View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3870_low_2 (Length: 636)

Name: NF3870_low_2
Description: NF3870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3870_low_2
NF3870_low_2
[»] chr1 (76 HSPs)
chr1 (9-617)||(41957772-41958389)
chr1 (170-316)||(2225223-2225369)
chr1 (163-316)||(6133653-6133807)
chr1 (157-276)||(33193089-33193208)
chr1 (156-316)||(26980283-26980445)
chr1 (157-313)||(19101623-19101781)
chr1 (157-316)||(11987623-11987784)
chr1 (141-285)||(29673505-29673649)
chr1 (142-311)||(35336868-35337033)
chr1 (148-316)||(44271915-44272085)
chr1 (159-275)||(30678935-30679051)
chr1 (157-316)||(931371-931532)
chr1 (164-313)||(8741252-8741405)
chr1 (157-312)||(10659791-10659948)
chr1 (157-312)||(8899015-8899172)
chr1 (165-316)||(28218078-28218231)
chr1 (180-317)||(6325858-6325994)
chr1 (156-285)||(32211805-32211934)
chr1 (182-318)||(3872681-3872818)
chr1 (181-313)||(22540368-22540502)
chr1 (157-276)||(41948168-41948287)
chr1 (157-316)||(25543337-25543497)
chr1 (145-310)||(4578585-4578752)
chr1 (157-313)||(15523210-15523364)
chr1 (157-313)||(15531204-15531358)
chr1 (159-277)||(45179270-45179388)
chr1 (142-263)||(31866368-31866488)
chr1 (163-285)||(15928585-15928707)
chr1 (164-302)||(51732290-51732428)
chr1 (160-317)||(11135735-11135895)
chr1 (206-312)||(41095680-41095788)
chr1 (184-317)||(49730860-49730995)
chr1 (206-317)||(11430437-11430550)
chr1 (206-317)||(32848654-32848767)
chr1 (163-285)||(37552977-37553099)
chr1 (206-313)||(41917995-41918104)
chr1 (180-312)||(1093118-1093250)
chr1 (157-256)||(33114030-33114129)
chr1 (178-317)||(37525527-37525666)
chr1 (182-277)||(50539162-50539257)
chr1 (236-318)||(43851136-43851220)
chr1 (190-298)||(24911480-24911588)
chr1 (250-315)||(39039470-39039537)
chr1 (206-316)||(14094072-14094184)
chr1 (157-303)||(27570235-27570383)
chr1 (164-284)||(28109899-28110019)
chr1 (157-277)||(39974222-39974336)
chr1 (157-277)||(15468258-15468378)
chr1 (175-315)||(46335092-46335237)
chr1 (236-316)||(39019572-39019648)
chr1 (150-237)||(47644310-47644399)
chr1 (158-277)||(15660931-15661049)
chr1 (246-316)||(41095603-41095675)
chr1 (183-267)||(743467-743551)
chr1 (163-219)||(12767356-12767412)
chr1 (158-285)||(13114692-13114820)
chr1 (236-317)||(18157034-18157117)
chr1 (180-280)||(39499430-39499529)
chr1 (157-313)||(33059915-33060072)
chr1 (236-316)||(44739115-44739197)
chr1 (246-317)||(11135853-11135926)
chr1 (157-267)||(28941870-28941980)
chr1 (141-211)||(29673678-29673748)
chr1 (246-316)||(13388331-13388403)
chr1 (164-209)||(16948558-16948603)
chr1 (236-316)||(9165299-9165381)
chr1 (274-321)||(11851916-11851963)
chr1 (236-279)||(13388440-13388483)
chr1 (545-616)||(16305229-16305300)
chr1 (245-313)||(21466681-21466751)
chr1 (157-267)||(36566944-36567048)
chr1 (159-285)||(50424889-50425016)
chr1 (246-316)||(11430555-11430626)
chr1 (167-272)||(31074759-31074863)
chr1 (208-260)||(24436540-24436592)
chr1 (232-276)||(50308844-50308888)
[»] chr7 (69 HSPs)
chr7 (163-313)||(46517293-46517443)
chr7 (157-317)||(22189935-22190097)
chr7 (148-316)||(31502479-31502647)
chr7 (157-318)||(6442160-6442323)
chr7 (168-319)||(33008098-33008251)
chr7 (163-317)||(11824067-11824223)
chr7 (148-318)||(12263449-12263621)
chr7 (159-316)||(27888279-27888438)
chr7 (157-316)||(27949270-27949431)
chr7 (163-316)||(32205076-32205228)
chr7 (157-313)||(14795131-14795289)
chr7 (157-313)||(15242123-15242281)
chr7 (157-294)||(7775019-7775157)
chr7 (157-314)||(48374461-48374618)
chr7 (168-313)||(32212903-32213049)
chr7 (157-312)||(39254084-39254241)
chr7 (157-274)||(11692220-11692337)
chr7 (157-312)||(25686857-25687019)
chr7 (157-313)||(32178826-32178981)
chr7 (157-313)||(19422856-19423014)
chr7 (157-319)||(6580024-6580191)
chr7 (180-313)||(36845567-36845701)
chr7 (206-318)||(13919775-13919889)
chr7 (229-316)||(8073382-8073471)
chr7 (164-267)||(44350831-44350934)
chr7 (180-316)||(9648919-9649059)
chr7 (182-312)||(25092708-25092840)
chr7 (141-214)||(31874117-31874190)
chr7 (158-285)||(24539145-24539273)
chr7 (198-303)||(44510999-44511106)
chr7 (205-284)||(19494409-19494488)
chr7 (206-316)||(17354598-17354710)
chr7 (205-317)||(12270984-12271095)
chr7 (158-285)||(17749724-17749852)
chr7 (160-248)||(27320441-27320529)
chr7 (168-267)||(10933998-10934097)
chr7 (160-303)||(7459353-7459498)
chr7 (141-207)||(12167315-12167381)
chr7 (241-319)||(31874027-31874105)
chr7 (246-316)||(13919894-13919966)
chr7 (206-315)||(22786149-22786260)
chr7 (179-312)||(32605333-32605467)
chr7 (222-285)||(26703527-26703590)
chr7 (159-313)||(25428502-25428659)
chr7 (183-284)||(32055607-32055708)
chr7 (230-300)||(42466238-42466310)
chr7 (160-267)||(45909504-45909612)
chr7 (157-216)||(7774944-7775002)
chr7 (160-210)||(36845516-36845566)
chr7 (250-316)||(2520630-2520698)
chr7 (246-316)||(14759757-14759829)
chr7 (212-280)||(10477272-10477340)
chr7 (245-285)||(31959967-31960007)
chr7 (260-316)||(2520715-2520773)
chr7 (182-237)||(3855857-3855912)
chr7 (249-317)||(19840878-19840948)
chr7 (156-207)||(38065347-38065398)
chr7 (206-280)||(19840956-19841030)
chr7 (153-256)||(23564049-23564156)
chr7 (236-302)||(38065419-38065485)
chr7 (164-201)||(1316387-1316424)
chr7 (236-281)||(14759677-14759722)
chr7 (246-312)||(25428477-25428545)
chr7 (246-312)||(27320226-27320294)
chr7 (157-210)||(30742562-30742615)
chr7 (157-214)||(31628100-31628157)
chr7 (246-316)||(37549621-37549693)
chr7 (245-289)||(41508385-41508429)
chr7 (280-316)||(42863581-42863617)
[»] chr3 (70 HSPs)
chr3 (157-316)||(20493467-20493628)
chr3 (157-318)||(46450062-46450224)
chr3 (157-317)||(28529249-28529409)
chr3 (157-317)||(41451917-41452079)
chr3 (157-316)||(52123978-52124139)
chr3 (157-316)||(24734702-24734863)
chr3 (157-317)||(37776725-37776887)
chr3 (157-277)||(18427172-18427292)
chr3 (153-312)||(41387564-41387723)
chr3 (158-316)||(46160946-46161104)
chr3 (144-317)||(55452024-55452197)
chr3 (333-616)||(7129587-7129874)
chr3 (157-316)||(5452084-5452243)
chr3 (157-303)||(50156682-50156828)
chr3 (157-303)||(8825001-8825149)
chr3 (184-298)||(26310495-26310611)
chr3 (165-306)||(22604567-22604710)
chr3 (157-313)||(20791296-20791454)
chr3 (167-268)||(19345032-19345133)
chr3 (162-315)||(15790397-15790551)
chr3 (157-317)||(27243041-27243204)
chr3 (163-304)||(10948588-10948731)
chr3 (389-616)||(36280544-36280771)
chr3 (157-318)||(29755495-29755658)
chr3 (157-300)||(138778-138921)
chr3 (164-316)||(48351433-48351587)
chr3 (157-267)||(29588755-29588865)
chr3 (142-235)||(24429032-24429125)
chr3 (157-285)||(14236049-14236177)
chr3 (156-316)||(46575945-46576108)
chr3 (158-312)||(13809083-13809239)
chr3 (162-254)||(38414708-38414800)
chr3 (168-312)||(40715895-40716041)
chr3 (206-285)||(54140964-54141043)
chr3 (157-268)||(2419486-2419597)
chr3 (168-246)||(752461-752539)
chr3 (207-313)||(30624633-30624739)
chr3 (164-302)||(40702151-40702289)
chr3 (158-267)||(44844029-44844139)
chr3 (163-318)||(45515525-45515680)
chr3 (157-307)||(41707462-41707613)
chr3 (246-316)||(54140887-54140959)
chr3 (222-285)||(46237133-46237196)
chr3 (168-246)||(742025-742103)
chr3 (157-227)||(29388616-29388686)
chr3 (163-317)||(2008991-2009146)
chr3 (163-296)||(37285302-37285435)
chr3 (222-316)||(37600217-37600313)
chr3 (230-274)||(18722535-18722579)
chr3 (159-285)||(24748933-24749060)
chr3 (143-303)||(50661527-50661692)
chr3 (206-284)||(43657067-43657145)
chr3 (182-267)||(41607459-41607544)
chr3 (182-263)||(49072057-49072138)
chr3 (232-318)||(49720099-49720187)
chr3 (182-289)||(357786-357894)
chr3 (168-248)||(38138615-38138695)
chr3 (246-300)||(357874-357928)
chr3 (230-313)||(29389108-29389193)
chr3 (246-316)||(10769719-10769791)
chr3 (236-318)||(10769826-10769910)
chr3 (246-285)||(24748937-24748976)
chr3 (198-280)||(7419241-7419323)
chr3 (222-317)||(21232609-21232706)
chr3 (246-317)||(37600123-37600196)
chr3 (246-313)||(38928006-38928075)
chr3 (246-313)||(39185237-39185306)
chr3 (262-316)||(18722583-18722639)
chr3 (250-316)||(52951475-52951543)
chr3 (183-219)||(22856282-22856318)
[»] chr4 (77 HSPs)
chr4 (157-316)||(50164392-50164553)
chr4 (157-317)||(8108952-8109114)
chr4 (141-316)||(33653495-33653672)
chr4 (157-318)||(43771121-43771284)
chr4 (157-317)||(39471153-39471315)
chr4 (157-285)||(722187-722315)
chr4 (178-316)||(20225384-20225522)
chr4 (161-312)||(24834579-24834732)
chr4 (157-302)||(754602-754749)
chr4 (157-316)||(26361330-26361483)
chr4 (171-319)||(49077243-49077393)
chr4 (156-277)||(24938436-24938557)
chr4 (164-316)||(34129429-34129583)
chr4 (157-308)||(20454545-20454696)
chr4 (157-317)||(49242166-49242328)
chr4 (157-300)||(47009202-47009347)
chr4 (191-303)||(46242000-46242112)
chr4 (157-316)||(40991611-40991772)
chr4 (182-268)||(31250930-31251016)
chr4 (163-265)||(45310976-45311078)
chr4 (168-312)||(10169678-10169822)
chr4 (150-277)||(50481562-50481687)
chr4 (157-272)||(22542424-22542539)
chr4 (194-316)||(50571861-50571985)
chr4 (163-267)||(5044568-5044672)
chr4 (158-282)||(29699522-29699645)
chr4 (157-284)||(43124536-43124663)
chr4 (157-283)||(52671862-52671988)
chr4 (182-308)||(48339387-48339515)
chr4 (143-285)||(16178614-16178756)
chr4 (208-316)||(42862494-42862604)
chr4 (206-317)||(13069937-13070049)
chr4 (180-316)||(13519944-13520084)
chr4 (164-277)||(25719141-25719255)
chr4 (183-313)||(46287441-46287573)
chr4 (157-290)||(19447156-19447290)
chr4 (164-289)||(37451042-37451165)
chr4 (157-284)||(30866953-30867081)
chr4 (236-315)||(47237842-47237923)
chr4 (178-267)||(4138913-4139002)
chr4 (157-305)||(19937194-19937343)
chr4 (185-303)||(33995985-33996105)
chr4 (206-312)||(39016664-39016772)
chr4 (163-287)||(38636365-38636489)
chr4 (146-267)||(50652343-50652468)
chr4 (224-303)||(1559806-1559887)
chr4 (206-321)||(2187885-2188001)
chr4 (229-316)||(22592301-22592390)
chr4 (159-279)||(51206079-51206200)
chr4 (166-218)||(11895134-11895186)
chr4 (157-267)||(38537535-38537648)
chr4 (232-312)||(43958152-43958234)
chr4 (157-224)||(52279281-52279348)
chr4 (166-280)||(45081773-45081887)
chr4 (182-280)||(49682838-49682936)
chr4 (141-199)||(54543454-54543512)
chr4 (205-285)||(2088735-2088815)
chr4 (243-316)||(42862415-42862490)
chr4 (246-315)||(51206157-51206228)
chr4 (330-381)||(1073048-1073099)
chr4 (269-317)||(11895083-11895133)
chr4 (182-277)||(41153245-41153340)
chr4 (222-298)||(50879471-50879549)
chr4 (157-211)||(1559936-1559990)
chr4 (160-206)||(19321901-19321947)
chr4 (150-263)||(28304030-28304144)
chr4 (246-313)||(37315674-37315743)
chr4 (247-317)||(40662037-40662107)
chr4 (249-316)||(40812034-40812103)
chr4 (232-282)||(44832496-44832546)
chr4 (182-272)||(49769851-49769941)
chr4 (184-293)||(2860899-2861008)
chr4 (236-285)||(21776946-21776995)
chr4 (246-316)||(44832577-44832649)
chr4 (168-257)||(46536295-46536384)
chr4 (253-285)||(47237768-47237800)
chr4 (280-316)||(53871010-53871046)
[»] chr8 (53 HSPs)
chr8 (157-316)||(16983391-16983552)
chr8 (142-312)||(32072098-32072270)
chr8 (144-316)||(8914768-8914942)
chr8 (157-316)||(1977195-1977356)
chr8 (157-316)||(34861214-34861368)
chr8 (160-285)||(17499258-17499383)
chr8 (157-317)||(9952779-9952941)
chr8 (150-316)||(43506535-43506698)
chr8 (178-313)||(8903852-8903989)
chr8 (167-313)||(28413901-28414049)
chr8 (157-317)||(35151751-35151913)
chr8 (150-317)||(41727426-41727595)
chr8 (157-315)||(5979878-5980037)
chr8 (157-303)||(24055947-24056095)
chr8 (158-312)||(6387564-6387719)
chr8 (142-267)||(17741534-17741659)
chr8 (141-284)||(35797426-35797567)
chr8 (143-318)||(14236333-14236510)
chr8 (189-303)||(17716863-17716977)
chr8 (157-313)||(23685131-23685285)
chr8 (156-266)||(36804860-36804970)
chr8 (157-285)||(13407345-13407474)
chr8 (164-316)||(31301112-31301265)
chr8 (157-267)||(13214543-13214653)
chr8 (178-313)||(45246432-45246571)
chr8 (182-302)||(11962729-11962850)
chr8 (157-219)||(7493364-7493426)
chr8 (157-285)||(6098799-6098925)
chr8 (157-254)||(34952504-34952601)
chr8 (159-285)||(35689510-35689637)
chr8 (182-249)||(35819198-35819265)
chr8 (141-266)||(9453511-9453637)
chr8 (206-313)||(1423746-1423855)
chr8 (236-285)||(39023460-39023509)
chr8 (197-285)||(1961312-1961400)
chr8 (246-319)||(13856506-13856581)
chr8 (557-609)||(33177989-33178041)
chr8 (236-316)||(45218618-45218698)
chr8 (190-261)||(9192055-9192126)
chr8 (222-285)||(28211973-28212036)
chr8 (157-276)||(4674949-4675064)
chr8 (212-294)||(10868012-10868094)
chr8 (206-316)||(7599493-7599605)
chr8 (206-310)||(43026296-43026400)
chr8 (163-201)||(5095788-5095826)
chr8 (182-276)||(9193421-9193515)
chr8 (216-285)||(5726345-5726414)
chr8 (156-316)||(36629656-36629817)
chr8 (184-276)||(3099691-3099783)
chr8 (206-311)||(1205829-1205936)
chr8 (157-201)||(17915926-17915970)
chr8 (249-314)||(31691625-31691692)
chr8 (280-316)||(34952458-34952494)
[»] chr6 (39 HSPs)
chr6 (157-312)||(34905337-34905494)
chr6 (139-317)||(445814-445994)
chr6 (142-312)||(32122796-32122968)
chr6 (168-313)||(10133191-10133338)
chr6 (141-303)||(31116130-31116294)
chr6 (157-303)||(5106308-5106456)
chr6 (157-313)||(1392630-1392785)
chr6 (167-268)||(16852005-16852106)
chr6 (143-274)||(2675936-2676067)
chr6 (157-313)||(21987292-21987450)
chr6 (157-267)||(32112739-32112849)
chr6 (156-316)||(12753781-12753943)
chr6 (159-285)||(17144695-17144821)
chr6 (163-281)||(16187460-16187575)
chr6 (163-281)||(16187678-16187793)
chr6 (157-255)||(12780781-12780879)
chr6 (157-316)||(8441871-8442020)
chr6 (157-316)||(8450675-8450824)
chr6 (159-316)||(19090238-19090398)
chr6 (206-310)||(35128794-35128900)
chr6 (189-316)||(31443956-31444085)
chr6 (157-273)||(32598970-32599086)
chr6 (157-259)||(16436121-16436222)
chr6 (216-298)||(2931576-2931660)
chr6 (238-316)||(6531401-6531481)
chr6 (182-265)||(899943-900026)
chr6 (222-285)||(12327292-12327355)
chr6 (169-313)||(13001692-13001838)
chr6 (207-285)||(4595772-4595850)
chr6 (206-316)||(10060856-10060968)
chr6 (178-267)||(12784982-12785071)
chr6 (142-203)||(34882235-34882298)
chr6 (144-285)||(373429-373571)
chr6 (246-317)||(19090208-19090281)
chr6 (152-274)||(20128791-20128910)
chr6 (152-274)||(22203960-22204079)
chr6 (246-285)||(9940388-9940427)
chr6 (246-314)||(19737431-19737501)
chr6 (157-285)||(19737456-19737585)
[»] chr5 (59 HSPs)
chr5 (148-313)||(10141989-10142154)
chr5 (157-316)||(28490744-28490905)
chr5 (163-316)||(37455346-37455500)
chr5 (143-317)||(17537110-17537286)
chr5 (178-316)||(34368357-34368497)
chr5 (168-276)||(5413770-5413878)
chr5 (157-313)||(30325896-30326054)
chr5 (173-316)||(39246605-39246750)
chr5 (159-272)||(41105594-41105707)
chr5 (153-277)||(25710490-25710614)
chr5 (163-318)||(28223804-28223961)
chr5 (148-313)||(28090242-28090407)
chr5 (157-277)||(34384713-34384833)
chr5 (157-273)||(41330415-41330531)
chr5 (163-285)||(28434846-28434966)
chr5 (156-316)||(43405390-43405552)
chr5 (178-313)||(27592495-27592632)
chr5 (182-268)||(31885878-31885964)
chr5 (163-277)||(10950124-10950238)
chr5 (182-260)||(25919266-25919344)
chr5 (182-308)||(36337937-36338064)
chr5 (206-317)||(13456236-13456347)
chr5 (206-318)||(42224662-42224776)
chr5 (162-254)||(14553573-14553665)
chr5 (179-316)||(28155746-28155881)
chr5 (331-617)||(26132868-26133160)
chr5 (166-263)||(34479982-34480079)
chr5 (184-317)||(25630803-25630938)
chr5 (246-316)||(24915169-24915239)
chr5 (246-316)||(24991000-24991070)
chr5 (159-316)||(28611802-28611961)
chr5 (236-317)||(40971554-40971637)
chr5 (164-251)||(1923581-1923668)
chr5 (236-316)||(32309477-32309559)
chr5 (245-320)||(4959391-4959468)
chr5 (182-267)||(4714797-4714882)
chr5 (206-316)||(4959275-4959387)
chr5 (168-267)||(2525622-2525721)
chr5 (227-315)||(6263881-6263971)
chr5 (236-295)||(10253183-10253242)
chr5 (229-316)||(17700168-17700255)
chr5 (238-313)||(32050413-32050490)
chr5 (162-303)||(17434876-17435017)
chr5 (246-316)||(17568696-17568768)
chr5 (163-279)||(24915091-24915208)
chr5 (247-317)||(26072218-26072290)
chr5 (246-316)||(42224585-42224657)
chr5 (148-196)||(38607164-38607212)
chr5 (157-208)||(5465674-5465725)
chr5 (163-277)||(24990924-24991039)
chr5 (222-277)||(25564033-25564088)
chr5 (246-317)||(6263995-6264068)
chr5 (160-266)||(10666713-10666819)
chr5 (241-303)||(13456174-13456236)
chr5 (143-197)||(28434932-28434986)
chr5 (182-219)||(4427338-4427375)
chr5 (236-281)||(17568803-17568848)
chr5 (156-215)||(25002026-25002086)
chr5 (163-199)||(41511772-41511808)
[»] chr2 (61 HSPs)
chr2 (157-317)||(26767783-26767945)
chr2 (157-317)||(12989187-12989349)
chr2 (163-312)||(9470082-9470233)
chr2 (157-312)||(6980142-6980299)
chr2 (157-313)||(45554567-45554717)
chr2 (181-317)||(18511255-18511393)
chr2 (157-315)||(38464161-38464321)
chr2 (158-318)||(11539418-11539583)
chr2 (160-316)||(36471863-36472021)
chr2 (162-285)||(44274264-44274387)
chr2 (157-300)||(10981531-10981676)
chr2 (183-312)||(16719478-16719609)
chr2 (169-316)||(17188064-17188211)
chr2 (157-317)||(32856157-32856323)
chr2 (170-317)||(35316436-35316583)
chr2 (158-303)||(30718350-30718496)
chr2 (185-316)||(2476533-2476664)
chr2 (150-312)||(3804585-3804750)
chr2 (163-318)||(19639088-19639245)
chr2 (163-318)||(19837681-19837838)
chr2 (164-277)||(15884471-15884580)
chr2 (144-320)||(31395453-31395632)
chr2 (168-313)||(34142172-34142319)
chr2 (205-319)||(15508908-15509024)
chr2 (147-247)||(7919280-7919382)
chr2 (160-318)||(24895291-24895450)
chr2 (206-313)||(42182889-42182998)
chr2 (172-317)||(28898073-28898221)
chr2 (164-267)||(27494480-27494583)
chr2 (163-316)||(12098894-12099050)
chr2 (163-317)||(24497188-24497344)
chr2 (238-310)||(31494211-31494283)
chr2 (209-317)||(37228494-37228605)
chr2 (206-318)||(4964744-4964858)
chr2 (247-313)||(19427359-19427425)
chr2 (157-308)||(37652267-37652420)
chr2 (170-219)||(4552875-4552924)
chr2 (167-267)||(43414403-43414503)
chr2 (157-267)||(25238299-25238410)
chr2 (246-316)||(20951603-20951673)
chr2 (168-319)||(25730472-25730625)
chr2 (182-317)||(32701466-32701603)
chr2 (246-317)||(42183003-42183076)
chr2 (236-285)||(1107068-1107117)
chr2 (222-316)||(1110195-1110291)
chr2 (246-316)||(37719831-37719903)
chr2 (157-312)||(4602890-4603046)
chr2 (157-318)||(33678138-33678300)
chr2 (159-234)||(472187-472262)
chr2 (164-219)||(14489568-14489623)
chr2 (246-318)||(28898029-28898103)
chr2 (180-267)||(30849285-30849372)
chr2 (236-316)||(41805877-41805959)
chr2 (182-313)||(45270603-45270735)
chr2 (230-316)||(2122792-2122880)
chr2 (242-303)||(25666700-25666763)
chr2 (161-267)||(38104296-38104403)
chr2 (247-301)||(21447219-21447273)
chr2 (280-317)||(19193496-19193533)
chr2 (236-313)||(19193604-19193683)
chr2 (240-317)||(41546133-41546211)
[»] scaffold0018 (1 HSPs)
scaffold0018 (157-280)||(27847-27970)
[»] scaffold0543 (2 HSPs)
scaffold0543 (174-285)||(9694-9805)
scaffold0543 (142-197)||(9673-9728)
[»] scaffold0492 (2 HSPs)
scaffold0492 (174-285)||(11240-11351)
scaffold0492 (142-197)||(11219-11274)
[»] scaffold0204 (1 HSPs)
scaffold0204 (182-277)||(26909-27004)
[»] scaffold0838 (1 HSPs)
scaffold0838 (189-285)||(2252-2346)
[»] scaffold0832 (1 HSPs)
scaffold0832 (189-285)||(2283-2377)
[»] scaffold0155 (1 HSPs)
scaffold0155 (222-277)||(35632-35687)
[»] scaffold0194 (1 HSPs)
scaffold0194 (160-218)||(8436-8494)


Alignment Details
Target: chr1 (Bit Score: 493; Significance: 0; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 9 - 617
Target Start/End: Complemental strand, 41958389 - 41957772
Alignment:
Q  9 agcagcacagaaccaaataacatttagggagttttgaaccttatacgggaaactccctaaactgataaatatgtagaagaatcttgcctttgaaaacagt 108  Q
    |||| |||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  41958389 agcaacacaaaaccaaataacatttagggagttttgaaccttatgcaggaaactccctaaactgataaatatgtagaagaaccttgcctttgaaaacaat 41958290  T
Q  109 agagaaatcaagccagctgaaaataaaacaccaaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtcta 208  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  41958289 agagaaattaagccagctgaaaataaattaccaaagaggaatgctaacaacactctttctaatactcactctcttattggtttaaatcactgtgggtcta 41958190  T
Q  209 cactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactag 308  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41958189 cactttgaaaattgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcttgagagtgttgaaaagtgagtgttactag 41958090  T
Q  309 cattcctcaacacgaaattcaaccataaacgtcacatttaacaaaaagatggtcaatgtcctcattctcaccatagtttg--------ccttgctcagta 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||    
T  41958089 cattcctcaacacgaaattcaaccataaacgtcacatttaacaaaaagatggtcaatgtcctcattctcaccacagtttgtcgtgcaaccttgctcagta 41957990  T
Q  401 gctgtaataatgctcatatgcgataaattatcctttgtcggcactctattccgcaaaagcctccaagcaaaaataaacatctatagaggaataacc-ttt 499  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  41957989 gctgcaataatgctcatatgcgataaattatcctttgtcggcactctattccgcaaaagcctccacgcaaaaataaacatctatagaggaataacctttt 41957890  T
Q  500 agagagacaaattggtgagaattttggtgctgattgatgtcaacttctgtcaattttttgtaagcactacttacagtataacaattagatgaatgcaaat 599  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  41957889 agacagacaaattggtgagaattttggtgctgattgatatcaacttctgtcaattttttgtaagcactacttacagtataataattagatggatgcaaat 41957790  T
Q  600 gccaaatccaatgatcag 617  Q
    ||||||||||||||||||    
T  41957789 gccaaatccaatgatcag 41957772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 170 - 316
Target Start/End: Complemental strand, 2225369 - 2225223
Alignment:
Q  170 atactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatg 269  Q
    ||||||| | |||||||||||||||||| ||| ||||||||||||| |||| |||||| |||||| |||||||||||||||||||||||||||||||| |    
T  2225369 atactcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtgggacatacattgatttcatccaataaaag 2225270  T
Q  270 agtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||    
T  2225269 agtgggtgctagagagtgttgaaaattgagtgttactagcattcctc 2225223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 316
Target Start/End: Original strand, 6133653 - 6133807
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| |||||||||||||||| ||||||||||| || |||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||    
T  6133653 ctctctaatactcactctcttattggtttaa-tcattgtgggtgtagactttgaaaattgaacccacacaatatggtgggacatatattgatttcatcca 6133751  T
Q  263 ataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||| | |||||||||||||||  |||||||||||||||||| ||||||||||||    
T  6133752 ataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcattcctc 6133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 157 - 276
Target Start/End: Complemental strand, 33193208 - 33193089
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  33193208 aacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacatacattgattt 33193109  T
Q  257 catccaataaatgagtgagt 276  Q
    |||||||||||| |||||||    
T  33193108 catccaataaataagtgagt 33193089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 156 - 316
Target Start/End: Original strand, 26980283 - 26980445
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||| | || | |||||||| ||||| | |||||||||||||||||||||||||||    
T  26980283 caacactctctataatactcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaaatggtgggacatacattgatt 26980382  T
Q  256 tcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||||  ||||||||  |  ||||||||||||||||||||||||  |||||||||||    
T  26980383 tcatccaataatagagtgagtattagagagagtgttgaaaagtgagtgttgttagcattcctc 26980445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 157 - 313
Target Start/End: Original strand, 19101623 - 19101781
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| | |||||||||||||||||||||  | |||||||||||||||  |||| | || ||| |||||||||||||||||||||    
T  19101623 aacactctctctaatactcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggacatacattgattt 19101722  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||||||||  |||||||||  |||||||| |||| |||||||||    
T  19101723 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 19101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 11987784 - 11987623
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| || |||||| ||||||||| ||||    
T  11987784 aacactctttctaatatccactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgcactaagtggtggaacatacattaattt 11987685  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||||||| | | || |  ||||||||||||||||||||||||  ||| |||||||    
T  11987684 catccaataaatgaataaatgttggagagagtgttgaaaagtgagtgttgttagtattcctc 11987623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 141 - 285
Target Start/End: Complemental strand, 29673649 - 29673505
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtg 240  Q
    |||||| ||||||||||||||||||||||||||||| | | |||||||||||||| ||||| | ||||||||||||||| |||| |  ||||||||||||    
T  29673649 aaagagtaatgctagcaacactctctctaatactcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtg 29673550  T
Q  241 ggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||| |||||||| ||||||||||  | |||||| |||||||    
T  29673549 ggacatatattgattttatccaataaaataatgagtgttagagag 29673505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 142 - 311
Target Start/End: Complemental strand, 35337033 - 35336868
Alignment:
Q  142 aagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgg 241  Q
    ||||| |||| || ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| |  ||||| ||||||| |||||| |||||     
T  35337033 aagagtaatgttatcaacactctctctaatactcgttctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggtg- 35336935  T
Q  242 gacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcat 311  Q
       | |||||||||||||||||||||  | ||||||||||||  |||||||||||||||||| |||||||    
T  35336934 ---agacattgatttcatccaataaaataatgagtgctagaggatgttgaaaagtgagtgttgctagcat 35336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 148 - 316
Target Start/End: Complemental strand, 44272085 - 44271915
Alignment:
Q  148 aatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacata 247  Q
    ||||||| ||||||||| ||||||||||| | | |||||| ||||||||||||| | ||||||||||||||| ||||||  || |||||||||| |||||    
T  44272085 aatgctaacaacactctttctaatactcatttttttattgatttaaatcattgttgttctacactttgaaaattgaacctacaaaaaatggtggaacata 44271986  T
Q  248 cattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||||| |||||||  ||| ||||||  |||||||||| |||||||  |||| ||||||||||||    
T  44271985 cattgatttcattcaataaaatagtaagtgctaaagagagtgtttaaaagtggatgttgctagcattcctc 44271915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 30678935 - 30679051
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||||||||||| |    
T  30678935 cactctctctaacactcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaacccacacaaagtggtgggacatacattgatttta 30679034  T
Q  259 tccaataaatgagtgag 275  Q
    |||| | || |||||||    
T  30679035 tccattgaaagagtgag 30679051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 931532 - 931371
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| | ||||||| ||| ||| |||||||||||||||||||||||| || | |||||||| ||||||| || |||||| |||||||||||||| ||     
T  931532 aacactttttctaatattcactcttttattggtttaaatcattgtgggtgtatattttgaaaattgaacccacaaaaaatgatgggacatacattgcttc 931433  T
Q  257 catccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||| ||||||| ||||||||  |||||  || ||||||||||||||||| ||||||||||||    
T  931432 cattcaataaaagagtgagtattagagatagagttgaaaagtgagtgttgctagcattcctc 931371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 164 - 313
Target Start/End: Original strand, 8741252 - 8741405
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||||||| ||||||||| ||||||||||||||| || || |||||||||| ||||||| |||||| | ||| ||||||||||||||||||||||    
T  8741252 tctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaattagtgagacatacattgatttcatccaa 8741351  T
Q  264 taaatgagtgagtgct----agagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||||  |||||   ||    ||||||| |||||||||||||||| |||||||||    
T  8741352 taaaaaagtgaccactaaagagagagttttgaaaagtgagtgttgctagcattc 8741405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 157 - 312
Target Start/End: Original strand, 10659791 - 10659948
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| |||||||||| || ||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||| |||| |||||| |||||||||    
T  10659791 aacactttctctaatac-cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctacacaaagtggtcggacatccattgattt 10659889  T
Q  257 catccaat-aaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    ||||| || |||  |||||||| |  ||||||| |||||||||||||||| ||| ||||    
T  10659890 catcccataaaaaaagtgagtgttagagagagtattgaaaagtgagtgttgctaacatt 10659948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 157 - 312
Target Start/End: Complemental strand, 8899172 - 8899015
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||  |||||||||||||| ||||||| ||||||  |||||||||||| || ||||    
T  8899172 aacactctctctaatactcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccacacaaaggggtgggacatacctttattt 8899073  T
Q  257 catccaataaatgagtgagtgctaga--gagtgttgaaaagtgagtgttactagcatt 312  Q
    |||| ||| ||  ||  |||| ||||  || |||||||||||||||||| ||| ||||    
T  8899072 catctaattaaatagcaagtgttagagggaatgttgaaaagtgagtgttgctaacatt 8899015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 165 - 316
Target Start/End: Original strand, 28218078 - 28218231
Alignment:
Q  165 ctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaat 264  Q
    |||||||||||| | |||||||  ||||||| | ||||| ||||||||||||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  28218078 ctctaatactcactatcttattaatttaaattactgtggttctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaat 28218177  T
Q  265 aaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||| |||||| ||||  |||||| |||||||| |||||||| ||| | ||||||    
T  28218178 aaaagagtgaatgctaaagagagggttgaaaaatgagtgttgctaaccttcctc 28218231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 6325858 - 6325994
Alignment:
Q  180 tcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct 279  Q
    |||| |||||||| |||||||||||| |||||||||||||  |||| | |||||||||||||||||||||||||||| ||  ||||||||||||| |  |    
T  6325858 tcttgttggtttacatcattgtgggtttacactttgaaaaa-gaactcacacaaaatggtgggacatacattgattttatttaataaatgagtgattatt 6325956  T
Q  280 agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||||| ||||||||| ||| |||| ||||||||    
T  6325957 agagagtgttcaaaagtgagcgttgctagtattcctca 6325994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 156 - 285
Target Start/End: Original strand, 32211805 - 32211934
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    ||||||| ||| ||||  ||| |||||||||||||||||||||||||||||||||| || |||| ||||| | |||||| | || |||||||||||||||    
T  32211805 caacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacacaaagtagttggacatacattgatt 32211904  T
Q  256 tcatccaataaatgagtgagtgctagagag 285  Q
    ||||| |||||| ||||||||||| |||||    
T  32211905 tcatctaataaaagagtgagtgctggagag 32211934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 3872681 - 3872818
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct-- 279  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||  |||||| ||||| |||||| |||||||| ||  |||| | |||||||||||      
T  3872681 ttattggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacatatattgattt-atttaatagaagagtgagtgctag 3872779  T
Q  280 agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  3872780 agagagtgttgaaaagtgagtgttgctagcattcttcaa 3872818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 313
Target Start/End: Complemental strand, 22540502 - 22540368
Alignment:
Q  181 cttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct- 279  Q
    |||||||||||||||||||| || ||||||||||| |||  |||| | || ||| ||||||||||||||||||||||||||||||||  ||||||||||     
T  22540502 cttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 22540403  T
Q  280 -agagagtgttgaaaagtgagtgttactagcattc 313  Q
     |||||||||  |||||||| |||| |||||||||    
T  22540402 aagagagtgtgcaaaagtgaatgttgctagcattc 22540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 41948168 - 41948287
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||| | ||||||||||||| ||||||  |||||| |||| | | ||||||||||||    
T  41948168 aacactctctctaacactcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggtagaatatacattgattt 41948267  T
Q  257 catccaataaatgagtgagt 276  Q
     |||||||||| ||||||||    
T  41948268 tatccaataaaagagtgagt 41948287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 25543497 - 25543337
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| | || ||| |||  || |  |||  |||||| |||||||||||| ||||||||    
T  25543497 aacactctctctaatactcactatcttattggtttaaatcattgtgaggctgcacattgggaa-tatacctacacaaagtggtgggacatatattgattt 25543399  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| |||||| |||| |||| |  |||||||||| ||||||||||||| ||||||||||||    
T  25543398 catcaaataaaagagtaagtgttagagagagtgtttaaaagtgagtgttgctagcattcctc 25543337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 145 - 310
Target Start/End: Original strand, 4578585 - 4578752
Alignment:
Q  145 aggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccc-cacaaaatggtggg 242  Q
    |||| ||||||||||||||||  ||| || |  |||||| |||| | |||||| |||||||| ||||||||| |||  | ||||| || ||| |||||||    
T  4578585 aggagtgctagcaacactctccgtaacacccgctctctttttgggtgaaatcaatgtgggtcctacactttggaaatgggaccccgcataaagtggtggg 4578684  T
Q  243 acatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagca 310  Q
    || ||||||||||||| |||||||| ||||||||| ||||||||||||||||| ||||||| ||||||    
T  4578685 acctacattgatttcacccaataaaagagtgagtgttagagagtgttgaaaagagagtgttgctagca 4578752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 15523364 - 15523210
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||| |    |||||||||||||||||||| || ||||||||||  |||  |||| | || ||| |||||||||||||||||||||    
T  15523364 aacactctctctaatactaa----cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgattt 15523269  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||||||||  |||||||||  |||||||| ||||  ||||||||    
T  15523268 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgatagcattc 15523210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 15531358 - 15531204
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||| |    |||||||||||||||||||| || ||||||||||  |||  |||| | || ||| |||||||||||||||||||||    
T  15531358 aacactctctctaatactaa----cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgattt 15531263  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||||||||  |||||||||  |||||||| ||||  ||||||||    
T  15531262 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgatagcattc 15531204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 159 - 277
Target Start/End: Original strand, 45179270 - 45179388
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    |||||||||||||||||| | |||||||  ||||| | ||||||||| ||||||||||||| ||||||| |||||| || ||| |||||||||||||| |    
T  45179270 cactctctctaatactcattttcttattaatttaagttattgtgggtttacactttgaaaattgaaccctcacaaagtgatggaacatacattgatttta 45179369  T
Q  259 tccaataaatgagtgagtg 277  Q
    | |||||||||| ||||||    
T  45179370 ttcaataaatgaatgagtg 45179388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 31866488 - 31866368
Alignment:
Q  142 aagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgg 241  Q
    ||||| |||| |||||| ||||||| ||||||||| | ||||||| |||||||||||||||| | |||||||| |||| ||||||  || ||||| ||||    
T  31866488 aagagtaatgttagcaatactctctttaatactcactttcttattagtttaaatcattgtggat-tacactttaaaaattgaaccttcaaaaaatagtgg 31866390  T
Q  242 gacatacattgatttcatccaa 263  Q
    ||||||||||||||||||||||    
T  31866389 gacatacattgatttcatccaa 31866368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 163 - 285
Target Start/End: Complemental strand, 15928707 - 15928585
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| ||| |||||||||||||||| |||  |||||||| |||||||  |||| | |||||||||||| |||||||||  ||| |||| |    
T  15928707 ctctctaatactcactcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcacacaaaatggtgagacatacatgaattccatcaa 15928608  T
Q  263 ataaatgagtgagtgctagagag 285  Q
    ||||| ||||| |||||||||||    
T  15928607 ataaaagagtgggtgctagagag 15928585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 51732428 - 51732290
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| || |||||||||| | ||| | || ||| | |||| | ||||||| |||||||| ||    
T  51732428 tctctaatactcactcttttattggtttaaattattgtgggtttatactttgaaaattaaactcacataaagtagtggaaaatacattaatttcatcaaa 51732329  T
Q  264 taaatgagtgagtgctagagagtgttgaaaagtgagtgt 302  Q
    ||||  ||||| || ||||||| ||||||||||||||||    
T  51732328 taaaaaagtgaatgttagagagcgttgaaaagtgagtgt 51732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 160 - 317
Target Start/End: Complemental strand, 11135895 - 11135735
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    ||||||||||  ||||| ||| ||||||| | |||||| ||| || | ||||||||| |||  |||||| || ||| |||||||||||||||||||||||    
T  11135895 actctctctagcactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttca 11135796  T
Q  259 tccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
     ||||||||  ||||||||||||  |||||| | ||||| ||||||| |||||||||||||    
T  11135795 cccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctca 11135735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 206 - 312
Target Start/End: Original strand, 41095680 - 41095788
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||||||||||||  |||||| |||| | || |||||||||||||||||||| ||||||||||||||||||||  |||||||| | ||||| |||||||    
T  41095680 ctacactttgaaaatggaacccacacagagtgatgggacatacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgtt 41095779  T
Q  304 actagcatt 312  Q
     ||||||||    
T  41095780 gctagcatt 41095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 49730995 - 49730860
Alignment:
Q  184 attggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg--ctag 281  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||| | ||| |||||| |||  ||| ||| |||||| |||||||||   |||    
T  49730995 attggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtgagtgttatag 49730896  T
Q  282 agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||| | |||| ||| ||  |||||||||    
T  49730895 agagtgttgaagaatgagcgttgctgtcattcctca 49730860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 11430550 - 11430437
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  |||||| || ||| ||||||||||||||||||||||| |||||||| |||||||||||||  |||||| | ||||| |||||||    
T  11430550 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgtt 11430451  T
Q  304 actagcattcctca 317  Q
      ||||||||||||    
T  11430450 gttagcattcctca 11430437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 32848654 - 32848767
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||||||||||||  ||| || || ||| |||||||||||||| |||||||| |||||||| |||||||||||  |||||||||| ||||| |||||||    
T  32848654 ctacactttgaaaatggaatccacataaagtggtgggacatacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgtt 32848753  T
Q  304 actagcattcctca 317  Q
      ||||||||||||    
T  32848754 gttagcattcctca 32848767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 37552977 - 37553099
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||   ||||| |  ||| || ||||||| ||||| ||||||||||    
T  37552977 ctctttaatactcactctcttattgatttaaatcattgtggatctacactttgaaaataaaacccactaaaagtgatgggacaaacattaatttcatcca 37553076  T
Q  263 ataaatgagtgagtgctagagag 285  Q
    ||||   ||| ||||||||||||    
T  37553077 ataagaaagtaagtgctagagag 37553099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 41918104 - 41917995
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagaga--gtgttgaaaagtgagtgtt 303  Q
    ||||||||||||||  ||| || || ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||  ||| | ||||| |||||||    
T  41918104 ctacactttgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagggtgctcaaaagagagtgtt 41918005  T
Q  304 actagcattc 313  Q
     |||||||||    
T  41918004 gctagcattc 41917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 180 - 312
Target Start/End: Original strand, 1093118 - 1093250
Alignment:
Q  180 tcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct 279  Q
    ||||||| ||||||||||||||||  |||||||||| |||   ||| |  ||||| |||||| |||||||||||||||||| |||||| ||||| |||||    
T  1093118 tcttattagtttaaatcattgtggaactacactttggaaatataactcatacaaagtggtggaacatacattgatttcatctaataaacgagtgcgtgct 1093217  T
Q  280 agagagtgttgaaaagtgagtgttactagcatt 312  Q
    | |||||||  |||| | |||||| ||||||||    
T  1093218 aaagagtgtgcaaaaataagtgttgctagcatt 1093250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 33114129 - 33114030
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| ||  ||||| | | |||||||||||||||||| ||| ||||||||||||||| ||||||  || |||||||||||||||||| ||||||    
T  33114129 aacactctctataggactcacttttttattggtttaaatcattctggatctacactttgaaaattgaacctacataaaatggtgggacatacaatgattt 33114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 178 - 317
Target Start/End: Complemental strand, 37525666 - 37525527
Alignment:
Q  178 tctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    ||||||||| |||||||||||||| | |||| |||||||||| ||||||| || |||||||||| |||||||| | ||| ||||||| || |||||| ||    
T  37525666 tctcttattagtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatgaaagagtgaatg 37525567  T
Q  278 ctagagagtgttgaaaagtgagtgttactagcattcctca 317  Q
     |||||| |  | |||| ||||||||  || |||||||||    
T  37525566 ttagagaatactcaaaaatgagtgttgttaacattcctca 37525527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 50539257 - 50539162
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    ||||| ||||||||||||| | |||||||||  ||||| ||||||| || ||| |||||| |||||| |||||||||||||||||| |||||||||    
T  50539257 ttattagtttaaatcattgcgtgtctacactgagaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtgagtg 50539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 43851136 - 43851220
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagagt--gttgaaaagtgagtgttactagcattcctcaa 318  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||  | | ||||| ||||||| ||| ||||||||||    
T  43851136 tggtgggacatacattgatttcacccaataaatgagtgagtactagagagtgcgcttaaaagagagtgttgctaacattcctcaa 43851220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 24911588 - 24911480
Alignment:
Q  190 ttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgtt 289  Q
    ||||||||||| |  |||| |||||| |||   ||||| || ||| ||||||||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  24911588 ttaaatcattgcgtatctatactttggaaataaaacccacaaaaagtggtgggacatacatggatttcatcgaataaaagaatgagtgctagagagtgtt 24911489  T
Q  290 gaaaagtga 298  Q
     ||||||||    
T  24911488 caaaagtga 24911480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 39039470 - 39039537
Alignment:
Q  250 ttgatttcatccaataaatgagtgagtgctaga--gagtgttgaaaagtgagtgttactagcattcct 315  Q
    |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||| |||||||||||    
T  39039470 ttgatttcatccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcattcct 39039537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 14094072 - 14094184
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  |||||| || ||| ||||||||||||||||||||||| ||||||||  ||||||||||  |||||||||| |||||  | |||     
T  14094072 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctggagagagtgttcaaaagataatgtc 14094171  T
Q  304 actagcattcctc 316  Q
     ||||||||||||    
T  14094172 gctagcattcctc 14094184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 303
Target Start/End: Complemental strand, 27570383 - 27570235
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||| | | ||| | ||||||| ||| |||||||||||||| |||||||| |||| | ||| | |||||| ||||||||||||  || ||||    
T  27570383 aacactctctctcaaattcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaaattggtgggacatatcttaattt 27570284  T
Q  257 catccaataaatgagtgagtg--ctagagagtgttgaaaagtgagtgtt 303  Q
    || |||||||| || ||||||    |||||||||| |||||||| ||||    
T  27570283 caaccaataaaagaatgagtgtcagagagagtgttaaaaagtgactgtt 27570235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 284
Target Start/End: Complemental strand, 28110019 - 28109899
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtggg-tctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    ||||||||||||| | | ||||||| | |||||||| | || ||||||||||||||   |||||| || |||||||||| |||| ||||||||||| |||    
T  28110019 tctctaatactcacttttttattggatgaaatcattctaggatctacactttgaaatg-gaacccacataaaatggtggaacatgcattgatttcaccca 28109921  T
Q  263 ataaatgagtgagtgctagaga 284  Q
    |||||  |||||||||||||||    
T  28109920 ataaaaaagtgagtgctagaga 28109899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 39974222 - 39974336
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||   ||| ||||||      |||||||  |||||||||||| |||| |||||||||    
T  39974222 aacattctttctaatactcactctcttattggtttaaatcattgtaaatctgcacttt------tgaacccatacaaaatggtggaacatccattgattt 39974315  T
Q  257 catccaataaatgagtgagtg 277  Q
    |||| ||||||| || |||||    
T  39974316 catctaataaataagagagtg 39974336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 15468378 - 15468258
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| |||| |||||| | ||| |||||  ||||||| |||||||||||||||| |||||| ||||||| |||||| |  || ||||||||||||||     
T  15468378 aacactatctcaaatacttactcttttattaatttaaattattgtgggtctacactatgaaaattgaacccacacaaagtaatgagacatacattgattc 15468279  T
Q  257 catccaataaatgagtgagtg 277  Q
     ||  |||||| |||||||||    
T  15468278 tatttaataaaagagtgagtg 15468258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 175 - 315
Target Start/End: Complemental strand, 46335237 - 46335092
Alignment:
Q  175 caatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataa---atgag 271  Q
    |||||||||||   |||||||||||||||||||| || |||||||   ||| |  ||||| |||| ||| ||| ||||||||||||||||||   | |||    
T  46335237 caatctcttataaatttaaatcattgtgggtctatacattgaaaatataactctgacaaagtggtaggatatagattgatttcatccaataaaagaagag 46335138  T
Q  272 tgagtgctag--agagtgttgaaaagtgagtgttactagcattcct 315  Q
    ||||||||||  |||||||| |||||||||  || |||||||||||    
T  46335137 tgagtgctagaaagagtgttcaaaagtgaggtttgctagcattcct 46335092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 39019648 - 39019572
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||||||||||| |||||||  |||||  ||  |||||||||||||||| ||||||| ||||||||||||    
T  39019648 tggtgggacatacattgatttcacccaataa--gagtgtttg--agagagtgttgaaaagagagtgttgctagcattcctc 39019572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 47644310 - 47644399
Alignment:
Q  150 tgctagcaacactctctct--aatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatg 237  Q
    ||||| ||||||||||| |  |||||||  |||||||||| ||||||||||||||||| ||||| |||||||  |||||| |||||||||    
T  47644310 tgctaacaacactctcttttaaatactcgctctcttattgatttaaatcattgtgggtttacacattgaaaatagaacccacacaaaatg 47644399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 277
Target Start/End: Complemental strand, 15661049 - 15660931
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||||| ||||| ||| ||||||| |||||||| ||||  || |||| |||| |||   ||||| || ||| ||||||||||| |||||||||    
T  15661049 acactctctctaacactcactctattattgggttaaatcaatgtg--tcatacattttggaaataaaacccgcataaagtggtgggacatgcattgattt 15660952  T
Q  257 catccaataaatgagtgagtg 277  Q
     |||||||||| |||||||||    
T  15660951 tatccaataaaagagtgagtg 15660931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 41095675 - 41095603
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||| ||||||||| ||||||||||||  |||||| | ||||| ||||||| ||||||||||||    
T  41095675 tacattgatttcacccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 41095603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 743551 - 743467
Alignment:
Q  183 tattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    |||| |||||||||||||| |||||  | |||||||| | |||  ||||||| || ||| |||||||||||||||||||||||||    
T  743551 tatttgtttaaatcattgtaggtctctattttgaaaattaaacttccacaaagtgatggaacatacattgatttcatccaataaa 743467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 12767356 - 12767412
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaa 219  Q
    |||||||||||||| ||| |||||||||||||||||| || ||||||||||| ||||    
T  12767356 ctctctaatactcactcttttattggtttaaatcattatgagtctacactttaaaaa 12767412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 13114692 - 13114820
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||||| ||||| | ||| ||||| |||||||| |||||||  |||| |||| |||  ||| ||  | ||| |||||||||||| ||||||||    
T  13114692 acactctctctaacactcactatctcattgggttaaatcaatgtgggttatacattttggaaatggaatccatataaagtggtgggacatatattgattt 13114791  T
Q  257 catccaataaatgagtgagtgctagagag 285  Q
     ||| |||||| ||||||||| |||||||    
T  13114792 tatctaataaaagagtgagtgttagagag 13114820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 18157117 - 18157034
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||||||||||| |||||||||||||||  |||| ||| |  |||||||||||||||| ||||||  |||||||| ||||    
T  18157117 tggtgggacatacattaatttcatccaataaaaaagtgggtgttagagagagtgttgaaaagagagtgtccctagcatttctca 18157034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 39499529 - 39499430
Alignment:
Q  180 tcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct 279  Q
    ||||||||  |||||||||||||| |||||| |||||||| ||||| | || ||| || |  ||||||||||||||| ||| |||||| |||||||||||    
T  39499529 tcttattgaattaaatcattgtggatctacattttgaaaattgaactcacaaaaagtgatatgacatacattgattttatctaataaa-gagtgagtgct 39499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 157 - 313
Target Start/End: Original strand, 33059915 - 33060072
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| | |||| ||| || ||||||||||||||||| ||||||| || |||||||| |||| | ||||| || | | |||| |||||| | || ||||    
T  33059915 aacactttttctagtacccactctcttattggtttaaaacattgtgagtgtacactttaaaaattaaacccacagagagtggt-ggacatgctttaattt 33060013  T
Q  257 catccaataaatgagtgagtgctagaga--gtgttgaaaagtgagtgttactagcattc 313  Q
    ||||||||||| |||||| || || |||  || | ||||||||||| || |||||||||    
T  33060014 catccaataaaagagtgactgttaaagaatgtatagaaaagtgagtattgctagcattc 33060072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 44739197 - 44739115
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||||||||| ||||||  ||| ||| |||||||||||||  |||||||| ||||| ||||||| ||| ||||||||    
T  44739197 tggtgggacatacattaatttcactcaagaaaagagtgagtgctagagagagtgttcaaaagagagtgttgctaacattcctc 44739115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 11135853 - 11135926
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagagagtgt--tgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||  | ||||| ||||||| ||||||| |||||    
T  11135853 tacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcatccctca 11135926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 28941980 - 28941870
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| ||||| | ||| |||||||||| ||||| | | ||||| || | |||| |||||  |||||| || || ||||||||||||||| | ||||    
T  28941980 aacactctatctaacattcactctcttattgatttaagtaaatgtggatccatacttagaaaatggaacccacataatatggtgggacatacaataattt 28941881  T
Q  257 catccaataaa 267  Q
    |||||||||||    
T  28941880 catccaataaa 28941870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 29673748 - 29673678
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacac 211  Q
    |||||| |||||||| |||||||||||||||| ||| | | |||||||||||||| ||||| | |||||||    
T  29673748 aaagagtaatgctagtaacactctctctaatattcacttttttattggtttaaataattgtagttctacac 29673678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 13388403 - 13388331
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||||||||||  |||||||| |  ||||||| || ||||| ||||||| ||||||||||||    
T  13388403 tacattgatttcatccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcattcctc 13388331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 16948558 - 16948603
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctac 209  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||    
T  16948558 tctctaatactcactctcttattgatttaaatcattgtggatctac 16948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 9165381 - 9165299
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| |||||||||||||||||| |||||||| |||||||||| ||  |||||| | ||||| ||||||   |||||||||||    
T  9165381 tggtaggacatacattgatttcacccaataaaagagtgagtgcaagatagagtggtcaaaagagagtgtggatagcattcctc 9165299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 11851963 - 11851916
Alignment:
Q  274 agtgctagagagtgttgaaaagtgagtgttactagcattcctcaacac 321  Q
    |||| ||||||||||| |||||||| |||| |||||||||||||||||    
T  11851963 agtgttagagagtgttcaaaagtgaatgttgctagcattcctcaacac 11851916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 13388440 - 13388483
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgct 279  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||    
T  13388440 tggtgagacatacattgatttcacccaataaaagagtgagtgct 13388483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 545 - 616
Target Start/End: Original strand, 16305229 - 16305300
Alignment:
Q  545 tctgtcaattttttgtaagcactacttacagtataacaattagatgaatgcaaatgccaaatccaatgatca 616  Q
    ||||||||||| |||||||||| ||| |||  |||| | | ||||| |||||||||||||| ||||||||||    
T  16305229 tctgtcaatttgttgtaagcacaactaacataataagactgagatgtatgcaaatgccaaacccaatgatca 16305300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 21466681 - 21466751
Alignment:
Q  245 atacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||||| |||||||||||||||||  ||||||||||  |||||||||  |||||||| |||| |||||||||    
T  21466681 atacactgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 21466751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 36567048 - 36566944
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| ||| |||||      ||| ||| ||| |||||||||||||||  ||||||  | ||| || || |||||||||||||||    
T  36567048 aacacactctctaatactcactctattatt------aataattctggatctacactttgaaaatagaacccaaataaagtgatgagacatacattgattt 36566955  T
Q  257 catccaataaa 267  Q
    |||||||||||    
T  36566954 catccaataaa 36566944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 50424889 - 50425016
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    |||||||||||| | ||| | | ||||||| |||||||| |||||||| ||||||||| |||  ||||   || ||| |||||||  ||  ||||||||     
T  50424889 cactctctctaacattcacttttttattgggttaaatcaatgtgggtcatacactttggaaatggaacttacataaagtggtggggtatggattgatttt 50424988  T
Q  258 atccaataaatgagtgagtgctagagag 285  Q
    |||||||||| ||||||||| |||||||    
T  50424989 atccaataaaagagtgagtgttagagag 50425016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 11430555 - 11430626
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||| |||| |||||||| |||||||||||  |||||||| | ||||| ||||||| ||||||||||||    
T  11430555 tacattgaattca-ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 11430626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 272
Target Start/End: Complemental strand, 31074863 - 31074759
Alignment:
Q  167 ctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataa 266  Q
    ||||||| || |||||||||||| ||| |||||||||||||||| ||||||||  ||| |  || ||| || | ||||||  |||||||||||| |||||    
T  31074863 ctaatacccactctcttattggtctaa-tcattgtgggtctacattttgaaaatagaatcaacataaagtgttaggacatgtattgatttcatcaaataa 31074765  T
Q  267 atgagt 272  Q
    | ||||    
T  31074764 aagagt 31074759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 24436540 - 24436592
Alignment:
Q  208 acactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatc 260  Q
    ||||||||||||  |||||| || ||| |||||||| ||||||||||||||||    
T  24436540 acactttgaaaatagaacccacataaagtggtgggatatacattgatttcatc 24436592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 50308844 - 50308888
Alignment:
Q  232 aaaatggtgggacatacattgatttcatccaataaatgagtgagt 276  Q
    |||||||||||||||| |||||||||| ||||||||  |||||||    
T  50308844 aaaatggtgggacatatattgatttcacccaataaaaaagtgagt 50308888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 2e-60; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 163 - 313
Target Start/End: Complemental strand, 46517443 - 46517293
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||| |||||||||||| |||||    
T  46517443 ctctctaatactcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacagaatggtgggatatacattgattttatcca 46517344  T
Q  263 ataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  46517343 ataaatgagtgagtgctagagagtgttaaaaagtgagtgttgctagcattc 46517293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 22190097 - 22189935
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||||| |||||||||||||    
T  22190097 aacaccctctctaatactcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccacacaaagtggtgggccatacattgattt 22189998  T
Q  257 catccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||| |||||||||||||  ||||||||||||| |||||||| |||||||||||||    
T  22189997 catccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgtttctagcattcctca 22189935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 148 - 316
Target Start/End: Original strand, 31502479 - 31502647
Alignment:
Q  148 aatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacata 247  Q
    ||||||||||||||||||| | | || |  ||||||||||||||||||||||||| |||||||||||||||| ||||| | |||||||||||||||||||    
T  31502479 aatgctagcaacactctcttttaaacac--tctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacata 31502576  T
Q  248 cattgatttcatccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcctc 316  Q
    | |||||||||||||||||| ||||||||| |||||||  |||||||||||||||||| ||||||||||||    
T  31502577 ccttgatttcatccaataaaagagtgagtgttagagagactgttgaaaagtgagtgttgctagcattcctc 31502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 157 - 318
Target Start/End: Complemental strand, 6442323 - 6442160
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  6442323 aacactatctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccacaaaatggtggaacatacattgattt 6442224  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    ||| |||||||||| |||||| |  ||||||||||||||| ||||||||  || ||||||||||    
T  6442223 catacaataaatgactgagtgatagagagagtgttgaaaaatgagtgttgttaacattcctcaa 6442160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 168 - 319
Target Start/End: Complemental strand, 33008251 - 33008098
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||||||  ||| |||||||||||||||||||||||||||||| ||| |||  |||||| |||||| |||||||||||||| |||||||||||||||||    
T  33008251 taatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacaatgatttcatccaataaa 33008152  T
Q  268 tgagtgagtgctagag--agtgttgaaaagtgagtgttactagcattcctcaac 319  Q
     |||||||||||||||  |||||| ||||||||||||| |||||||||||||||    
T  33008151 agagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattcctcaac 33008098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 163 - 317
Target Start/End: Complemental strand, 11824223 - 11824067
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||    
T  11824223 ctctctaatactcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctacacaaaatggtgggacatacattgatttcatcca 11824124  T
Q  263 ataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||| |||||||||||||  |||| |||||||| |||||||| ||| |||| ||||    
T  11824123 ataaaagagtgagtgctagagagagcgttgaaaaatgagtgttgctaacatttctca 11824067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 148 - 318
Target Start/End: Original strand, 12263449 - 12263621
Alignment:
Q  148 aatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacata 247  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| ||  |||||| || |||||||||    
T  12263449 aatgctaacaacactctctctaatactcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacata 12263548  T
Q  248 cattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||||||| ||||| ||||| |||||  || |  ||||||||||||||||| |||||| ||||| ||||||||    
T  12263549 cattgattccatccgataaaagagtggatgatagagagagtgttgaaaagtaagtgttgctagcgttcctcaa 12263621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 27888438 - 27888279
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||||||||| |    
T  27888438 cactctctctaacactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattgatttta 27888339  T
Q  259 tccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| |  | ||||||| |  |||||||| | ||||||||||||| ||||||||||||    
T  27888338 tccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcattcctc 27888279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 27949431 - 27949270
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||| | ||||||||||| |||||||  |||||||    
T  27949431 aacactctctctaatactcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaaaatggtaggacataacttgattt 27949332  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||| | ||||||||| |  |||||||||| |||||||||||||  |||| ||||||    
T  27949331 catccaatacaagagtgagtgttagagagagtgttaaaaagtgagtgttgttagctttcctc 27949270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 163 - 316
Target Start/End: Complemental strand, 32205228 - 32205076
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| ||||||||| |||||||||||||| |  ||| ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  32205228 ctctctaatactcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggtaggacatacattgatttcatcca 32205129  T
Q  263 ataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||| ||||||||   |||||||||| ||||||||||||| ||||||||||||    
T  32205128 ataaaagagtgagt-agagagagtgttcaaaagtgagtgttgctagcattcctc 32205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 14795289 - 14795131
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||| ||||||| ||||||||| |||||||||||| ||| | |||||||| |||| ||||||  || ||| |||||||||||||||||||||    
T  14795289 aacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgattt 14795190  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||| || |  |||||||||||||||||||||||| |||||||||    
T  14795189 catccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcattc 14795131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 15242281 - 15242123
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||| ||||||| ||||||||| |||||||||||| ||| | |||||||| |||| ||||||  || ||| |||||||||||||||||||||    
T  15242281 aacactctctcttatactcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgattt 15242182  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||| || |  |||||||||||||||||||||||| |||||||||    
T  15242181 catccaataaaaaagtgactgatagagagagtgttgaaaagtgagtgttgctagcattc 15242123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 157 - 294
Target Start/End: Complemental strand, 7775157 - 7775019
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||| ||| || |||||| |||||||||||| ||| || |||||||||||| ||||| | |||||| |||||||||||||||||||||    
T  7775157 aacactctctctaatattcactcacttatttgtttaaatcattctgg-tccacactttgaaaattgaactcacacaaagtggtgggacatacattgattt 7775059  T
Q  257 catccaataaatgagtgagtgc--tagagagtgttgaaaa 294  Q
    ||||||||||| ||||||||||  ||||||||||||||||    
T  7775058 catccaataaaagagtgagtgctatagagagtgttgaaaa 7775019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 157 - 314
Target Start/End: Original strand, 48374461 - 48374618
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||| || ||||||||| |||  ||||||  | ||| ||||||||||| |||  |||     
T  48374461 aacactctctctaatactcactctcttgttggtttaaattattgtgagtatacactttggaaatagaacccatagaaagtggtgggacatgcatgaattc 48374560  T
Q  257 catccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcc 314  Q
    ||| ||||||| |||||||| |||||||||||| ||||||||||||| ||||||||||    
T  48374561 cattcaataaaagagtgagtactagagagtgttcaaaagtgagtgttgctagcattcc 48374618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 168 - 313
Target Start/End: Original strand, 32212903 - 32213049
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||| |||| ||||| |  ||||| | ||| ||||||||||||||||||||||||||    
T  32212903 taatactcactctcttattggtttaaatcattgtggg-ctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaa 32213001  T
Q  268 tgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
     ||  |||||||  |||||||||| |||||||||||||||||||||||    
T  32213002 agatagagtgctagagagagtgttaaaaagtgagtgttactagcattc 32213049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 157 - 312
Target Start/End: Complemental strand, 39254241 - 39254084
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| ||| ||||| |||||||||| ||||||| |||||||||||||| ||| |||| ||||||  |||||| |||||  ||||||||| ||||    
T  39254241 aacactctctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtgaaacatacattaattt 39254142  T
Q  257 catccaataaatgagtgagtgc--tagagagtgttgaaaagtgagtgttactagcatt 312  Q
     || ||||||| ||||||||||  |||||| ||||||||||||| |||| ||||||||    
T  39254141 tattcaataaaagagtgagtgctatagagaatgttgaaaagtgaatgttgctagcatt 39254084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 11692337 - 11692220
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| |||| |||| |||||||||| |||| || ||||||||||||| ||||||  |||||| |||| ||||||||||||||||    
T  11692337 aacacactctctaatactcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacacaaagtggtaggacatacattgattt 11692238  T
Q  257 catccaataaatgagtga 274  Q
    ||||||||||| ||||||    
T  11692237 catccaataaaagagtga 11692220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 157 - 312
Target Start/End: Original strand, 25686857 - 25687019
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||  | ||| ||||  |||||||||||||||    
T  25686857 aacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccataaaaagtggtatgacatacattgattt 25686956  T
Q  257 catcca-------ataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcatt 312  Q
    |||| |       ||||| |||||| |||||||||||||| |||| ||||||||  |||||||    
T  25686957 catcaaataaaatataaaagagtgactgctagagagtgttcaaaaatgagtgttgatagcatt 25687019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 157 - 313
Target Start/End: Original strand, 32178826 - 32178981
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||||||| ||| ||| |||||||||| |||||||||||||| || ||||||||||||| ||||     ||| | |||||| ||||||||| ||||    
T  32178826 aacaatctctctgataatcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaataaa-acagagtggtggaacatacattaattt 32178924  T
Q  257 catccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||| ||||||||||||||||||||||||| | ||||||||||||    
T  32178925 catccaataaaatagtaagtgctagagagtgttgaaaagtgaattttactagcattc 32178981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 157 - 313
Target Start/End: Original strand, 19422856 - 19423014
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| ||||| ||||||| ||| |||||||||||||||||||||| ||||||||| |||||  |   |   ||||   ||||||||||||||||||||    
T  19422856 aacactatctctgatactcactcttttattggtttaaatcattgtggatctacacttcgaaaatagtgacaatacaatggggtgggacatacattgattt 19422955  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||| || ||||||||| |  |||||||||||||||||||||||| ||| |||||    
T  19422956 catccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctaacattc 19423014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 6580024 - 6580191
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| | | |||||||| ||||||  |||||| | ||| |||||||||||| |     
T  6580024 aacactctctctaatactcactctcttattggtttaaattattgtgggtccatattttgaaaattgaacctacacaaagtagtgagacatacattgaatc 6580123  T
Q  257 catc---caataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctcaac 319  Q
    || |    || |||  ||||||||| ||  |||||||||||||||||||||| ||| |||||||||||    
T  6580124 caccaaaaaaaaaaaaagtgagtgcaagaaagagtgttgaaaagtgagtgttgctaccattcctcaac 6580191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 36845567 - 36845701
Alignment:
Q  180 tcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct 279  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||| || ||| ||||||||||| ||||||| ||||||| | |    
T  36845567 tcttattggtttaaatcattgtgggtctatactttgaaaattgaacccacacaaattggtgaga-atatattgatttcattcaataaaagagtgagcgat 36845665  T
Q  280 --agagagtgttgaaaagtgagtgttactagcattc 313  Q
      ||| ||||||||||| ||| |||| ||| |||||    
T  36845666 aaagaaagtgttgaaaaatgaatgttgctaacattc 36845701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 13919889 - 13919775
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgtt 303  Q
    ||||||||||||||  |||||| || ||| ||||||||||||||||||||||| |||||||||||| |||||||||  |||||| | ||||| |||||||    
T  13919889 ctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaatgagcgagtgctagagagagtgctcaaaagagagtgtt 13919790  T
Q  304 actagcattcctcaa 318  Q
     |||||||| |||||    
T  13919789 gctagcatttctcaa 13919775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 229 - 316
Target Start/End: Original strand, 8073382 - 8073471
Alignment:
Q  229 cacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||||||  ||| ||||||||| ||||||||||||| |||||||    
T  8073382 cacaaagtggtgggacatacattgatttcatccgataaaagagtgagtgctaggaagaatgttgaaaaatgagtgttactagtattcctc 8073471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 164 - 267
Target Start/End: Original strand, 44350831 - 44350934
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||||||| ||| || |||||||||||||||||| |||||||||||||||| ||||||   ||||| ||  | ||||||||||||||| ||||||    
T  44350831 tctctaatactcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaacaaagtgacgagacatacattgatttgatccaa 44350930  T
Q  264 taaa 267  Q
    ||||    
T  44350931 taaa 44350934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 9649059 - 9648919
Alignment:
Q  180 tcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattga--tttcatccaataaatgagtgagtg 277  Q
    |||||||||||||||||||||||||| ||||| ||| |||| |||||| |||||| |||||| |||||||||||  ||| ||||||| ||  ||||||||    
T  9649059 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgattttttatccaattaaatagtgagtg 9648960  T
Q  278 ct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||  ||||||| || |||| ||||| |  ||||||||||||    
T  9648959 ctacagagagtatttaaaaatgagtatcgctagcattcctc 9648919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 312
Target Start/End: Original strand, 25092708 - 25092840
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgc--t 279  Q
    |||||||||||||| |||||| ||||| |||| ||||| ||||| | |||||| | || ||||||||||||||| |||| ||| || ||||| ||||       
T  25092708 ttattggtttaaattattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacatacattgattgcatcaaatgaaagagtgggtgcgga 25092807  T
Q  280 agagagtgttgaaaagtgagtgttactagcatt 312  Q
    ||||||||||||||||||||||||  |||||||    
T  25092808 agagagtgttgaaaagtgagtgttgttagcatt 25092840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 31874190 - 31874117
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacacttt 214  Q
    |||||| |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||| |||||||||||    
T  31874190 aaagagtaatgctagtaacactctctcgaatactcactctcttataggtttaaatcattgtgagtctacacttt 31874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 24539145 - 24539273
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||| |||| |||  ||| ||  | ||| |||||||||||| ||||||||    
T  24539145 acactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtggtgggacatatattgattt 24539244  T
Q  257 catccaataaatgagtgagtgctagagag 285  Q
     |||||||||| ||||||||| |||||||    
T  24539245 tatccaataaaagagtgagtgttagagag 24539273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 198 - 303
Target Start/End: Original strand, 44510999 - 44511106
Alignment:
Q  198 ttgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaag 295  Q
    |||||| ||||||| ||||||| ||||| |  ||||| || || ||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||    
T  44510999 ttgtggatctacacattgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtgagtgctagagagagtgttgaaaag 44511098  T
Q  296 tgagtgtt 303  Q
    | ||||||    
T  44511099 taagtgtt 44511106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 19494409 - 19494488
Alignment:
Q  205 tctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagaga 284  Q
    |||||||||||||||  |||||| || ||| ||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  19494409 tctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtactagaga 19494488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 17354598 - 17354710
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  |||||| || ||| |||||||||||||||||||||||||||||||| || |||||| |  |||||||| | ||||  |||||||    
T  17354598 ctacactttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgtt 17354697  T
Q  304 actagcattcctc 316  Q
     ||||||||||||    
T  17354698 gctagcattcctc 17354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 12271095 - 12270984
Alignment:
Q  205 tctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgc--tagagagtgttgaaaagtgagtgt 302  Q
    |||||||||||||||  ||||| | ||||| |||||||||||||||||||||||||  ||||| |||||  |||  ||||||||||||||||||  ||||    
T  12271095 tctacactttgaaaatagaaccac-acaaagtggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgttgaaaagt--gtgt 12270999  T
Q  303 tactagcattcctca 317  Q
    | |||||||||||||    
T  12270998 tgctagcattcctca 12270984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 17749852 - 17749724
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||| |||| |||   || ||  | ||| |||||||||||| ||||||||    
T  17749852 acactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaagtggtgggacatatattgattt 17749753  T
Q  257 catccaataaatgagtgagtgctagagag 285  Q
     |||||||||| ||||||||| |||||||    
T  17749752 tatccaataaaagagtgagtgttagagag 17749724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 27320529 - 27320441
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatac 248  Q
    |||||||||| |||||| | |||||||  ||||||| |||||||||||||||||| |||| ||||||  ||||||||||||||| ||||    
T  27320529 actctctctactactcactttcttattcatttaaataattgtgggtctacactttaaaaattgaacctacacaaaatggtgggatatac 27320441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 10933998 - 10934097
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||| |||  ||| ||  ||||| ||||| |||||| ||| |||| ||||||||||    
T  10933998 taatactcaatctcttattagtttaaatcattgtgggtttatactttggaaatagaaaccatacaaagtggtgagacatatattaattttatccaataaa 10934097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 160 - 303
Target Start/End: Complemental strand, 7459498 - 7459353
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcat 259  Q
    ||||||| ||||||||| ||| |||||||||||||| ||||||| |||| | |||||||| ||| | | || ||| |||||| | |||||||||||| ||    
T  7459498 actctctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcacataaagtggtggaatatacattgattttat 7459399  T
Q  260 ccaataaatgagtgag--tgctagagagtgttgaaaagtgagtgtt 303  Q
    | |||||| || ||||  |  |||||| |||| |||||||||||||    
T  7459398 cgaataaaagaatgagtattatagagaatgttaaaaagtgagtgtt 7459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 12167381 - 12167315
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtct 207  Q
    |||||| |||| || ||||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  12167381 aaagagtaatgttaacaacactctctttaatactcactttcttattggtttaaatcattgtgggtct 12167315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 31874105 - 31874027
Alignment:
Q  241 ggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctcaac 319  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||| |   ||| |||||||||||    
T  31874105 ggacatacattgatttcatccaataaaaaagtgagtgctagagagtgttaaaaaatgagcgcctctaacattcctcaac 31874027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 13919894 - 13919966
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||| ||||||||||||||||||||  |||||||| | ||||| ||||||| ||||||||||||    
T  13919894 tacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 13919966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 22786260 - 22786149
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  |||||| || ||| ||||| ||||||||||||||||| | ||||||  ||||||||||||  |||||| | ||||| |||||||    
T  22786260 ctacactttggaaatggaacccacataaagtggtgagacatacattgatttcacctaataaaaaagtgagtgctagagagagtgctcaaaagagagtgtt 22786161  T
Q  304 actagcattcct 315  Q
     |||||||||||    
T  22786160 gctagcattcct 22786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 312
Target Start/End: Complemental strand, 32605467 - 32605333
Alignment:
Q  179 ctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgc 278  Q
    ||||||||  |||||||||||||| | ||||||||| |||| |||| || |||||| |  || |||||||||||||||||||| ||||| || |||||||    
T  32605467 ctcttattaatttaaatcattgtgagcctacactttaaaaattgaatccacacaaagtaatgagacatacattgatttcatcc-ataaaagaatgagtgc 32605369  T
Q  279 t--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    |  | ||||||||||||||  |||||| ||| ||||    
T  32605368 taaaaagagtgttgaaaagcaagtgttgctaacatt 32605333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 26703527 - 26703590
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||||| || ||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  26703527 gaacccacataaagtggtgagacatacattgatttcacccaataaaagagtgagtgctagagag 26703590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 313
Target Start/End: Original strand, 25428502 - 25428659
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtggg-tctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    |||||||| ||  ||||| ||| ||||||| | |||||| ||| || ||||||||||| |||   ||||| || ||| ||||||||||||||||||||||    
T  25428502 cactctctttagcactcactcttttattggataaaatcaatgtaggatctacactttggaaatgtaacccacataaagtggtgggacatacattgatttc 25428601  T
Q  258 atccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |  ||||||| |||||||| ||  | |||||| | ||||| ||||||| |||||||||    
T  25428602 acacaataaaagagtgagtactaaaaagagtgctcaaaagagagtgttgctagcattc 25428659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 32055708 - 32055607
Alignment:
Q  183 tattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctaga 282  Q
    ||||||||||||||| |||| ||||||| ||||| ||  | ||   || ||| |||||||||||| | |||||||||||||||||||||| |||| ||||    
T  32055708 tattggtttaaatcaatgtgagtctacagtttgacaatagtacttgcataaagtggtgggacataaaatgatttcatccaataaatgagttagtgttaga 32055609  T
Q  283 ga 284  Q
    ||    
T  32055608 ga 32055607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 42466310 - 42466238
Alignment:
Q  230 acaaaatggtgggacataca--ttgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagt 300  Q
    ||||||| ||||||||||||  ||||||||||||||| ||  |||||||| |||||| |||||||||||||||    
T  42466310 acaaaatagtgggacatacacattgatttcatccaatgaaaaagtgagtgatagagaatgttgaaaagtgagt 42466238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 45909612 - 45909504
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    ||||||||||| ||||| ||| ||||||| | |||||| ||| || | |||| |||| |||  |||||| || ||| |||||||||||||||||||||||    
T  45909612 actctctctaacactcactcttttattgggtaaaatcaatgtaggacctacaatttggaaatggaacccacataaagtggtgggacatacattgatttca 45909513  T
Q  259 tccaataaa 267  Q
     ||||||||    
T  45909512 cccaataaa 45909504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 7775002 - 7774944
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttga 216  Q
    |||||||||||||||| | | |||||||||||||||||||||||| |||| |||||||||    
T  7775002 aacactctctctaatatttactctcttattggtttaaatcattgt-ggtccacactttga 7774944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 36845516 - 36845566
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtctaca 210  Q
    |||||||  |||| ||| |||||||||||||||||||||||||||||||||    
T  36845516 actctctagaatattcactctcttattggtttaaatcattgtgggtctaca 36845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 316
Target Start/End: Complemental strand, 2520698 - 2520630
Alignment:
Q  250 ttgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||| |||||||| ||||||||| |  |||||||||||||||| ||||||| |||||| |||||    
T  2520698 ttgatttcacccaataaaagagtgagtgttggagagagtgttgaaaagagagtgttcctagcactcctc 2520630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 14759757 - 14759829
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgcta--gagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| ||||||||||||||| ||||| ||||||  ||||||| | ||||| ||||||| ||||||||||||    
T  14759757 tacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctc 14759829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 10477340 - 10477272
Alignment:
Q  212 tttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcta 280  Q
    |||||||| ||||||  ||||||||||||  ||||||| |||||||||||||||||  ||||| |||||    
T  10477340 tttgaaaattgaacctacacaaaatggtgaaacatacactgatttcatccaataaaatagtgaatgcta 10477272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 31959967 - 31960007
Alignment:
Q  245 atacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  31959967 atacattaatttcatccaataaataagtgagtgctagagag 31960007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 2520715 - 2520773
Alignment:
Q  260 ccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||| ||||||| |||  |||||||||||||| ||||||| ||||||||||||    
T  2520715 ccaataaatgtgtgagtgatagtgagagtgttgaaaagagagtgttgctagcattcctc 2520773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 3855857 - 3855912
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatg 237  Q
    |||||||||||||||||||| |||||  |||||||||| ||||||| || ||||||    
T  3855857 ttattggtttaaatcattgtaggtctgaactttgaaaattgaacccacataaaatg 3855912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 19840948 - 19840878
Alignment:
Q  249 attgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||||| |||||||| |||||||||||||  |||||| | ||||  ||||||| |||||||||||||    
T  19840948 attgatttcacccaataaaagagtgagtgctagagagagtgctcaaaatagagtgttgctagcattcctca 19840878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 38065347 - 38065398
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtct 207  Q
    |||||||||||| |||||||| | ||||||||||||||||||  ||||||||    
T  38065347 caacactctctcaaatactcactttcttattggtttaaatcaaggtgggtct 38065398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 19840956 - 19841030
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcta 280  Q
    |||||||||| |||  |||||| || ||| ||||  ||||||||||||||||| |||||||| |||||| |||||    
T  19840956 ctacactttggaaatggaacccacataaagtggtaagacatacattgatttcaaccaataaaagagtgaatgcta 19841030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 23564049 - 23564156
Alignment:
Q  153 tagcaacactctctctaatactcaat----ctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatac 248  Q
    |||||||||||||||| ||||||| |    || |||||||||||||| |  |||| |||||||||||||||  |||| |  ||||| ||||| |||||||    
T  23564049 tagcaacactctctcttatactcacttactcttttattggtttaaattacagtggatctacactttgaaaatagaactcatacaaagtggtgcgacatac 23564148  T
Q  249 attgattt 256  Q
    ||| ||||    
T  23564149 attaattt 23564156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 38065419 - 38065485
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgt 302  Q
    |||||||| ||||||| |||||||||||||||  ||| |||| || ||||| |||||||| ||||||    
T  38065419 tggtgggagatacattaatttcatccaataaaaaagttagtgttaaagagtattgaaaagagagtgt 38065485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 1316424 - 1316387
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgt 201  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  1316424 tctctaatactcactcttttattggtttaaatcattgt 1316387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 14759722 - 14759677
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctag 281  Q
    |||||||||||| ||||||||||  ||||||| |||||||||||||    
T  14759722 tggtgggacataaattgatttcactcaataaaagagtgagtgctag 14759677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 25428545 - 25428477
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    ||||||||||| |||||||||| |||||||||||  |||||||| | ||||| ||||||| ||| ||||    
T  25428545 tacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatt 25428477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 27320294 - 27320226
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    ||||||||||| || ||||||| ||||||||| |  ||||||||||||||| ||| |||| ||||||||    
T  27320294 tacattgattttattcaataaaagagtgagtgttggagagagtgttgaaaaatgaatgttgctagcatt 27320226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 30742562 - 30742615
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctaca 210  Q
    ||||||| |||||||| ||| | |||||||| ||||||||||||| ||||||||    
T  30742562 aacactcactctaatattcattttcttattgatttaaatcattgtaggtctaca 30742615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 31628157 - 31628100
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacacttt 214  Q
    |||||| ||| ||||||| | ||||||||||||||||||||| || |||| |||||||    
T  31628157 aacactatctttaatacttactctcttattggtttaaatcatcgtaggtcaacacttt 31628100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 37549693 - 37549621
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||| |||| |||||||| |||| ||||||||||  |||| | ||||| ||||||| ||||||||||||    
T  37549693 tacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcattcctc 37549621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 41508385 - 41508429
Alignment:
Q  245 atacattgatttcatccaataaatgagtgagtgctagagagtgtt 289  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||    
T  41508385 atacattgatttcatccaataaaaaagtgagtgctaaaaagtgtt 41508429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 42863581 - 42863617
Alignment:
Q  280 agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  42863581 agagagtgtttaaaagtgagtgttgctagcattcctc 42863617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 2e-60; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 20493467 - 20493628
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| ||||||||||||||||    
T  20493467 aacactctctctattactcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtaggacatacattgattt 20493566  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||| ||||||||||||    
T  20493567 catccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcattcctc 20493628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 157 - 318
Target Start/End: Complemental strand, 46450224 - 46450062
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaa-tggtgggacatacattgatt 255  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||| ||||||||||||||||||||    
T  46450224 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaagtggtgggacatacattgatt 46450125  T
Q  256 tcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
     |||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  46450124 ccatctaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattcctcaa 46450062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 28529409 - 28529249
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||  |||||| | |||||||||||||||||||||    
T  28529409 aacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaa--cccacacagtggtgggacatacattgattt 28529312  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  28529311 catccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcctca 28529249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 41451917 - 41452079
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||||| |||||||    
T  41451917 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaacccacacaaagtggtgggacatactttgattt 41452016  T
Q  257 catccaataaatgagtgagtgctagaga--gtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||| |||||||| |||||||  ||||||||||||||||||| |||| ||||||||    
T  41452017 catccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctca 41452079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 52123978 - 52124139
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  52123978 aacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccacaaaatagtgggacatacattaattt 52124077  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||| |||| ||||||||||  |||||| ||| ||||||||||||| ||||||||||||    
T  52124078 catccaacaaataagtgagtgctagagagagcgttaaaaagtgagtgttgctagcattcctc 52124139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 24734863 - 24734702
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||| ||||||||||||| |||||||    
T  24734863 aacactctctctaatactcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaacccacacaaagtggtgggacatactttgattt 24734764  T
Q  257 catccaataaatgagtgagtgctagaga--gtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||| |||||||| |||||||  ||||||||||||||||||| |||| |||||||    
T  24734763 catccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctc 24734702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 37776725 - 37776887
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  37776725 aacaccctctctaatactcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgattt 37776824  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||| |||||| |||||||||||  ||| |||||||||||||||||||| |||||||||||||    
T  37776825 catctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttgctagcattcctca 37776887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 18427172 - 18427292
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  18427172 aacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatggtgggacatacattgattt 18427271  T
Q  257 catccaataaatgagtgagtg 277  Q
    |||||||||||||||||||||    
T  18427272 catccaataaatgagtgagtg 18427292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 153 - 312
Target Start/End: Complemental strand, 41387723 - 41387564
Alignment:
Q  153 tagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattg 252  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||||||||| ||||||||||| | ||||| |||||||| ||| || |||||| |    
T  41387723 tagcaacactctctccaatactcaatctcttatttgattaaatcattgtgggtctgcactttgaaaattaaacccacacaaaatagtgtgatatacatcg 41387624  T
Q  253 atttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcatt 312  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  41387623 atttaatccaataaatgagtgagtgctagagagtgttgaataatgagtgttgctagcatt 41387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 46161104 - 46160946
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||  |||||  |||||| |||| ||||||  |||||||||    
T  46161104 acactctctctaatactcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttc 46161005  T
Q  258 atccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  46161004 atccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattcctc 46160946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 144 - 317
Target Start/End: Original strand, 55452024 - 55452197
Alignment:
Q  144 gaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtggga 243  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| || |||||||||||| |||  |||||| |||||| ||||||||    
T  55452024 gaggaatgctagcaacactctctctaatactcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtggga 55452123  T
Q  244 catacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||  ||| ||||||||||| |||||||| | |||||||||| ||||||||||||| ||| |||||||||    
T  55452124 catacatgtattccatccaataaaagagtgagtaccagagagtgttcaaaagtgagtgttgctaacattcctca 55452197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 333 - 616
Target Start/End: Original strand, 7129587 - 7129874
Alignment:
Q  333 ataaacgtcacatttaacaaaaagatggtcaatgtcctcattctcaccatagtttgcc--------ttgctcagtagctgtaataatgctcatatgcgat 424  Q
    |||||||||| |||||| ||||| || || ||||| ||||||||||||| |||| |||        |||||| ||||||| |||||||||| || || ||    
T  7129587 ataaacgtcatatttaaaaaaaaaatagtgaatgttctcattctcaccacagttcgccgtgcaaccttgctcggtagctgcaataatgctcctacgcaat 7129686  T
Q  425 aaattatcctttgtcggcactctattccgcaaaagcctccaagcaaaaataaacatctatagaggaataacctttagagagacaaattggtgagaatttt 524  Q
    |||| ||||||| ||||||||    |||||| ||||||||||  ||||||| |||||| |||||||| |||||| ||  ||  ||| ||||||| |||||    
T  7129687 aaataatcctttttcggcact----tccgcagaagcctccaaataaaaatagacatctttagaggaagaaccttgagccagcaaaagtggtgaggatttt 7129782  T
Q  525 ggtgctgattgatgtcaacttctgtcaattttttgtaagcactacttacagtataacaattagatgaatgcaaatgccaaatccaatgatca 616  Q
    |||||||||||||||||| || |||||| || ||||| |||||||| ||| ||||| ||| | ||||||||| |||||||||||||||||||    
T  7129783 ggtgctgattgatgtcaatttttgtcaacttgttgtaggcactactaacaatataaaaatgacatgaatgcagatgccaaatccaatgatca 7129874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 5452084 - 5452243
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||| |||||||  |||||||||| |||||||| |||  ||||||||||| ||||| |||| || |||||| |||||||| ||||||||||||    
T  5452084 aacactctctccaatactcgctctcttattgatttaaatccttg--ggtctacacttagaaaattgaatccacacaaagtggtgggaaatacattgattt 5452181  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||| |||||| || |  |||||||||||||||||||||||| ||||||||||||    
T  5452182 catccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttgctagcattcctc 5452243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 157 - 303
Target Start/End: Original strand, 50156682 - 50156828
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| | |||| ||||||||| ||||    
T  50156682 aacactctttgtaatactcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacccccgcaaagttgtggaacatacattaattt 50156781  T
Q  257 catccaataaatgagtgagtgctagagagtgttgaaaagtgagtgtt 303  Q
    ||| |||||||| ||| |||   |||| |||||||||||||||||||    
T  50156782 cattcaataaataagtaagtatcagagtgtgttgaaaagtgagtgtt 50156828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 157 - 303
Target Start/End: Original strand, 8825001 - 8825149
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||| || || |||||||||| ||||||| || |||||||||||||||| ||||||||    
T  8825001 aacactctctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatggtgggacatatattgattt 8825100  T
Q  257 catccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgtt 303  Q
    |||| |||||| | |||||| ||||||||   |||||||||||||||||    
T  8825101 catctaataaaagggtgagtactagagagatggttgaaaagtgagtgtt 8825149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 184 - 298
Target Start/End: Original strand, 26310495 - 26310611
Alignment:
Q  184 attggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--ag 281  Q
    |||||||||||||||| ||||||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||| |||| ||||||  ||    
T  26310495 attggtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagag 26310594  T
Q  282 agagtgttgaaaagtga 298  Q
    |||||||||||||||||    
T  26310595 agagtgttgaaaagtga 26310611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 165 - 306
Target Start/End: Complemental strand, 22604710 - 22604567
Alignment:
Q  165 ctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaat 264  Q
    ||||||| |||| ||||||||  ||||||||||||||| ||||||| |||||||| ||||| ||||||||||||||||||||||||| |||| |||||||    
T  22604710 ctctaattctcactctcttataagtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaat 22604611  T
Q  265 aaatgagtgagtgct--agagagtgttgaaaagtgagtgttact 306  Q
    ||||||||||||| |  ||||||| || |||||| |||||||||    
T  22604610 aaatgagtgagtgttaaagagagtattaaaaagtaagtgttact 22604567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 20791454 - 20791296
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||| |||  |||| | || ||| |||||||||||||||||||||    
T  20791454 aacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgattt 20791355  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||||||||  |||||||||  ||||||||  ||| |||||||||    
T  20791354 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaacgttgctagcattc 20791296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 19345032 - 19345133
Alignment:
Q  167 ctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataa 266  Q
    |||||||| | ||| ||||||||||||||||||||| ||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  19345032 ctaatacttattcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataa 19345131  T
Q  267 at 268  Q
    ||    
T  19345132 at 19345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 162 - 315
Target Start/End: Original strand, 15790397 - 15790551
Alignment:
Q  162 tctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcc 261  Q
    ||||||||||||||| |||||||||||||||||||||| |||  |||||||||||||| ||  || ||| ||||||||| ||||||||||||||| ||||    
T  15790397 tctctctaatactcactctcttattggtttaaatcattatggc-ctacactttgaaaattgtcccaccataaaatggtgagacatacattgattttatcc 15790495  T
Q  262 aataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcct 315  Q
    ||||||| ||| |||| |||  | ||||||||||||||||| ||  ||||||||||    
T  15790496 aataaataagtaagtgttagaaaaagtgttgaaaagtgagttttgttagcattcct 15790551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 27243204 - 27243041
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    |||||||| ||||||||||| ||||| ||||| |||||||| |||||||| ||||||||| |||  |||||| || ||| ||||||||||| ||||||||    
T  27243204 aacactctttctaatactcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtggtgggacatgcattgatt 27243105  T
Q  256 tcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    | |||||||||| ||||||||| |  |||||||||| ||||| ||||||| ||||||| |||||    
T  27243104 ttatccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcatccctca 27243041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 163 - 304
Target Start/End: Original strand, 10948588 - 10948731
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||| ||||||||| ||| |||||||||||||||||||||||| |||||||| |||| |||||   |||||| |||||| ||||||||| || || ||||    
T  10948588 ctctttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacattaatatcgtcca 10948687  T
Q  263 ataaatgagtgagtgct--agagagtgttgaaaagtgagtgtta 304  Q
    |||||  ||||||||||  ||| |||||||||||||||||||||    
T  10948688 ataaagaagtgagtgcttgagaaagtgttgaaaagtgagtgtta 10948731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 389 - 616
Target Start/End: Original strand, 36280544 - 36280771
Alignment:
Q  389 ccttgctcagtagctgtaataatgctcatatgcgataaattatcctttgtcggcactctattccgcaaaagcctccaagcaaaaataaacatctata-ga 487  Q
    ||||||||| ||||||  ||||||||| |||||  |||||||||||| ||  | ||| |||| |||||||||||||||| ||||||| | | || || ||    
T  36280544 ccttgctcactagctgccataatgctcctatgcactaaattatccttagtttggactttattacgcaaaagcctccaagtaaaaatagaga-ctttacga 36280642  T
Q  488 ggaataacctttagagagacaaattggtgagaattttggtgctgattgatgtcaacttctgtcaattttttgtaagcactacttacagtataacaattag 587  Q
    |||| | ||||  |   ||||||||| |||| ||||||||  |||||||||||||||||| ||||||| ||||| |||||||| |||| ||| |||| ||    
T  36280643 ggaacatccttgtgcctgacaaattgatgaggattttggtagtgattgatgtcaacttctatcaatttattgtaggcactactaacagaatagcaatgag 36280742  T
Q  588 atgaatgcaaatgccaaatccaatgatca 616  Q
    ||||||| || |||||||| |||||||||    
T  36280743 atgaatgtaactgccaaattcaatgatca 36280771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 157 - 318
Target Start/End: Complemental strand, 29755658 - 29755495
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||| |||||||||  |  ||||||||||||||||||||||| | ||||||||||||||| ||||||| |||||| | |||  ||||| |||||||     
T  29755658 aacactccctctaatacctaccctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaaacatatattgattc 29755559  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
     || | ||||| ||||| ||| |  ||||| |||||||||||||||||| ||||||||||||||    
T  29755558 tattcgataaaagagtgggtgttaaagagaatgttgaaaagtgagtgttgctagcattcctcaa 29755495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 157 - 300
Target Start/End: Complemental strand, 138921 - 138778
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||| ||||||| | ||| |||||| |||||||||||||  || |||| ||| |||| ||||  |  ||||||||||| |||||||||||||||    
T  138921 aacaccctctttaatacttactcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacatacattgattt 138822  T
Q  257 catccaataaatgagtgagtgctagagagtgttgaaaagtgagt 300  Q
    ||| ||||||| |||||||||||||||||| ||||||| |||||    
T  138821 cattcaataaaagagtgagtgctagagagtcttgaaaactgagt 138778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 164 - 316
Target Start/End: Complemental strand, 48351587 - 48351433
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||||||  |||||||||| ||||||||||| ||| | ||||||||||||| ||||||| |||||| | ||| |||||| |||||||| ||||||    
T  48351587 tctctaatactctttctcttattgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacatatattgattttatccaa 48351488  T
Q  264 taaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| ||||| ||  |  |||||||||| |||| ||||||||  |||||||||||    
T  48351487 taaaagagtgtgtcttaaagagagtgttaaaaactgagtgttgttagcattcctc 48351433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 29588755 - 29588865
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| | || ||| ||   ||||||||||||||||    
T  29588755 aacactctctataacactcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaactcacataaagtgaaaggacatacattgattt 29588854  T
Q  257 catccaataaa 267  Q
     ||||||||||    
T  29588855 tatccaataaa 29588865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 24429032 - 24429125
Alignment:
Q  142 aagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaa 235  Q
    ||||| ||||||||||| ||||||||||||||||| | | |||||||||||||||||||||| |||||||||| |||| ||||||| |||||||    
T  24429032 aagagtaatgctagcaatactctctctaatactcactattttattggtttaaatcattgtggatctacactttaaaaattgaaccctcacaaaa 24429125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 14236177 - 14236049
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| ||||||||||| | | |||||||| ||||| ||||||| ||||||||||| |||  |||| | || ||| |||||||||||| ||||||||    
T  14236177 aacactctttctaatactcacttttttattggtctaaattattgtggatctacactttggaaatagaactcgcataaagtggtgggacatatattgattt 14236078  T
Q  257 catccaataaatgagtgagtgctagagag 285  Q
    |||||||||||  ||||||||||| ||||    
T  14236077 catccaataaaatagtgagtgctaaagag 14236049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 156 - 316
Target Start/End: Complemental strand, 46576108 - 46575945
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgat 254  Q
    ||||||||||| ||||||||| ||||| || || |||||||| |||||| | |||| ||||||||  |||||| || ||| ||||||||||||||||| |    
T  46576108 caacactctctttaatactcactctctaatagggttaaatcaatgtggggcgtacattttgaaaatggaacccacaaaaagtggtgggacatacattggt 46576009  T
Q  255 ttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| |||||||  ||||||||| |  ||||||||||||| || |||||||  |||||||||||    
T  46576008 ttcagccaataagagagtgagtgtttgagagagtgttgaagagagagtgttgatagcattcctc 46575945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 13809239 - 13809083
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| ||||||| | ||| ||||||||||| ||||| || |||||||| || |||||| |||  |||||| || |||||||||||||||||||||||||    
T  13809239 acactttctctaacattcattctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacccacataaaatggtgggacatacattgattt 13809140  T
Q  257 catccaataaatgagtg-agtgctagagagtgttgaaaagtgagtgttactagcatt 312  Q
     |||||||||| ||||| |||   |||||||||  ||||| ||||||| ||||||||    
T  13809139 tatccaataaaagagtgaagttagagagagtgtgtaaaagagagtgttgctagcatt 13809083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 38414800 - 38414708
Alignment:
Q  162 tctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgat 254  Q
    ||||| ||| ||||| |||||||||||||||||| || |||| |||||||||| |||| | ||||| ||||||||||||||||||||||||||    
T  38414800 tctctttaacactcactctcttattggtttaaattatcgtggatctacactttaaaaattaaacccacacaaaatggtgggacatacattgat 38414708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 312
Target Start/End: Original strand, 40715895 - 40716041
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||| |||||||| |||| ||||||||||||||  ||| ||| ||| |||| ||||||| |||||| || || | |||||||| |||||| |  |||||    
T  40715895 taatattcaatctcctattagtttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtcatacattaatttcaccatataaa 40715994  T
Q  268 tgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
     |||||||||||  |||||||||||||||||||||||| ||| ||||    
T  40715995 agagtgagtgctagagagagtgttgaaaagtgagtgttgctaacatt 40716041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 54140964 - 54141043
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||||||||||  |||||| |  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54140964 ctacactttgaaaatggaacccacgtaaagtggtgggacatacattgatttcacccaataaatgagtgagtgctagagag 54141043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 2419486 - 2419597
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| ||| ||||||||| | |||||||||||||||||||||||||||||||| ||| |||  |||| |   |||| |||| |||||| ||||||||     
T  2419486 aacactttctttaatactcactttcttattggtttaaatcattgtgggtctacacattggaaatagaactcatgcaaagtggtaggacatgcattgattc 2419585  T
Q  257 catccaataaat 268  Q
    ||||||||||||    
T  2419586 catccaataaat 2419597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 752539 - 752461
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacat 246  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||  |||  |||||| |||||| |||||||||||    
T  752539 taatactcattctcttattagtttaaatcattgtgggtctacactttagaaatagaacccacacaaagtggtgggacat 752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 30624739 - 30624633
Alignment:
Q  207 tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttact 306  Q
    |||| |||||||| ||||| | |||||| |||||  ||||||||| |||| || ||||||| ||||||||| ||||||||| | ||||||||||||| ||    
T  30624739 tacattttgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtgagtgttagagagtgctcaaaagtgagtgttgct 30624640  T
Q  307 agcattc 313  Q
    |||||||    
T  30624639 agcattc 30624633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 164 - 302
Target Start/End: Original strand, 40702151 - 40702289
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||| ||||  | ||| |||||||||| | ||||| || | ||||| |||| ||||||| || ||| || |||  |||||||| ||||||||  |    
T  40702151 tctctaatattcaaatttttaatggtttaaattactgtggatcaaaactttaaaaattgaacccacataaagtgatggatcatacattaatttcatcata 40702250  T
Q  264 taaatgagtgagtgctagagagtgttgaaaagtgagtgt 302  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  40702251 taaaagagtaagtgctagagagtgttgaaaagtgagtgt 40702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 44844139 - 44844029
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||||| ||||| | | ||||||| ||||||||||||||||| |||||||| |||| ||||| | ||  ||||||||||||||||||| ||||    
T  44844139 acactctctctaacactcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactcacatgaaatggtgggacatacatttattt 44844040  T
Q  257 catccaataaa 267  Q
     || |||||||    
T  44844039 tattcaataaa 44844029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 163 - 318
Target Start/End: Original strand, 45515525 - 45515680
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||| ||| ||||||||||||| |||||||  | ||||||||||||||||| ||||| | |||    || ||||| ||||||||||||||||||    
T  45515525 ctctctaatattcactctcttattggtt-aaatcata-taggtctacactttgaaaattgaactcacactctgtgatgggatatacattgatttcatcca 45515622  T
Q  263 ataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||||  |||||||| |  |||||||||| ||||||||| |||  || ||||||||||    
T  45515623 ataaaatagtgagtgttggagagagtgttaaaaagtgagcgttgttaacattcctcaa 45515680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 157 - 307
Target Start/End: Original strand, 41707462 - 41707613
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| ||| ||| | | |||||| ||||||||| |||||||||||| ||||| |||| ||||||| |||||| || ||  ||||||||||||||    
T  41707462 aacactctctttaacacttattttcttat-ggtttaaattattgtgggtctatactttaaaaattgaacccacacaaagtgatgaaacatacattgattt 41707560  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttacta 307  Q
     ||||||| |  ||||||||| |  |||||||| | |||||||| ||||||||    
T  41707561 tatccaatgagagagtgagtgttagagagagtgctcaaaagtgaatgttacta 41707613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 54140959 - 54140887
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||||||||||||||||||||||||||  |||| | ||||| ||||||| ||||||||||||    
T  54140959 tacattgatttcatccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcattcctc 54140887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 46237133 - 46237196
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||||| || ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  46237133 gaacccacataaagtggtgggacatacattgatttcatccaataaaagagtgattgctagagag 46237196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 742103 - 742025
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacat 246  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||  |||  ||| || |||||| |||||||||||    
T  742103 taatactcattctcttattagtttaaatcattgtgggtctacactttagaaatagaatccacacaaagtggtgggacat 742025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 29388616 - 29388686
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaaccc 227  Q
    |||||||||||||| || || ||||||||||  ||||||||||||| |||||||||||||||| |||||||    
T  29388616 aacactctctctaacacccactctcttattgacttaaatcattgtgagtctacactttgaaaattgaaccc 29388686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 317
Target Start/End: Complemental strand, 2009146 - 2008991
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||| ||| | | |||||| ||||||| |||||| ||||||||||| ||||||||| |  || ||| |||| ||||||||||| ||||||||      
T  2009146 ctctctaatattcatttttttattgatttaaattattgtgagtctacactttaaaaactgaaactacataaagtggt-ggacatacattaatttcatctg 2009048  T
Q  263 ataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||| |||||||   |  |||||| ||| ||||||||| ||| |||||||||||||    
T  2009047 ataaaagagtgagcaataaagagagggttaaaaagtgagcgttgctagcattcctca 2008991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 37285435 - 37285302
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||| | | | |||||||||||||| ||||||||||| |||||| ||||   |||||  | ||||||||| |||||||||  |||||||| |    
T  37285435 ctctctaatacttacttttttattggtttaaattattgtgggtctgcactttaaaaataaaacccataaaaaatggtgcgacatacatgaatttcatcta 37285336  T
Q  263 ataaatgagtgagtgctagagagtgttgaaaagt 296  Q
    | |||  ||||||||||| | |||||| ||||||    
T  37285335 acaaaaaagtgagtgctaaatagtgttaaaaagt 37285302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 316
Target Start/End: Original strand, 37600217 - 37600313
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| || ||| ||||||||||||||||||||||| |||||||| ||||| |||||  |||||||| | ||||| |||||||  |||||||||||    
T  37600217 gaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 37600313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 18722535 - 18722579
Alignment:
Q  230 acaaaatggtgggacatacattgatttcatccaataaatgagtga 274  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  18722535 acaaaatggtgggacatacattgatttcatccaataaataagtga 18722579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 24748933 - 24749060
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    |||||||||||| ||||| ||| ||||||| | |||||| ||| || | ||||||||  |||  |||||| || ||||||||||||||||||||||| ||    
T  24748933 cactctctctaacactcactcttttattggatgaaatcaatgtaggacctacactttagaaatggaacccacataaaatggtgggacatacattgatatc 24749032  T
Q  258 atccaataaatgagtgagtgctagagag 285  Q
    | || ||||| || |||||| |||||||    
T  24749033 accccataaaagaatgagtgttagagag 24749060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 303
Target Start/End: Original strand, 50661527 - 50661692
Alignment:
Q  143 agaggaatgctagcaacactctctct--aatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggt 239  Q
    |||||| ||||| ||||||||||| |  || ||||  ||| ||||||| |||||||| |||||||| |||| |||| |||  |||||| || ||| ||||    
T  50661527 agaggactgctatcaacactctcttttgaacactctttcttttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggt 50661626  T
Q  240 gggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||||| ||||||||| ||| |||||| |||| |||| |  |||||||||| ||||| |||||||    
T  50661627 gggacatgcattgattttatctaataaaagagtaagtgttagagagagtgtttaaaagagagtgtt 50661692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 43657067 - 43657145
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagaga 284  Q
    |||||||||| |||  |||| | || ||| ||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  43657067 ctacactttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtgagtgctagaga 43657145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 41607544 - 41607459
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    |||||| ||||||| | ||||| ||||||||||||||| | ||| | |||||||| ||| |||||| ||||||| |||||||||||    
T  41607544 ttattgatttaaataactgtggatctacactttgaaaattaaactcacacaaaatagtgagacatatattgattacatccaataaa 41607459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 49072138 - 49072057
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    |||||||||||||| |||||||||||||||||||||||   ||| |  ||||| ||||| |||||| ||| |||||||||||    
T  49072138 ttattggtttaaattattgtgggtctacactttgaaaatataactcatacaaagtggtgagacataaattaatttcatccaa 49072057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 318
Target Start/End: Original strand, 49720099 - 49720187
Alignment:
Q  232 aaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||||||||||| ||||||| |||| |||||||||   |||||||| |  |||||||||||||||||||||||   |||||||||||||    
T  49720099 aaaatggtgggatatacattcatttaatccaataagcaagtgagtgtttgagagagtgttgaaaagtgagtgtccttagcattcctcaa 49720187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 357894 - 357786
Alignment:
Q  182 ttattggtttaaatcattgtgggt-ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcta 280  Q
    ||||||| | |||||| ||| ||| |||||||||| |||  |||||| || ||| ||||| | ||||||||||||||   ||||||| ||||||||||||    
T  357894 ttattggatgaaatcaatgtaggtactacactttggaaatggaacccacataaagtggtgaggcatacattgatttccctcaataaaagagtgagtgcta 357795  T
Q  281 gagagtgtt 289  Q
    |||||||||    
T  357794 gagagtgtt 357786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 38138615 - 38138695
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatac 248  Q
    ||||||| | |||||||||||||||||||||||||| |||| |||||||| |  ||| |  ||||||||||||||| ||||    
T  38138615 taatacttactctcttattggtttaaatcattgtggatctatactttgaagatagaaactacacaaaatggtgggatatac 38138695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 357874 - 357928
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagt 300  Q
    ||||||||||||||||||||||  |||||||| ||||||||||| ||||| ||||    
T  357874 tacattgatttcatccaataaaaaagtgagtgatagagagtgttcaaaagagagt 357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 313
Target Start/End: Original strand, 29389108 - 29389193
Alignment:
Q  230 acaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||||| ||||||||||||||||||||| || |||| || ||||||||| |  || ||||| | ||||||||||||| |||||||||    
T  29389108 acaaagtggtgggacatacattgattttattcaatgaaagagtgagtgttaaagtgagtgctcaaaagtgagtgttgctagcattc 29389193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 10769791 - 10769719
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||| |||||| |||| ||||||||  |||||| | ||||| |||||||| |||||||||||    
T  10769791 tacattgatttcatcaaataaaagagtaagtgctagagagagtgctcaaaagagagtgttattagcattcctc 10769719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 10769826 - 10769910
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    ||||||||||||||||||||||| | |||||| ||||  ||| |  |||||||| | ||||| ||||||| ||||||||||||||    
T  10769826 tggtgggacatacattgatttcaccaaataaaagagtcggtgatagagagagtgctcaaaagagagtgttgctagcattcctcaa 10769910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 24748976 - 24748937
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  24748976 tacattgatttcatccaataaaagagtgagtgttagagag 24748937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 280
Target Start/End: Original strand, 7419241 - 7419323
Alignment:
Q  198 ttgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcta 280  Q
    |||||| ||||||||||| |||  |||| | |||||||| | |||||||| ||| |||| ||| |||||| ||||||||||||    
T  7419241 ttgtggatctacactttggaaatagaactcacacaaaatagagggacatatatttattttatctaataaaagagtgagtgcta 7419323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 21232609 - 21232706
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||| || ||| |||||| |||||||||||||||| ||||||||  | ||||||||  ||| |||| | ||||| | ||||| |||||||||||||    
T  21232609 gaacccacataaagtggtggaacatacattgatttcacccaataaaaaaatgagtgctaaagaaagtgctcaaaagagggtgttgctagcattcctca 21232706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 317
Target Start/End: Complemental strand, 37600196 - 37600123
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||| |||| |||||||| ||||| |||||||  |||||| | ||||| ||||||| |||||||||||||    
T  37600196 tacattgaattcaaccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcattcctca 37600123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 38928075 - 38928006
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgttactagcattc 313  Q
    ||||||||||||| |||||||| ||||||||| |||||  |||| | ||||| ||||||| |||||||||    
T  38928075 tacattgatttcacccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcattc 38928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 39185306 - 39185237
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgcta--gagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||| || ||||||  |||||||||||  ||||||||  ||||||||||||||||| |||||    
T  39185306 tacattgatttcttcaaataaaatagtgagtgctaaagagagtgtgcaaaagtgagtgttactaacattc 39185237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 18722583 - 18722639
Alignment:
Q  262 aataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||| ||||||||||||||||  ||| ||||||||||||||  |||||||||||    
T  18722583 aataaataagtgagtgctagagagagtgtagaaaagtgagtgttgttagcattcctc 18722639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 52951475 - 52951543
Alignment:
Q  250 ttgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||| |  |||||||||||  |||||||||| ||||| ||||||| |||||| |||||    
T  52951475 ttgatttcatccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagcactcctc 52951543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 22856282 - 22856318
Alignment:
Q  183 tattggtttaaatcattgtgggtctacactttgaaaa 219  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  22856282 tattggtttaaataattgtggatctacactttgaaaa 22856318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 4e-58; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 50164553 - 50164392
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  50164553 aacactctctctaatgctcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaaatggtgggagatacattgattt 50164454  T
Q  257 catccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
     ||||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||    
T  50164453 tatccaataaatgagtgagtgctagagagagtgttaaaaagtgagtgttactagtattcctc 50164392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 8109114 - 8108952
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||   |||||| | |||||||||||||||||||    
T  8109114 aacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaacacaaattagtgggacatacattgattt 8109015  T
Q  257 catccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    || |||||||| |||||||||||||  |||||||||||||||||||||| |||||||| ||||    
T  8109014 cacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatttctca 8108952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 141 - 316
Target Start/End: Original strand, 33653495 - 33653672
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtg 240  Q
    |||||| ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| || | | |||||||| |||| |||||||||||||||    
T  33653495 aaagagtaatgctaccaacactctctctaatactcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtg 33653594  T
Q  241 ggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||||||||||||| ||||||||||||| |  |  ||||||||||||||| |||||||| ||||||||||||    
T  33653595 ggacatacattgatttcatcaaataaatgagtgattaatagagagagtgttgaaaactgagtgttgctagcattcctc 33653672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 157 - 318
Target Start/End: Complemental strand, 43771284 - 43771121
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||||    
T  43771284 aacaccctctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacacagagtggtgggacatacattgattt 43771185  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    ||||||||||| ||||||||  |  |||||||||| ||||||||||||| ||| ||||| ||||    
T  43771184 catccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgttgctaccattcttcaa 43771121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 39471315 - 39471153
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||  |||||| |||||||||||||||||||||    
T  39471315 aacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaacacaaagtggtgggacatacattgattt 39471216  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||| |||||| ||||  ||| |  ||||||| || ||||||||||||| |||||||||||||    
T  39471215 catctaataaaagagttggtgttaaagagagtatttaaaagtgagtgttgctagcattcctca 39471153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 722315 - 722187
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||   |||||| ||||||||||||| |||||||    
T  722315 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgattt 722216  T
Q  257 catccaataaatgagtgagtgctagagag 285  Q
    |||||||||||  ||||||||||||||||    
T  722215 catccaataaaaaagtgagtgctagagag 722187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 178 - 316
Target Start/End: Original strand, 20225384 - 20225522
Alignment:
Q  178 tctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    ||||||||||||||||||||||||| |||||||||||| |||  |||||| || ||| ||||||||||| ||| |||| ||||||||||| |||||||||    
T  20225384 tctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaagagtgagtg 20225483  T
Q  278 ctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  20225484 ctagagagtgttcaaaagtgagtgttgctagcattcctc 20225522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 161 - 312
Target Start/End: Complemental strand, 24834732 - 24834579
Alignment:
Q  161 ctctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatc 260  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  24834732 ctctctctaatagtcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaaaatggtgggacatacattgattccatc 24834633  T
Q  261 caataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    |||||||   ||||| | |  |||||||||  ||||||||||||| ||||||||    
T  24834632 caataaaaatgtgagcgttagagagagtgtcaaaaagtgagtgttgctagcatt 24834579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 157 - 302
Target Start/End: Original strand, 754602 - 754749
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||   |||||| ||||||||||||| |||| ||    
T  754602 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgagtt 754701  T
Q  257 catccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgt 302  Q
    |||||||||||  |||||||| |||||  ||||||||||||| |||||    
T  754702 catccaataaaaaagtgagtgttagagaaagtgttgaaaagtaagtgt 754749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 26361330 - 26361483
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| || ||||||||||||||||||| ||||||||||||||||| | ||||||| |||||||||||||| |||||||||| ||    
T  26361330 aacaccctctctaatactcactcacttattggtttaaatcattatgggtctacactttgaatattgaacccacacaaaatggtgggtcatacattgactt 26361429  T
Q  257 catccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||| |||||        |||||||||||||||||||||| ||||||||||||    
T  26361430 catccaataaaagagtg------ttagagtgttgaaaagtgagtgttgctagcattcctc 26361483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 171 - 319
Target Start/End: Complemental strand, 49077393 - 49077243
Alignment:
Q  171 tactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatga 270  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||||||||| ||| |||| ||| |||||| ||    
T  49077393 tactcaaactcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatatattaattttatctaataaaaga 49077294  T
Q  271 gtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaac 319  Q
     ||||||||  ||||| ||||||||| |||||||| |||||||||||||||    
T  49077293 atgagtgctaaagagaatgttgaaaactgagtgttgctagcattcctcaac 49077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 24938436 - 24938557
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||||||| |||| |||| ||  ||||||||||||||||||||||||||    
T  24938436 caacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactttaaaaattgaatccaaacaaaatggtgggacatacattgatt 24938535  T
Q  256 tcatccaataaatgagtgagtg 277  Q
     ||||||||||| |||||||||    
T  24938536 acatccaataaaagagtgagtg 24938557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 164 - 316
Target Start/End: Original strand, 34129429 - 34129583
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||||||| ||| ||||||||||||| ||||||| ||| |||||||||||| ||||| | |||||| |||||||| |||||||||| ||||||||    
T  34129429 tctctaatactcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaa 34129528  T
Q  264 taaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    || | |||||||||||  ||||||| ||||||||||| |||| ||| ||||||||    
T  34129529 tagaagagtgagtgctagagagagttttgaaaagtgaatgttgctaccattcctc 34129583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 308
Target Start/End: Complemental strand, 20454696 - 20454545
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||| ||||| ||| |||||| ||||||||||||||| ||||||||||||||| ||||||  |||||| ||   ||||||||||||||||    
T  20454696 aacactctctctaacactcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtg--tggacatacattgattt 20454599  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactag 308  Q
     ||| |||||| |||||||||||  ||||||||||||||||| |||||| ||||    
T  20454598 tatctaataaaagagtgagtgctagagagagtgttgaaaagtaagtgttgctag 20454545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 49242328 - 49242166
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| | ||||||| |||||||||||||||||||||||||  ||||||| ||||||| ||||||| |||||| || ||||||||| ||||||||    
T  49242328 aacactctctatgatactcattctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccacacaaagtgatgggacatatattgattt 49242229  T
Q  257 catccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||| ||  ||||| || |||  |||||||| ||||||||||||| ||| || ||||||    
T  49242228 catccaattaaaaagtgactgttagatagagtgttcaaaagtgagtgttcctaacactcctca 49242166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 157 - 300
Target Start/End: Complemental strand, 47009347 - 47009202
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| | |||||||||||||||||||||||  ||||||||||||||| ||||| | ||||||  |||| |||| ||||| ||||    
T  47009347 aacaccctctctaatactcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagcggtgagacaaacattaattt 47009248  T
Q  257 catccaataaatgagtgagtgctag--agagtgttgaaaagtgagt 300  Q
     |||||||||| |||||||||||||  ||||||||||||| |||||    
T  47009247 tatccaataaaagagtgagtgctagaaagagtgttgaaaaatgagt 47009202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 191 - 303
Target Start/End: Original strand, 46242000 - 46242112
Alignment:
Q  191 taaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttg 290  Q
    |||||||||||||||||| | |||||||| ||||||  ||||||||||||||||||||| ||||||||||| ||||| | |||||| ||||||||||||     
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaaagtgtgagttctagagagtgtta 46242099  T
Q  291 aaaagtgagtgtt 303  Q
    |||||||||||||    
T  46242100 aaaagtgagtgtt 46242112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 40991611 - 40991772
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||   |||  |  ||   ||||   ||||||||||| ||||||||    
T  40991611 aacactctctctgatactcactcttttattggtttaaatcattgtgggtctacacttcagaaatagtgccaatacaatggggtgggacatatattgattt 40991710  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||| || ||||||||| |  |||||||||||||||||||||||| ||||||||||||    
T  40991711 catccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcattcctc 40991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 31250930 - 31251016
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaat 268  Q
    |||||| |||||||||||||||||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||||||||    
T  31250930 ttattgatttaaatcattgtgggtctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttcatccaataaat 31251016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 45310976 - 45311078
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||| | |||||||||| |||||||||||||  |||| ||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||    
T  45310976 ctctctaatacttactctcttattgatttaaatcattgtaagtcttcactttgaaaattgaatccccacaaagtggtgggacatatattgatttcatcca 45311075  T
Q  263 ata 265  Q
    |||    
T  45311076 ata 45311078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 168 - 312
Target Start/End: Original strand, 10169678 - 10169822
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||| ||| |||||||||||||||||| ||||||| ||||   |||||||| ||||| | |||||| |||| ||||||| ||||||||||||||||||     
T  10169678 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtaggacatatattgatttcatccaataat 10169777  T
Q  268 tgagtgagtgctagagagtgttgaaaagtgagtgttactagcatt 312  Q
     |||||| |  |||||||||||||||||||| ||||  |||||||    
T  10169778 agagtgaatattagagagtgttgaaaagtgaatgttgttagcatt 10169822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 150 - 277
Target Start/End: Original strand, 50481562 - 50481687
Alignment:
Q  150 tgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacataca 249  Q
    ||||||||||||||||||||    ||| |||||||||||||||||| |||||| ||||||||||||||||  ||| ||  ||||| ||||| |||||||     
T  50481562 tgctagcaacactctctctaga--tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatact 50481659  T
Q  250 ttgatttcatccaataaatgagtgagtg 277  Q
    |||||||||||||||||| |||||||||    
T  50481660 ttgatttcatccaataaaagagtgagtg 50481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 157 - 272
Target Start/End: Complemental strand, 22542539 - 22542424
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| | ||||||||| ||||||||| ||||||||||||||||| |||  ||||||||| ||||||| |||||| |||||| |||||| |||||||    
T  22542539 aacactctttttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaaagtggtggaacatactttgattt 22542440  T
Q  257 catccaataaatgagt 272  Q
    ||| ||||||| ||||    
T  22542439 cattcaataaaagagt 22542424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 50571985 - 50571861
Alignment:
Q  194 atcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttga 291  Q
    ||||||| |||||||||||||||||| |||| || || ||| || |||| ||||||||||||||||| |||||| |||| ||||||||  ||||||||||    
T  50571985 atcattgcgggtctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaagagtaagtgctagagagagtgttga 50571886  T
Q  292 aaagtgagtgttactagcattcctc 316  Q
    ||||||| |||| ||| ||||||||    
T  50571885 aaagtgactgttgctaacattcctc 50571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 5044568 - 5044672
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||| ||| ||| ||||||||||||||| ||||||||||||| ||| |||| ||||| | |||||||| ||| |||||| ||||||||||||||    
T  5044568 ctctctaatattcattcttttattggtttaaatcgttgtgggtctacattttaaaaattgaactcacacaaaatagtgtgacatatattgatttcatcca 5044667  T
Q  263 ataaa 267  Q
    |||||    
T  5044668 ataaa 5044672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 29699645 - 29699522
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    ||||||| ||||||| ||| |||||||||| ||||||||||||| || ||| |||||||||   |||||  |||||| |||||||||||  |||||||||    
T  29699645 acactctatctaatattcactctcttattgttttaaatcattgtcgggctatactttgaaata-gaaccaacacaaagtggtgggacatgtattgatttc 29699547  T
Q  258 atccaataaatgagtgagtgctaga 282  Q
    |||||||||| ||||||||||||||    
T  29699546 atccaataaaagagtgagtgctaga 29699522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 157 - 284
Target Start/End: Original strand, 43124536 - 43124663
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| | |||||| || ||||||||||||||||||| |  ||||| |||| ||||||||   | ||  ||||||||||||||||||||||||||||    
T  43124536 aacactctttataatacgcactctcttattggtttaaatcttcatgggtatacagtttgaaaataaagcctacacaaaatggtgggacatacattgattt 43124635  T
Q  257 catccaataaatgagtgagtgctagaga 284  Q
    |||||| ||||||||||||  |||||||    
T  43124636 catccattaaatgagtgagcactagaga 43124663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 157 - 283
Target Start/End: Complemental strand, 52671988 - 52671862
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| ||||||||| | ||||||| ||||||||||||| |  | |||||||| |||| |||||   || |||||||||||||||||||| ||||    
T  52671988 aacactctctttaatactcactatcttattagtttaaatcattgagaatttacactttaaaaattgaacttacataaaatggtgggacatacatttattt 52671889  T
Q  257 catccaataaatgagtgagtgctagag 283  Q
    |||||||||||  ||||||| ||||||    
T  52671888 catccaataaaaaagtgagtactagag 52671862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 48339387 - 48339515
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct-- 279  Q
    ||||||||||||| |||| ||||||||| ||||||||| ||||||| |||||| |||||| ||||||||||||||  ||||||||  ||||||||| |      
T  48339387 ttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtgagtgttaa 48339486  T
Q  280 agagagtgttgaaaagtgagtgttactag 308  Q
    |||||||| | || |||||||||| ||||    
T  48339487 agagagtgctcaatagtgagtgttgctag 48339515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 143 - 285
Target Start/End: Complemental strand, 16178756 - 16178614
Alignment:
Q  143 agaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgg 241  Q
    |||||| |||||||||||||||||||||  |||| ||| ||||||| | |||||| ||| |  | ||||||||| |||  |||||| || ||| ||||||    
T  16178756 agaggagtgctagcaacactctctctaactctcactcttttattggatgaaatcaatgtagaacctacactttggaaatggaacccacataaagtggtgg 16178657  T
Q  242 gacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||||||||||||||||  ||||||| |||||||||||||||||    
T  16178656 gacatacattgatttcactcaataaa-gagtgagtgctagagag 16178614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 208 - 316
Target Start/End: Original strand, 42862494 - 42862604
Alignment:
Q  208 acactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgttac 305  Q
    ||||||||||||  |||||| || ||| ||||||||||||||||||||||| ||||||||  ||||||||||||||  |||| | ||||| ||||||||     
T  42862494 acactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaagagagtgttat 42862593  T
Q  306 tagcattcctc 316  Q
    |||||||||||    
T  42862594 tagcattcctc 42862604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 13070049 - 13069937
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgt--tgaaaagtgagtgtt 303  Q
    ||||||||||||||  |||||| || ||| |||||| |||||||||||||||| |||||||| ||||||||||||||||||||  | ||||| |||| ||    
T  13070049 ctacactttgaaaatggaacccacataaagtggtggaacatacattgatttca-ccaataaaagagtgagtgctagagagtgtgctcaaaagagagtatt 13069951  T
Q  304 actagcattcctca 317  Q
     |||||||||||||    
T  13069950 cctagcattcctca 13069937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 13520084 - 13519944
Alignment:
Q  180 tcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattga--tttcatccaataaatgagtgagtg 277  Q
    |||||||||||||||||||||||||| ||||| ||| |||| |||||| |||||| |||||| |||||||||||  ||| ||||||| ||  ||||||||    
T  13520084 tcttattggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgattttttatccaattaaatagtgagtg 13519985  T
Q  278 ct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||  ||||||| || |||| ||||| |  ||||||||||||    
T  13519984 ctacagagagtatttaaaaatgagtatcgctagcattcctc 13519944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 164 - 277
Target Start/End: Original strand, 25719141 - 25719255
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggt-ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    ||||||||||||| ||||| ||||| |||||||||||||||| ||||| |||| |||   ||||| || ||| ||||||||||||||||||||||| |||    
T  25719141 tctctaatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggacatacattgatttcaacca 25719240  T
Q  263 ataaatgagtgagtg 277  Q
    ||||  |||||||||    
T  25719241 ataagagagtgagtg 25719255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 46287573 - 46287441
Alignment:
Q  183 tattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctaga 282  Q
    |||||||||||||||||||| ||| |||||||||||| ||||  | |||||| | ||  |||||| ||| |||||||||||||||  ||| |||||||||    
T  46287573 tattggtttaaatcattgtgagtcaacactttgaaaattgaatacacacaaagtagtaagacatatattaatttcatccaataaaatagtaagtgctaga 46287474  T
Q  283 gag--tgttgaaaagtgagtgttactagcattc 313  Q
     |   | ||||||||||||||||||||||||||    
T  46287473 aaaaatattgaaaagtgagtgttactagcattc 46287441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 157 - 290
Target Start/End: Complemental strand, 19447290 - 19447156
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    |||||||||| ||||||||| ||||| ||||  |||||||||||| |||| | || ||||||||  |||||| || ||| ||||||||||||||||| ||    
T  19447290 aacactctctttaatactcactctctaattgagttaaatcattgtcggtcctgcattttgaaaatggaacccacataaagtggtgggacatacattggtt 19447191  T
Q  256 tcatccaataaatgagtgagtgctagagagtgttg 290  Q
    ||| |||||||  ||||| ||| | ||||||||||    
T  19447190 tcacccaataagagagtgggtgtttgagagtgttg 19447156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 37451042 - 37451165
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||||||| ||| ||||||||||||||||||| | ||||||||||||||||  |||  | |||||| ||||  ||  ||||| ||||  ||||||    
T  37451042 tctctaatactcactcttttattggtttaaatcattgcgagtctacactttgaaaatagaa--ctcacaaattggtaagatgtacatggattctatccaa 37451139  T
Q  264 taaatgagtgagtgctagagagtgtt 289  Q
    |||| ||||||||| |||||||||||    
T  37451140 taaaagagtgagtgttagagagtgtt 37451165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 157 - 284
Target Start/End: Original strand, 30866953 - 30867081
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtggg-tctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    |||||||||||||  ||||| | | ||||| | | ||| || |||||| |||||||||||||||  |||||| || ||| |||||||||||||||| |||    
T  30866953 aacactctctctagcactcatttttttattaggtgaaaacaatgtgggatctacactttgaaaatggaacccacataaagtggtgggacatacattaatt 30867052  T
Q  256 tcatccaataaatgagtgagtgctagaga 284  Q
    | ||||||||||  |||||||||||||||    
T  30867053 taatccaataaaaaagtgagtgctagaga 30867081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 47237842 - 47237923
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcct 315  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||  |||||||||| ||||| |||||||  ||||||||||    
T  47237842 tggtgggacatatattgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgatagcattcct 47237923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 4139002 - 4138913
Alignment:
Q  178 tctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    |||||||||| ||||||| |||| | |||||||||||| |||  ||| ||  | || |||||||||||||||||||||||||||||||||    
T  4139002 tctcttattgatttaaattattgcgagtctacactttggaaatagaatccataaaatatggtgggacatacattgatttcatccaataaa 4138913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 19937194 - 19937343
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| |||| |||| ||| || ||||||| ||||||||| | |||| ||||||||||  |||| | || | ||||||||||||||||||||||     
T  19937194 aacactctctttaattctcactcttttgttggtttgaatcattgtcgatctatactttgaaaatagaactcacatataatggtgggacatacattgattg 19937293  T
Q  257 catccaat-aaatgagtgagtgctagagagtgttgaaaagtgagtgttac 305  Q
     ||||||| |||  | | | ||||||||||  || |||||||||||||||    
T  19937294 tatccaattaaaaaattaaatgctagagagaatttaaaagtgagtgttac 19937343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 33995985 - 33996105
Alignment:
Q  185 ttggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagaga 284  Q
    |||||||||| ||||||| || || | |||||||| ||||||| || ||| ||||| ||||||||||||||| ||  |||||| |||||| || ||||||    
T  33995985 ttggtttaaaccattgtgagtttaaattttgaaaattgaacccacaaaaagtggtgagacatacattgatttgatttaataaaagagtgaatgttagaga 33996084  T
Q  285 --gtgttgaaaagtgagtgtt 303  Q
      ||||||||||| |||||||    
T  33996085 gtgtgttgaaaagagagtgtt 33996105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 312
Target Start/End: Complemental strand, 39016772 - 39016664
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg--ctagagagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  |||||| |  ||||||||||||||||||||||||||||||||||||  ||| ||||   ||||||||||| ||||| || ||||    
T  39016772 ctacactttggaaatggaacccacgtaaaatggtgggacatacattgatttcatccaataaaatagtaagtgttatagagagtgtttaaaagagaatgtt 39016673  T
Q  304 actagcatt 312  Q
     ||||||||    
T  39016672 gctagcatt 39016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 163 - 287
Target Start/End: Complemental strand, 38636489 - 38636365
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||| | | | |||||||| | ||||||||||||| |||||||||| |||| |  |||| || ||| | ||| ||||||||||||||| ||| |    
T  38636489 ctctctaatatttattttcttattgatataaatcattgtggatctacactttaaaaattagacccacataaagtagtgagacatacattgattttatcaa 38636390  T
Q  263 ataaatgagtgagtgctagagagtg 287  Q
    ||||| ||||||||| | |||||||    
T  38636389 ataaaagagtgagtggtggagagtg 38636365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 50652343 - 50652468
Alignment:
Q  146 ggaatgctagcaacactctctctaat----actcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgg 241  Q
    ||||| ||||||||||||||||||||    | ||| | |||||||| ||||||| |||||  ||||||| |||||||| ||||||  |||||| |||||     
T  50652343 ggaatactagcaacactctctctaattaatattcactttcttattgatttaaattattgtacgtctacattttgaaaattgaacctacacaaagtggtga 50652442  T
Q  242 gacatacattgatttcatccaataaa 267  Q
    || |||||||||||| || |||||||    
T  50652443 gatatacattgattttatgcaataaa 50652468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 303
Target Start/End: Original strand, 1559806 - 1559887
Alignment:
Q  224 acccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||| ||||| ||||||||||||| |||||| ||| ||||||| |||||||||||  |||||||||  |||||||||||||    
T  1559806 accccaacaaattggtgggacatacgttgattccattcaataaaggagtgagtgctaaagagagtgtacaaaagtgagtgtt 1559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 2187885 - 2188001
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    |||||||||||||| ||||||| || ||| ||||||||||| ||||||||||| |||||||| ||| ||  |||  |||||||| | ||||| |||||||    
T  2187885 ctacactttgaaaa-tgaacccacataaagtggtgggacattcattgatttcacccaataaaagagcgaaagctagagagagtgctcaaaagagagtgtt 2187983  T
Q  304 actagcattcctcaacac 321  Q
     ||| |||| ||||||||    
T  2187984 cctaacattgctcaacac 2188001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 316
Target Start/End: Complemental strand, 22592390 - 22592301
Alignment:
Q  229 cacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| |||||||||| ||||| ||||||||||||||| |||||||||| ||||||  |||| ||||||||| ||| ||| || |||||    
T  22592390 cacaaagtggtgggacaaacatttatttcatccaataaaagagtgagtgccagagagaatgttcaaaagtgagcgttgctatcaatcctc 22592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 159 - 279
Target Start/End: Complemental strand, 51206200 - 51206079
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    |||||||||||  ||||| ||| ||||||| | |||||| ||| || | |||| ||||||||   ||| | || ||| || |||||||||||||||||||    
T  51206200 cactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcacataaagtgatgggacatacattgatttc 51206101  T
Q  258 atccaataaatgagtgagtgct 279  Q
    ||| ||||||||||||||||||    
T  51206100 atctaataaatgagtgagtgct 51206079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 11895186 - 11895134
Alignment:
Q  166 tctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaa 218  Q
    |||| |||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  11895186 tctattactcactctcttattcgttcaaatcattgtgggtctacactttgaaa 11895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 38537535 - 38537648
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttg---aaaactgaacccccacaaaatggtgggacatacattga 253  Q
    |||||||||||||||| ||| ||| |||||| ||||||||||| ||  |||||||||||   |||| ||||| |  ||||| | ||  ||||||||||||    
T  38537535 aacactctctctaataatcattcttttattgatttaaatcattatgaatctacactttgttgaaaattgaactcatacaaagtagtaagacatacattga 38537634  T
Q  254 tttcatccaataaa 267  Q
    ||||||| ||||||    
T  38537635 tttcatcaaataaa 38537648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 43958234 - 43958152
Alignment:
Q  232 aaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcatt 312  Q
    ||||||||||||||||||||||||  || ||||||| |||||| ||||||||||  |||| |||| |||||||| ||| ||||    
T  43958234 aaaatggtgggacatacattgattctattcaataaaagagtgaatgctagagagaatgttaaaaactgagtgttgctaacatt 43958152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 52279281 - 52279348
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaa 224  Q
    |||||||| ||||||| ||| |||| ||||| | |||||||||||||||||| |||||||||| ||||    
T  52279281 aacactctatctaatattcactctcctattgatctaaatcattgtgggtctaaactttgaaaattgaa 52279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 280
Target Start/End: Original strand, 45081773 - 45081887
Alignment:
Q  166 tctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaata 265  Q
    ||||||||||| ||| |||||||||||||| |||||| || ||||||||| |||  | |||| ||||||||||| | |||| |||  ||| |||| ||||    
T  45081773 tctaatactcactcttttattggtttaaattattgtgagtgtacactttggaaataggacccacacaaaatggtagaacatgcatgtattccatcaaata 45081872  T
Q  266 aatgagtgagtgcta 280  Q
    || || | |||||||    
T  45081873 aaagaataagtgcta 45081887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 49682838 - 49682936
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcta 280  Q
    |||||||||||||||  ||||| ||||||||||||||| ||||  |  | ||| ||||| || ||||||||||||||||| |||||  ||||| |||||    
T  49682838 ttattggtttaaatcgatgtggctctacactttgaaaattgaattcaaataaagtggtgagatatacattgatttcatccgataaaaaagtgaatgcta 49682936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 54543512 - 54543454
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcatt 199  Q
    ||||| || ||||||||||||||||||||||||||  | | ||||||||||||||||||    
T  54543512 aaagatgagtgctagcaacactctctctaatactcttttttttattggtttaaatcatt 54543454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 2088735 - 2088815
Alignment:
Q  205 tctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||||||| |||  ||| || || ||| |||||||||||||||||||||||  |||| || ||||||||| |||||||    
T  2088735 tctacactttggaaatggaatccacataaagtggtgggacatacattgatttcactcaattaaagagtgagtgttagagag 2088815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 316
Target Start/End: Complemental strand, 42862490 - 42862415
Alignment:
Q  243 acatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||| |||||||||| |||||||| |||||||||||||  | |||| | ||||| ||||||| ||||||||||||    
T  42862490 acataaattgatttcacccaataaaagagtgagtgctagatatagtgctcaaaagagagtgttgctagcattcctc 42862415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 246 - 315
Target Start/End: Original strand, 51206157 - 51206228
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcct 315  Q
    ||||||||||||| |||||||| |||||||||||  |||||||| | ||||| ||||||| |||| ||||||    
T  51206157 tacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagtattcct 51206228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 381
Target Start/End: Complemental strand, 1073099 - 1073048
Alignment:
Q  330 accataaacgtcacatttaacaaaaagatggtcaatgtcctcattctcacca 381  Q
    ||||||||  |||||||||||||||||||||||||| ||| | |||||||||    
T  1073099 accataaaaatcacatttaacaaaaagatggtcaatatccacgttctcacca 1073048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 11895133 - 11895083
Alignment:
Q  269 gagtgagtgctagagagt--gttgaaaagtgagtgttactagcattcctca 317  Q
    ||||| |||||||||||   |||||||||||||||||||||||||||||||    
T  11895133 gagtgggtgctagagagatggttgaaaagtgagtgttactagcattcctca 11895083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 41153245 - 41153340
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    |||||||| ||||||||||||  | ||||||||  |||  |||||  |||||| ||||||||||| |||  ||||||||||||||| |||| ||||    
T  41153245 ttattggtctaaatcattgtgaatgtacactttagaaatagaacctacacaaagtggtgggacatgcatgaatttcatccaataaaagagtaagtg 41153340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 50879549 - 50879471
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtga 298  Q
    |||||| || ||||||||||||||| |||  ||| ||| ||||||| |||||||||||||  |||||||| ||||||||    
T  50879549 gaacccacataaaatggtgggacatgcatgaattccattcaataaaagagtgagtgctagaaagagtgttcaaaagtga 50879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 1559936 - 1559990
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacac 211  Q
    ||||||||| |||||| | ||| |||||||||||||||||||| || ||||||||    
T  1559936 aacactctcactaatattgaatttcttattggtttaaatcattttgagtctacac 1559990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 19321901 - 19321947
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtc 206  Q
    ||||||||||||||| | |||||||||||||| |||||||| |||||    
T  19321901 actctctctaatacttactctcttattggtttgaatcattgcgggtc 19321947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 263
Target Start/End: Original strand, 28304030 - 28304144
Alignment:
Q  150 tgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtct-acactttgaaaactgaacccccacaaaatggtgggacatac 248  Q
    ||||||||||||||||||||| || || | | ||||||  ||||||||  |||| ||  ||||||||||||  || ||| |  ||| ||||||||||| |    
T  28304030 tgctagcaacactctctctaacacccacttttttattgacttaaatcaaggtggatcacacactttgaaaatggaccccactaaaagtggtgggacatgc 28304129  T
Q  249 attgatttcatccaa 263  Q
    |||||||||||||||    
T  28304130 attgatttcatccaa 28304144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 37315674 - 37315743
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgcta--gagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||||||||||||| |||||||| ||||||||||||  ||||||| | ||||  ||||||| |||||||||    
T  37315674 tacattgatttcacccaataaaagagtgagtgctaatgagagtgctcaaaaaagagtgttgctagcattc 37315743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 40662037 - 40662107
Alignment:
Q  247 acattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||| |||| |||||||||  |||||| || ||||||||||||||||  ||||||  |||||||||||||    
T  40662037 acattaattttatccaataagagagtgaatgttagagagtgttgaaaaaagagtgtctctagcattcctca 40662107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 40812103 - 40812034
Alignment:
Q  249 attgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||| |||||||| |||||||||||||  |||||||| ||||  ||||||| ||||||| ||||    
T  40812103 attgatttcacccaataaaagagtgagtgctagagagagtgttcaaaaaagagtgttgctagcatacctc 40812034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 44832546 - 44832496
Alignment:
Q  232 aaaatggtgggacatacattgatttcatccaataaatgagtgagtgctaga 282  Q
    |||||||||||||||||||| |||||| ||||||||  |||||||| ||||    
T  44832546 aaaatggtgggacatacattaatttcacccaataaaaaagtgagtgataga 44832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 49769851 - 49769941
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagt 272  Q
    ||||| |||||||||||||| ||| || ||||||||||   ||| | || ||||| |||||| |||  |||||||||||||||||| ||||    
T  49769851 ttattagtttaaatcattgtaggtttatactttgaaaataaaactcacataaaatagtgggatatattttgatttcatccaataaaagagt 49769941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 2861008 - 2860899
Alignment:
Q  184 attggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagag 283  Q
    ||||| |||||  ||||||| ||||||||||||||| |||| || || |||  | ||| | ||||||| ||||||||||| |||  ||||||| | | ||    
T  2861008 attggcttaaactattgtggatctacactttgaaaattgaatccacagaaagggatggaaaatacattaatttcatccaacaaaaaagtgagtaccaaag 2860909  T
Q  284 agtgttgaaa 293  Q
    ||||||||||    
T  2860908 agtgttgaaa 2860899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 21776946 - 21776995
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||| |||||||||||||||| |||||||||| |||||| || |||||||    
T  21776946 tggtaggacatacattgattttatccaataaaagagtgaatgttagagag 21776995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 44832577 - 44832649
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||| ||||||||  | ||||||||  |||||||| | ||||| ||||||| ||||||||||||    
T  44832577 tacattgatttcacccaataaaaaaatgagtgctggagagagtgctcaaaagagagtgttgctagcattcctc 44832649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 46536295 - 46536384
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    ||||| ||| |||||||||| ||||||  | ||||||| ||||||||||||| |||||   |||||| ||||  |||||| |||||||||    
T  46536295 taatattcactctcttattgctttaaaatagtgtgggtttacactttgaaaattgaacatacacaaagtggtatgacatatattgatttc 46536384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 47237800 - 47237768
Alignment:
Q  253 atttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||||||||||| |||||||||||||||||    
T  47237800 atttcatccaataaaagagtgagtgctagagag 47237768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 53871010 - 53871046
Alignment:
Q  280 agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  53871010 agagagtgttggaaagtgagtgttgctagcattcctc 53871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 1e-55; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 16983552 - 16983391
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||| | ||||||    
T  16983552 aacactctctctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaagtgatgggacataaaatgattt 16983453  T
Q  257 catccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
     ||||||||||| ||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  16983452 tatccaataaatcagtgagtgctagatagagtgttgaaaagtgagtgttgctagcattcctc 16983391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 142 - 312
Target Start/End: Complemental strand, 32072270 - 32072098
Alignment:
Q  142 aagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgg 241  Q
    ||||| |||||||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||||||| |||| ||||||| |||||| ||||||    
T  32072270 aagagtaatgctagcaacactctctctaatgcccattctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgg 32072171  T
Q  242 gacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcatt 312  Q
    |||||||||| ||||||||||||||| |||||||||||||  ||||||||||||||||| |||| ||||||||    
T  32072170 gacatacattcatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 32072098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 144 - 316
Target Start/End: Complemental strand, 8914942 - 8914768
Alignment:
Q  144 gaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtggga 243  Q
    |||||||||||||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  8914942 gaggaatgctagcaacactctctctgtcacccactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtggga 8914843  T
Q  244 catacattgatttcatccaataaatgagtgagtgctagagagtgt--tgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||| ||| ||||||| || ||||||||| ||||||| |   | ||||||||||||| ||||||||||||    
T  8914842 catacattggttttatccaatgaaagagtgagtgttagagagagcgctcaaaagtgagtgttgctagcattcctc 8914768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 1977195 - 1977356
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  1977195 aacacactctctaatactcactcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttggacatacattgattt 1977294  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||| | | |||||||||||  |||||||||| |||||||||| || ||||||||||||    
T  1977295 catccaacagaagagtgagtgctagagagagtgttaaaaagtgagtattgctagcattcctc 1977356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 34861214 - 34861368
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| ||| |||||||||| |||||||||||||||||| ||||||||     |||||||||| ||||||  |||||| |||||||||||||||||||||    
T  34861214 aacaccctccctaatactcactctcttattggtttaaattattgtggg-----actttgaaaattgaacctacacaaagtggtgggacatacattgattt 34861308  T
Q  257 catccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||    
T  34861309 catccaataaaagagtgagtgctagagagtgttgaaaagtgagaggtgctagcattcctc 34861368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 17499258 - 17499383
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcat 259  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||    
T  17499258 actctctctaatactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcat 17499357  T
Q  260 ccaataaatgagtgagtgctagagag 285  Q
    |||||||| ||  |||||||||||||    
T  17499358 ccaataaaagatagagtgctagagag 17499383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 9952779 - 9952941
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||  |||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||| | |||||| ||||||||||| |||||||||    
T  9952779 aacactctcttaaatactcattatcttattggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtggtgggacatgcattgattt 9952878  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||||||  | ||||||||  ||||||||||||||||| | ||||||||||||| ||||    
T  9952879 catccaataaaaaaatgagtgctagagagagtgttgaaaagtaaatgttactagcatttctca 9952941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 150 - 316
Target Start/End: Complemental strand, 43506698 - 43506535
Alignment:
Q  150 tgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacataca 249  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||||||||||||||||||| ||||||   |||||| |||||| |||||| |||||||    
T  43506698 tgctagcaacactctct--aatactcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacataca 43506601  T
Q  250 ttgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||  ||||||||||  |||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  43506600 ttgattatatccaataaa-aagtgagtgttagagagtgttcaaaagtgagtgttgctagcattcctc 43506535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 178 - 313
Target Start/End: Complemental strand, 8903989 - 8903852
Alignment:
Q  178 tctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||||||||| ||||||  |||||||     
T  8903989 tctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgggacatacattgatttcatcaaataaacaagtgagta 8903890  T
Q  278 ct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||  ||||||||||||||| |||||||| ||| |||||    
T  8903889 ctagagagagtgttgaaaaatgagtgttgctaacattc 8903852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 167 - 313
Target Start/End: Original strand, 28413901 - 28414049
Alignment:
Q  167 ctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataa 266  Q
    |||||||||| ||| |||||||||||||||||| |||||||| |||||||||| ||||| | |||||| ||||||||||||||||||||||||| |||||    
T  28413901 ctaatactcattcttttattggtttaaatcattatgggtctatactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataa 28414000  T
Q  267 atgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |  |||||| |||  ||||||||||||||||||||||||  ||||||||    
T  28414001 aaaagtgagcgctagagagagtgttgaaaagtgagtgttgttagcattc 28414049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 35151751 - 35151913
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| | ||||| ||| | ||||||| |||| ||| |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||    
T  35151751 aacactctatttaatattcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaaaatggtgggacatacattgattt 35151850  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||| |||| | ||||  | |||||||| ||||||||||||| |||| ||||||||    
T  35151851 catccaataaaagagtaaatgctaaaaagagtgttaaaaagtgagtgttgctagtattcctca 35151913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 150 - 317
Target Start/End: Complemental strand, 41727595 - 41727426
Alignment:
Q  150 tgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacataca 249  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||| || |||||||| || ||||| |||||  ||||||  |||||||||||||    
T  41727595 tgctagcaacactctctctaatactcactctcttgttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacataca 41727496  T
Q  250 ttgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||| ||| || ||| |||||| ||||  |||||||||| |||||||||||||   |||||||||||    
T  41727495 ttgattttatctaacaaaagagtgattgctaaagagagtgttcaaaagtgagtgttgtcagcattcctca 41727426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 157 - 315
Target Start/End: Complemental strand, 5980037 - 5979878
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||| ||  |||||||||||| ||||||| |||||| ||||||||||||||||||| |    
T  5980037 aacactctctctaatactcactctcttattggtt-aaaccattgtgagttcacactttgaaaattgaacccacacaaagtggtgggacatacattgatct 5979939  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcct 315  Q
    ||||||||| | |||||  | ||  ||||||||||||||||| |||||| |||||||||||    
T  5979938 catccaatagaagagtgtctactagagagagtgttgaaaagtaagtgttgctagcattcct 5979878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 157 - 303
Target Start/End: Original strand, 24055947 - 24056095
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||   |||||| |||||||||||||||| ||||    
T  24055947 aacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgggacatacattaattt 24056046  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||  ||||| ||| |||||||  |||||| |||||||||||||||||    
T  24056047 catctgataaaagagcgagtgctaaagagagcgttgaaaagtgagtgtt 24056095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 6387719 - 6387564
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||||||| ||||| ||||||||||| ||||| || |||||||| || |||||| |||  |||||| || |||||||||||||||||||||||||    
T  6387719 acactctctctaacactcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaacccacataaaatggtgggacatacattgattt 6387620  T
Q  257 catccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcatt 312  Q
     |||||||||| ||||||||| ||||||||||  ||||| ||||||| ||||||||    
T  6387619 tatccaataaaagagtgagtgttagagagtgtccaaaagagagtgttgctagcatt 6387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 17741534 - 17741659
Alignment:
Q  142 aagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgg 241  Q
    ||||| ||||||||| | ||||||||||||||||| |   ||||||||||||| |||| | ||||||||||||||||| ||||| | |||||||||||||    
T  17741534 aagagtaatgctagcgatactctctctaatactcatttctttattggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgg 17741633  T
Q  242 gacatacattgatttcatccaataaa 267  Q
    ||||||||||||||||||||||||||    
T  17741634 gacatacattgatttcatccaataaa 17741659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 35797567 - 35797426
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtg 240  Q
    |||||| ||||||| |||||||||||  ||||||||  ||||||||| ||||||||||||||| | |||||||| |||| ||||| | |||||| |||||    
T  35797567 aaagagtaatgctaacaacactctctacaatactca--ctcttattgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtg 35797470  T
Q  241 ggacatacattgatttcatccaataaatgagtgagtgctagaga 284  Q
    | |||||||||||||| |||||||||| |||||| |||||||||    
T  35797469 gaacatacattgattttatccaataaaagagtgaatgctagaga 35797426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 143 - 318
Target Start/End: Complemental strand, 14236510 - 14236333
Alignment:
Q  143 agaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtggg 242  Q
    |||| |||| |||||||||||||||||||||||| |||||| ||||||||||| |||||| | ||||||||| |||| |||||   |||||| |||||||    
T  14236510 agagcaatgttagcaacactctctctaatactcactctcttgttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtggg 14236411  T
Q  243 acatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||||  || ||||| |||||||||  | |||||| |||  | |||||||||||| |||||||  || ||||||||||    
T  14236410 acatattttaatttcttccaataaaaaaatgagtggtagaaaaagtgttgaaaagagagtgttgttaacattcctcaa 14236333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 17716977 - 17716863
Alignment:
Q  189 tttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgt 288  Q
    ||||| ||||||||||||||||||||||||| | ||||| || ||||| |||||||||| |||||||||||||||||||   ||||||| || ||||||     
T  17716977 tttaactcattgtgggtctacactttgaaaattaaacccacataaaatagtgggacatatattgatttcatccaataaaactgtgagtgttaaagagtga 17716878  T
Q  289 tgaaaagtgagtgtt 303  Q
    |||||||||||||||    
T  17716877 tgaaaagtgagtgtt 17716863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 23685285 - 23685131
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||| |    |||||||||||||||||||| |  ||||||||||| |||  |||| | || ||| |||||||||||||||||||||    
T  23685285 aacactctctctaatactaa----cttattggtttaaatcattgcgaatctacactttggaaatagaactcgcataaagtggtgggacatacattgattt 23685190  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||||||||  |||||||||  |||||||| |||| |||||||||    
T  23685189 catccaataaaatagtgagtgcttaagagagtgtgcaaaagtgaatgttgctagcattc 23685131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 36804860 - 36804970
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    ||||| ||||||||||||| | |||||||||| ||||||| ||||||| | || | |||||||| ||||||| |||||||||||||||||||||||||||    
T  36804860 caacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaacccacacaaaatggtgggacatacattgatt 36804959  T
Q  256 tcatccaataa 266  Q
     ||||||||||    
T  36804960 ccatccaataa 36804970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 13407345 - 13407474
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    |||||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||||||||||||  |||||| |  ||||||||||||||||||||||||    
T  13407345 aacactctctctaacactcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccacttaaaatggtgggacatacattgatt 13407444  T
Q  256 tcatccaataaatgagtgagtgctagagag 285  Q
    | ||||||||||  ||| |||| |||||||    
T  13407445 ttatccaataaaaaagttagtgttagagag 13407474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 164 - 316
Target Start/End: Complemental strand, 31301265 - 31301112
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    |||| |||| ||| |||||||||||||||||| ||| ||  ||||||| |||||||  |||| | |||||| |||||| |||||||||||||||||||||    
T  31301265 tctcaaatattcattctcttattggtttaaattattatga-tctacacattgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaa 31301167  T
Q  264 taaatgagtgagtgc--tagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| ||||||||||   | | |||||| |||||||||||||| |||||||||||    
T  31301166 taaaagagtgagtgccggaaatagtgttcaaaagtgagtgttattagcattcctc 31301112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 13214653 - 13214543
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||||| |||||||||  ||||||||| ||||| |  ||||||||||||||||||||||| |||| |  ||||||||| ||||||||||||| |||     
T  13214653 aacactctccctaatactcgctctcttattagtttataatattgtgggtctacactttgaaaattgaatctacacaaaatgatgggacatacattaattc 13214554  T
Q  257 catccaataaa 267  Q
    |||||||||||    
T  13214553 catccaataaa 13214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 313
Target Start/End: Complemental strand, 45246571 - 45246432
Alignment:
Q  178 tctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    |||||||||| ||||||||||||  | ||||||||||| |||  |||| | || ||| ||||| ||||||||||||||| ||||||||||  ||||||||    
T  45246571 tctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgattttatccaataaaatagtgagtg 45246472  T
Q  278 ct--agagagtgt-tg-aaaagtgagtgttactagcattc 313  Q
    ||  ||||||||| || |||||||||||||||||||||||    
T  45246471 ctaaagagagtgtgtgcaaaagtgagtgttactagcattc 45246432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 11962729 - 11962850
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct-- 279  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||  || |||||||||||| |||| ||||||| || ||||||| ||||||||  |      
T  11962729 ttattggtttaaatcatt-tggatctacactttgaaaattgaacctacataaaatggtgggatatactttgattttattcaataaaagagtgagtattaa 11962827  T
Q  280 agagagtgttgaaaagtgagtgt 302  Q
    |||| ||||||||||||||||||    
T  11962828 agagcgtgttgaaaagtgagtgt 11962850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 7493364 - 7493426
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaa 219  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  7493364 aacactctttctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaa 7493426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 6098799 - 6098925
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||| |||||   |||||| |||||||| ||||  | ||||    
T  6098799 aacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaattgaacatgcacaaagtggtgggatatac--taattt 6098896  T
Q  257 catccaataaatgagtgagtgctagagag 285  Q
    ||||| |||||   ||||||| |||||||    
T  6098897 catcctataaaaatgtgagtgttagagag 6098925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 34952601 - 34952504
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgat 254  Q
    |||||||||||||||||| | | |  | |||||||||||||||| |||||||||  ||||||| ||||  ||||||||||||||||||||||||||||    
T  34952601 aacactctctctaatacttatttttctcttggtttaaatcattgcgggtctacatattgaaaattgaaatcccacaaaatggtgggacatacattgat 34952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 35689637 - 35689510
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtct-acactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    |||||||||||  ||||| | | ||||||| | ||| || |||||| || ||||||||||||  |||| | || ||| ||||||||||||||||||||||    
T  35689637 cactctctctagcactcacttttttattgggtgaaaacaatgtgggacttacactttgaaaatggaactcacataaagtggtgggacatacattgatttc 35689538  T
Q  258 atccaataaatgagtgagtgctagagag 285  Q
    ||||||||||  ||||||||||||||||    
T  35689537 atccaataaaaaagtgagtgctagagag 35689510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 35819265 - 35819198
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacataca 249  Q
    ||||| ||||||||||||||||||||| |||||||||| ||| ||| |||||||||||||||||||||    
T  35819265 ttattagtttaaatcattgtgggtctatactttgaaaattgagcccacacaaaatggtgggacataca 35819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 266
Target Start/End: Complemental strand, 9453637 - 9453511
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggt 239  Q
    |||||| | ||||||||||||||||| ||||||||| ||||| ||||| |||||||  |||||||| |||| ||||||||  |||||| |  ||| || |    
T  9453637 aaagagtagtgctagcaacactctctttaatactcactctctaattgggttaaatctatgtgggtcatacattttgaaaagggaacccacgtaaagtgat 9453538  T
Q  240 gggacatacattgatttcatccaataa 266  Q
    ||||||| ||||| |||||||||||||    
T  9453537 gggacatgcattggtttcatccaataa 9453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 1423855 - 1423746
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtg--agtgctagagagtgttgaaaagtgagtgtt 303  Q
    |||||||||||||| ||||| |  ||||| |||| |||||||||||||||| ||| |||||| |||||  | | ||| ||||||||||||||||||||||    
T  1423855 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactaaagagtgttgaaaagtgagtgtt 1423756  T
Q  304 actagcattc 313  Q
     |||| ||||    
T  1423755 gctagtattc 1423746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 39023509 - 39023460
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  39023509 tggtgggacatacattgatttcatccaataaataaatgagtgctagagag 39023460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 1961400 - 1961312
Alignment:
Q  197 attgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||| ||||||||||||||||| ||||||| | |||| ||||||||| ||| ||||||| |||||||||| || | |||| |||||||    
T  1961400 attgttggtctacactttgaaaattgaacccacgcaaagtggtgggacgtaccttgattttatccaataaaagattaagtggtagagag 1961312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 246 - 319
Target Start/End: Original strand, 13856506 - 13856581
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaac 319  Q
    |||||||||||||||||||||| ||||| ||| |  |||||||||||| |||||  ||||||||||||||||||||    
T  13856506 tacattgatttcatccaataaaagagtgggtgttagagagagtgttgagaagtggatgttactagcattcctcaac 13856581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 557 - 609
Target Start/End: Original strand, 33177989 - 33178041
Alignment:
Q  557 ttgtaagcactacttacagtataacaattagatgaatgcaaatgccaaatcca 609  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  33177989 ttgtaagcactactaacagaataacaatgagatgaatgcaaatgccaaatcca 33178041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 45218618 - 45218698
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||  |||||||||||||||||||| ||| ||||| ||||||||||  ||||| ||||||  ||||||||||||    
T  45218618 tggtgggacacgcattgatttcatccaataaaagagcgagtgttagagagtgtataaaagagagtgtccctagcattcctc 45218698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 9192126 - 9192055
Alignment:
Q  190 ttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcc 261  Q
    ||||||||||||| ||||||| ||| |||| ||||||| |||||| |||||||| |||||||||||| ||||    
T  9192126 ttaaatcattgtgagtctacaatttaaaaattgaacccacacaaagtggtgggatatacattgattttatcc 9192055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 28211973 - 28212036
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||||| || ||||||||| |||||| |||||||||| ||||||||| ||||||||||||||||    
T  28211973 gaacccacataaaatggtgagacatatattgatttcacccaataaataagtgagtgctagagag 28212036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 276
Target Start/End: Complemental strand, 4675064 - 4674949
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| ||||||| ||| | | ||||||||||||||||||||| | |||||||||||||| | ||| | |||||| || | ||    ||||||||||    
T  4675064 aacactctttctaatattcatttttttattggtttaaatcattgtgtgactacactttgaaaattaaactcacacaaagtgatagg----acattgattt 4674969  T
Q  257 catccaataaatgagtgagt 276  Q
    |||| |||||| ||||||||    
T  4674968 catctaataaaagagtgagt 4674949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 10868094 - 10868012
Alignment:
Q  212 tttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaa 294  Q
    |||||||| |||| || ||||||||||||  ||||||||||| |||||||||||||  | | |||| ||||||||||||||||    
T  10868094 tttgaaaattgaatccacacaaaatggtgaaacatacattgagttcatccaataaaaaaataagtgatagagagtgttgaaaa 10868012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 7599493 - 7599605
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  |||||| || ||| || ||||| ||||||||||||||||||||||| ||||  |||||  |||||||||| ||||  |||||||    
T  7599493 ctacactttggaaaaggaacccacataaagtgctgggatatacattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaaaagagtgtt 7599592  T
Q  304 actagcattcctc 316  Q
     ||| ||||||||    
T  7599593 gctaacattcctc 7599605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 43026400 - 43026296
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttac 305  Q
    |||||||||| |||  |||||| || ||| |||  |||||||||||||||| | | ||||||  |||||||||||||||||||| ||||| || |||| |    
T  43026400 ctacactttggaaatggaacccacataaagtggcaggacatacattgattttacctaataaaaaagtgagtgctagagagtgtttaaaagagaatgttgc 43026301  T
Q  306 tagca 310  Q
    |||||    
T  43026300 tagca 43026296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 5095788 - 5095826
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgt 201  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  5095788 ctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 9193515 - 9193421
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagt 276  Q
    |||||||||| ||| ||||| ||||||||||||||||| |||||   |||||| | ||| |||||||| | |||||||| |||||| || |||||    
T  9193515 ttattggttttaattattgtaggtctacactttgaaaattgaacttacacaaagtagtgagacatacactaatttcatcaaataaaagaatgagt 9193421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 5726414 - 5726345
Alignment:
Q  216 aaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||| |||| ||||| |||||||||||| ||||||| |||||||||||||||| | | | ||||||||||    
T  5726414 aaaattgaaaccccataaaatggtgggatatacattaatttcatccaataaataactaaatgctagagag 5726345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 316
Target Start/End: Complemental strand, 36629817 - 36629656
Alignment:
Q  156 caacactctctctaatactcaatctctt-attggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgat 254  Q
    ||||||||||||||||||||| | | || ||||||||| ||||||| |||||||||| ||| |||  |||  |||||| | || |   ||||||||| ||    
T  36629817 caacactctctctaatactcattttttttattggtttagatcattgcgggtctacacattggaaatagaa--cccacacagtgataatacatacatttat 36629720  T
Q  255 ttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| |||||| |||| ||||||  ||| |||||| |||| ||||| ||  |||||||||||    
T  36629719 ttcatctaataaaagagtaagtgctaaagatagtgttcaaaaatgagtattgttagcattcctc 36629656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 3099691 - 3099783
Alignment:
Q  184 attggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagt 276  Q
    |||||||||||| |||||| | ||| |||||| |||   ||| | ||||||||||||| ||||||||||||| |||| |||||| || |||||    
T  3099691 attggtttaaattattgtgagactatactttggaaatataactcacacaaaatggtggaacatacattgattccatctaataaaagaatgagt 3099783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 1205936 - 1205829
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  ||||||  | ||| ||||| |||||||||| |||| | | |||||| |||||||||||  |||||||| | ||||| |||||||    
T  1205936 ctacactttggaaatagaacccatataaagtggtgagacatacattaattttacctaataaaagagtgagtgctaaagagagtgctcaaaagagagtgtt 1205837  T
Q  304 actagcat 311  Q
     |||||||    
T  1205836 gctagcat 1205829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 17915970 - 17915926
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgt 201  Q
    |||||||||||||||||||| | | ||||| ||||||||||||||    
T  17915970 aacactctctctaatactcactttattattagtttaaatcattgt 17915926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 31691625 - 31691692
Alignment:
Q  249 attgatttcatccaataaatgagtgagtgcta--gagagtgttgaaaagtgagtgttactagcattcc 314  Q
    ||||||||| | ||||||| ||||||||| ||  |||||| || ||||||||||||| ||||||||||    
T  31691625 attgatttcgttcaataaaagagtgagtgttaaagagagttttcaaaagtgagtgttgctagcattcc 31691692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 34952494 - 34952458
Alignment:
Q  280 agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  34952494 agagagtgttaaaaagtgagtgttgctagcattcctc 34952458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 3e-53; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 157 - 312
Target Start/End: Complemental strand, 34905494 - 34905337
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||    
T  34905494 aacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgattt 34905395  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    ||||||||||| ||||||||| |  ||||||||||||||| |||||||| ||||||||    
T  34905394 catccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgttgctagcatt 34905337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 139 - 317
Target Start/End: Complemental strand, 445994 - 445814
Alignment:
Q  139 ccaaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatgg 238  Q
    |||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||| ||||||| |||||| |||    
T  445994 ccaaggagaaatcctagcaacactctctctaatactcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtgg 445895  T
Q  239 tgggacatacattgatttcatccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgttactagcattcctca 317  Q
    || ||||||||||||||||||||||||||  ||||||||||||||  ||||||||||| ||||| || |||||||||||||    
T  445894 tgtgacatacattgatttcatccaataaaaaagtgagtgctagagatagtgttgaaaaatgagtattgctagcattcctca 445814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 142 - 312
Target Start/End: Complemental strand, 32122968 - 32122796
Alignment:
Q  142 aagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgg 241  Q
    ||||| ||||||||||||||| |||||| || ||| | | ||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  32122968 aagagtaatgctagcaacactatctctattattcacttttttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgg 32122869  T
Q  242 gacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    |||||| |||||||||||||||||||| |||||||| |  | |||||||||||||| |||||||  |||||||    
T  32122868 gacatatattgatttcatccaataaataagtgagtggtggaaagagtgttgaaaagagagtgttgttagcatt 32122796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 168 - 313
Target Start/End: Original strand, 10133191 - 10133338
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||| | |||||||||||||||    
T  10133191 taatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcatccaataaa 10133290  T
Q  268 tgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||| |  |||||||||||||||||||||||| ||| |||||    
T  10133291 tgagtgagtgttagagagagtgttgaaaagtgagtgtttctaccattc 10133338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 141 - 303
Target Start/End: Original strand, 31116130 - 31116294
Alignment:
Q  141 aaagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtg 240  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||  |||| | |||||| | |||    
T  31116130 aaagaggagtgctagcaacactctctctaatactcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtg 31116229  T
Q  241 ggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||||||||||||||||||||||| | |||||| || |  |||||||||| |||||||||||||    
T  31116230 ggacatacattgatttcatccaatagaagagtgaatgttagagagagtgttcaaaagtgagtgtt 31116294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 157 - 303
Target Start/End: Complemental strand, 5106456 - 5106308
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||| ||| ||| ||||||||||||||| |||||||| ||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  5106456 aacacactctctaatattcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacacaaagtggtgggacatacattgattt 5106357  T
Q  257 catccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgtt 303  Q
     ||||||||||  |||||||| |||||  ||||||||||||||||||||    
T  5106356 tatccaataaaaaagtgagtgttagagaaagtgttgaaaagtgagtgtt 5106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 1392785 - 1392630
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||| ||||| |  ||||| | ||| |||||||||||||||    
T  1392785 aacaccctatctaatactcactctcttattggtttaaatcattgtggg-ctacattttaaaaattgaacacatacaaagtagtgagacatacattgattt 1392687  T
Q  257 catccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  |  ||||||||||||||||| ||||||||||||||||| |||||    
T  1392686 catccaataaaaaatagagtgctagagagtgttaaaaagtgagtgttactaacattc 1392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 16852005 - 16852106
Alignment:
Q  167 ctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataa 266  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||||||| |||||    
T  16852005 ctaatacccactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagtggtgggacatacatttatttcatctaataa 16852104  T
Q  267 at 268  Q
    ||    
T  16852105 at 16852106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 2676067 - 2675936
Alignment:
Q  143 agaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtggg 242  Q
    |||| ||||||||||||||||||||||||||||| | | ||||||||||||| ||||||||||||||| |||||||| | ||||   ||||| |||||||    
T  2676067 agagtaatgctagcaacactctctctaatactcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtggg 2675968  T
Q  243 acatacattgatttcatccaataaatgagtga 274  Q
    ||||||||||| ||||| ||||||| ||||||    
T  2675967 acatacattgaattcattcaataaaagagtga 2675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 21987450 - 21987292
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||| |||  |||| | || ||| |||||||| ||||||||||||    
T  21987450 aacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggatatacattgattt 21987351  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||||||||  |||||||||  |||||||| ||||  ||||||||    
T  21987350 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgttagcattc 21987292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 32112739 - 32112849
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||||||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||   ||||| |||||||||||| ||||| |||||||||    
T  32112739 aacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtgacatgcattgattt 32112838  T
Q  257 catccaataaa 267  Q
    |||||||||||    
T  32112839 catccaataaa 32112849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 156 - 316
Target Start/End: Original strand, 12753781 - 12753943
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||| || |||||  ||||||  |||||| |||||| ||||||||||| |||  |||    
T  12753781 caacactctctctaatactcgctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtggtgggacatgcatgtatt 12753880  T
Q  256 tcatccaataaatgagtgagtgc--tagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    | ||||||| || |||||| |||  || |||||||| ||||||||||||| ||||||||||||    
T  12753881 ttatccaatgaaagagtgattgctataaagagtgttcaaaagtgagtgttgctagcattcctc 12753943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 17144695 - 17144821
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    |||||||| ||||||| | ||  ||||| |||||||||||||||||||||||||||||||| | ||||  ||||||| ||||| ||||| ||||||||||    
T  17144695 cactctctttaatacttactcctttattagtttaaatcattgtgggtctacactttgaaaatttaacctacacaaaacggtggaacatatattgatttca 17144794  T
Q  259 tccaataaatgagtgagtgctagagag 285  Q
    | |||||||  ||| ||||||||||||    
T  17144795 ttcaataaaatagtaagtgctagagag 17144821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 16187460 - 16187575
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||   ||||||||||||||  |||||||||||| |||||    
T  16187460 ctctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatggtggg--atacattgatttaatcca 16187557  T
Q  263 ataaatgagtgagtgctag 281  Q
    | |||| |||||| |||||    
T  16187558 aaaaat-agtgagggctag 16187575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 16187678 - 16187793
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||   ||||||||||||||  |||||||||||| |||||    
T  16187678 ctctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatggtggg--atacattgatttaatcca 16187775  T
Q  263 ataaatgagtgagtgctag 281  Q
    | |||| |||||| |||||    
T  16187776 aaaaat-agtgagggctag 16187793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 12780781 - 12780879
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    ||||| |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||| ||||||  |||||| | ||| ||||||||||||||    
T  12780781 aacaccctctctaatattcattcccttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtagtgagacatacattgatt 12780879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 8441871 - 8442020
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| ||| ||||||||||| || ||||  ||||||||||||||||| ||||| ||||||||             || ||||||    
T  8441871 aacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaactcccacaaa------------gcaatgattt 8441958  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||||| | ||||||||||||    
T  8441959 catccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcctc 8442020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 8450675 - 8450824
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| ||| ||||||||||| || ||||  ||||||||||||||||| ||||| ||||||||             || ||||||    
T  8450675 aacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaactcccacaaa------------gcaatgattt 8450762  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||||| | ||||||||||||    
T  8450763 catccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcctc 8450824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 19090238 - 19090398
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    |||||||||||  ||||| ||| ||||||||| || ||| ||| || | ||||||||| |||  |||||| || ||| ||||||||||||||||||||||    
T  19090238 cactctctctagcactcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttc 19090337  T
Q  258 atccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    | |||||||| ||||| |||||  |||||||| | ||||| |||||||  |||||||||||    
T  19090338 acccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 19090398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 35128794 - 35128900
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||||||||||||  |||||| || ||| ||||||||||||||||||||| | |||||||| |||||| ||||  |||||||||| ||||| |||||||    
T  35128794 ctacactttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtgactgctagagagagtgttcaaaagagagtgtt 35128893  T
Q  304 actagca 310  Q
     ||||||    
T  35128894 gctagca 35128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 189 - 316
Target Start/End: Complemental strand, 31444085 - 31443956
Alignment:
Q  189 tttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagt 286  Q
    |||||||| ||||| ||| |||||||||||| ||||||  ||||||||||||| ||||| ||| ||||||||||||||| || |||||| |  | |||||    
T  31444085 tttaaatccttgtgagtcaacactttgaaaattgaaccgacacaaaatggtggaacataaattaatttcatccaataaaagaatgagtgttaaaaagagt 31443986  T
Q  287 gttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||| | | |||| ||||| ||||||    
T  31443985 gttgaaaaattattgttgctagccttcctc 31443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 32598970 - 32599086
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||||| ||||||||| ||| |||||| ||||||||||||||  ||||||||||| |||  | |||| |||||| ||| |||||||||||  |||     
T  32598970 aacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaaagtggcgggacatacatgtattc 32599069  T
Q  257 catccaataaatgagtg 273  Q
    ||||||||||| |||||    
T  32599070 catccaataaaagagtg 32599086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 16436222 - 16436121
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| | ||||| ||| ||  ||||||||||||||| || ||||||||||||||  |||  |||||| |||||||||||||| |||||||||||||    
T  16436222 aacactctttttaatattcagtcgattattggtttaaatctttttgggtctacactttagaaatagaacccacacaaaatggtggg-catacattgattt 16436124  T
Q  257 cat 259  Q
    |||    
T  16436123 cat 16436121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 298
Target Start/End: Complemental strand, 2931660 - 2931576
Alignment:
Q  216 aaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtga 298  Q
    |||| |||||| |||||||||||| |||||||||||||||||||| ||||||| || || || |  |||||||||||||||||||    
T  2931660 aaaattgaaccaccacaaaatggtaggacatacattgatttcatcaaataaataagcgaatgatagagagagtgttgaaaagtga 2931576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 6531401 - 6531481
Alignment:
Q  238 gtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||||||||| |||||||| |||||||||||  |||||||  | ||||| ||||||| ||||||||||||    
T  6531401 gtgggacatacattgatttcacccaataaaagagtgagtgctggagagagtcctcaaaagagagtgttgctagcattcctc 6531481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 900026 - 899943
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaata 265  Q
    |||||||||||| |||||||||||||| | | |||||| |||||||||  ||||| |||| |||||  ||||||||||||||||    
T  900026 ttattggtttaattcattgtgggtctatattatgaaaattgaacccccgtaaaatagtggaacatatgttgatttcatccaata 899943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 12327292 - 12327355
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||||| ||||||||||| |||||||||||||||  |||||||||| |||||| ||||||||||    
T  12327292 gaacccacacaaaatggtaggacatacattgattctatccaataaaagagtgactgctagagag 12327355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 313
Target Start/End: Complemental strand, 13001838 - 13001692
Alignment:
Q  169 aatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaat 268  Q
    |||| ||| ||| ||||||||||||||| || | ||| |||| |||| ||| |||| || || |||||| || |||||||||| |||| ||||||| ||     
T  13001838 aatattcactcttttattggtttaaatctttataggtttacattttgcaaattgaatccacataaaatgatgtgacatacatttattttatccaatgaaa 13001739  T
Q  269 gagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
     | ||| || |  |||||||| |||||||||||||||||||||||||    
T  13001738 aaatgaatgttagagagagtgctgaaaagtgagtgttactagcattc 13001692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 4595850 - 4595772
Alignment:
Q  207 tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||||||||||||  ||||||  | ||| ||||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  4595850 tacactttgaaaatggaacccataaaaagtggtgagacatacattgatttcactcaataaaagagtgagtgctagagag 4595772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 10060968 - 10060856
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtga--gtgctagagagtgttgaaaagtgagtgtt 303  Q
    ||||||||||||||  |||||| || ||| ||| |||||||||||||||||||   |||||| ||||||  ||  || |||||||| ||||| |||||||    
T  10060968 ctacactttgaaaatggaacccacataaagtggcgggacatacattgatttcacataataaaagagtgattgttataaagagtgttcaaaagagagtgtt 10060869  T
Q  304 actagcattcctc 316  Q
     ||||||||||||    
T  10060868 gctagcattcctc 10060856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 12784982 - 12785071
Alignment:
Q  178 tctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||   || ||| | ||  |||||||||||||| || ||||||||    
T  12784982 tctcttattggtttaaatcattatggatctacactttgaaaattgaactaacataaagtagtaagacatacattgattccacccaataaa 12785071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 34882235 - 34882298
Alignment:
Q  142 aagaggaatgctagcaacactctctct--aatactcaatctcttattggtttaaatcattgtgg 203  Q
    ||||| ||||||||||||||||||| |  || ||||| ||||||||||||||||||||||||||    
T  34882235 aagagaaatgctagcaacactctcttttcaacactcactctcttattggtttaaatcattgtgg 34882298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 285
Target Start/End: Complemental strand, 373571 - 373429
Alignment:
Q  144 gaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtggg 242  Q
    ||||| || |||||||||||||||||| ||| | | | ||||||| | |||||| ||| || | ||| |||||||||  ||| || || ||| || ||||    
T  373571 gaggagtgttagcaacactctctctaacacttactattttattggataaaatcaatgtaggacctaccctttgaaaatggaatccacataaagtgctggg 373472  T
Q  243 acatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    |||||||||||||| | ||||||||  |||| |||||||||||    
T  373471 acatacattgattttacccaataaaaaagtgggtgctagagag 373429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 317
Target Start/End: Complemental strand, 19090281 - 19090208
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||| |||| |||||||| |||||||||||||  |||||| | ||||| ||||||| |||||||||||||    
T  19090281 tacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctca 19090208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 274
Target Start/End: Original strand, 20128791 - 20128910
Alignment:
Q  152 ctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaa-tggtgggacatacat 250  Q
    |||||| |||||||| || |||||| || ||||||||||||||| |||| |||    || |||||||| | ||||   |||||| || ||||||||||||    
T  20128791 ctagcatcactctctttagtactcactcccttattggtttaaattattggggg----cattttgaaaattaaaccattacaaaaatgatgggacatacat 20128886  T
Q  251 tgatttcatccaataaatgagtga 274  Q
    |||||||| | |||||||||||||    
T  20128887 tgatttcaccaaataaatgagtga 20128910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 22204079 - 22203960
Alignment:
Q  152 ctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaa-tggtgggacatacat 250  Q
    |||||| |||||||| || |||||| || ||||||||||||||| |||| |||    || |||||||| | ||||   |||||| || ||||||||||||    
T  22204079 ctagcatcactctctttagtactcactcccttattggtttaaattattggggg----cattttgaaaattaaaccattacaaaaatgatgggacatacat 22203984  T
Q  251 tgatttcatccaataaatgagtga 274  Q
    |||||||| | |||||||||||||    
T  22203983 tgatttcaccaaataaatgagtga 22203960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 9940427 - 9940388
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  9940427 tacattgatttcacccaataaaagagtgagtgctagagag 9940388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 19737501 - 19737431
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcc 314  Q
    ||||||||||| | |||||||| ||||||||| |||||||  |||| ||||| ||||||| ||||||||||    
T  19737501 tacattgatttgagccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcattcc 19737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 19737456 - 19737585
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    |||| ||||||||  ||||| ||| ||||||| | |||||| ||| || | ||||||||| |||   ||||| || ||| || | ||| |||||||||||    
T  19737456 aacattctctctatcactcactcttttattggctcaaatcaatgtaggacctacactttggaaatgaaacccacataaagtgataggatatacattgatt 19737555  T
Q  256 tcatccaataaatgagtgagtgctagagag 285  Q
    ||| ||||| || |||||||||||||||||    
T  19737556 tcacccaattaaagagtgagtgctagagag 19737585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 148 - 313
Target Start/End: Original strand, 10141989 - 10142154
Alignment:
Q  148 aatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacata 247  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||| |||||||||||||||||  |||||  |||||| ||||||||||||    
T  10141989 aatgctagcaacactctctctaacactcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacata 10142088  T
Q  248 cattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||    
T  10142089 cattgattttatccaataaaagagtgagtgctatagagtgttgaaaaatgagtgttgctagcattc 10142154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 28490744 - 28490905
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||| |||||   |||||| ||||||||||||| |||||||    
T  28490744 aacactctctctaatactcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggtgggacatactttgattt 28490843  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||||  ||||| ||||  ||||||| ||||||||||| |||| ||||||||||||    
T  28490844 catccaataaaaaagtgaatgctagagagagttttgaaaagtgactgttgctagcattcctc 28490905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 163 - 316
Target Start/End: Complemental strand, 37455500 - 37455346
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| |||||||||||||||| | |||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| |    
T  37455500 ctctctaatactcactctcttattggtttaatt-attgtgagtctacactttgaaaattgaacccccacaaaatggtggaacatacattgattttatcga 37455402  T
Q  263 ataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||| |||||||  |||||||| |||| |||||||||| || |||||||    
T  37455401 ataaatgagtgtgtgctagagagagtgttaaaaaatgagtgttacaagtattcctc 37455346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 143 - 317
Target Start/End: Original strand, 17537110 - 17537286
Alignment:
Q  143 agaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtggg 242  Q
    |||| ||||||| ||||| ||||||| ||| ||| |||||||||||||||||||||| ||| ||||||||||||||| | ||||  || ||| |||||||    
T  17537110 agagtaatgctaacaacaatctctcttatattcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtggg 17537209  T
Q  243 acatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||||||||| ||| |||||| ||||||||| |  ||||||||||||||||||||| ||  || |||||||||    
T  17537210 acatacattgatttgatcaaataaaagagtgagtgatagagagagtgttgaaaagtgagtattgttatcattcctca 17537286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 178 - 316
Target Start/End: Complemental strand, 34368497 - 34368357
Alignment:
Q  178 tctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||| ||| ||||||| || |||||||||    
T  34368497 tctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtgagtg 34368398  T
Q  278 ctagag--agtgttgaaaagtgagtgttactagcattcctc 316  Q
     |||||  |||||| |||| | |||||| ||||||||||||    
T  34368397 ttagagaaagtgttcaaaaataagtgttgctagcattcctc 34368357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 5413770 - 5413878
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||||||| | | |||||||||||||||||| ||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  5413770 taatactcacttttttattggtttaaatcattatgggtctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaa 5413869  T
Q  268 tgagtgagt 276  Q
     ||||||||    
T  5413870 agagtgagt 5413878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 313
Target Start/End: Original strand, 30325896 - 30326054
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||| | |  |||| | || ||| ||||| |||||||||||||||    
T  30325896 aacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggagatagaactcgcataaagtggtgagacatacattgattt 30325995  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||  ||||||||||  |||||||||  |||||||| |||| |||||||||    
T  30325996 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcattc 30326054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 173 - 316
Target Start/End: Complemental strand, 39246750 - 39246605
Alignment:
Q  173 ctcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagt 272  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| |||||||||   |||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataagaaagt 39246651  T
Q  273 gagtgctagagag--tgttgaaaagtgagtgttactagcattcctc 316  Q
    || || |||||||  || | |||||||| |||| ||||||||||||    
T  39246650 gattgttagagaggatgctcaaaagtgattgttgctagcattcctc 39246605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 41105594 - 41105707
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||| | ||||||||||| ||||||| |||||| | ||||||||| | |||||||||    
T  41105594 cactctctctaatactcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaacccacacaaagtagtgggacatcccttgatttca 41105693  T
Q  259 tccaataaatgagt 272  Q
    ||||||||| ||||    
T  41105694 tccaataaaagagt 41105707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 25710490 - 25710614
Alignment:
Q  153 tagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattg 252  Q
    |||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||||||||||||  |||| |  || || |||| ||||||||||||    
T  25710490 tagcaacactctctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacatacattg 25710589  T
Q  253 atttcatccaataaatgagtgagtg 277  Q
    ||||||  ||||||| |||||||||    
T  25710590 atttcacacaataaaagagtgagtg 25710614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 163 - 318
Target Start/End: Original strand, 28223804 - 28223961
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||| ||| ||| |||||||| |  | ||||||| | ||||||| ||    
T  28223804 ctctctaatactcactcttttattggtttaaatcattatgggtctatactttgaaaattgagcccacacaaaattggtgaacatacaataatttcattca 28223903  T
Q  263 ataaatgagtgagtgctagag--agtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    ||||| || | |||| || ||  |||||||||||||||||||| |||||||| |||||    
T  28223904 ataaaagaataagtgttaaaggtagtgttgaaaagtgagtgttgctagcatttctcaa 28223961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 313
Target Start/End: Original strand, 28090242 - 28090407
Alignment:
Q  148 aatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacata 247  Q
    ||||||| ||||||||| | ||||| ||| ||| |||||||||||||||||||| | |||| |||||||||| ||||| | |||||| |||||||||||     
T  28090242 aatgctaacaacactctatgtaatattcactcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatg 28090341  T
Q  248 cattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattc 313  Q
     |||||||||||  |||| |  ||| |||| |||||||||||||||| | |||||| ||| |||||    
T  28090342 aattgatttcatataatataatagtaagtgatagagagtgttgaaaaataagtgttgctaacattc 28090407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 34384713 - 34384833
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| ||||||||| ||| |||| ||| |||||||||||| ||||| | |||||||| ||||| | |||||||| |||||||||||||||||||    
T  34384713 aacactctctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggacatacattgattt 34384812  T
Q  257 catccaataaatgagtgagtg 277  Q
    || |||||||| || ||||||    
T  34384813 cacccaataaaagaatgagtg 34384833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 41330415 - 41330531
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||| |||||||  || ||||||||||||||||||||||| |||||||||||||||| ||||||  |||||| || ||||||||||||| ||||    
T  41330415 aacacactctttaatactacatttcttattggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaagtgatgggacatacattaattt 41330514  T
Q  257 catccaataaatgagtg 273  Q
    |||| |||||| |||||    
T  41330515 catctaataaaagagtg 41330531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 28434846 - 28434966
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||  || ||| | |||||||||||| |||||||| |||||    
T  28434846 ctctctaatactcattttcttattggtttaaatcattgtgggtctaaactttgaaaattgaa--ccaacacagtggtgggacatatattgattttatcca 28434943  T
Q  263 ataaatgagtgagtgctagagag 285  Q
    ||||| || | |||| |||||||    
T  28434944 ataaaagaattagtgttagagag 28434966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 156 - 316
Target Start/End: Complemental strand, 43405552 - 43405390
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    |||||||| |||| ||| ||| |||||||||| ||||||||||||||||||||||||||| |||  ||||    ||||| ||||| ||||||||||||||    
T  43405552 caacactccctctgatattcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgatt 43405453  T
Q  256 tcatccaataaatgagtgagtg--ctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| ||||||| |||||||||    |||| ||||| |||| ||||| ||| |||||||||||    
T  43405452 tcattcaataaaagagtgagtgacaaagagcgtgttaaaaattgagtattattagcattcctc 43405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 178 - 313
Target Start/End: Original strand, 27592495 - 27592632
Alignment:
Q  178 tctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    |||||||||||||||||||||||  | ||||||||||| |||  |||| | || ||| ||||| ||||||||||||||||||||||||||  ||||||||    
T  27592495 tctcttattggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtgagtg 27592594  T
Q  278 ct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||  |||||||||  ||||| |||||||||||| ||||    
T  27592595 ctaaagagagtgtgcaaaagcgagtgttactagaattc 27592632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 31885878 - 31885964
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaat 268  Q
    |||||||||||||||||||| | ||||||||||||||| |||||| ||| ||||||||||||||| ||||| |||||||||||||||    
T  31885878 ttattggtttaaatcattgtagatctacactttgaaaattgaacctccagaaaatggtgggacatccattgttttcatccaataaat 31885964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 10950238 - 10950124
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||| ||| ||||||||| |||||||||||| || ||||| ||||||||||  ||| ||  |||||||||||||||||||||||||||||| ||    
T  10950238 ctctctaatattcattctcttattagtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacatacattgatttcattca 10950139  T
Q  263 ataaatgagtgagtg 277  Q
    || || |||| ||||    
T  10950138 atgaaagagtaagtg 10950124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 25919344 - 25919266
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatc 260  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||| |||||| ||||||||||||    
T  25919344 ttattggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtgagacatatattgatttcatc 25919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 36337937 - 36338064
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag 281  Q
    |||||||||||||||||||||||||||||||||| ||| |||||   ||||||||  ||||||||||||| |||||||| ||||||  | |||||||||     
T  36337937 ttattggtttaaatcattgtgggtctacactttggaaattgaacatacacaaaattatgggacatacattaatttcatcaaataaaataatgagtgctaa 36338036  T
Q  282 a--gagtgttgaaaagtgagtgttactag 308  Q
    |  |||||||| ||||| |||||||||||    
T  36338037 aatgagtgttg-aaagtaagtgttactag 36338064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 13456236 - 13456347
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttac 305  Q
    ||||||||||||||  |||||| || |||||||||||| ||||||||||||||||| ||||| ||||||||  ||||||||| | |||||  |||| | |    
T  13456236 ctacactttgaaaatggaacccacataaaatggtgggaaatacattgatttcatccgataaaagagtgagtaatagagagtgctcaaaagaaagtgctgc 13456335  T
Q  306 tagcattcctca 317  Q
    ||||||||||||    
T  13456336 tagcattcctca 13456347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 42224662 - 42224776
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  |||||| || ||| ||||||||||||||||||||||| | |||||| |||||||||||  |||||||| | ||||| |||||||    
T  42224662 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacctaataaaagagtgagtgctagagagagtgctcaaaagagagtgtt 42224761  T
Q  304 actagcattcctcaa 318  Q
     ||||||||||||||    
T  42224762 gctagcattcctcaa 42224776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 14553665 - 14553573
Alignment:
Q  162 tctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgat 254  Q
    ||||||||||||||| |||||| ||||||||| | |||||||||||||||||| |||| ||||||  |  |||||||| ||||||||||||||    
T  14553665 tctctctaatactcactctcttgttggtttaatttattgtgggtctacactttaaaaattgaaccaacgtaaaatggtaggacatacattgat 14553573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 316
Target Start/End: Original strand, 28155746 - 28155881
Alignment:
Q  179 ctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgc 278  Q
    ||||||||||| |||| |||||||  ||||||||||||||| | |||||  | |||||||| | ||||||||||||||||| ||||||| |||| |||||    
T  28155746 ctcttattggtataaaacattgtg--tctacactttgaaaattaaacccataaaaaatggttgaacatacattgatttcattcaataaaagagtaagtgc 28155843  T
Q  279 tagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| ||| || ||||  |||||||  |||| ||||||    
T  28155844 tagaaagtattaaaaaaagagtgttgttagccttcctc 28155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 331 - 617
Target Start/End: Complemental strand, 26133160 - 26132868
Alignment:
Q  331 ccataaacgtcacatttaacaaaaagatggtcaatgtcctcattctcaccatagtttg--------ccttgctcagtagctgtaataatgctcatatgcg 422  Q
    |||||||  |||||||||||||||||||||||||| ||||||||| ||||| | || |        ||||||||| |||||| ||| |  ||| |||||     
T  26133160 ccataaaaatcacatttaacaaaaagatggtcaatatcctcattcacaccacaattcgtcgtgcacccttgctcactagctgaaatgactctcgtatgca 26133061  T
Q  423 ataaattatcctttgtcggcactctattccgcaaaagcctccaagcaaaaataaacatctatagaggaataacctttagagagacaaattggtgagaatt 522  Q
    ||||| ||||| |||||   ||| ||| | ||| ||||||||||| ||||||| | | || || ||||| ||||||||   |||||||||| |||| |||    
T  26133060 ataaagtatcccttgtcaagactatatgc-gcagaagcctccaagaaaaaatagagacctttaaaggaacaacctttaaccagacaaattgatgaggatt 26132962  T
Q  523 ttggtgctgattgatgtcaacttctgtcaattttttgtaagcactacttacagtataacaattagatgaatgcaaatgccaaatccaatgatcag 617  Q
    |||||  |||||||| || || |||||||| || ||||||||  | || || | ||||||||  || ||||||||||| |||||||| |||||||    
T  26132961 ttggttttgattgatatctacatctgtcaaattgttgtaagcgttgctaactgaataacaatgtgaagaatgcaaatg-caaatccactgatcag 26132868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 34479982 - 34480079
Alignment:
Q  166 tctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||| |||||||||| | ||||||| ||||||||||| |||||| |||| ||||  | |||||||||||| || ||| |||||||||||||||    
T  34479982 tctaatacttaatctcttatcgatttaaattattgtgggtctgcactttaaaaattgaattcacacaaaatggtgagatatatattgatttcatccaa 34480079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 184 - 317
Target Start/End: Complemental strand, 25630938 - 25630803
Alignment:
Q  184 attggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--ag 281  Q
    ||||||||||||||| |||||||||||||||||||| ||||||   ||||||| |||||| ||||||| |||| ||  ||||||  ||| | || |  ||    
T  25630938 attggtttaaatcatcgtgggtctacactttgaaaattgaacctatacaaaatagtgggatatacattaattttattaaataaaatagtaaatgttaaag 25630839  T
Q  282 agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||||||| ||| || |||||||| ||||    
T  25630838 agagtgttgaaaagtaagtattgctagcatttctca 25630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 24915169 - 24915239
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||| |||||||| ||||||||||||||||||| | ||||| ||||||| |||| |||||||    
T  24915169 tacattgatttcacccaataaaagagtgagtgctagagagtgcttaaaagagagtgttgctagtattcctc 24915239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 24991000 - 24991070
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||| |||||||| ||||||||||||||||||| | ||||| ||||||| |||| |||||||    
T  24991000 tacattgatttcacccaataaaagagtgagtgctagagagtgcttaaaagagagtgttgctagtattcctc 24991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 28611802 - 28611961
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    |||||||||||| ||  | ||| |||||| |||||||||||||| ||||||||||| ||||  |||| |  ||||| || ||||||||||| || ||  |    
T  28611802 cactctctctaacaccaactcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactcatacaaagtgatgggacatacactggttata 28611901  T
Q  259 tccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| || |||||| || |  |||||||| | |||||||||||||  |||||||||||    
T  28611902 tccaatgaaagagtgaatgttagagagagtgctcaaaagtgagtgttgttagcattcctc 28611961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 40971554 - 40971637
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||||||||||||||||||  ||||||| |||||||||||  |||||||| | ||||| |||||||  ||||||||||||    
T  40971554 tggtgggacatacattgatttcactcaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgttagcattcctca 40971637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 1923581 - 1923668
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacatt 251  Q
    ||||||||||||| | ||||||||||||||||||||||    ||||||||| |||| ||||| | |||||| ||||| ||||||||||    
T  1923581 tctctaatactcattatcttattggtttaaatcattgtaaaactacactttaaaaattgaactcacacaaagtggtgtgacatacatt 1923668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 32309559 - 32309477
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcctc 316  Q
    |||| ||||||||||| |||| |||||||||  |||||||||||||||||  |||||||||| ||||||  ||||||||||||    
T  32309559 tggtcggacatacattaattttatccaataagagagtgagtgctagagagaatgttgaaaagagagtgtctctagcattcctc 32309477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 4959391 - 4959468
Alignment:
Q  245 atacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaaca 320  Q
    |||||||||||||  |||||||| |||||||||||  |||||||| | ||||| |||||||||||||| |||||||||    
T  4959391 atacattgatttcccccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttactagcactcctcaaca 4959468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 4714882 - 4714797
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    |||||||| ||||||||||||  |||||| ||||||||  |||||| ||||||||| ||||||| ||| | |||| ||||||||||    
T  4714882 ttattggtataaatcattgtgtatctacattttgaaaatagaacccacacaaaatgatgggacacacaataatttaatccaataaa 4714797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 4959387 - 4959275
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||||||||||||   ||||| || |||||| || ||||||||||||||||| |||||||| ||||| ||  |  |||||||| | ||||| |||||||    
T  4959387 ctacactttgaaaatgtaacccacataaaatgatgagacatacattgatttcacccaataaaagagtgggtattagagagagtgctcaaaagagagtgtt 4959288  T
Q  304 actagcattcctc 316  Q
     ||||||||||||    
T  4959287 gctagcattcctc 4959275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 2525721 - 2525622
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||| ||| |||||||||  ||||||||||| ||  | |||||||||||||| |||  | |||||| |||||  | |||||||||||||||||||||||    
T  2525721 taatattcactctcttattaatttaaatcattatgtatttacactttgaaaacagaaatcacacaaagtggtgatagatacattgatttcatccaataaa 2525622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 6263971 - 6263881
Alignment:
Q  227 cccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcct 315  Q
    |||| ||| |||||||||||| |||||||| | |||||||| ||||||||| |  |||||||| | ||||| ||||||||||| |||||||    
T  6263971 cccataaagtggtgggacatatattgattttacccaataaaggagtgagtgatagagagagtgctcaaaagagagtgttactaacattcct 6263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 10253183 - 10253242
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaag 295  Q
    |||||||||||||||| ||||||||||||| | ||||||||| |||||||| || |||||    
T  10253183 tggtgggacatacattaatttcatccaatagaagagtgagtgttagagagtattcaaaag 10253242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 229 - 316
Target Start/End: Complemental strand, 17700255 - 17700168
Alignment:
Q  229 cacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| |||||||  |||||||| || ||||||||||| ||||||| | || ||||| || ||||||||||||| |||| |||||||    
T  17700255 cacaaagtggtggggtatacattggttccatccaataaaagagtgaggggtatagagtattcaaaagtgagtgttgctagtattcctc 17700168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 32050413 - 32050490
Alignment:
Q  238 gtgggacatacattgatttcatccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattc 313  Q
    |||| |||||||||||||||| ||||||||  ||||||||||||||||  || | ||||| ||||||| |||||||||    
T  32050413 gtggaacatacattgatttcacccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcattc 32050490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 162 - 303
Target Start/End: Original strand, 17434876 - 17435017
Alignment:
Q  162 tctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcc 261  Q
    ||||||||||  ||| ||| |||||||||||||||| ||||||||||||||||  |||  |||| |  ||||||| || | ||||| |||  ||| ||||    
T  17434876 tctctctaatgttcactcttttattggtttaaatcaatgtgggtctacactttagaaatagaactcatacaaaatagtagaacatatatttgtttaatcc 17434975  T
Q  262 aataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    ||||||  |||||||  |  ||||||||||||||||| ||||||    
T  17434976 aataaa--agtgagtaataaagagagtgttgaaaagtaagtgtt 17435017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 17568768 - 17568696
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgcta--gagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| ||||||||||||||| ||||| ||||||  ||||||| | ||||| ||||||| ||||||||||||    
T  17568768 tacattaatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctc 17568696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 279
Target Start/End: Complemental strand, 24915208 - 24915091
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcc 261  Q
    |||||||  ||||| ||| ||||||| | |||||| ||| || | |||||||||||||  |||||| || ||| |||||||||||| |||||||||| |     
T  24915208 ctctctagcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacccacataaagtggtgggacatatattgatttcacct 24915109  T
Q  262 aataaatgagtgagtgct 279  Q
    |||||| ||| |||||||    
T  24915108 aataaaagagcgagtgct 24915091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 26072218 - 26072290
Alignment:
Q  247 acattgatttcatccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||| ||||| |||||||| |||||||||||||||||  || | ||||| ||||||| |||||||||||||    
T  26072218 acattgttttcacccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcattcctca 26072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 42224657 - 42224585
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||| |||||||| |||||||||||  |||||||  | ||||| ||||||| ||||||||||||    
T  42224657 tacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcattcctc 42224585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 38607164 - 38607212
Alignment:
Q  148 aatgctagcaacactctctctaatactcaatctcttattggtttaaatc 196  Q
    ||||||||||||||||||| ||||||| | ||||||||| |||||||||    
T  38607164 aatgctagcaacactctctttaatacttactctcttatttgtttaaatc 38607212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 5465674 - 5465725
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtcta 208  Q
    |||||| | ||||||| ||| |||||||||||||||||||||| ||||||||    
T  5465674 aacactttttctaatattcactctcttattggtttaaatcattatgggtcta 5465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 24991039 - 24990924
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcc 261  Q
    |||||||  ||||| ||| ||||||| | |||||| ||| || | |||||||||||||  |||||  || ||| |||||||||||| |||||||||| ||    
T  24991039 ctctctagcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacctacataaagtggtgggacatatattgatttcaccc 24990940  T
Q  262 aataaatgagtgagtg 277  Q
    |||||| ||| |||||    
T  24990939 aataaaagagcgagtg 24990924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 25564033 - 25564088
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    |||||| |||||| |||||| ||||||||| ||||||||||||||| | |||||||    
T  25564033 gaacccacacaaagtggtggaacatacatttatttcatccaataaaagggtgagtg 25564088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 6263995 - 6264068
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||||| ||| |||| |||||||||||||  |||||| | ||||| ||||||| |||||| ||||||    
T  6263995 tacattgatttcacccactaaaagagtgagtgctagatagagtgcttaaaagagagtgttgctagcactcctca 6264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 10666713 - 10666819
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcat 259  Q
    ||||||| ||| | ||| |||||||||||||||||| | |||| ||||||| ||| ||||  |||||| || ||| |||| ||| ||||| |||||| ||    
T  10666713 actctctttaacattcactctcttattggtttaaattaatgtgagtctacaatttaaaaatggaacccacataaagtggtaggatatacaatgattttat 10666812  T
Q  260 ccaataa 266  Q
    | |||||    
T  10666813 ctaataa 10666819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 13456236 - 13456174
Alignment:
Q  241 ggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgtt 303  Q
    |||| ||||||||||||| | |||||| ||||||||||||||||||  | ||||| |||||||    
T  13456236 ggacctacattgatttcacctaataaaagagtgagtgctagagagtactcaaaagagagtgtt 13456174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 28434986 - 28434932
Alignment:
Q  143 agaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatca 197  Q
    |||||||||||||||||||||||||||| ||| | ||| ||||||| | ||||||    
T  28434986 agaggaatgctagcaacactctctctaacactaattcttttattggataaaatca 28434932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 4427375 - 4427338
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaa 219  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  4427375 ttatttgtttaaatcattgtgagtctacactttgaaaa 4427338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 17568803 - 17568848
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctag 281  Q
    |||||||||||| ||||||||||  ||||||| |||||||||||||    
T  17568803 tggtgggacataaattgatttcactcaataaaagagtgagtgctag 17568848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 25002026 - 25002086
Alignment:
Q  156 caacactctctctaatactcaatctcttattggtttaaatcattgtgggtct-acactttg 215  Q
    |||||||||||| || ||||| | ||| ||||||||||||||| |||||||| ||||||||    
T  25002026 caacactctctccaacactcactttctaattggtttaaatcatagtgggtctcacactttg 25002086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 41511808 - 41511772
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcatt 199  Q
    |||||||||||| |||||||||||| |||||||||||    
T  41511808 ctctctaatacttaatctcttattgatttaaatcatt 41511772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 26767783 - 26767945
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||| ||||||| |||||||| ||||||| |||||| |||||||||||||||||||||    
T  26767783 aacactctatctaatactcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcacaaagtggtgggacatacattgattt 26767882  T
Q  257 catccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||| |||| |||| ||||||||||||  |||||||||||||||||| |||||||||||||    
T  26767883 catccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttgctagcattcctca 26767945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 12989349 - 12989187
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||  ||| ||  ||||| |||||||||||||||||||||    
T  12989349 aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaagtggtgggacatacattgattt 12989250  T
Q  257 catccaataaatgagtgagt--gctagagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||| || ||||||||  |  |||||||||||||||||||||||| |||||||||||||    
T  12989249 catccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgttgctagcattcctca 12989187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 9470233 - 9470082
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||    
T  9470233 ctctctaatattcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatcca 9470134  T
Q  263 ataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    ||||| ||||||||| |  |||||| |||||||| ||||| || ||||||||    
T  9470133 ataaaagagtgagtgttagagagagcgttgaaaaatgagtattgctagcatt 9470082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 157 - 312
Target Start/End: Original strand, 6980142 - 6980299
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||| ||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||||| ||||| | |||||| |||| | |||||| |||||||    
T  6980142 aacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactcacacaaagtggtagaacataccttgattt 6980241  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    ||||||||||| |||||||||||  ||||||||||||||||||| |||| ||||||||    
T  6980242 catccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 6980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 45554717 - 45554567
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||        |||| |||||||||||||||||||||    
T  45554717 aacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattg--------caaagtggtgggacatacattgattt 45554626  T
Q  257 catccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattc 313  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||    
T  45554625 catccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 18511255 - 18511393
Alignment:
Q  181 cttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcta 280  Q
    |||||||||||||| |||||| ||||| ||||||||||| ||||||| || ||||| ||||||||||||||||||| |||||||||| ||||||||| ||    
T  18511255 cttattggtttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgata 18511354  T
Q  281 --gagagtgttgaaaagtgagtgttactagcattcctca 317  Q
      ||||||||| ||||||||||||| |||||||||||||    
T  18511355 gtgagagtgttaaaaagtgagtgttgctagcattcctca 18511393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 157 - 315
Target Start/End: Complemental strand, 38464321 - 38464161
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| || || |||||||||||||||    
T  38464321 aacactctctctaatacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtgatgagacatacattgattt 38464222  T
Q  257 catccaataaatgagtga--gtgctagagagtgttgaaaagtgagtgttactagcattcct 315  Q
    ||| |||||||  ||| |  ||   ||||||||||||||||||| ||||  ||||||||||    
T  38464221 catacaataaaaaagtaattgtcagagagagtgttgaaaagtgaatgttcttagcattcct 38464161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 158 - 318
Target Start/End: Complemental strand, 11539583 - 11539418
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatc-attgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatac--attgat 254  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||||||  |||| | |||||| || ||| ||||||  ||||||    
T  11539583 acactctctctaatactcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacatacatattgat 11539484  T
Q  255 ttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    ||||||||||||| |||||||||||||  |||||||| |||| ||||||||  |||||||||||||    
T  11539483 ttcatccaataaaagagtgagtgctagaaagagtgttcaaaaatgagtgttgttagcattcctcaa 11539418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 316
Target Start/End: Original strand, 36471863 - 36472021
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcat 259  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| || |||| |||||||| |||| ||  | ||| ||||| ||||||| ||||||||||    
T  36471863 actctctctaatactcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaaaagtggtgagacatactttgatttcat 36471962  T
Q  260 ccaataaatgagtgagtg--ctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||  || ||||||    |||||||||||||||||||||||||||| ||||||||    
T  36471963 ccaataagagattgagtgtcagagagagtgttgaaaagtgagtgttactatcattcctc 36472021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 44274387 - 44274264
Alignment:
Q  162 tctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcc 261  Q
    ||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||  ||||||| |||||| ||||||||||||||||||||| ||||    
T  44274387 tctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgggacatacattgattttatcc 44274288  T
Q  262 aataaatgagtgagtgctagagag 285  Q
    ||| || |||||| || |||||||    
T  44274287 aatgaaagagtgaatgttagagag 44274264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 157 - 300
Target Start/End: Complemental strand, 10981676 - 10981531
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| |||  |||||| |||||| ||||||||||||||||  |||    
T  10981676 aacactccctctaatactcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacattttttt 10981577  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagt 300  Q
    ||| ||||| |  |||||||| |  |||||||||| ||||||||||    
T  10981576 cattcaatagaaaagtgagtgttagagagagtgttcaaaagtgagt 10981531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 16719478 - 16719609
Alignment:
Q  183 tattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct--a 280  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||  ||  ||||||||||| |||||||||||||||| |||||| ||||  |||||  |    
T  16719478 tattggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacattgatttcatctaataaaagagtatgtgctaaa 16719577  T
Q  281 gagagtgttgaaaagtgagtgttactagcatt 312  Q
    || |||||||||||||||||||| ||||||||    
T  16719578 gacagtgttgaaaagtgagtgttgctagcatt 16719609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 17188211 - 17188064
Alignment:
Q  169 aatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaat 268  Q
    |||||||| | | |||||||||||||||||| |||| |||||||||||||| |||   | |||||| ||||| || | |||||||||||||||||||||     
T  17188211 aatactcattattttattggtttaaatcattctgggcctacactttgaaaattgagttcacacaaagtggtgagatacacattgatttcatccaataaaa 17188112  T
Q  269 gagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
     |||||||| ||||||| |||||||||||||||||  || ||||||||    
T  17188111 tagtgagtgatagagagagttgaaaagtgagtgttggtaacattcctc 17188064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 157 - 317
Target Start/End: Original strand, 32856157 - 32856323
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| || |||||||||||||||||||||||||||||||| | ||| ||||||||||||||| | ||||| |||||| |||||  ||||| ||| ||||    
T  32856157 aacaccctttctaatactcaatctcttattggtttaaatcactatggatctacactttgaaaattcaacccacacaaagtggtgaaacatatattaattt 32856256  T
Q  257 catccaataaatgagtgagtgc------tagagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||| ||||| |||| |||||       |||||||||| |||||||||||||  ||||||||||||    
T  32856257 catccgataaaagagtcagtgcgtactggagagagtgttcaaaagtgagtgttgttagcattcctca 32856323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 35316436 - 35316583
Alignment:
Q  170 atactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatg 269  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||| |||| |||| |  || |||||||||||||||||||| |||| ||| |||||| |    
T  35316436 atactcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaacataaaatggtgggacatacattaattttatctaataaaag 35316535  T
Q  270 agtgagtgctagagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||  |||||| ||||||||| | ||||||  ||||||| ||||    
T  35316536 agtgagtaatagagaatgttgaaaaataagtgttcatagcatttctca 35316583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 158 - 303
Target Start/End: Original strand, 30718350 - 30718496
Alignment:
Q  158 acactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttc 257  Q
    ||||||||||||||| ||| | | ||||||||||||||||||||| ||||||||||||||||   || || ||||||||| | ||||||| || ||||||    
T  30718350 acactctctctaatattcacttttttattggtttaaatcattgtgagtctacactttgaaaatacaatccacacaaaatgat-ggacatatatcgatttc 30718448  T
Q  258 atccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgtt 303  Q
    |||||||||| |||||||| ||||||||  |||| |||| ||||||||    
T  30718449 atccaataaaagagtgagtactagagagaatgtttaaaattgagtgtt 30718496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 2476664 - 2476533
Alignment:
Q  185 ttggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagaga 284  Q
    |||| |||||||||| |  ||||||| |||||||| ||||    |||||| | ||||||||||||||||||| ||| |||||| |||| |||||||||||    
T  2476664 ttggattaaatcattataagtctacattttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaagagtaagtgctagaga 2476565  T
Q  285 gtgttgaaaagtgagtgttactagcattcctc 316  Q
     ||||||||||||||||||| |||||||||||    
T  2476564 atgttgaaaagtgagtgttagtagcattcctc 2476533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 312
Target Start/End: Complemental strand, 3804750 - 3804585
Alignment:
Q  150 tgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtggg-acatac 248  Q
    ||||||||||||||| | ||||||| | | | |||||  ||||||| ||||||||| ||||||||||||| | ||||  || ||| || |||| ||||||    
T  3804750 tgctagcaacactctttataatacttactattttattaatttaaattattgtgggtgtacactttgaaaattaaacctacataaagtgatggggacatac 3804651  T
Q  249 attgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcatt 312  Q
    ||||||||||||||||||| |||||| || |  |||||||||||||||||||||||  ||||||||    
T  3804650 attgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgtagctagcatt 3804585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 163 - 318
Target Start/End: Complemental strand, 19639245 - 19639088
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||| ||||| ||| |||||||||||||||||||||||| ||||| ||||||||||| ||||| | ||| |  || || ||||||||||||||||||| |    
T  19639245 ctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatcta 19639146  T
Q  263 ataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||||  ||||| ||||  |||||||||| ||||||||| | |  |||||||||||||    
T  19639145 ataaaatagtgaatgctggagagagtgttaaaaagtgagcgctgttagcattcctcaa 19639088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 163 - 318
Target Start/End: Complemental strand, 19837838 - 19837681
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||| ||||| ||| |||||||||||||||||||||||| ||||| ||||||||||| ||||| | ||| |  || || ||||||||||||||||||| |    
T  19837838 ctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatcta 19837739  T
Q  263 ataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||||  ||||| ||||  |||||||||| ||||||||| | |  |||||||||||||    
T  19837738 ataaaatagtgaatgctggagagagtgttaaaaagtgagcgctgttagcattcctcaa 19837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 164 - 277
Target Start/End: Complemental strand, 15884580 - 15884471
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||| |||||||| ||||||| |||||| |||||||    ||||||||||| |||||    
T  15884580 tctctaatactcattatcttattggtttaaataattgtgggtctacattttgaaaattgaacccacacaaagtggtggg----acattgatttcgtccaa 15884485  T
Q  264 taaatgagtgagtg 277  Q
    |||| |||| ||||    
T  15884484 taaaagagtaagtg 15884471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 144 - 320
Target Start/End: Original strand, 31395453 - 31395632
Alignment:
Q  144 gaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtggg 242  Q
    ||||| ||||||||||||||||||||  ||||||||| ||||||| | |||| | ||| || | |||||| || |||  ||| || || ||| ||| |||    
T  31395453 gaggagtgctagcaacactctctctagcactcaatcttttattgggtgaaataaatgtaggacctacactatggaaatggaatccacataaagtggaggg 31395552  T
Q  243 acatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaaca 320  Q
    |||||||||||||||| |||||||| |||||||||||  |||||||| | ||||| ||||||| ||| ||||||||||||    
T  31395553 acatacattgatttcacccaataaaggagtgagtgctaaagagagtgctcaaaagagagtgttgctaacattcctcaaca 31395632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 168 - 313
Target Start/End: Original strand, 34142172 - 34142319
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||| ||| ||||||||||||||||| |||||||  ||||||||||||||| ||||||| |||||| | ||| |||||||||  |||||||||||||||    
T  34142172 taatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtagtgagacatacatgaatttcatccaataaa 34142271  T
Q  268 tgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
      ||||| || |  ||||| ||||||||||| |||||| ||| |||||    
T  34142272 aaagtgaatgtttgagagattgttgaaaagtaagtgttgctaacattc 34142319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 15509024 - 15508908
Alignment:
Q  205 tctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgt 302  Q
    ||||||||||| |||  |||||| || |||||||||||||||||||||||||||  ||||||| ||||||||| |||  |||||||| ||||| ||||||    
T  15509024 tctacactttggaaatggaacccacaaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaagagagtgt 15508925  T
Q  303 tactagcattcctcaac 319  Q
    | ||| |||||||||||    
T  15508924 tgctaacattcctcaac 15508908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 7919280 - 7919382
Alignment:
Q  147 gaatgctagcaacactctctct--aatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggac 244  Q
    |||||||||||||||||||| |  |  ||| | |||||||||||||||||||||||||| ||||||||||||||| |||| || |||||| |||||||||    
T  7919280 gaatgctagcaacactctcttttgagcacttactctcttattggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggac 7919379  T
Q  245 ata 247  Q
    |||    
T  7919380 ata 7919382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 160 - 318
Target Start/End: Original strand, 24895291 - 24895450
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttca 258  Q
    ||||||||||| ||||| ||| | ||||| |||||||| |||||||| ||||||||| |||  |||| | || |||||||||| | |||||||||||| |    
T  24895291 actctctctaacactcactctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggtggaatatacattgatttta 24895390  T
Q  259 tccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||| |||| ||||||||  |||||| |||  ||||| ||||||| |||||||| |||||    
T  24895391 tccattaaaagagtgagtattagagactgtccaaaagagagtgttgctagcatttctcaa 24895450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 42182998 - 42182889
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgtt 303  Q
    |||||||||| |||  |||||| || ||| ||||||||||||||||||||||| |||||||| |||||||||||||  |||||| | ||||| |||||||    
T  42182998 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgtt 42182899  T
Q  304 actagcattc 313  Q
     |||||||||    
T  42182898 gctagcattc 42182889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 172 - 317
Target Start/End: Original strand, 28898073 - 28898221
Alignment:
Q  172 actcaatctcttattggtttaaatcattgtggg-tctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatga 270  Q
    ||||| ||| ||||||| | |||||| ||| || ||||||||||| |||   ||||| || ||| ||||||||||||||||||||||| |||||||| ||    
T  28898073 actcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacataaagtggtgggacatacattgatttcacccaataaaaga 28898172  T
Q  271 gtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||||  |||||||| | ||||  ||||||| |||||||||||||    
T  28898173 gtgagtgctagagagagtgctcaaaaaagagtgttgctagcattcctca 28898221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 164 - 267
Target Start/End: Original strand, 27494480 - 27494583
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaa 263  Q
    ||||||||||||| ||| |||||| |||||||||||| |||||||  ||||||||| ||||||   | ||| |||||| ||| |||||||||||||||||    
T  27494480 tctctaatactcactcttttattgatttaaatcattgcgggtctatgctttgaaaagtgaacctatataaattggtggaacaaacattgatttcatccaa 27494579  T
Q  264 taaa 267  Q
    ||||    
T  27494580 taaa 27494583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 163 - 316
Target Start/End: Original strand, 12098894 - 12099050
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcatt-gtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcc 261  Q
    |||| ||||||||| ||||||||| |||||||||||| ||| || ||||||||||||| ||||| |  ||||| ||| | ||||||| |||||||||||     
T  12098894 ctctttaatactcactctcttattagtttaaatcatttgtgagtttacactttgaaaattgaactcatacaaagtggcgagacatactttgatttcatca 12098993  T
Q  262 aataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||  || || ||||  |||||  ||||||||| ||||||| ||| ||||||||    
T  12098994 aataaaatagcgaatgctaaagagaaagttgaaaagagagtgttgctaacattcctc 12099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 163 - 317
Target Start/End: Complemental strand, 24497344 - 24497188
Alignment:
Q  163 ctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatcca 262  Q
    |||||||||||||| |||| |||| |||||||||| | | |||||||||||||||||   || || ||||||||| ||| |||||||||  |||||||||    
T  24497344 ctctctaatactcactctcctattagtttaaatcactcttggtctacactttgaaaataaaatccacacaaaatgatggaacatacattagtttcatcca 24497245  T
Q  263 ataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||  || || || |  |||||||| | |||||||||||||  |||| |||||||    
T  24497244 ataaaaaagcgactgttaaagagagtggtcaaaagtgagtgttgttagccttcctca 24497188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 238 - 310
Target Start/End: Complemental strand, 31494283 - 31494211
Alignment:
Q  238 gtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagca 310  Q
    ||||||||||||||  |||||||||||||  ||||||||| ||||||||||||||||| ||||||| ||||||    
T  31494283 gtgggacatacattattttcatccaataagagagtgagtgttagagagtgttgaaaagagagtgttgctagca 31494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 209 - 317
Target Start/End: Complemental strand, 37228605 - 37228494
Alignment:
Q  209 cactttgaaaactgaacccccacaaaatggtgggacatacattga-tttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttac 305  Q
    |||||||||||| |||||| || ||| |||||||||||||||| | ||||| |||||||| |||||||||||  |||||||| | ||||| ||||||| |    
T  37228605 cactttgaaaacggaacccacataaagtggtgggacatacattaattttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgc 37228506  T
Q  306 tagcattcctca 317  Q
    ||||||| ||||    
T  37228505 tagcatttctca 37228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 4964744 - 4964858
Alignment:
Q  206 ctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagagtgt--tgaaaagtgagtgtt 303  Q
    ||||||||||||||   || || || ||| ||||||||||||||||||||||| ||||||||  |||||||||||||||| ||  | ||||| || ||||    
T  4964744 ctacactttgaaaatgaaatccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagagagtactcaaaagagaatgtt 4964843  T
Q  304 actagcattcctcaa 318  Q
     ||||||||||||||    
T  4964844 gctagcattcctcaa 4964858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 19427359 - 19427425
Alignment:
Q  247 acattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattc 313  Q
    |||||||||||||||||| |  ||||||||||||||||||||| ||||| ||||||| |||||||||    
T  19427359 acattgatttcatccaatgatagagtgagtgctagagagtgttaaaaagagagtgttgctagcattc 19427425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 157 - 308
Target Start/End: Original strand, 37652267 - 37652420
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||| ||||||| ||| ||| | | |||||||||||||||||||||  ||||||| ||| ||| |||||   ||||||  ||||| ||||||||||||||    
T  37652267 aacattctctcttatattcacttttttattggtttaaatcattgtgaatctacacgttggaaattgaacatacacaaaggggtggaacatacattgattt 37652366  T
Q  257 catccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactag 308  Q
    |||| ||||||  ||| ||||||  | | |||||||||| ||||||||| ||||    
T  37652367 catctaataaaaaagtaagtgctaaaaaaagtgttgaaatgtgagtgttgctag 37652420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 4552875 - 4552924
Alignment:
Q  170 atactcaatctcttattggtttaaatcattgtgggtctacactttgaaaa 219  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  4552875 atactcactctcttattggtttaaatcattgtgggtctacacattgaaaa 4552924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 167 - 267
Target Start/End: Complemental strand, 43414503 - 43414403
Alignment:
Q  167 ctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataa 266  Q
    ||||||||||  ||||| ||||||||||||||||||| |||| ||| ||||||  | ||   | ||||||||| | ||||||||||||||||||||||||    
T  43414503 ctaatactcaccctcttcttggtttaaatcattgtggatctatactctgaaaatagcacttacgcaaaatggtagaacatacattgatttcatccaataa 43414404  T
Q  267 a 267  Q
    |    
T  43414403 a 43414403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 25238299 - 25238410
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccaca-aaatggtgggacatacattgatt 255  Q
    |||||| ||||||  ||||| | | |||||||||||||||||||||| |||||||||||||||  |||||| || | || || || ||||||||||||||    
T  25238299 aacactttctctagcactcacttttttattggtttaaatcattgtggatctacactttgaaaatagaacccacaaagaagtgatgagacatacattgatt 25238398  T
Q  256 tcatccaataaa 267  Q
    | ||| ||||||    
T  25238399 ttatctaataaa 25238410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 20951673 - 20951603
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||| |||||||| || | |||||||||||||| | ||||| ||||||| ||||||||||||    
T  20951673 tacattgatttcacccaataaaagaataagtgctagagagtgctcaaaagagagtgttgctagcattcctc 20951603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 319
Target Start/End: Original strand, 25730472 - 25730625
Alignment:
Q  168 taatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    ||||| ||| ||| |||||||||||||||| |||| || ||||| || ||||  |||||| || || |||||| |||||||||  ||| |||||||||||    
T  25730472 taatattcactcttttattggtttaaatcactgtgagtttacacgttaaaaatagaacccacataatatggtgagacatacatgtattccatccaataaa 25730571  T
Q  268 tgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctcaac 319  Q
      |||||||| |||  |||||||| |||||| |  ||||||| |||| ||||||    
T  25730572 aaagtgagtgttagaaagagtgttcaaaagtaaacgttactaacatttctcaac 25730625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 32701603 - 32701466
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgct-- 279  Q
    |||||||||||||||||| ||| | ||||| || |||| |||||   || ||| |||||||| |||||||||||| |||||||||| ||||   ||||      
T  32701603 ttattggtttaaatcattatggatttacacgttaaaaattgaacatacataaagtggtgggatatacattgattttatccaataaaagagtagttgctaa 32701504  T
Q  280 agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    | | ||||||||||| ||| || |||||||||||||||    
T  32701503 aaaaagtgttgaaaaatgaatgatactagcattcctca 32701466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 42183003 - 42183076
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    ||||||||||||| |||||||| |||| |||||   |||||||||| ||||| |||||||||||||||||||||    
T  42183003 tacattgatttcacccaataaaagagttagtgccggagagagtgttcaaaagagagtgttactagcattcctca 42183076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 1107117 - 1107068
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  1107117 tggtgggacatacattgatttcacccaataaaagagtgggtgctagagag 1107068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 316
Target Start/End: Complemental strand, 1110291 - 1110195
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag--tgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||| || ||| |||||||||||||||||||||||  ||||||| ||||||||| |||||||  || |  |||| ||||||| ||||||||||||    
T  1110291 gaacccacataaagtggtgggacatacattgatttcactcaataaaagagtgagtgttagagagaatgctcgaaagagagtgttgctagcattcctc 1110195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 37719903 - 37719831
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgctag--agagtgttgaaaagtgagtgttactagcattcctc 316  Q
    |||||||||||||||||||||| |||||||||||||  |||||| | ||||| || |||| ||||||||||||    
T  37719903 tacattgatttcatccaataaaagagtgagtgctagaaagagtgctcaaaagagaatgttgctagcattcctc 37719831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 312
Target Start/End: Original strand, 4602890 - 4603046
Alignment:
Q  157 aacactctctctaatactcaatctcttatt-ggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatt 255  Q
    |||||||||||||||| ||| ||||||    ||||||||||||| | ||||| |||||| |||| |||||    ||||| || ||| ||||| |||||||    
T  4602890 aacactctctctaatagtcactctctttggcggtttaaatcattataggtctgcactttaaaaattgaacaa--acaaagtgatggaacatatattgatt 4602987  T
Q  256 tcatccaataaatgagtgagtgc--tagagagtgttgaaaagtgagtgttactagcatt 312  Q
    |||||||||||| |||||||| |   || ||| ||||||||||||||||| ||| ||||    
T  4602988 tcatccaataaaagagtgagtaccaaagggagcgttgaaaagtgagtgttgctaacatt 4603046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 318
Target Start/End: Original strand, 33678138 - 33678300
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    ||||| |||||||||| ||| | | |||||||||||||| |||||| |||||||| ||  |||  |||||| | ||   |||| || |||||||||||||    
T  33678138 aacacactctctaatattcacttttttattggtttaaattattgtgagtctacacatttgaaatagaacccacgcatg-tggttgggcatacattgattt 33678236  T
Q  257 catccaataaatgagtgagtg--ctagagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    ||| |||| || || | ||||   || |||||||| ||||||||||||| ||||||||||||||    
T  33678237 cattcaattaaagaataagtgttataaagagtgttcaaaagtgagtgttgctagcattcctcaa 33678300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 472187 - 472262
Alignment:
Q  159 cactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaa 234  Q
    |||||||| ||||||||  |||||||||||||||||||||||||| | || | |||||||| ||||| | ||||||    
T  472187 cactctctttaatactcgctctcttattggtttaaatcattgtggatatatattttgaaaattgaactcacacaaa 472262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 14489568 - 14489623
Alignment:
Q  164 tctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaa 219  Q
    ||||||||||||| ||| |||||||||||||| ||||||| |||||||||| ||||    
T  14489568 tctctaatactcattcttttattggtttaaattattgtggatctacactttaaaaa 14489623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 28898103 - 28898029
Alignment:
Q  246 tacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctcaa 318  Q
    |||||||||||||||||||||| |||||||||||  |||||||  | ||||| ||||||| ||||||||| ||||    
T  28898103 tacattgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcattcttcaa 28898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 30849372 - 30849285
Alignment:
Q  180 tcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaa 267  Q
    |||||||| ||||||||||||||| | ||  |||| ||||  ||||||  ||||| ||||||||| ||||||||||||||| ||||||    
T  30849372 tcttattgatttaaatcattgtggatttatcctttaaaaatagaacccatacaaattggtgggacgtacattgatttcatctaataaa 30849285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 41805877 - 41805959
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |  ||| |||||  ||||  ||||||| ||||||||||||    
T  41805877 tggtgggacatacattgattttatccaataaaagagtgagtgttaaagaaagtgtccaaaatagagtgttgctagcattcctc 41805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 313
Target Start/End: Original strand, 45270603 - 45270735
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctag 281  Q
    ||||||||||||||||||||| || |||||||| ||||  |||  | |||||||| |||  ||||||||| |||| ||||||||||  ||| |||| |||    
T  45270603 ttattggtttaaatcattgtgagtttacactttcaaaatcgaattcacacaaaatagtgatacatacattaattttatccaataaaaaagt-agtgttag 45270701  T
Q  282 ag--agtgttgaaaagtgagtgttactagcattc 313  Q
    ||  | ||||||||||||| ||||  ||||||||    
T  45270702 agaaaatgttgaaaagtgaatgttgatagcattc 45270735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 230 - 316
Target Start/End: Complemental strand, 2122880 - 2122792
Alignment:
Q  230 acaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagag--agtgttgaaaagtgagtgttactagcattcctc 316  Q
    ||||| |||||  ||||||||||||||||||| || || |||||| || |||||  ||| |||||||||||||||| ||||||| ||||    
T  2122880 acaaagtggtgatacatacattgatttcatcctatgaaagagtgattgatagagaaagtattgaaaagtgagtgttgctagcatacctc 2122792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 25666700 - 25666763
Alignment:
Q  242 gacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgtt 303  Q
    |||||||||||||||||||| ||||| |||||| || |  ||||||||||||||| ||||||||    
T  25666700 gacatacattgatttcatccgataaaagagtgaatgtttgagagagtgttgaaaaatgagtgtt 25666763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 267
Target Start/End: Complemental strand, 38104403 - 38104296
Alignment:
Q  161 ctctctctaatactcaatctcttattggtttaaatcattgtgggtc-tacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcat 259  Q
    |||||||||| ||||| ||||| ||||  |||| ||| |||||||| |||||||||  ||  ||||||  | ||| |||||| |||||||||||||| ||    
T  38104403 ctctctctaacactcactctctcattgaattaattcaatgtgggtcatacactttgggaatggaacccaaataaagtggtggaacatacattgattttat 38104304  T
Q  260 ccaataaa 267  Q
    ||||||||    
T  38104303 ccaataaa 38104296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 21447219 - 21447273
Alignment:
Q  247 acattgatttcatccaataaatgagtgagtgctagagagtgttgaaaagtgagtg 301  Q
    ||||||||||||  ||||||| ||||| ||| ||||||||||||||||| |||||    
T  21447219 acattgatttcacacaataaaagagtgggtgttagagagtgttgaaaagagagtg 21447273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 19193533 - 19193496
Alignment:
Q  280 agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  19193533 agagagtgttgaaaagagagtgttgctagcattcctca 19193496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 19193604 - 19193683
Alignment:
Q  236 tggtgggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattc 313  Q
    ||||||| ||||||||| ||| |||||||||  || |||||| |  |||||||||||||||| ||||||  |||||||||    
T  19193604 tggtgggtcatacattggttttatccaataagagaatgagtgttcaagagagtgttgaaaagagagtgtctctagcattc 19193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 41546133 - 41546211
Alignment:
Q  240 gggacatacattgatttcatccaataaatgagtgagtgct--agagagtgttgaaaagtgagtgttactagcattcctca 317  Q
    |||||||| ||||||| ||||||||||  |||||| || |  |||||||||||||||| ||||| | |||||||||||||    
T  41546133 gggacatatattgatt-catccaataagagagtgaatgtttgagagagtgttgaaaagagagtgatgctagcattcctca 41546211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 280
Target Start/End: Complemental strand, 27970 - 27847
Alignment:
Q  157 aacactctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgattt 256  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||  |||||| |||||| ||||||||||||||||||||     
T  27970 aacactctctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccacacaaagtggtgggacatacattgattc 27871  T
Q  257 catccaataaatgagtgagtgcta 280  Q
    ||||||||||| | ||||||||||    
T  27870 catccaataaaagcgtgagtgcta 27847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 9805 - 9694
Alignment:
Q  174 tcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtg 273  Q
    ||||||||||||| |||||||| |||||| ||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||||||||  ||||    
T  9805 tcaatctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtg 9706  T
Q  274 agtgctagagag 285  Q
    |||| |||||||    
T  9705 agtgttagagag 9694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 9673 - 9728
Alignment:
Q  142 aagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatca 197  Q
    ||||||||||||||||||||||||||||| ||||| | | ||||||| | ||||||    
T  9673 aagaggaatgctagcaacactctctctaacactcacttttttattggatgaaatca 9728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 11351 - 11240
Alignment:
Q  174 tcaatctcttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtg 273  Q
    ||||||||||||| |||||||| |||||| ||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||||||||  ||||    
T  11351 tcaatctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtg 11252  T
Q  274 agtgctagagag 285  Q
    |||| |||||||    
T  11251 agtgttagagag 11240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 11219 - 11274
Alignment:
Q  142 aagaggaatgctagcaacactctctctaatactcaatctcttattggtttaaatca 197  Q
    ||||||||||||||||||||||||||||| ||||| | | ||||||| | ||||||    
T  11219 aagaggaatgctagcaacactctctctaacactcacttttttattggatgaaatca 11274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 26909 - 27004
Alignment:
Q  182 ttattggtttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    ||||||||||||| |||| ||||||||| ||||||||| ||||||| |||||| |||||| ||||||||||||||  ||||||||  |||||||||    
T  26909 ttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtgagtg 27004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 2346 - 2252
Alignment:
Q  189 tttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||||||||||| |||||| ||| |||| || ||| | ||||| | ||| |||||||||||||||||||  ||||| |||||||||||||||||    
T  2346 tttaaatcattgtggatctacattttaaaaa-tgcaccac-acaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagagag 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 2377 - 2283
Alignment:
Q  189 tttaaatcattgtgggtctacactttgaaaactgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgctagagag 285  Q
    ||||||||||||||| |||||| ||| |||| || ||| | ||||| | ||| |||||||||||||||||||  ||||| |||||||||||||||||    
T  2377 tttaaatcattgtggatctacattttaaaaa-tgcaccac-acaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagagag 2283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 35687 - 35632
Alignment:
Q  222 gaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 277  Q
    |||||| || |||||| |||||||||||||||||||||| |||||  |||||||||    
T  35687 gaacccacataaaatgatgggacatacattgatttcatcaaataagagagtgagtg 35632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 8436 - 8494
Alignment:
Q  160 actctctctaatactcaatctcttattggtttaaatcattgtgggtctacactttgaaa 218  Q
    ||||||| ||||||| | ||| |||||||||||||||||| || |||||||||| ||||    
T  8436 actctctttaatactaattcttttattggtttaaatcattatgagtctacacttcgaaa 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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