View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3870_high_13 (Length: 221)
Name: NF3870_high_13
Description: NF3870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3870_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 41705724 - 41705520
Alignment:
| Q |
1 |
ctttggtttcaatggagtctaaagggcaatgagccattgtgcatagatcggaagagggggtggaactgtgtgctacagagcatgcatgggagttgcatga |
100 |
Q |
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| T |
41705724 |
ctttggtttcaatggagtctaaagggcaatgagccattgtgcatagatcggaagagggggtggaactgtgtgctacagagcatgcatgggagttgcatga |
41705625 |
T |
|
| Q |
101 |
aatgggggtgctgtgggagatgttggtagggggagagggatccgaggtaagcttgggttttaattcacagaggatgcagttgaacggtgtgcatgggaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41705624 |
aatgggggtgctgtgggagatgttggtagggggagagggatccgaggtaagcttgggttttaattcacagaggatgcagttgaacggtgtgcatgggaac |
41705525 |
T |
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| Q |
201 |
caaac |
205 |
Q |
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||||| |
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| T |
41705524 |
caaac |
41705520 |
T |
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