View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3869_low_9 (Length: 250)

Name: NF3869_low_9
Description: NF3869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3869_low_9
NF3869_low_9
[»] chr7 (9 HSPs)
chr7 (24-240)||(36613750-36613965)
chr7 (128-158)||(4604778-4604808)
chr7 (128-158)||(49029507-49029537)
chr7 (128-157)||(7220987-7221016)
chr7 (122-158)||(2885743-2885779)
chr7 (123-155)||(14057704-14057736)
chr7 (123-155)||(14367732-14367764)
chr7 (128-156)||(15682405-15682433)
chr7 (63-111)||(30200032-30200080)
[»] chr3 (8 HSPs)
chr3 (72-158)||(388283-388369)
chr3 (123-158)||(52882683-52882718)
chr3 (128-158)||(45834621-45834651)
chr3 (128-158)||(47555353-47555383)
chr3 (122-158)||(24778630-24778666)
chr3 (63-151)||(36304132-36304220)
chr3 (123-159)||(46148254-46148290)
chr3 (122-158)||(50960658-50960694)
[»] chr5 (2 HSPs)
chr5 (122-158)||(41894298-41894334)
chr5 (126-158)||(1287600-1287632)
[»] chr4 (6 HSPs)
chr4 (63-158)||(25574990-25575085)
chr4 (128-158)||(13805286-13805316)
chr4 (128-158)||(54470438-54470468)
chr4 (121-158)||(7947161-7947198)
chr4 (122-158)||(50862856-50862892)
chr4 (128-156)||(55579262-55579290)
[»] chr2 (3 HSPs)
chr2 (123-158)||(9496092-9496127)
chr2 (128-158)||(7326181-7326211)
chr2 (122-158)||(3720436-3720472)
[»] chr1 (9 HSPs)
chr1 (123-158)||(40568431-40568466)
chr1 (128-158)||(2914144-2914174)
chr1 (128-158)||(4001476-4001506)
chr1 (128-158)||(15086153-15086183)
chr1 (128-158)||(42337787-42337817)
chr1 (122-156)||(50257795-50257829)
chr1 (128-158)||(51602287-51602317)
chr1 (122-158)||(4590553-4590589)
chr1 (122-158)||(43481819-43481855)
[»] scaffold0392 (1 HSPs)
scaffold0392 (128-158)||(6793-6823)
[»] chr8 (3 HSPs)
chr8 (128-158)||(14742859-14742889)
chr8 (128-158)||(40813555-40813585)
chr8 (122-158)||(45419460-45419496)
[»] chr6 (1 HSPs)
chr6 (128-181)||(3206456-3206510)


Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 24 - 240
Target Start/End: Original strand, 36613750 - 36613965
Alignment:
Q  24 tatatgcaaggggggaagaccccgaaaaactaaccattcagaaatatctagagattaacgtgttcgatataaatacggtatatgataggagattgcgatg 123  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36613750 tatatgcaagggg-gaagacccggaaaaactaaccattcagaaatatctagagattaacgtgttggatataaatacggtatatgataggagattgcgatg 36613848  T
Q  124 taagttgatccatgtagccaaccccacttagtgggtaagacatgataattgttgttgtgttgtggataacttgatcaaggatttaaattatggttatggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36613849 taagttgatccatgtagccaaccccacttagtgggtaagacatgataattgttgttgtgttgtggataacttgatcaaggatttaaattatggttatggt 36613948  T
Q  224 tgcgtcgcttccctttg 240  Q
    |||||||||||||||||    
T  36613949 tgcgtcgcttccctttg 36613965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 4604778 - 4604808
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  4604778 ttgatccatgtagccaaccccacttagtggg 4604808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 49029507 - 49029537
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  49029507 ttgatccatgtagccaaccccacttagtggg 49029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 7220987 - 7221016
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtgg 157  Q
    ||||||||||||||||||||||||||||||    
T  7220987 ttgatccatgtagccaaccccacttagtgg 7221016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 2885779 - 2885743
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  2885779 tgtaatttgatccatgtagccgaccccacttagtggg 2885743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 14057704 - 14057736
Alignment:
Q  123 gtaagttgatccatgtagccaaccccacttagt 155  Q
    |||| ||||||||||||||||||||||||||||    
T  14057704 gtaatttgatccatgtagccaaccccacttagt 14057736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 14367732 - 14367764
Alignment:
Q  123 gtaagttgatccatgtagccaaccccacttagt 155  Q
    |||| ||||||||||||||||||||||||||||    
T  14367732 gtaatttgatccatgtagccaaccccacttagt 14367764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 15682405 - 15682433
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtg 156  Q
    |||||||||||||||||||||||||||||    
T  15682405 ttgatccatgtagccaaccccacttagtg 15682433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 30200080 - 30200032
Alignment:
Q  63 agaaatatctagagattaacgtgttcgatataaatacggtatatgatag 111  Q
    ||||| ||||||||||||| | ||| |||||||||| ||||||||||||    
T  30200080 agaaagatctagagattaatgagtttgatataaatatggtatatgatag 30200032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 158
Target Start/End: Complemental strand, 388369 - 388283
Alignment:
Q  72 tagagattaacgtgttcgatataaatacggtatatgataggagattgcgatgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||| | ||  |||| ||||||||||||||||||   |||  || |||| |||||| ||||||||||||||||||||||||    
T  388369 tagagattaatgagtaagatagaaatacggtatatgatagagcattatgacgtaatttgatcaatgtagccaaccccacttagtggg 388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 158
Target Start/End: Complemental strand, 52882718 - 52882683
Alignment:
Q  123 gtaagttgatccatgtagccaaccccacttagtggg 158  Q
    |||| |||||||||||||||||||||||||||||||    
T  52882718 gtaatttgatccatgtagccaaccccacttagtggg 52882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 45834651 - 45834621
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  45834651 ttgatccatgtagccaaccccacttagtggg 45834621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 47555383 - 47555353
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  47555383 ttgatccatgtagccaaccccacttagtggg 47555353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 24778666 - 24778630
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  24778666 tgtaatttgatccatgtagccgaccccacttagtggg 24778630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 36304132 - 36304220
Alignment:
Q  63 agaaatatctagagattaacgtgttcgatataaatacggtatatgataggagattgcgatgtaagttgatccatgtagccaaccccact 151  Q
    ||||| ||||||||||||| | ||| |||  ||||| ||| |||||||||| |||  |  |||| ||||||||||||||| ||||||||    
T  36304132 agaaagatctagagattaatgagttggatcaaaatatggtttatgataggacattatggcgtaatttgatccatgtagccgaccccact 36304220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 46148254 - 46148290
Alignment:
Q  123 gtaagttgatccatgtagccaaccccacttagtgggt 159  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  46148254 gtaatttgatccatgtagccgaccccacttagtgggt 46148290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 50960694 - 50960658
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  50960694 tgtaatttgatccatttagccaaccccacttagtggg 50960658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 41894298 - 41894334
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| |||||||||||||||||||||||||||||||    
T  41894298 tgtaatttgatccatgtagccaaccccacttagtggg 41894334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 1287632 - 1287600
Alignment:
Q  126 agttgatccatgtagccaaccccacttagtggg 158  Q
    ||||||||||||||||| |||||||||||||||    
T  1287632 agttgatccatgtagccgaccccacttagtggg 1287600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 25574990 - 25575085
Alignment:
Q  63 agaaatatctagagattaacgtgttcgatataaatacggtatatgataggagattgcgatgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||||||| | ||| |||  ||||| ||| |||||||| | |||| | ||||| ||||||||||||||  |||||| ||||||||    
T  25574990 agaaagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagaccccatttagtggg 25575085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 13805316 - 13805286
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  13805316 ttgatccatgtagccaaccccacttagtggg 13805286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 54470438 - 54470468
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  54470438 ttgatccatgtagccaaccccacttagtggg 54470468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 7947161 - 7947198
Alignment:
Q  121 atgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  7947161 atgtaatttgatccatgtagccgaccccacttagtggg 7947198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 50862856 - 50862892
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  50862856 tgtaatttgatccatgtagccgaccccacttagtggg 50862892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 55579262 - 55579290
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtg 156  Q
    |||||||||||||||||||||||||||||    
T  55579262 ttgatccatgtagccaaccccacttagtg 55579290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 9496092 - 9496127
Alignment:
Q  123 gtaagttgatccatgtagccaaccccacttagtggg 158  Q
    |||| |||||||||||||||||||||||||||||||    
T  9496092 gtaatttgatccatgtagccaaccccacttagtggg 9496127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 7326211 - 7326181
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  7326211 ttgatccatgtagccaaccccacttagtggg 7326181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 3720472 - 3720436
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  3720472 tgtaatttgatccatgtagccgaccccacttagtggg 3720436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000005; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 158
Target Start/End: Complemental strand, 40568466 - 40568431
Alignment:
Q  123 gtaagttgatccatgtagccaaccccacttagtggg 158  Q
    |||| |||||||||||||||||||||||||||||||    
T  40568466 gtaatttgatccatgtagccaaccccacttagtggg 40568431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 2914174 - 2914144
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  2914174 ttgatccatgtagccaaccccacttagtggg 2914144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 4001506 - 4001476
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  4001506 ttgatccatgtagccaaccccacttagtggg 4001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 15086153 - 15086183
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  15086153 ttgatccatgtagccaaccccacttagtggg 15086183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 42337787 - 42337817
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  42337787 ttgatccatgtagccaaccccacttagtggg 42337817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 50257795 - 50257829
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtg 156  Q
    ||||| |||||||||||||||||||||||||||||    
T  50257795 tgtaatttgatccatgtagccaaccccacttagtg 50257829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 51602287 - 51602317
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  51602287 ttgatccatgtagccaaccccacttagtggg 51602317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 4590589 - 4590553
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  4590589 tgtaatttgatccatgtagccgaccccacttagtggg 4590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 43481855 - 43481819
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  43481855 tgtaatttgatccatgtagccgaccccacttagtggg 43481819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 6823 - 6793
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  6823 ttgatccatgtagccaaccccacttagtggg 6793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 14742889 - 14742859
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  14742889 ttgatccatgtagccaaccccacttagtggg 14742859  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 40813555 - 40813585
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg 158  Q
    |||||||||||||||||||||||||||||||    
T  40813555 ttgatccatgtagccaaccccacttagtggg 40813585  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 45419460 - 45419496
Alignment:
Q  122 tgtaagttgatccatgtagccaaccccacttagtggg 158  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  45419460 tgtaatttgatccatgtagccgaccccacttagtggg 45419496  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 3206510 - 3206456
Alignment:
Q  128 ttgatccatgtagccaaccccacttagtggg-taagacatgataattgttgttgt 181  Q
    ||||||||||||||| ||||||||||||||| |||||| || | |||||||||||    
T  3206510 ttgatccatgtagccgaccccacttagtgggataagacttggttattgttgttgt 3206456  T

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