccaccgtttgagaaacctccaatctaccatccaccagtagagataccaccagtgtacaacccaccagttgaacatc 10254087  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaattta 222  Q
    | |||||||||||||| ||               ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10254088 ctccaatttacaagcctcc---------------tgtatacaaaccaccagtagagcaacctcccgtctataagccaccagtagagaagcctccaattta 10254172  T
Q  223 caagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgtagaaaa 315  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  10254173 caagccaccagtagagaaacctcctgtttaccaacctcctgtttacaagcccccagttgagaaacctccagtgtacaagccacctgtagaaaa 10254265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 10253862 - 10253998
Alignment:
Q  107 ccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtag 206  Q
    |||||||||||| |||||||| |||| || |||||||||||||| |||||||| || ||||||||| |||||||||||||  | ||||||||||| ||||    
T  10253862 ccaccagttgaaaatcccccattttataaaccaccggtagagaaaccacctgtgtataaaccaccaatagagcaacctccaatttataagccacctgtag 10253961  T
Q  207 agaagcctccaatttacaagccaccagtagagaaacc 243  Q
    | || ||||||||||| || |||||||||||||||||    
T  10253962 aaaatcctccaatttataaaccaccagtagagaaacc 10253998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 10254348 - 10254538
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| ||||||||||||||| |||||  |||||||||| ||  | ||  | |||||||||||||  ||||| |||||||| |||||||||||  | |    
T  10254348 gtagagaaaccaccagtgtacaaaccacccgttgagaaacccccggtttataagccaccagtagagaaaccacctgtgtacaagccaccagttgagaagc 10254447  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcc 213  Q
    ||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||| | ||||| |  || |||||||| || ||||||||    
T  10254448 ccccaatttacaagccaccagtagagaaaccacctgtatacaagccaccagttgagaagcctccagcttacaagccaccagttgagaagcc 10254538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 253
Target Start/End: Original strand, 10217548 - 10217747
Alignment:
Q  54 ttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagcc 153  Q
    ||||||| ||||| |||||| | |||||||||||||  |||||||||||||| ||||| |||||  | || ||| |||| |||||||| || ||||||||    
T  10217548 ttgagaagcctcctatctacaagccaccagtagagaaaccaccagtgtacaagccacctgttgagaagcctccagtttataagccaccagttgagaagcc 10217647  T
Q  154 acctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttac 253  Q
    |||||| ||||| || ||||| ||| |||| || ||||| || || || ||||||||||||||| ||||||||||||| ||  | |||||||| ||||||    
T  10217648 acctgtgtacaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaagcctccagtttacaagccaccggtgtacaaacctccagtttac 10217747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 54 - 276
Target Start/End: Original strand, 10254229 - 10254451
Alignment:
Q  54 ttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagcc 153  Q
    |||||||||||||| | ||| | ||||| ||||| | ||||||||||||||| ||||| || ||| | || ||| | ||||||||||| ||||| |||||    
T  10254229 ttgagaaacctccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagccaccagtgtacaagccacctgtagaaaagcc 10254328  T
Q  154 acctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttac 253  Q
     ||| |||||||||||||||||||| |||| || || || || ||||| || ||||| || ||  |||| |||||||||||||||||||| ||||| |||    
T  10254329 tcctatatacaaaccaccagtagagaaaccaccagtgtacaaaccacccgttgagaaacccccggtttataagccaccagtagagaaaccacctgtgtac 10254428  T
Q  254 caaccacctgtttacaagccccc 276  Q
     | ||||| ||| | ||||||||    
T  10254429 aagccaccagttgagaagccccc 10254451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 32 - 306
Target Start/End: Original strand, 10254297 - 10254571
Alignment:
Q  32 ccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaattt 131  Q
    |||||||||||||| |||||  | || || ||||| || ||| | |||||||||||||  |||||||||||||| ||||| |||||  | |||||  |||    
T  10254297 ccaccagtgtacaagccacctgtagaaaagcctcctatatacaaaccaccagtagagaaaccaccagtgtacaaaccacccgttgagaaacccccggttt 10254396  T
Q  132 acaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccacc 231  Q
    | |||||||| |||||||| |||||||| ||||| |||||||| ||| | || ||  | || |||||||| |||||||| || ||  | |||||||||||    
T  10254397 ataagccaccagtagagaaaccacctgtgtacaagccaccagttgagaagcccccaatttacaagccaccagtagagaaaccacctgtatacaagccacc 10254496  T
Q  232 agtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacc 306  Q
    ||| ||||| ||||| | |||| | ||||| ||| | ||||| ||||| |||||||| || || |||||||||||    
T  10254497 agttgagaagcctccagcttacaagccaccagttgagaagccacctgtagagaaaccaccagtgtacaagccacc 10254571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 252
Target Start/End: Original strand, 10217211 - 10217386
Alignment:
Q  77 ccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtag 176  Q
    |||||||||||||  |||||||||||||| |||||||||||| | || ||  | ||||| ||||| ||||||||||||||||| ||||| ||||| ||||    
T  10217211 ccaccagtagagaaaccaccagtgtacaagccaccagttgaaaagcctccggtctacaaaccacctgtagagaagccacctgtttacaagccacctgtag 10217310  T
Q  177 agcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgttta 252  Q
    || |||| || || || |||||||| || |||||||||||  | ||||| ||||| |||||||| || ||||||||    
T  10217311 agaaaccaccagtgtacaagccaccagttgagaagcctccggtctacaaaccacctgtagagaagccacctgttta 10217386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 265
Target Start/End: Original strand, 10217307 - 10217549
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| ||||||||||||||| |||||  ||||||| |||||  ||||| | ||||| ||||||| |||||| || || || ||||| || ||  | |    
T  10217307 gtagagaaaccaccagtgtacaagccaccagttgagaagcctccggtctacaaaccacctgtagagaagccacctgtttataagccacctgtagagaaac 10217406  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaattta 222  Q
    | ||| | ||||||||||| || |||||||| || || |||||||| || |||||| | ||||| ||||| |||||||| |||||||| || ||| | ||    
T  10217407 caccagtgtacaagccaccagttgagaagcccccggtctacaaaccccctgtagagaagcctcctgtctacaagccaccagtagagaaaccgccagtgta 10217506  T
Q  223 caagccaccagtagagaaacctcctgtttaccaaccacctgtt 265  Q
    |||||||||||| |||||||| || || ||| |||| ||||||    
T  10217507 caagccaccagttgagaaacccccggtctacaaaccccctgtt 10217549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 264
Target Start/End: Original strand, 10217076 - 10217308
Alignment:
Q  32 ccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaattt 131  Q
    ||||| ||||| || |||||| | || ||||||||| | ||| | ||||| |||||||  |||||||||||||| |||||||||||  | |||||  | |    
T  10217076 ccacctgtgtataagccaccggtagaaaaacctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagccccccgtct 10217175  T
Q  132 acaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccacc 231  Q
    |||| || || ||||||||||| ||||| ||||| |||||||||||| |||| || || || |||||||| || || ||||||||  | ||||| |||||    
T  10217176 acaaacctcctgtagagaagcctcctgtttacaagccaccagtagagaaaccaccagtgtacaagccaccagttgaaaagcctccggtctacaaaccacc 10217275  T
Q  232 agtagagaaacctcctgtttaccaaccacctgt 264  Q
     |||||||| || ||||||||| | ||||||||    
T  10217276 tgtagagaagccacctgtttacaagccacctgt 10217308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 10217070 - 10217227
Alignment:
Q  86 gagatgccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctc 185  Q
    |||| |||||| ||||| || ||||| || ||| | || ||| ||||||| |||||||||||||| ||||| || ||||| |||||||| ||| | || |    
T  10217070 gagaagccacctgtgtataagccaccggtagaaaaacctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagcccc 10217169  T
Q  186 ccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacc 243  Q
    ||||||| || || || ||||||||||||||  |||||||||||||||||||||||||    
T  10217170 ccgtctacaaacctcctgtagagaagcctcctgtttacaagccaccagtagagaaacc 10217227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 264
Target Start/End: Original strand, 10217127 - 10217368
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| ||||||||||||||| |||||  ||||||| || ||  ||||| | || || ||||||| ||| || || ||||| |||||||| ||  | |    
T  10217127 gtagagaaaccaccagtgtacaagccaccagttgagaagccccccgtctacaaacctcctgtagagaagcctcctgtttacaagccaccagtagagaaac 10217226  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaattta 222  Q
    | ||| | ||||||||||| || || ||||| || || ||||||||||| |||||| | || || || || |||||||| |||||||| || ||| | ||    
T  10217227 caccagtgtacaagccaccagttgaaaagcctccggtctacaaaccacctgtagagaagccacctgtttacaagccacctgtagagaaaccaccagtgta 10217326  T
Q  223 caagccaccagtagagaaacctcctgtttaccaaccacctgt 264  Q
    |||||||||||| ||||| ||||| || ||| ||||||||||    
T  10217327 caagccaccagttgagaagcctccggtctacaaaccacctgt 10217368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 10254537 - 10254706
Alignment:
Q  77 ccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtag 176  Q
    ||||| |||||||  |||||||||||||| ||||| |||||  | |||||||||||||| ||||| || |||||||| || || ||||| ||||| || |    
T  10254537 ccacctgtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccggttg 10254636  T
Q  177 agcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcc 246  Q
    || |||| || ||||| |||||||| ||||| || || ||  |||||||||||||| | |||||||||||    
T  10254637 agaaaccacctgtctacaagccacctgtagaaaatccacctgtttacaagccaccatttgagaaacctcc 10254706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 131 - 306
Target Start/End: Original strand, 10217655 - 10217830
Alignment:
Q  131 tacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccac 230  Q
    |||||||| || || ||||| || || || |||||||| || |||||| | ||||| || || |||||||||||  | || |||||| ||||||||||||    
T  10217655 tacaagcccccagtcgagaaacccccggtctacaaacctcctgtagagaagcctccagtttacaagccaccggtgtacaaacctccagtttacaagccac 10217754  T
Q  231 cagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacc 306  Q
    |||||||||| || ||||| ||| | || || || ||||| ||||| |||||||||||||| || |||||||||||    
T  10217755 cagtagagaagccacctgtgtacaagcctccggtctacaaacccccagttgagaaacctccagtttacaagccacc 10217830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 10243798 - 10243885
Alignment:
Q  219 tttacaagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacc 306  Q
    |||||||||| ||||| ||||| ||||| || ||| | |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  10243798 tttacaagcctccagttgagaagcctccggtctacaagccacctgtttacaagcccccagttgagaaacctccagtctacaagccacc 10243885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 10254543 - 10254706
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| ||||||||||||||| |||||| ||||||| || ||||| ||| | |||||||| |||| ||| ||||||||||| ||||| |||||  | |    
T  10254543 gtagagaaaccaccagtgtacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccggttgagaaac 10254642  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcc 186  Q
    | ||  | ||||||||||| ||||| || |||||||| ||||| |||||| | ||| |||||||    
T  10254643 cacctgtctacaagccacctgtagaaaatccacctgtttacaagccaccatttgagaaacctcc 10254706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 312
Target Start/End: Original strand, 10217217 - 10217491
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| ||||||||||||||| |||||  |||| || |||||  ||||| | ||||| ||||||| |||||| || ||||| ||||| || ||  | |    
T  10217217 gtagagaaaccaccagtgtacaagccaccagttgaaaagcctccggtctacaaaccacctgtagagaagccacctgtttacaagccacctgtagagaaac 10217316  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaattta 222  Q
    | ||| | ||||||||||| || |||||||| || || ||||||||||| |||||| | || || || ||||||||||| |||||||| || ||| | ||    
T  10217317 caccagtgtacaagccaccagttgagaagcctccggtctacaaaccacctgtagagaagccacctgtttataagccacctgtagagaaaccaccagtgta 10217416  T
Q  223 caagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgtaga 312  Q
    |||||||||||| ||||| || || || ||| ||||               |||||| ||||| |||||||||||||||||||| |||||    
T  10217417 caagccaccagttgagaagcccccggtctacaaacc---------------ccctgtagagaagcctcctgtctacaagccaccagtaga 10217491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 10264671 - 10264894
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| ||| || |||||||| |||||  ||||||| || ||| | ||| | || |||||||||| ||| | |||| |||| |||||||||||  | |    
T  10264671 gtagagaaacctccggtgtacaagccacctgttgagaagcccccagtttacaaacctccagtagagaagcctctagtgcacaagccaccagttgataaac 10264770  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaattta 222  Q
    | ||  |  |||||||||| || ||||||| |||||| ||||| ||||| |||||| ||||||| || || |||||||| || |||||||| ||| || |    
T  10264771 cacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccaccagttgagaagcccccagttca 10264870  T
Q  223 caagccaccagtagagaaacctcc 246  Q
    ||| || ||||||||||| |||||    
T  10264871 caaacctccagtagagaagcctcc 10264894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 10217475 - 10217609
Alignment:
Q  131 tacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccac 230  Q
    ||||||||||| |||||||| || || || ||||| |||||||| ||| |||| || ||||| || || || || ||||||||||| || ||||||||||    
T  10217475 tacaagccaccagtagagaaaccgccagtgtacaagccaccagttgagaaacccccggtctacaaaccccctgttgagaagcctcctatctacaagccac 10217574  T
Q  231 cagtagagaaacctcctgtttaccaaccacctgtt 265  Q
    ||||||||||||| || || ||| | |||||||||    
T  10217575 cagtagagaaaccaccagtgtacaagccacctgtt 10217609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 285
Target Start/End: Original strand, 10254426 - 10254580
Alignment:
Q  131 tacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccac 230  Q
    ||||||||||| || |||||||| ||  | ||||| |||||||||||| |||| || || || |||||||| || ||||||||||||  |||||||||||    
T  10254426 tacaagccaccagttgagaagcccccaatttacaagccaccagtagagaaaccacctgtatacaagccaccagttgagaagcctccagcttacaagccac 10254525  T
Q  231 cagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaa 285  Q
    |||| ||||| || |||||  |  ||||||| || |||||||| || ||||||||    
T  10254526 cagttgagaagccacctgtagagaaaccaccagtgtacaagccaccggttgagaa 10254580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 316
Target Start/End: Original strand, 10254408 - 10254671
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| |||||| |||||||| |||||  ||||||| || ||||| ||| | |||||||||||||  ||||| || ||||| |||||||||||  | |    
T  10254408 gtagagaaaccacctgtgtacaagccaccagttgagaagcccccaatttacaagccaccagtagagaaaccacctgtatacaagccaccagttgagaagc 10254507  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaattta 222  Q
    | |||  |||||||||||| || ||||||||||||||| | |||||||||||                || ||||||||||| |||||||| ||||||||    
T  10254508 ctccagcttacaagccaccagttgagaagccacctgtagagaaaccaccagtg---------------tacaagccaccggttgagaagcccccaattta 10254592  T
Q  223 caagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgtagaaaat 316  Q
    ||| |||||||| ||||| ||||| || |||               ||||| || ||||||||||| |||||||||||||||||||||||||||    
T  10254593 caaaccaccagttgagaagcctccagtgtac---------------aagccaccggttgagaaaccacctgtctacaagccacctgtagaaaat 10254671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 10264630 - 10264743
Alignment:
Q  132 acaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccacc 231  Q
    |||||||||| || ||||||| |||||| ||||| ||||| |||||| ||||||| || || |||||||| || |||||||| ||| ||||||| || ||    
T  10264630 acaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccacctgttgagaagcccccagtttacaaacctcc 10264729  T
Q  232 agtagagaaacctc 245  Q
    ||||||||| ||||    
T  10264730 agtagagaagcctc 10264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 303
Target Start/End: Original strand, 10243565 - 10243777
Alignment:
Q  91 gccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtc 190  Q
    ||||||||| ||||| |||||||| ||  | |||||| ||||||||||||| ||| | || || || |||   ||||| |||||  |  ||||||| ||     
T  10243565 gccaccagtttacaaaccaccagtagagaagcccccagtttacaagccacctgtatacaaacccccagtagtgaaacccccagtctacaaacctcctgtt 10243664  T
Q  191 tataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctc 290  Q
    || |||||||| || |||||||||||| |||||||||||||||||| ||| || ||||||||| | || || || |||||||| || || | ||| || |    
T  10243665 tacaagccaccagttgagaagcctccagtttacaagccaccagtagtgaagccacctgtttacaagcccccagtctacaagccaccagtagtgaagccac 10243764  T
Q  291 ctgtctacaagcc 303  Q
    |||| ||||||||    
T  10243765 ctgtatacaagcc 10243777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 10253892 - 10254054
Alignment:
Q  77 ccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtag 176  Q
    ||||| |||||||  ||||| ||||| || |||||| | || || || |||||||| |||||||| ||||| || || ||  | || |||||||||||||    
T  10253892 ccaccggtagagaaaccacctgtgtataaaccaccaatagagcaacctccaatttataagccacctgtagaaaatcctccaatttataaaccaccagtag 10253991  T
Q  177 agcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagaga 239  Q
    || |||| ||||| ||||| |||||| | ||||| |||||||| ||| | |||||||||||||    
T  10253992 agaaaccacccgtgtataaaccaccgtttgagaaacctccaatctaccatccaccagtagaga 10254054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 10217031 - 10217104
Alignment:
Q  242 cctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgtagaaaa 315  Q
    ||||| |||||||||||||| || |||||||||||||||||||| || ||||| || |||||||| ||||||||    
T  10217031 cctccggtttaccaaccaccggtctacaagccccctgttgagaagccacctgtgtataagccaccggtagaaaa 10217104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 10217397 - 10217626
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| ||||||||||||||| |||||  ||||||| || ||  ||||| | || || ||||||| ||| || || ||||| |||||||| ||  | |    
T  10217397 gtagagaaaccaccagtgtacaagccaccagttgagaagcccccggtctacaaaccccctgtagagaagcctcctgtctacaagccaccagtagagaaac 10217496  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaattta 222  Q
    | ||| | ||||||||||| || ||||| || || || |||||||| || || ||| | |||||  |||| |||||||| |||||||| || ||| | ||    
T  10217497 cgccagtgtacaagccaccagttgagaaacccccggtctacaaaccccctgttgagaagcctcctatctacaagccaccagtagagaaaccaccagtgta 10217596  T
Q  223 caagccaccagtagagaaacctcctgttta 252  Q
    ||||||||| || ||||| ||||| |||||    
T  10217597 caagccacctgttgagaagcctccagttta 10217626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 10217577 - 10217767
Alignment:
Q  23 gtagagataccaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatc 122  Q
    ||||||| ||||||||||||||| |||||  ||||||| |||||| | ||  | |||||||| |||| |||||| |||||||| || ||||| ||  | |    
T  10217577 gtagagaaaccaccagtgtacaagccacctgttgagaagcctccagtttataagccaccagttgagaagccacctgtgtacaagcccccagtcgagaaac 10217676  T
Q  123 ccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcc 213  Q
    ||||  | ||||| || || ||||||||||| || || ||||| ||||| ||  |  ||||||| || || |||||||| |||||||||||    
T  10217677 ccccggtctacaaacctcctgtagagaagcctccagtttacaagccaccggtgtacaaacctccagtttacaagccaccagtagagaagcc 10217767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 10254561 - 10254683
Alignment:
Q  131 tacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccac 230  Q
    |||||||||||||| |||||||| ||  | |||||||||||||| ||| | ||||| || || ||||||||||| ||||| || ||  | ||||||||||    
T  10254561 tacaagccaccggttgagaagcccccaatttacaaaccaccagttgagaagcctccagtgtacaagccaccggttgagaaaccacctgtctacaagccac 10254660  T
Q  231 cagtagagaaacctcctgtttac 253  Q
    | ||||| || || |||||||||    
T  10254661 ctgtagaaaatccacctgtttac 10254683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 10217055 - 10217164
Alignment:
Q  131 tacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccac 230  Q
    |||||||| || || |||||||||||||| || || ||||| |||||  ||||||| || || || |||||||||||||| || ||| | ||||||||||    
T  10217055 tacaagccccctgttgagaagccacctgtgtataagccaccggtagaaaaacctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccac 10217154  T
Q  231 cagtagagaa 240  Q
    |||| |||||    
T  10217155 cagttgagaa 10217164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 10217565 - 10217698
Alignment:
Q  131 tacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccac 230  Q
    ||||||||||| |||||||| ||||| || ||||| ||||| || ||| | ||||| || ||||||||||| || |||||||| ||  | |||||||| |    
T  10217565 tacaagccaccagtagagaaaccaccagtgtacaagccacctgttgagaagcctccagtttataagccaccagttgagaagccacctgtgtacaagcccc 10217664  T
Q  231 cagtagagaaacctcctgtttaccaaccacctgt 264  Q
    |||| |||||||| || || ||| |||| |||||    
T  10217665 cagtcgagaaacccccggtctacaaacctcctgt 10217698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 10243534 - 10243663
Alignment:
Q  180 aacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgt 279  Q
    ||||||| || || |||||||||||  | ||||| ||| ||||||| |||||||||||||| || || |||||| | |||||||| ||||| ||||| ||    
T  10243534 aacctcctgtttacaagccaccggtgtacaagccaccagtttacaaaccaccagtagagaagcccccagtttacaagccacctgtatacaaacccccagt 10243633  T
Q  280 tgagaaacctcctgtctacaagccacctgt 309  Q
     | |||||| || |||||||| || |||||    
T  10243634 agtgaaacccccagtctacaaacctcctgt 10243663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 10243386 - 10243498
Alignment:
Q  167 ccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttaccaaccacctgttt 266  Q
    |||||||| ||| |||| || ||||| || || || ||||| ||||| ||| | || ||||||||||||||||| ||||| |||||| ||||||| || |    
T  10243386 ccaccagttgagaaacccccggtctacaaaccccctgtagaaaagccaccagtatataagccaccagtagagaagcctccagtttacaaaccaccggtgt 10243485  T
Q  267 acaagccccctgt 279  Q
    ||||||| |||||    
T  10243486 acaagccacctgt 10243498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 10217085 - 10217188
Alignment:
Q  191 tataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctc 290  Q
    ||||||||||||||||| || |||||| ||||||| ||||| ||||||||||| || || ||| | ||||| ||| | |||||||| ||  | |||||||    
T  10217085 tataagccaccggtagaaaaacctccagtttacaaaccaccggtagagaaaccaccagtgtacaagccaccagttgagaagccccccgtctacaaacctc 10217184  T
Q  291 ctgt 294  Q
    ||||    
T  10217185 ctgt 10217188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 10243350 - 10243429
Alignment:
Q  236 gagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgtagaaaa 315  Q
    ||||| ||||| |||||||||||||| || || ||||| || ||||||||||| || |||||||| || |||||||||||    
T  10243350 gagaagcctccggtttaccaaccaccggtgtataagccaccagttgagaaacccccggtctacaaaccccctgtagaaaa 10243429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 10243620 - 10243710
Alignment:
Q  221 tacaagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgtag 311  Q
    ||||| || ||||||| |||||| || || ||| |||| |||||||||||||| || |||||||| ||||| || ||||||||||| ||||    
T  10243620 tacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagccaccagttgagaagcctccagtttacaagccaccagtag 10243710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 10264652 - 10264702
Alignment:
Q  259 acctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgt 309  Q
    ||||||||||||||| ||||| ||||||||||| || ||||||||||||||    
T  10264652 acctgtttacaagccacctgtagagaaacctccggtgtacaagccacctgt 10264702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 291
Target Start/End: Original strand, 10264665 - 10264879
Alignment:
Q  77 ccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtag 176  Q
    ||||| |||||||  || || |||||||| ||||| |||||  | |||||| ||||||| || || ||||||||||| |  ||  |||| |||||||| |    
T  10264665 ccacctgtagagaaacctccggtgtacaagccacctgttgagaagcccccagtttacaaacctccagtagagaagcctctagtgcacaagccaccagttg 10264764  T
Q  177 agcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccc 276  Q
    |  |||| || ||  | |||||||| || |||||||  ||  ||||||||||||| |||||||||||||| || ||| | ||||| ||| | ||||||||    
T  10264765 ataaaccacctgtacacaagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccaccagttgagaagccccc 10264864  T
Q  277 tgttgagaaacctcc 291  Q
     ||| | ||||||||    
T  10264865 agttcacaaacctcc 10264879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 273
Target Start/End: Original strand, 10243371 - 10243552
Alignment:
Q  92 ccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtct 191  Q
    ||||| ||||| || |||||||||||  | |||||  | ||||| || || ||||| |||||||| ||||| || |||||||||||| | ||||| || |    
T  10243371 ccaccggtgtataagccaccagttgagaaacccccggtctacaaaccccctgtagaaaagccaccagtatataagccaccagtagagaagcctccagttt 10243470  T
Q  192 ataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagcc 273  Q
    | || ||||||||  | ||||| ||  | ||||| || ||||||| |||||| || || ||| |||| ||||||||||||||    
T  10243471 acaaaccaccggtgtacaagccacctgtgtacaaacccccagtagtgaaacccccagtctacaaacctcctgtttacaagcc 10243552  T

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Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 10243758 - 10243843
Alignment:
Q  224 aagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgt 309  Q
    |||||||| ||| | || ||||| || ||| | ||||| ||||||||||| || |||||||| ||||| |||||||||||||||||    
T  10243758 aagccacctgtatacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtctacaagccacctgt 10243843  T

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Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Original strand, 10264632 - 10264729
Alignment:
Q  194 aagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcctgtttaccaaccacctgtttacaagccccctgttgagaaacctcc 291  Q
    |||||||| || |||||||  ||  ||||||||||||| |||||||||||||| || ||| | ||||||||| | |||||||| ||| | ||||||||    
T  10264632 aagccaccagttgagaagctacctgtttacaagccacctgtagagaaacctccggtgtacaagccacctgttgagaagcccccagtttacaaacctcc 10264729  T

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Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 312
Target Start/End: Original strand, 10254732 - 10254787
Alignment:
Q  257 ccacctgtttacaagccccctgttgagaaacctcctgtctacaagccacctgtaga 312  Q
    ||||| || |||||||||||| |||||||||| ||  |||||||||||||||||||    
T  10254732 ccacccgtgtacaagcccccttttgagaaaccccccatctacaagccacctgtaga 10254787  T

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Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 10264802 - 10264849
Alignment:
Q  259 acctgtttacaagccccctgttgagaaacctcctgtctacaagccacc 306  Q
    ||||||||||||||| ||||| ||||||||||| || |||||||||||    
T  10264802 acctgtttacaagccacctgtagagaaacctccggtgtacaagccacc 10264849  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 10243370 - 10243515
Alignment:
Q  31 accaccagtgtacaacccaccgtttgagaaacctccaatctaccatccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaatt 130  Q
    |||||| ||||| || |||||  |||||||||| ||  ||||| | || || ||||| | ||||||||| || || |||||||| ||  | || ||| ||    
T  10243370 accaccggtgtataagccaccagttgagaaacccccggtctacaaaccccctgtagaaaagccaccagtatataagccaccagtagagaagcctccagtt 10243469  T
Q  131 tacaagccaccggtagagaagccacctgtatacaaaccaccagtag 176  Q
    ||||| ||||||||  | ||||||||||| |||||||| |||||||    
T  10243470 tacaaaccaccggtgtacaagccacctgtgtacaaacccccagtag 10243515  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 10243543 - 10243592
Alignment:
Q  129 tttacaagccaccggtagagaagccacctgtatacaaaccaccagtagag 178  Q
    ||||||||||||||||  | |||||||| || ||||||||||||||||||    
T  10243543 tttacaagccaccggtgtacaagccaccagtttacaaaccaccagtagag 10243592  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 10243731 - 10243840
Alignment:
Q  122 cccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaattt 221  Q
    |||||| | ||||||||||| |||| |||||||||||||||||| || |||||  |  | || ||||| || ||||| || || |||||||||||  | |    
T  10243731 cccccagtctacaagccaccagtagtgaagccacctgtatacaagcctccagtctacaagccacccgtttacaagcctccagttgagaagcctccggtct 10243830  T
Q  222 acaagccacc 231  Q
    ||||||||||    
T  10243831 acaagccacc 10243840  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 10243833 - 10243918
Alignment:
Q  149 aagccacctgtatacaaaccaccagtagagcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagt 234  Q
    ||||||||||| ||||| || ||||| ||| ||||||| ||||| |||||||||||  | ||||||||| |  | |||||||||||    
T  10243833 aagccacctgtttacaagcccccagttgagaaacctccagtctacaagccaccggtttacaagcctccagtcgagaagccaccagt 10243918  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 246
Target Start/End: Original strand, 10264815 - 10264984
Alignment:
Q  77 ccaccagtagagatgccaccagtgtacaacccaccagttgaacatcccccaatttacaagccaccggtagagaagccacctgtatacaaaccaccagtag 176  Q
    ||||| |||||||  || || |||||||| |||||||||||  | |||||| || |||| || || ||||||||||| || ||  ||||||| | ||| |    
T  10264815 ccacctgtagagaaacctccggtgtacaagccaccagttgagaagcccccagttcacaaacctccagtagagaagcctccagttcacaaacctcaagtgg 10264914  T
Q  177 agcaacctcccgtctataagccaccggtagagaagcctccaatttacaagccaccagtagagaaacctcc 246  Q
    || | || || || || |||||||| || ||||||  |||||||||||| || | ||||||||| |||||    
T  10264915 agaagccacctgtatacaagccaccagttgagaagtttccaatttacaaacctctagtagagaagcctcc 10264984  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 10217541 - 10217581
Alignment:
Q  272 ccccctgttgagaaacctcctgtctacaagccacctgtaga 312  Q
    |||||||||||||| |||||| ||||||||||||| |||||    
T  10217541 ccccctgttgagaagcctcctatctacaagccaccagtaga 10217581  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 10217743 - 10217779
Alignment:
Q  129 tttacaagccaccggtagagaagccacctgtatacaa 165  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  10217743 tttacaagccaccagtagagaagccacctgtgtacaa 10217779  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 10265140 - 10265180
Alignment:
Q  132 acaagccaccggtagagaagccacctgtatacaaaccacca 172  Q
    ||||||||||||| ||||| |||||||||||||| ||||||    
T  10265140 acaagccaccggttgagaaaccacctgtatacaagccacca 10265180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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