View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3870_low_5 (Length: 452)

Name: NF3870_low_5
Description: NF3870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3870_low_5
NF3870_low_5
[»] scaffold0349 (3 HSPs)
scaffold0349 (9-431)||(3402-3825)
scaffold0349 (8-427)||(14341-14758)
scaffold0349 (8-152)||(8061-8205)
[»] chr6 (83 HSPs)
chr6 (1-431)||(27604686-27605122)
chr6 (8-429)||(28780922-28781343)
chr6 (8-427)||(27610987-27611406)
chr6 (8-427)||(27718364-27718783)
chr6 (9-427)||(27724830-27725248)
chr6 (8-431)||(27698475-27698897)
chr6 (8-429)||(28786061-28786482)
chr6 (1-429)||(26802214-26802646)
chr6 (10-429)||(28792184-28792603)
chr6 (1-415)||(26655765-26656179)
chr6 (1-415)||(26761736-26762150)
chr6 (57-431)||(27593001-27593375)
chr6 (31-431)||(27678752-27679152)
chr6 (8-332)||(27229017-27229339)
chr6 (57-427)||(27677599-27677969)
chr6 (15-429)||(31284078-31284492)
chr6 (31-431)||(27706383-27706783)
chr6 (51-415)||(26646299-26646669)
chr6 (51-415)||(26752267-26752637)
chr6 (85-429)||(26884023-26884369)
chr6 (106-427)||(27531182-27531503)
chr6 (35-427)||(27338050-27338442)
chr6 (35-427)||(27398790-27399182)
chr6 (54-415)||(26622805-26623166)
chr6 (54-415)||(26728783-26729144)
chr6 (8-406)||(26823629-26824021)
chr6 (55-429)||(26861446-26861817)
chr6 (119-415)||(25579613-25579909)
chr6 (119-429)||(25481636-25481946)
chr6 (119-415)||(26142759-26143055)
chr6 (119-415)||(26055820-26056116)
chr6 (119-415)||(26075790-26076086)
chr6 (8-429)||(27427589-27428005)
chr6 (119-429)||(26048739-26049049)
chr6 (119-429)||(26069908-26070218)
chr6 (119-415)||(25538434-25538730)
chr6 (120-427)||(28226845-28227152)
chr6 (120-427)||(28234459-28234765)
chr6 (123-427)||(28242702-28243006)
chr6 (87-427)||(28325343-28325683)
chr6 (61-415)||(28139377-28139731)
chr6 (143-427)||(28181032-28181316)
chr6 (157-427)||(26848592-26848862)
chr6 (81-427)||(28185222-28185568)
chr6 (156-427)||(29825958-29826229)
chr6 (59-423)||(26341920-26342290)
chr6 (59-427)||(28098354-28098725)
chr6 (157-346)||(25506975-25507158)
chr6 (199-396)||(28149912-28150108)
chr6 (204-424)||(26937073-26937293)
chr6 (204-427)||(28297698-28297921)
chr6 (204-427)||(28514152-28514375)
chr6 (144-426)||(27214336-27214618)
chr6 (144-426)||(27234610-27234892)
chr6 (155-427)||(26949591-26949863)
chr6 (169-427)||(26811453-26811711)
chr6 (171-360)||(27665169-27665358)
chr6 (171-422)||(26635636-26635887)
chr6 (171-422)||(26741602-26741853)
chr6 (171-421)||(26974998-26975248)
chr6 (57-396)||(2184117-2184459)
chr6 (8-83)||(25538356-25538431)
chr6 (207-396)||(2184880-2185069)
chr6 (8-84)||(26055742-26055818)
chr6 (8-83)||(25481558-25481633)
chr6 (8-83)||(26048661-26048736)
chr6 (8-83)||(26069830-26069905)
chr6 (8-83)||(26075712-26075787)
chr6 (8-83)||(26142681-26142756)
chr6 (195-340)||(26893543-26893688)
chr6 (155-355)||(25071589-25071789)
chr6 (39-83)||(25579566-25579610)
chr6 (171-357)||(26959111-26959298)
chr6 (165-250)||(26617266-26617351)
chr6 (165-250)||(26723194-26723279)
chr6 (188-272)||(28491660-28491744)
chr6 (188-272)||(29804070-29804154)
chr6 (307-422)||(24715667-24715782)
chr6 (195-274)||(29467797-29467876)
chr6 (63-129)||(26018770-26018836)
chr6 (63-129)||(26139474-26139540)
chr6 (307-343)||(26617401-26617437)
chr6 (307-343)||(26723329-26723365)
[»] scaffold0277 (2 HSPs)
scaffold0277 (8-429)||(13615-14036)
scaffold0277 (10-426)||(4657-5073)
[»] scaffold0419 (1 HSPs)
scaffold0419 (31-429)||(7331-7729)
[»] chr4 (8 HSPs)
chr4 (12-396)||(18699403-18699787)
chr4 (12-406)||(18731497-18731891)
chr4 (12-396)||(18679570-18679954)
chr4 (12-415)||(18655461-18655864)
chr4 (54-406)||(18724078-18724430)
chr4 (8-429)||(18073550-18073966)
chr4 (8-429)||(17989026-17989439)
chr4 (129-427)||(5090939-5091237)
[»] scaffold1254 (1 HSPs)
scaffold1254 (31-319)||(10-298)
[»] chr1 (3 HSPs)
chr1 (26-429)||(28164333-28164735)
chr1 (31-429)||(28127649-28128042)
chr1 (46-415)||(268341-268711)
[»] chr8 (3 HSPs)
chr8 (59-415)||(29273767-29274123)
chr8 (107-343)||(31903733-31903969)
chr8 (169-340)||(16373134-16373305)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-429)||(59358-59774)
[»] scaffold0038 (4 HSPs)
scaffold0038 (120-427)||(34620-34927)
scaffold0038 (120-427)||(27343-27650)
scaffold0038 (123-427)||(42864-43168)
scaffold0038 (87-427)||(116658-116998)
[»] scaffold0019 (1 HSPs)
scaffold0019 (87-427)||(58267-58607)
[»] chr5 (1 HSPs)
chr5 (158-427)||(16688944-16689213)
[»] chr2 (3 HSPs)
chr2 (129-360)||(3279592-3279823)
chr2 (168-360)||(17993736-17993928)
chr2 (226-343)||(17711967-17712084)
[»] scaffold0713 (1 HSPs)
scaffold0713 (63-129)||(5916-5982)


Alignment Details
Target: scaffold0349 (Bit Score: 320; Significance: 1e-180; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 9 - 431
Target Start/End: Complemental strand, 3825 - 3402
Alignment:
Q  9 cattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacat 108  Q
    |||||||||||||||||| || ||||||||||||||| |||||| |||||| |||||||||| |||||||||||||| ||||||||||||||||||  ||    
T  3825 cattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggat 3726  T
Q  109 tcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacctt 208  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  3725 tcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacctt 3626  T
Q  209 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa- 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||     
T  3625 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaac 3526  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaa 407  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  3525 ctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttatttggtgtggaa 3426  T
Q  408 ccttctcatgtgcgacatcataaa 431  Q
    ||| ||  ||||||||||| ||||    
T  3425 cctactattgtgcgacatcgtaaa 3402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 8 - 427
Target Start/End: Complemental strand, 14758 - 14341
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||  |    
T  14758 tcattcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatgga 14660  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  14659 ttcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 14560  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14559 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaa 14460  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaa 407  Q
    |||||||| |||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  14459 ctatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaa 14361  T
Q  408 ccttctcatgtgcgacatca 427  Q
    ||| || | |||||||||||    
T  14360 cctactaacgtgcgacatca 14341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 8205 - 8061
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||| ||  |    
T  8205 tcattcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatgga 8106  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcgg 152  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  8105 ttcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 318; Significance: 1e-179; HSPs: 83)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 431
Target Start/End: Complemental strand, 27605122 - 27604686
Alignment:
Q  1 aacttattcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctc------ttc 94  Q
    |||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||      |||    
T  27605122 aacttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattctcatggctatgcaattaccttcctcatcctcatcctcttc 27605023  T
Q  95 attttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaag 194  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  27605022 attttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaag 27604923  T
Q  195 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctg 294  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||  ||||||||||||| ||||| ||||||||||||||||    
T  27604922 ggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttattcctg 27604823  T
Q  295 tgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgtttt 394  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  27604822 tgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtcgttttgcctgtttt 27604723  T
Q  395 ctttggtgtggaaccttctcatgtgcgacatcataaa 431  Q
    |||||||||||||||||||||||||||||||||||||    
T  27604722 ctttggtgtggaaccttctcatgtgcgacatcataaa 27604686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 8 - 429
Target Start/End: Original strand, 28780922 - 28781343
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    |||||||||||||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| | ||    
T  28780922 tcattcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgca 28781021  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||    
T  28781022 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaacct 28781121  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28781122 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaa 28781221  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaa 407  Q
    ||||||| ||||   |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  28781222 ctatgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggat 28781321  T
Q  408 ccttctcatgtgcgacatcata 429  Q
    ||| || |||||||||||||||    
T  28781322 cctactaatgtgcgacatcata 28781343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 8 - 427
Target Start/End: Complemental strand, 27611406 - 27610987
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||| |||||||||||||||  |    
T  27611406 tcattcatattctgcattctcaaactcttttttcatccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatgga 27611307  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27611306 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 27611207  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27611206 tcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaa 27611107  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaa 407  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  27611106 ctatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaa 27611007  T
Q  408 ccttctcatgtgcgacatca 427  Q
    ||| || | |||||||||||    
T  27611006 cctactaaagtgcgacatca 27610987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 8 - 427
Target Start/End: Complemental strand, 27718783 - 27718364
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||| ||  |    
T  27718783 tcattcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatgga 27718684  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27718683 ttcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 27718584  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27718583 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaa 27718484  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaa 407  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  27718483 ctatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaa 27718384  T
Q  408 ccttctcatgtgcgacatca 427  Q
    ||| || | |||||||||||    
T  27718383 cctactaacgtgcgacatca 27718364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 9 - 427
Target Start/End: Complemental strand, 27725248 - 27724830
Alignment:
Q  9 cattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacat 108  Q
    |||||||||||||||||| || ||||||||||||||| |||||| |||||| |||||||||| |||||||||||||| ||||||||||||||||||  ||    
T  27725248 cattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggat 27725149  T
Q  109 tcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacctt 208  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  27725148 tcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacctt 27725049  T
Q  209 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaac 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27725048 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaac 27724949  T
Q  309 tatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaac 408  Q
    ||||||| |||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  27724948 tatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaac 27724849  T
Q  409 cttctcatgtgcgacatca 427  Q
    || || | |||||||||||    
T  27724848 ctactaacgtgcgacatca 27724830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 8 - 431
Target Start/End: Complemental strand, 27698897 - 27698475
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||  |    
T  27698897 tcattcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatgga 27698799  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27698798 ttcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 27698699  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  27698698 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaa 27698599  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaa 407  Q
    |||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  27698598 ctatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgttttgcctgttttcttcggtgtggaa 27698499  T
Q  408 ccttctcatgtgcgacatcataaa 431  Q
    ||  || ||||| |||||||||||    
T  27698498 ccaactaatgtgagacatcataaa 27698475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 8 - 429
Target Start/End: Original strand, 28786061 - 28786482
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    |||||||||||||| |||| || |||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||  |    
T  28786061 tcattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatgga 28786160  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| | ||||    
T  28786161 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacct 28786260  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28786261 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaa 28786360  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaa 407  Q
    ||| ||| | ||   |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||     
T  28786361 ctacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgat 28786460  T
Q  408 ccttctcatgtgcgacatcata 429  Q
    ||| || |||||||||||||||    
T  28786461 cctactaatgtgcgacatcata 28786482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 429
Target Start/End: Original strand, 26802214 - 26802646
Alignment:
Q  1 aacttattcattcatattctgcattcccagactctttt----ttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcat 96  Q
    |||||| ||||||||||||||||||| || ||||||||    ||||||||||||||  ||||| ||||||||||||| || |||||||| ||||||||||    
T  26802214 aacttactcattcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcat 26802313  T
Q  97 tttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaaggg 196  Q
    |||| |||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  26802314 tttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaaggg 26802413  T
Q  197 aatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26802414 aatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtg 26802513  T
Q  297 ttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttct 396  Q
    |||||||||||||||||||||||   |||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||||    
T  26802514 ttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttgcctattttct 26802613  T
Q  397 ttggtgtggaaccttctcatgtgcgacatcata 429  Q
    |||||||||| ||| || ||||||| |||||||    
T  26802614 ttggtgtggatcctactaatgtgcgccatcata 26802646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 10 - 429
Target Start/End: Original strand, 28792184 - 28792603
Alignment:
Q  10 attcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacatt 109  Q
    |||||||||||| |||| || |||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||  |||    
T  28792184 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 28792283  T
Q  110 cacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttc 209  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||    
T  28792284 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 28792383  T
Q  210 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaact 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28792384 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaact 28792483  T
Q  310 atgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaacc 409  Q
    | ||| | ||   |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||    
T  28792484 acgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcc 28792583  T
Q  410 ttctcatgtgcgacatcata 429  Q
    | || |||||||||||||||    
T  28792584 tactaatgtgcgacatcata 28792603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 415
Target Start/End: Original strand, 26655765 - 26656179
Alignment:
Q  1 aacttattcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttc 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  26655765 aacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttc 26655864  T
Q  101 ctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatc 200  Q
    ||||   || |  ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  26655865 ctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatc 26655964  T
Q  201 cataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgtttt 300  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||  | ||||    
T  26655965 catactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatatttt 26656064  T
Q  301 ctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttgg 400  Q
    ||  ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |    |||||||||||||||| |||    
T  26656065 ctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgcctgttttctatgg 26656164  T
Q  401 tgtggaaccttctca 415  Q
    |||||| ||| ||||    
T  26656165 tgtggatcctactca 26656179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 415
Target Start/End: Original strand, 26761736 - 26762150
Alignment:
Q  1 aacttattcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttc 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  26761736 aacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttc 26761835  T
Q  101 ctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatc 200  Q
    ||||   || |  ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  26761836 ctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatc 26761935  T
Q  201 cataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgtttt 300  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||  | ||||    
T  26761936 catactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatatttt 26762035  T
Q  301 ctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttgg 400  Q
    ||  ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |    |||||||||||||||| |||    
T  26762036 ctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgcctgttttctatgg 26762135  T
Q  401 tgtggaaccttctca 415  Q
    |||||| ||| ||||    
T  26762136 tgtggatcctactca 26762150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 57 - 431
Target Start/End: Complemental strand, 27593375 - 27593001
Alignment:
Q  57 attctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacg 156  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||   | ||  |||||||| ||||||||||| || || | |||||||||| |||    
T  27593375 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 27593276  T
Q  157 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    |||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27593275 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 27593176  T
Q  257 catcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcat 356  Q
      |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||    
T  27593175 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcat 27593076  T
Q  357 tgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatcataaa 431  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27593075 tgctacaagacaaagggtcgccctgttttgcctgttttctttggtgtggatccttctcatgtgcgacatcataaa 27593001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 31 - 431
Target Start/End: Original strand, 27678752 - 27679152
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||||||||| ||||||| | || ||||||||||||||||||||||||||||||| ||||| ||||||||   | ||  |||||||| ||||||||    
T  27678752 actcttttttcatctaatttctctaaaatctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcag 27678851  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
    ||| || || | |||||||||| ||||||| || || ||||||||||||||||||||||||||||||||| | |||||||||||| | |||| |||||||    
T  27678852 tttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaa 27678951  T
Q  231 agaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtt 330  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27678952 agaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtt 27679051  T
Q  331 tggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatcataa 430  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||| |||    
T  27679052 tggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttctttggtgtggaacctactgttgtgcgacatcgtaa 27679151  T
Q  431 a 431  Q
    |    
T  27679152 a 27679152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 8 - 332
Target Start/End: Original strand, 27229017 - 27229339
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    |||||||||||||||||||  | ||||||||  |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| |  |    
T  27229017 tcattcatattctgcattctaaaactctttt--catccaatttctctcaagtctcatggctatacaatcaccttcctcttcctcttcattttcctttgga 27229114  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27229115 ttcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccatacct 27229214  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||  | ||||||  |||    
T  27229215 tcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgccaa 27229314  T
Q  308 ctatgcctcttcttcattttgtttg 332  Q
    |||||| ||||||||||||||||||    
T  27229315 ctatgcatcttcttcattttgtttg 27229339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 57 - 427
Target Start/End: Complemental strand, 27677969 - 27677599
Alignment:
Q  57 attctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacg 156  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||   | ||  |||||||| ||||||| ||| || || | |||||||||| |||    
T  27677969 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacg 27677870  T
Q  157 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    |||| || |||||||||||||||||||||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  27677869 gtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 27677770  T
Q  257 catcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcat 356  Q
      |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||     
T  27677769 tctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcac 27677670  T
Q  357 tgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||  ||||||||||||    
T  27677669 tgctacaagacaaagggtcgcctcgttctgcctgttttctttgctgtggaacctactattgtgcgacatca 27677599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 429
Target Start/End: Original strand, 31284078 - 31284492
Alignment:
Q  15 tattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcactt 114  Q
    |||||||||||| || | ||||| ||||||||  |||| |||| ||||||||||||||||||| ||||||||||||||||| ||||||||  |||||  |    
T  31284078 tattctgcattctcaaattctttcttcatccatattctctcaaatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaat 31284177  T
Q  115 accaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattga 214  Q
    ||||||| ||||| ||||| ||||| | |||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31284178 accaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattga 31284277  T
Q  215 tgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcc 314  Q
    ||| | ||| ||||||||||| |||||||||||||||||||||  ||| ||||||||||| |||||||||||||| || |||||||||  ||||||||||    
T  31284278 tgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcc 31284377  T
Q  315 tcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctc 414  Q
    ||||| || ||||||||||| |||||||| ||||||||||| |  || |||  ||| ||||||||||||||||| ||||||||||| ||||| |||||||    
T  31284378 tcttcgtcgttttgtttggacgaacttgtccacatcattcacttgtataagcaaaatggtcgcctcgttttgcccgttttctttggcgtggatccttctc 31284477  T
Q  415 atgtgcgacatcata 429  Q
    |||||||||||||||    
T  31284478 atgtgcgacatcata 31284492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 31 - 431
Target Start/End: Complemental strand, 27706783 - 27706383
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||||||||| ||||||| | || ||||||||||||||||||||||| ||||||| ||||| ||||||||   | ||  |||||||| ||||||||    
T  27706783 actcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcag 27706684  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
    ||| || ||   |||||||||| ||||||| || |||||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||    
T  27706683 tttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaa 27706584  T
Q  231 agaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtt 330  Q
    ||| | ||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27706583 agaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 27706484  T
Q  331 tggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatcataa 430  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||  ||||||||||| |||    
T  27706483 tggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttatttggtgtagaacctactattgtgcgacatcgtaa 27706384  T
Q  431 a 431  Q
    |    
T  27706383 a 27706383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 51 - 415
Target Start/End: Original strand, 26646299 - 26646669
Alignment:
Q  51 ctttcaattctcatggctatgcaatcaccttcc------tcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattg 144  Q
    |||||||||||||||||||||||||| ||||||      |||||||||| | |||||||   |||||| ||||| || |||||||  || ||||||| ||    
T  26646299 ctttcaattctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtg 26646398  T
Q  145 acactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaat 244  Q
    |||||||  |||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||   ||||||| | ||||||||||||||    
T  26646399 acactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaat 26646498  T
Q  245 cacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgtt 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||     
T  26646499 cacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtc 26646598  T
Q  345 cacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| ||||| ||| ||||    
T  26646599 cacatcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactca 26646669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 51 - 415
Target Start/End: Original strand, 26752267 - 26752637
Alignment:
Q  51 ctttcaattctcatggctatgcaatcaccttcc------tcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattg 144  Q
    |||||||||||||||||||||||||| ||||||      |||||||||| | |||||||   |||||| ||||| || |||||||  || ||||||| ||    
T  26752267 ctttcaattctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtg 26752366  T
Q  145 acactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaat 244  Q
    |||||||  |||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||   ||||||| | ||||||||||||||    
T  26752367 acactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaat 26752466  T
Q  245 cacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgtt 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||     
T  26752467 cacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtc 26752566  T
Q  345 cacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| ||||| ||| ||||    
T  26752567 cacatcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactca 26752637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 85 - 429
Target Start/End: Original strand, 26884023 - 26884369
Alignment:
Q  85 cttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctct 184  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| || || | |||||||||| | ||||| ||||| |||||||||||||||||    
T  26884023 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 26884122  T
Q  185 tactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatt 284  Q
    |||| ||||||||||||| |||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||||||||||||||||||||||| |||    
T  26884123 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 26884222  T
Q  285 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcaca--tcattcattgctacaagacaaagggtcgcctcgt 382  Q
    ||||||||  | ||||||| ||||||||| |||||||||||||||||||| |||||||| ||||  ||||||| |||||| |||||||||||||||||||    
T  26884223 tttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgagacaaagggtcgcctcgt 26884322  T
Q  383 tttgcctgttttctttggtgtggaaccttctcatgtgcgacatcata 429  Q
    ||||||||||||  |||||||||| ||| || |||||||||||||||    
T  26884323 tttgcctgtttttgttggtgtggatcctactgatgtgcgacatcata 26884369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 106 - 427
Target Start/End: Complemental strand, 27531503 - 27531182
Alignment:
Q  106 cattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatac 205  Q
    |||||||||||||||||||||||||||||||||||   |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| ||||    
T  27531503 cattcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatac 27531404  T
Q  206 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||| ||||||||||||||||||| || ||||||       
T  27531403 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaa 27531304  T
Q  306 aactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtgg 405  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||||| | || ||||||||||||||  |||||||||    
T  27531303 aactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacgatacaaagggttgtcttgttttgcctgtttttattggtgtgg 27531204  T
Q  406 aaccttctcatgtgcgacatca 427  Q
    | ||| || |||||||||||||    
T  27531203 atcctactgatgtgcgacatca 27531182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 35 - 427
Target Start/End: Complemental strand, 27338442 - 27338050
Alignment:
Q  35 ttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagtttt 134  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |   ||||  ||||| |||||||||||||||    
T  27338442 ttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagtttt 27338343  T
Q  135 aggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagag 234  Q
    |||| |||||||||||   |||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||| ||||||    
T  27338342 agggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagag 27338243  T
Q  235 gagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttgga 334  Q
    ||||||||| ||||||||||||  |||||||||||||||| ||||||||||| |||||  | ||||||   |||||||| |||||||||||||| |||||    
T  27338242 gagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttgga 27338143  T
Q  335 tgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
     |||||||| ||||||||||| ||||||||||||| |||| |    |||||||||||||||| ||||| ||| ||| |||| || ||||||||    
T  27338142 cgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatca 27338050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 35 - 427
Target Start/End: Complemental strand, 27399182 - 27398790
Alignment:
Q  35 ttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagtttt 134  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |   ||||  ||||| |||||||||||||||    
T  27399182 ttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagtttt 27399083  T
Q  135 aggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagag 234  Q
    |||| |||||||||||   |||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||| ||||||    
T  27399082 agggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagag 27398983  T
Q  235 gagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttgga 334  Q
    ||||||||| ||||||||||||  |||||||||||||||| ||||||||||| |||||  | ||||||   |||||||| |||||||||||||| |||||    
T  27398982 gagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttgga 27398883  T
Q  335 tgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
     |||||||| ||||||||||| ||||||||||||| |||| |    |||||||||||||||| ||||| ||| ||| |||| || ||||||||    
T  27398882 cgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatca 27398790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 54 - 415
Target Start/End: Original strand, 26622805 - 26623166
Alignment:
Q  54 tcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggc 153  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||||||  |||||  |||||||||||||| ||||| || |||| ||||||||||     
T  26622805 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26622904  T
Q  154 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 253  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| ||||||    
T  26622905 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26623004  T
Q  254 actcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcatt 353  Q
    |||   ||| || || ||||| |||||||||||||||||||||||||||  ||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  26623005 acttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcatt 26623104  T
Q  354 cattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    || |||||||| ||||||||||| ||||||||||| || |||| ||| ||||| ||| ||||    
T  26623105 cactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactca 26623166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 54 - 415
Target Start/End: Original strand, 26728783 - 26729144
Alignment:
Q  54 tcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggc 153  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||||||  |||||  |||||||||||||| ||||| || |||| ||||||||||     
T  26728783 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26728882  T
Q  154 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 253  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| ||||||    
T  26728883 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26728982  T
Q  254 actcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcatt 353  Q
    |||   ||| || || ||||| |||||||||||||||||||||||||||  ||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  26728983 acttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcatt 26729082  T
Q  354 cattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    || |||||||| ||||||||||| ||||||||||| || |||| ||| ||||| ||| ||||    
T  26729083 cactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactca 26729144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 8 - 406
Target Start/End: Original strand, 26823629 - 26824021
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||| ||| |||||||||| |||||||||||||||||||| ||| ||||      ||||||| |||| |||       
T  26823629 tcattcatattctgcattctcaaactctttcttcgtccaatttctctcaattctcatggctatgcagtcaacttc------ctcttcagtttcatatgat 26823722  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    ||||  ||||||||||| ||||||||||| |||  |||||||||| | |  ||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  26823723 ttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttacagacaagggaatccacacct 26823822  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    |  |||||||   ||| ||||||||||| ||| |||||  || ||||||||  || ||||||||||| |||||||||||||||||||||||||||  |||    
T  26823823 tttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttttattcctgtgttttctgccaa 26823922  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtgga 406  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    |||||||  |||||| |||||||||||||||||||||| |||||||||    
T  26823923 ctatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctacaaggaaaaggggcgcctcgttttgcctgttttctatggtgtgga 26824021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 55 - 429
Target Start/End: Original strand, 26861446 - 26861817
Alignment:
Q  55 caattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggca 154  Q
    ||||||| ||||||||||||||||||| ||||||||||||  ||||||||  |||||  ||||| || ||||||||||| || || | |||||||||| |    
T  26861446 caattctgatggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggta 26861545  T
Q  155 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 254  Q
     |||||||| || |||||||||||||||||||||||||||||||| || |||||||| |||||   ||| ||||||||||| |||||||||| |  ||||    
T  26861546 tggttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatca 26861645  T
Q  255 ctcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattc 354  Q
    |||  ||| ||||||||||| ||||| ||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| || ||||||     
T  26861646 ctcgacaatgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcatta 26861745  T
Q  355 attgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatcata 429  Q
    |   || ||||  |||||||||| |||||||||||||||||| |||  |||| ||| || |||||||||||||||    
T  26861746 a---ctgcaaggaaaagggtcgcgtcgttttgcctgttttctatggcatggatcctactaatgtgcgacatcata 26861817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 119 - 415
Target Start/End: Original strand, 25579613 - 25579909
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| || |||| |||||||||  ||  |||||| || |||||||| |||||||||  |||||||||||| | ||||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctctt 318  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  | ||||||  ||||||||| ||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 25579812  T
Q  319 cttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||| || || | || ||||| ||||||| || |||||||||| ||||    
T  25579813 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactca 25579909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 119 - 429
Target Start/End: Original strand, 25481636 - 25481946
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctctt 318  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||  | ||||||  ||||||||| ||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatctt 25481835  T
Q  319 cttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgt 418  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||| || || | || || || ||||||| ||||||||| ||| || ||||    
T  25481836 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtggatcctactgatgt 25481935  T
Q  419 gcgacatcata 429  Q
     |||| |||||    
T  25481936 tcgacgtcata 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 119 - 415
Target Start/End: Original strand, 26142759 - 26143055
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctctt 318  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  | ||||||  ||||||||| ||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 26142958  T
Q  319 cttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||| || || | || || || ||||||| || |||||||||| ||||    
T  26142959 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactca 26143055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 119 - 415
Target Start/End: Original strand, 26055820 - 26056116
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctctt 318  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| |||||||||||||  | ||||||  ||||||||| ||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26056019  T
Q  319 cttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||| |||||| || || | || ||||| ||||||| || |||||||||| ||||    
T  26056020 cttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactca 26056116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 119 - 415
Target Start/End: Original strand, 26075790 - 26076086
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctctt 318  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| |||||||||||||  | ||||||  ||||||||| ||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26075989  T
Q  319 cttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||| |||||| || || | || ||||| ||||||| || |||||||||| ||||    
T  26075990 cttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactca 26076086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 429
Target Start/End: Complemental strand, 27428005 - 27427589
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||| |  ||||  |||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||    
T  27428005 tcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgca 27427908  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||| |||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||||||||| | |||||    
T  27427907 ttcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacct 27427808  T
Q  208 tcattgatgacaatga------tcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttc 301  Q
    ||  ||||||| ||||      |||||||||| ||||  || ||||||||    |||| |      |||||||||| |||||||| |||||  | |||||    
T  27427807 tccatgatgacgatgacagtgatcttcaaagaagagacaaagtcacaccaa---tcatta------ttgaagaatccaggattttgattcccatattttc 27427717  T
Q  302 tatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggt 401  Q
    |  ||||||||| |||||||||| |||||||||   |||||| ||||||||||| |||||||| || |||||| ||||||||||||||||||||||||||    
T  27427716 tgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggt 27427617  T
Q  402 gtggaaccttctcatgtgcgacatcata 429  Q
    ||||||||| || |||||||||||||||    
T  27427616 gtggaacctactgatgtgcgacatcata 27427589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 119 - 429
Target Start/End: Original strand, 26048739 - 26049049
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctctt 318  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| |||||||||||||||||||||||  | ||||||  ||||||||| ||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26048938  T
Q  319 cttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgt 418  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||| || || | || ||||| ||||| | || |||||||||| ||||  |    
T  26048939 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacat 26049038  T
Q  419 gcgacatcata 429  Q
     ||||||||||    
T  26049039 acgacatcata 26049049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 119 - 429
Target Start/End: Original strand, 26069908 - 26070218
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctctt 318  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| |||||||||||||||||||||||  | ||||||  ||||||||| ||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26070107  T
Q  319 cttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgt 418  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||| || || | || ||||| ||||| | || |||||||||| ||||  |    
T  26070108 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacat 26070207  T
Q  419 gcgacatcata 429  Q
     ||||||||||    
T  26070208 acgacatcata 26070218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 119 - 415
Target Start/End: Original strand, 25538434 - 25538730
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| |||||||||  ||||||||||||   ||| ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctctt 318  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatctt 25538633  T
Q  319 cttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    |||||||||||||||| |||||||| || |||||||| ||||||||||||||| || || | || ||||| ||||||| || |||||||||| ||||    
T  25538634 cttcattttgtttggacgaacttgtccagatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactca 25538730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 120 - 427
Target Start/End: Original strand, 28226845 - 28227152
Alignment:
Q  120 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| |||||||| || |||||||||||  | ||||||||||| ||||||||||  | ||||  | | |||||||| || || ||| ||||||| |    
T  28226845 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 28226944  T
Q  220 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttc 319  Q
      || |||||| |||| |||||||| ||| |||||||  |||||| ||||||||||||||||||||| |||||||| || |||||||| ||||| |||||    
T  28226945 gagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttc 28227044  T
Q  320 ttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtg 419  Q
    ||||||||| ||||| |||||||| |||||||||||||||| ||||  |||  | ||||| ||||||||  |||||| || |||||||||||||||||||    
T  28227045 ttcattttgcttggacgaacttgtccacatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatgatgtggaaccttctcatgtg 28227144  T
Q  420 cgacatca 427  Q
    ||||||||    
T  28227145 cgacatca 28227152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 120 - 427
Target Start/End: Original strand, 28234459 - 28234765
Alignment:
Q  120 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| |||||||| || | |||||||||  | |||||||| |  |||||||| |  ||||||  | ||||||||||||| ||||||||||||||||    
T  28234459 gtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgaca 28234558  T
Q  220 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttc 319  Q
      || |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||||||||| |||||||| || |||||||| ||||| |||||    
T  28234559 gggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttc 28234658  T
Q  320 ttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtg 419  Q
    ||||||||| ||||| |||||||| ||||||||| | |||| | ||  |||  | ||||| ||||||||  |||||| || ||||||||||||||| |||    
T  28234659 ttcattttgcttggacgaacttgtccacatcattta-tgcttcgaggaaaatagacgcctagttttgccaattttctatgatgtggaaccttctcacgtg 28234757  T
Q  420 cgacatca 427  Q
    ||||||||    
T  28234758 cgacatca 28234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 123 - 427
Target Start/End: Original strand, 28242702 - 28243006
Alignment:
Q  123 ttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    ||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  223 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttc 322  Q
    | |||| | |||| ||  |||| |||||||||||  |||||||||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28242901  T
Q  323 attttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcga 422  Q
    |||||| ||||| |||||||| ||||||||||| |||| ||||| ||| || ||||| ||||||||  |||||| || ||||||||||||| | ||| ||    
T  28242902 attttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaaccttctaacgtgaga 28243001  T
Q  423 catca 427  Q
    |||||    
T  28243002 catca 28243006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 87 - 427
Target Start/End: Original strand, 28325343 - 28325683
Alignment:
Q  87 tcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 186  Q
    |||||||| |||||||||  |||||| ||  | |||||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  187 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttt 286  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  |||||||||||||||| |||||||||||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 28325542  T
Q  287 tattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttg 386  Q
     |||||| | || |||||||| ||||| |||||||| ||||| |||||||||||||| ||||| ||||| |||| |||   ||| || ||||| |||| |    
T  28325543 cattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgcttcaaagaaaatgggcgcctagtttag 28325642  T
Q  387 cctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    || |||||||  | ||||||||||||||| |||||||||||    
T  28325643 ccagttttctacgatgtggaaccttctcacgtgcgacatca 28325683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 61 - 415
Target Start/End: Original strand, 28139377 - 28139731
Alignment:
Q  61 tcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttt 160  Q
    |||||||| ||||| ||||||| |||||  |||| || ||||||   ||||| ||| | || || ||||| || || |||| |||||||||   ||||||    
T  28139377 tcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggttt 28139476  T
Q  161 tactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 260  Q
     ||||| ||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| || |||||  |||| |||||| |     
T  28139477 cactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgta 28139576  T
Q  261 aaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgct 360  Q
    || ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||| ||||| |||||||| ||||||||| | ||||    
T  28139577 aaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgct 28139676  T
Q  361 acaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
     ||| ||||||||  |  | |||||||||||||||| ||||||||| ||||||||    
T  28139677 tcaacacaaagggatgtttggttttgcctgttttctatggtgtggatccttctca 28139731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 143 - 427
Target Start/End: Original strand, 28181032 - 28181316
Alignment:
Q  143 tgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaa 242  Q
    |||||||||  | ||||||||||| |||||| | |  ||||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || |||    
T  28181032 tgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaa 28181131  T
Q  243 atcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttg 342  Q
    || ||| |||||||  |||||||||||||||| ||||||||||| ||||| || || |||||||| ||||| |||||||||||||| ||||| |||||||    
T  28181132 ataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttg 28181231  T
Q  343 ttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    | ||||||||||| |||| ||||  ||  || || || ||||||||  |||||| || ||||||||||||||| |||||||||||    
T  28181232 tccacatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 28181316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 157 - 427
Target Start/End: Original strand, 26848592 - 26848862
Alignment:
Q  157 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    |||| ||||| |||||||| || |||||| ||||||| |||||||  ||||||||||||||||| |||||||| || || ||||| |||||||| || ||    
T  26848592 gtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgct 26848691  T
Q  257 catcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcat 356  Q
    | |||||  ||||||||| || |||||||  |||| ||| || |||   ||||||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  26848692 cctcaagaacattgaagactcgaggatttccattcttgtattctctgagaactatgccacttcttcgttttgtttggacgaacttgtccacatcattcat 26848791  T
Q  357 tgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    |||| ||||  ||||||| || | ||| | |||||||||| |||  | |||||||||||||||||||||||    
T  26848792 tgctccaaggaaaagggtagcatggttattcctgttttctatggcatagaaccttctcatgtgcgacatca 26848862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 81 - 427
Target Start/End: Original strand, 28185222 - 28185568
Alignment:
Q  81 tcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaagg 180  Q
    ||||| |||||||| || ||||||  |||||| ||  | |||||||| || ||||| || | |||||||||  |  |||||||||| |||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  181 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 280  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  |||||||||||||||| |||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28185421  T
Q  281 gatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctc 380  Q
    |||||| ||||| || || |||||||| ||||| |||||||||||||| ||||| |||||||| ||||||||| | |||| ||||  ||  || || ||     
T  28185422 gattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattaactgcttcaaggaaagcgggcgtcta 28185521  T
Q  381 gttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    ||||||||  |||||| || ||||||||||||||| |||||||||||    
T  28185522 gttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 28185568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 156 - 427
Target Start/End: Original strand, 29825958 - 29826229
Alignment:
Q  156 ggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 255  Q
    |||||||| |||||||||||||| ||||| |||||||||  ||| |  ||||||||||||||||| || ||||||||||| || ||||||||||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  256 tcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattca 355  Q
    |  | ||||| ||| |||||||||||||    |||||| | || |||| ||| ||||| |||||||| ||||| || ||||||||||| || ||  || |    
T  29826058 ttgtgaaggcaattcaagaatctaggatagccattcctattttctctaccaattatgcttcttcttcgttttgcttagatgaacttgtgcatatagttga 29826157  T
Q  356 ttgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
     ||   |||||  |||||||| |||||||||||| |||||| || |||||| ||||||||||||||||||||    
T  29826158 gtgtgtcaagaggaagggtcgtctcgttttgcctattttctatgatgtggatccttctcatgtgcgacatca 29826229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 59 - 423
Target Start/End: Complemental strand, 26342290 - 26341920
Alignment:
Q  59 tctcatggctatgc---aatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcac 155  Q
    ||||||||||||||   ||||| | ||||||| ||||||||| || |||  |||||| ||  | |||||||||| |||||||||||||| ||||||  |     
T  26342290 tctcatggctatgctccaatcatcgtcctctttctcttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctat 26342191  T
Q  156 ggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 255  Q
    ||||||||||||||| |||| |  |||||   ||||   ||| |||  |||||||||||||| |  || |||||  |||| ||  ||||||||| |||||    
T  26342190 ggttttactggcaatatctatagagctctatgtgacggtggagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcac 26342091  T
Q  256 tcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattca 355  Q
    |  |||| ||||||||||| || |||||||| |||||  | || || ||||||||||| |||||||| ||||||||||| |||||||| |||||||||||    
T  26342090 ttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattca 26341991  T
Q  356 ttgctacaagacaaag---ggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgac 423  Q
    ||||| |||| |||||   ||||||    ||||||||||||||| ||   |||||||||||||||| ||||    
T  26341990 ttgcttcaaggcaaagaagggtcgcaaaattttgcctgttttctatgacatggaaccttctcatgtacgac 26341920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 59 - 427
Target Start/End: Complemental strand, 28098725 - 28098354
Alignment:
Q  59 tctcatggctatgc---aatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcac 155  Q
    ||||||||||||||   ||||| ||||||||| ||||||||| || |||  |||||| ||  | ||||| || | |||||||||||  ||||||||| |     
T  28098725 tctcatggctatgctccaatcatcttcctctttctcttcattctcttatggattcacctatgacgtgtttcttaattttaggggcaccgacactcggtat 28098626  T
Q  156 ggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 255  Q
    ||||||||||| ||||||||||| ||||||  ||||   ||| |||  |||||||||||  | || ||||||||   ||| |||  |||||||| ||| |    
T  28098625 ggttttactggaaatctctacaaagctctttgtgacggaggagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaatcacacaatccc 28098526  T
Q  256 tcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattca 355  Q
    |  |||||||||| ||||| || |||||||| ||||| || || ||||  |||||||| |||||||  |||||||||||||||||||| |||||||||||    
T  28098525 ttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgtccacatcattca 28098426  T
Q  356 ttgctac-aagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
      | ||| |||| ||||||| || ||||||| ||| |||| | ||  |||||||||||||| |||||||||||    
T  28098425 ccgttacgaaga-aaagggttgcttcgtttttcctattttttgtgacgtggaaccttctcacgtgcgacatca 28098354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 346
Target Start/End: Complemental strand, 25507158 - 25506975
Alignment:
Q  157 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    |||||||| || ||||||||| ||||||   |||||||||||| ||      |||||||||   ||||||  |||||||||||||||||||||||||| |    
T  25507158 gttttactagccatctctacacggctctatatgacaagggaattca------cattgatgattgtgatctgaaaagaggagatgaaatcacaccatcagt 25507065  T
Q  257 catcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttca 346  Q
    | |||  ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||   |||||||||||| |||||||||||    
T  25507064 cgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttgtttggaggaacttgttca 25506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 199 - 396
Target Start/End: Original strand, 28149912 - 28150108
Alignment:
Q  199 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgtt 298  Q
    |||| |||||||||||||| |  || ||| || |||| || |||||||||||||||||| |||||||||||||||| || |||||||| |||||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  299 ttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttct 396  Q
     |||||||||||| | |||||||||||||||||||| |||||||| ||||| ||||| |||| |||| |||||||| || | ||| ||||| ||||||    
T  28150011 ctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaagggttgcttagttctgcctattttct 28150108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 204 - 424
Target Start/End: Original strand, 26937073 - 26937293
Alignment:
Q  204 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttcta 303  Q
    ||||||||||||||||| || || ||  ||||||| |||||||||||||||||  ||||||| |||||||| ||  |||||   || ||||| || ||||    
T  26937073 accttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctcta 26937172  T
Q  304 tcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgt 403  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||| || | |||| ||||||||| ||||  ||  |||||||| |||||| ||  ||    
T  26937173 tcaactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgcctattttctatgaagt 26937272  T
Q  404 ggaaccttctcatgtgcgaca 424  Q
    ||| |||||||| || |||||    
T  26937273 ggatccttctcacgttcgaca 26937293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 204 - 427
Target Start/End: Complemental strand, 28297921 - 28297698
Alignment:
Q  204 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttcta 303  Q
    ||||||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||  |||||||||  |||||||||| |||||||| || ||||    
T  28297921 accttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatcta 28297822  T
Q  304 tcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgt 403  Q
     ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| |||| ||||  ||   | || || ||||||||  |||| | || |||    
T  28297821 ccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagtagccgtctagttttgccgattttttatgatgt 28297722  T
Q  404 ggaaccttctcatgtgcgacatca 427  Q
    ||||||||||||||||||||||||    
T  28297721 ggaaccttctcatgtgcgacatca 28297698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 204 - 427
Target Start/End: Original strand, 28514152 - 28514375
Alignment:
Q  204 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttcta 303  Q
    ||||||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||  |||||||||  |||||||||| |||||||| || ||||    
T  28514152 accttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatcta 28514251  T
Q  304 tcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgt 403  Q
     ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| |||| ||||  ||   | || || ||||||||  |||| | || |||    
T  28514252 ccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagtagccgtctagttttgccgattttttatgatgt 28514351  T
Q  404 ggaaccttctcatgtgcgacatca 427  Q
    ||||||||||||||||||||||||    
T  28514352 ggaaccttctcatgtgcgacatca 28514375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 144 - 426
Target Start/End: Original strand, 27214336 - 27214618
Alignment:
Q  144 gacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 243  Q
    |||||||| |||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||    
T  27214336 gacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaa 27214435  T
Q  244 tcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgt 343  Q
    ||||| | || |||  ||||   |||||||| || ||||||| | ||  ||| || ||    ||||||||  ||||||||||||||||||| ||||||||    
T  27214436 tcacatcttcgctccacaagaaaattgaagactcgaggatttctgttattgtattctcagagaactatgctacttcttcattttgtttggacgaacttgt 27214535  T
Q  344 tcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatc 426  Q
     ||||||| |||||||| ||||  ||| |||||||| ||| | |||||||||| ||| || |||||||||||  |||||||||    
T  27214536 ccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttgaaccttctcacttgcgacatc 27214618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 144 - 426
Target Start/End: Complemental strand, 27234892 - 27234610
Alignment:
Q  144 gacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 243  Q
    |||||||| |||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||    
T  27234892 gacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaa 27234793  T
Q  244 tcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgt 343  Q
    ||||| | || |||  ||||   |||||||| || ||||||| | ||  ||| || ||    ||||||||  ||||||||||||||||||| ||||||||    
T  27234792 tcacatcttcgctccacaagaaaattgaagactcgaggatttctgttattgtattctcagagaactatgctacttcttcattttgtttggacgaacttgt 27234693  T
Q  344 tcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatc 426  Q
     ||||||| |||||||| ||||  ||| |||||||| ||| | |||||||||| ||| || |||||||||||  |||||||||    
T  27234692 ccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttgaaccttctcacttgcgacatc 27234610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 155 - 427
Target Start/End: Original strand, 26949591 - 26949863
Alignment:
Q  155 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 254  Q
    |||||| || || |||||||| || |||||  |||||||||||||||  |||||||||||||| || || ||||| | ||| || ||||||||||| |||    
T  26949591 cggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacaccttca 26949690  T
Q  255 ctcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattc 354  Q
    ||| |||||   ||||||||||| || |||   |||   || |||||||   | ||||| ||||||||||||||||| || |||||||| || |||||||    
T  26949691 ctcctcaagagaattgaagaatcgagaattgccattatcgtcttttctaaggaatatgcttcttcttcattttgtttagacgaacttgtccatatcattc 26949790  T
Q  355 attgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    | | || ||||  ||| |||||||| ||| |||| ||||||| || ||| ||||||||||| |||||||||||    
T  26949791 actacttcaaggaaaaaggtcgccttgttctgccagttttctatgatgtagaaccttctcacgtgcgacatca 26949863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 427
Target Start/End: Original strand, 26811453 - 26811711
Alignment:
Q  169 atctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccat 268  Q
    ||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||||||||| || ||| |||||  |||    
T  26811453 atctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcacaccttcgctcctcaagagcat 26811552  T
Q  269 tgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagaca 368  Q
    |||| | |||||||||   |||  ||| || |||   ||||||||  |||| || |||||||| ||||| ||||| ||||||||| | | || ||||  |    
T  26811553 tgaacactctaggattgccattattgtattctctgagaactatgcaacttcgtcgttttgtttagatgagcttgtccacatcattaactacttcaaggaa 26811652  T
Q  369 aagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    || |||||||| ||| | || ||||||| |||||||||||||||||| |||||||||||    
T  26811653 aaaggtcgccttgttctaccagttttctatggtgtggaaccttctcacgtgcgacatca 26811711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 360
Target Start/End: Complemental strand, 27665358 - 27665169
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 270  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||||||||| || |||| ||  || || ||||||||||| ||||||   |||  |||||    
T  27665358 ctctataaggctctttctgacaaaggaatccacaccttcattgatgacaaggagcttccaactggtgacgaaatcacaccttcactccggaagagcattg 27665259  T
Q  271 aagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgct 360  Q
    ||||||| ||||||   |||  | | || ||||  ||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||    
T  27665258 aagaatcgaggattgccattattatattctctaagaactatgctacttcttcattttgtttagatgaacttgtccacatcattcattgct 27665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 422
Target Start/End: Original strand, 26635636 - 26635887
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 270  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||| |||||  |||||    
T  26635636 ctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattg 26635735  T
Q  271 aagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaa 370  Q
    |||| || ||||||   |||   || || ||||   | ||||| |||||||  |||||||||||||||||||| |||||||||||||||| |||   |||    
T  26635736 aagagtcgaggattgccattatcgttttctctaaggaatatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgctccaatgaaaa 26635835  T
Q  371 gggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcga 422  Q
    |||| ||   ||| | |||||||||| |||    ||||||||||||||||||    
T  26635836 gggtagcaaggttattcctgttttctatggcaccgaaccttctcatgtgcga 26635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 422
Target Start/End: Original strand, 26741602 - 26741853
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 270  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||| |||||  |||||    
T  26741602 ctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattg 26741701  T
Q  271 aagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaa 370  Q
    |||| || ||||||   |||   || || ||||   | ||||| |||||||  |||||||||||||||||||| |||||||||||||||| |||   |||    
T  26741702 aagagtcgaggattgccattatcgttttctctaaggaatatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgctccaatgaaaa 26741801  T
Q  371 gggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcga 422  Q
    |||| ||   ||| | |||||||||| |||    ||||||||||||||||||    
T  26741802 gggtagcaaggttattcctgttttctatggcaccgaaccttctcatgtgcga 26741853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 421
Target Start/End: Original strand, 26974998 - 26975248
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 270  Q
    ||||| || |||||| ||||||| |||||| | | ||||||||||||||| || ||| ||| ||| || ||||||||||| || ||| |||||  |||||    
T  26974998 ctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagcttaaaaaaggggacgaaatcacaccttcgctcctcaagagcattg 26975097  T
Q  271 aagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaa 370  Q
    |||| || ||||||   |||   || || ||||   ||||||| |||||||||||||||||||| |||||||| |||||||||||||| | |||   |||    
T  26975098 aagactcgaggattaccattatcgtcttctctaaagactatgcttcttcttcattttgtttggacgaacttgtccacatcattcattgttccaatgaaaa 26975197  T
Q  371 gggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcg 421  Q
    |||| || | ||| | |||||||||| |||    |||||||||||||||||    
T  26975198 gggtagcatagttattcctgttttctatggcacagaaccttctcatgtgcg 26975248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 396
Target Start/End: Original strand, 2184117 - 2184459
Alignment:
Q  57 attctcatggctatgc---aatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggc 153  Q
    ||||||||||||||||   ||||| ||||||| || |||||||  ||||  | |||||| ||  | |||||||| ||||| || ||   ||||||||| |    
T  2184117 attctcatggctatgccacaatcatcttcctcctcttcttcatcctcctccaaattcacctataacgtgttcctaagtttcagaggagctgacactcgcc 2184216  T
Q  154 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 253  Q
    | |||||||| |||||||| ||| | |||||   | | |  ||| |||| || ||||  |||||| | || |||||| |||| | |||||| ||| ||||    
T  2184217 atggttttaccggcaatctttacgatgctctatgtaaaagtggagtccacactttcaaggatgacgaggagcttcaacgagggggtgaaataacagcatc 2184316  T
Q  254 actcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcatt 353  Q
    ||| || || ||||||||||| || || ||||| || ||||| || || |  |||||||| |||||||||||||||||||| |||||||| |||||||||    
T  2184317 acttatgaaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcattttgtttggacgaacttgtccacatcatt 2184416  T
Q  354 cattgctacaagacaaagggtcgcctcgttttgcctgttttct 396  Q
    | || || |||| ||||||| ||||| ||| | || |||||||    
T  2184417 cgttactccaagtcaaagggacgcctggttctaccagttttct 2184459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 25538356 - 25538431
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25538356 tcattcatattctccattttcaaagtcttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 396
Target Start/End: Original strand, 2184880 - 2185069
Alignment:
Q  207 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatca 306  Q
    ||||| |||||| | || |||||| |||| | |||||| |||||||| ||  | || |||||||||||||| || ||||| || ||||| || || |       
T  2184880 ttcatggatgacgaagagcttcaacgagggggtgaaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccctgttttctcaaagg 2184979  T
Q  307 actatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttct 396  Q
    ||||||| |||||||||||||||||||| |||||||| || ||||||| ||||| |||| ||||||| ||||  ||| |||| |||||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct 2185069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 26055742 - 26055818
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcct 84  Q
    ||||||||||||| ||||  || | ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  26055742 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcct 26055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 25481558 - 25481633
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25481558 tcattcatattctccattttcaaagttttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26048661 - 26048736
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  26048661 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26069830 - 26069905
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  26069830 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26075712 - 26075787
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  26075712 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26142681 - 26142756
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  26142681 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 340
Target Start/End: Complemental strand, 26893688 - 26893543
Alignment:
Q  195 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctg 294  Q
    ||||| || |||||||||||||| |  || ||||| ||||| || |||||| |||||||||| |||||||| |||||||| |||| ||| |  ||||| |    
T  26893688 ggaattcacaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccag 26893589  T
Q  295 tgttttctatcaactatgcctcttcttcattttgtttggatgaact 340  Q
    |  | |||||||||||||| ||||||  |||||||||||| |||||    
T  26893588 tcctctctatcaactatgcttcttctatattttgtttggaagaact 26893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 355
Target Start/End: Original strand, 25071589 - 25071789
Alignment:
Q  155 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 254  Q
    ||||||||| || ||||| || || |||||| ||||||| |||||||| ||||| ||||||||||| || ||| | ||||| || ||||||||||| ||     
T  25071589 cggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgacaaagagcttaagagaggtgacgaaatcacaccttcg 25071688  T
Q  255 ctcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattc 354  Q
    |||  ||||  ||||||||| || || |||   |||   || || ||||   ||||||| ||||||||||||||||| || |||||||| ||||||||||    
T  25071689 ctccgcaagagcattgaagattcgagaattgccattatcgtcttctctaaagactatgcttcttcttcattttgtttagacgaacttgtccacatcattc 25071788  T
Q  355 a 355  Q
    |    
T  25071789 a 25071789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 25579566 - 25579610
Alignment:
Q  39 ttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  25579566 ttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25579610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 357
Target Start/End: Original strand, 26959111 - 26959298
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc-aaggccatt 269  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||  || |||  ||||    
T  26959111 ctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaatcacaccttcgcttctcaaagagcatt 26959210  T
Q  270 gaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcatt 357  Q
    ||||| || ||||||   |||   || || ||||   | ||||| |||||||| |||| ||||||||||||||| |||||||||||||    
T  26959211 gaagactcgaggattgccattatcgttttctctaaggaatatgcttcttcttcgttttatttggatgaacttgtccacatcattcatt 26959298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 26617266 - 26617351
Alignment:
Q  165 ggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 250  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26617266 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 26723194 - 26723279
Alignment:
Q  165 ggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 250  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26723194 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 28491744 - 28491660
Alignment:
Q  188 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 272  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  28491744 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 28491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 29804154 - 29804070
Alignment:
Q  188 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 272  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  29804154 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 29804070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 422
Target Start/End: Original strand, 24715667 - 24715782
Alignment:
Q  307 actatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtgga 406  Q
    ||||||| ||||||||||||||||| |  ||||||   |||||||| ||||||| ||| |  |||||| || | ||| | |||||||||| |||   |||    
T  24715667 actatgcttcttcttcattttgtttaggcgaactttcccacatcatccattgcttcaataacaagggtggcatggttattcctgttttctatggcacgga 24715766  T
Q  407 accttctcatgtgcga 422  Q
    ||||||||||||||||    
T  24715767 accttctcatgtgcga 24715782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 29467797 - 29467876
Alignment:
Q  195 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||||| || |||||||| |||||  | || ||||||| ||| || ||||||||||||||||||||||| || ||||||||    
T  29467797 ggaattcacaccttcatggatgatgaagaacttcaaaaaggcgaagaaatcacaccatcactcatcaaagctattgaaga 29467876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 26018836 - 26018770
Alignment:
Q  63 atggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctca 129  Q
    |||||||| ||||||||||| ||| |||| || |||||||||  | |||| ||||||||||||||||    
T  26018836 atggctattcaatcaccttcgtctacctcatccttttcctatggactcacataccaagtgttcctca 26018770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 26139540 - 26139474
Alignment:
Q  63 atggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctca 129  Q
    |||| ||| ||||||||||||||| |||| || |||||||||  | |||| ||||||||||||||||    
T  26139540 atggttattcaatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctca 26139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 26617401 - 26617437
Alignment:
Q  307 actatgcctcttcttcattttgtttggatgaacttgt 343  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  26617401 actatgcttcttcttcattttgtttagatgaacttgt 26617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 26723329 - 26723365
Alignment:
Q  307 actatgcctcttcttcattttgtttggatgaacttgt 343  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  26723329 actatgcttcttcttcattttgtttagatgaacttgt 26723365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 314; Significance: 1e-177; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 8 - 429
Target Start/End: Complemental strand, 14036 - 13615
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    |||||||||||||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| | ||    
T  14036 tcattcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgca 13937  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||    
T  13936 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaacct 13837  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaa 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13836 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaa 13737  T
Q  308 ctatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaa 407  Q
    ||| ||| ||||   |||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  13736 ctacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggat 13637  T
Q  408 ccttctcatgtgcgacatcata 429  Q
    ||| || |||||||||||||||    
T  13636 cctactaatgtgcgacatcata 13615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 10 - 426
Target Start/End: Complemental strand, 5073 - 4657
Alignment:
Q  10 attcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacatt 109  Q
    |||||||||||| |||| || |||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||  |||    
T  5073 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 4974  T
Q  110 cacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttc 209  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||    
T  4973 cacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 4874  T
Q  210 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaact 309  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||||||||||||  ||    
T  4873 attgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatcttct 4774  T
Q  310 atgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaacc 409  Q
    |||||| |||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  4773 atgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacc 4674  T
Q  410 ttctcatgtgcgacatc 426  Q
    | || | ||||||||||    
T  4673 tactaacgtgcgacatc 4657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 295; Significance: 1e-165; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 31 - 429
Target Start/End: Original strand, 7331 - 7729
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||    
T  7331 actcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttag 7430  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  7431 ttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaa 7530  T
Q  231 agaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtt 330  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||   |||||| |    
T  7531 agaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgct 7630  T
Q  331 tggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatcata 429  Q
    |||| |||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  7631 tggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcgacatcata 7729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 253; Significance: 1e-140; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 12 - 396
Target Start/End: Complemental strand, 18699787 - 18699403
Alignment:
Q  12 tcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattca 111  Q
    ||||||||||||||| || |||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||    
T  18699787 tcatattctgcattctcaaactcttttttcatctagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 18699688  T
Q  112 cttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  18699687 cttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcat 18699588  T
Q  212 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactat 311  Q
    |||||||  ||| || ||||| || |||||||||| ||||||||||  ||| ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  18699587 tgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactat 18699488  T
Q  312 gcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttct 396  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  18699487 gcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgttttgcctgttttct 18699403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 12 - 406
Target Start/End: Complemental strand, 18731891 - 18731497
Alignment:
Q  12 tcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattca 111  Q
    ||||||||||||||| || |||||||||||||||| ||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||||  |||||    
T  18731891 tcatattctgcattctcaaactcttttttcatccagtttctctcgattttcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 18731792  T
Q  112 cttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||||    
T  18731791 cttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacaccttcat 18731692  T
Q  212 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactat 311  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  18731691 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactat 18731592  T
Q  312 gcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtgga 406  Q
    ||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||| || |||||||||||||||| ||| |||||    
T  18731591 gcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgga 18731497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 12 - 396
Target Start/End: Complemental strand, 18679954 - 18679570
Alignment:
Q  12 tcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattca 111  Q
    ||||||||||||||| || |||||||||||||||| ||||| || ||| ||||||||||||||||||||||||| | ||||||||||||||||  |||||    
T  18679954 tcatattctgcattctcaaactcttttttcatccagtttctctctattttcatggctatgcaatcaccttcctcattctcttcattttcctatcgattca 18679855  T
Q  112 cttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||||    
T  18679854 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcat 18679755  T
Q  212 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactat 311  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  18679754 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactat 18679655  T
Q  312 gcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttct 396  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  18679654 gcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtcttgttttgcctgttttct 18679570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 12 - 415
Target Start/End: Complemental strand, 18655864 - 18655461
Alignment:
Q  12 tcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattca 111  Q
    ||||||||||||||| || |||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||||  |||||    
T  18655864 tcatattctgcattctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattca 18655765  T
Q  112 cttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||    
T  18655764 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacaccttcat 18655665  T
Q  212 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactat 311  Q
    |||||||  ||| || ||||| || |||||||||| ||||||||||  ||| |||||| |||| |||||||| |||||||||||||||||||||||||||    
T  18655664 tgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactat 18655565  T
Q  312 gcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaacctt 411  Q
    ||||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||| |||||||| |||||||||| ||| ||||| |||     
T  18655564 gcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgtttttcctgttttctatggcgtggatccta 18655465  T
Q  412 ctca 415  Q
    ||||    
T  18655464 ctca 18655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 54 - 406
Target Start/End: Complemental strand, 18724430 - 18724078
Alignment:
Q  54 tcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggc 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| || ||||||| |||||||||      
T  18724430 tcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgta 18724331  T
Q  154 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 253  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||    
T  18724330 acggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatc 18724231  T
Q  254 actcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcatt 353  Q
    ||||  ||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||     
T  18724230 actcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatg 18724131  T
Q  354 cattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtgga 406  Q
    || |||||||||||||||||||| || |||||||||||||||| ||| |||||    
T  18724130 cactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgga 18724078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 429
Target Start/End: Original strand, 18073550 - 18073966
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||| |  ||||  |||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||    
T  18073550 tcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgca 18073647  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||| |||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||||||||| | |||||    
T  18073648 ttcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacct 18073747  T
Q  208 tcattgatgacaatga------tcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttc 301  Q
    ||  ||||||| ||||      |||||||||| ||||  || ||||||||    |||| |      |||||||||| |||||||| |||||  | |||||    
T  18073748 tccatgatgacgatgacagtgatcttcaaagaagagacaaagtcacaccaa---tcatta------ttgaagaatccaggattttgattcccatattttc 18073838  T
Q  302 tatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggt 401  Q
    |  ||||||||| |||||||||| |||||||||   |||||| ||||||||||| |||||||| || |||||| ||||||||||||||||||||||||||    
T  18073839 tgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggt 18073938  T
Q  402 gtggaaccttctcatgtgcgacatcata 429  Q
    ||||||||| || |||||||||||||||    
T  18073939 gtggaacctactgatgtgcgacatcata 18073966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 429
Target Start/End: Complemental strand, 17989439 - 17989026
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||| |  ||||  |||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||    
T  17989439 tcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgca 17989342  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||| |||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||||||||| | |||||    
T  17989341 ttcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacct 17989242  T
Q  208 tcatt------gatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttc 301  Q
    ||  |      ||||||| ||||||||||||| ||||  || ||||||||      ||||     ||||||||||| |||||||| |||||  | |||||    
T  17989241 tccatgatgacgatgacagtgatcttcaaagaagagacaaagtcacacca------atca---ttattgaagaatccaggattttgattcccatattttc 17989151  T
Q  302 tatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcc-tgttttctttgg 400  Q
    |  ||||||||| |||||||||| |||||||||   |||||| ||||||||||| ||||||||  |  |||||  |||||||||||| ||||||||||||    
T  17989150 tgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaacc--agggt-tcctcgttttgccttgttttctttgg 17989054  T
Q  401 tgtggaaccttctcatgtgcgacatcata 429  Q
    ||||||||| ||| |||||||||||||||    
T  17989053 tgtggaacc-tctgatgtgcgacatcata 17989026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 129 - 427
Target Start/End: Complemental strand, 5091237 - 5090939
Alignment:
Q  129 agttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 228  Q
    |||||||| ||||  ||||||||  ||||||||||||| ||||||||  | |||||   || ||||||||| || ||||||||||||||||  || ||||    
T  5091237 agttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttc 5091138  T
Q  229 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttg 328  Q
    |  |||||||  |||| ||||| |||||  ||||||||||| ||||||||| |||| | |||   || || |||| | ||||||| |||||||| |||||    
T  5091137 agcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccactatgcttcttcttcgttttg 5091038  T
Q  329 tttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    ||| ||||||||||| || || ||||| |||| ||||  ||| ||| |||| ||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  5091037 tttagatgaacttgtccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtggaaccttctcatgtgcgatatca 5090939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 31 - 319
Target Start/End: Complemental strand, 298 - 10
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||    
T  298 actcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttag 199  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  198 ttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaa 99  T
Q  231 agaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttc 319  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  98 agaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 26 - 429
Target Start/End: Complemental strand, 28164735 - 28164333
Alignment:
Q  26 cccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttc 125  Q
    |||| |||||||| ||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||| ||||||||  |||||| ||||||||||||    
T  28164735 cccaaactcttttctcatccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttc 28164636  T
Q  126 ctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatc 225  Q
    |||||||||||||||| |||||||||  ||||||| |||||| ||||||| ||||| |||   ||||||||||| || || |||||||||||   |||||    
T  28164635 ctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatc 28164536  T
Q  226 ttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcatt 325  Q
    || | |||||||| ||||||||||| ||| ||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||    
T  28164535 ttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcatt 28164436  T
Q  326 ttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacat 425  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||| || |||||||||||    
T  28164435 ttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttc-ttggcgtggatcctactgatgtgcgacat 28164337  T
Q  426 cata 429  Q
    ||||    
T  28164336 cata 28164333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 31 - 429
Target Start/End: Complemental strand, 28128042 - 28127649
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||      | ||||||||  |||||| |||||||||||||||||    
T  28128042 actcttttctcatccaatttttgtcaattctcatggctatgcaatcacattcctcttc------aatttcctatggattcacataccaagtgttcctcag 28127949  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
     || ||||||| |||||||||  ||||||| |||||| ||||||||||||| |||  ||||||||||||||| || |||||||||||   | ||||| |     
T  28127948 cttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgag 28127849  T
Q  231 agaggag-atgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgt 329  Q
    ||||||| |  |||||||||| |||||  | |||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  28127848 agaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgt 28127749  T
Q  330 ttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatcata 429  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || |||||||| ||||||    
T  28127748 ttggacgaacttgtgcacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttctttggcgtggatcctactgatgtgcgatatcata 28127649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 46 - 415
Target Start/End: Complemental strand, 268711 - 268341
Alignment:
Q  46 aatttctt-tcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattg 144  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||| | || |||  |||  | ||||| || |||||||  || || |||  ||    
T  268711 aatttcttctcagttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtg 268612  T
Q  145 acactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaat 244  Q
    |||||||  | ||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| ||||||||    
T  268611 acactcgtgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaat 268512  T
Q  245 cacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgtt 344  Q
    || ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  268511 caaaccatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtc 268412  T
Q  345 cacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    ||||||||||| |||||||||| ||||||||| ||| ||||||| || |||| ||| ||||| ||| ||||    
T  268411 cacatcattcactgctacaagaaaaagggtcgtctcattttgcccgtcttctatggcgtggatcctactca 268341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 59 - 415
Target Start/End: Complemental strand, 29274123 - 29273767
Alignment:
Q  59 tctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggt 158  Q
    ||||||||||||||||||||||||||||||||||||| | || |||  |||||||||||| || |||||||  ||||| |||  |||||||||  |||||    
T  29274123 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 29274024  T
Q  159 tttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactca 258  Q
    |||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||     
T  29274023 tttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcg 29273924  T
Q  259 tcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattg 358  Q
     ||| | ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||    
T  29273923 acaatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 29273824  T
Q  359 ctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctca 415  Q
    |||||||||||||||||| ||| |||||||||| |||| ||| ||||| ||| ||||    
T  29273823 ctacaagacaaagggtcgtctcattttgcctgtcttctatggcgtggatcctactca 29273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 107 - 343
Target Start/End: Original strand, 31903733 - 31903969
Alignment:
Q  107 attcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacc 206  Q
    |||||| ||| | ||||||||||| ||||| ||| | ||||||||  | ||||||||||| ||||||||||| ||||||  ||| ||||||||||| |||    
T  31903733 attcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacc 31903832  T
Q  207 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatca 306  Q
    || ||||| ||  | || |||||||||||| |||||||||||||||||||  |  |||| |||||||| |||||||||   |||  |||| | ||||  |    
T  31903833 tttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcacttttagaggcaattgaagagtctaggattgccattattgtgctctctaaaa 31903932  T
Q  307 actatgcctcttcttcattttgtttggatgaacttgt 343  Q
    ||||||| |||||||||||||| ||  ||||||||||    
T  31903933 actatgcttcttcttcattttgcttacatgaacttgt 31903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 340
Target Start/End: Complemental strand, 16373305 - 16373134
Alignment:
Q  169 atctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccat 268  Q
    |||| ||||| ||||| |||||||| || |||| |||||||||| ||||    || ||||||| ||||||||| ||||| ||||| ||  | ||||| ||    
T  16373305 atctgtacaaagctctgactgacaaagggatccgtaccttcattcatgattcggagcttcaaataggagatgagatcactccatcgctttttaaggcaat 16373206  T
Q  269 tgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaact 340  Q
     ||||| |||||||||| |||   | | |||||||  |||||||||||||||   ||||| |||||||||||    
T  16373205 cgaagagtctaggatttgtataattatattttctacgaactatgcctcttctagcttttgcttggatgaact 16373134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 429
Target Start/End: Original strand, 59358 - 59774
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||| |  ||||  |||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||    
T  59358 tcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgca 59455  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||| |||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||||||||| | |||||    
T  59456 ttcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacct 59555  T
Q  208 tcattgatgacaatga------tcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttc 301  Q
    ||  ||||||| ||||      |||||||||| ||||  || ||||||||    |||| |      |||||||||| |||||||| |||||  | |||||    
T  59556 tccatgatgacgatgacagtgatcttcaaagaagagacaaagtcacaccaa---tcatta------ttgaagaatccaggattttgattcccatattttc 59646  T
Q  302 tatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggt 401  Q
    |  ||||||||| |||||||||| |||||||||   |||||| ||||||||||| |||||||| || |||||| ||||||||||||||||||||||||||    
T  59647 tgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggt 59746  T
Q  402 gtggaaccttctcatgtgcgacatcata 429  Q
    ||||||||| || |||||||||||||||    
T  59747 gtggaacctactgatgtgcgacatcata 59774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 120; Significance: 3e-61; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 120 - 427
Target Start/End: Original strand, 34620 - 34927
Alignment:
Q  120 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| |||||||| || | |||||||||  | |||||||| |  |||||||| |  ||||||  | ||||||||||||| ||||||||||||||||    
T  34620 gtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgaca 34719  T
Q  220 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttc 319  Q
      || |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||||||||| |||||||| || |||||||| ||||| |||||    
T  34720 gggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttc 34819  T
Q  320 ttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtg 419  Q
    ||||||||| ||||| |||||||| ||||||||||| |||| ||||  ||  || || || ||||||||  |||||| || ||||||||||||||| |||    
T  34820 ttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtggaaccttctcacgtg 34919  T
Q  420 cgacatca 427  Q
    ||||||||    
T  34920 cgacatca 34927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 120 - 427
Target Start/End: Original strand, 27343 - 27650
Alignment:
Q  120 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| |||||||| || |||||||||||  | ||||||||||| ||||||||||  | ||||  | | |||||||| || || ||| ||||||| |    
T  27343 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 27442  T
Q  220 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttc 319  Q
      || |||||| |||| |||||||| ||| |||||||  |||||| ||||||||||||||||||||| |||||||| || |||||||| ||||| |||||    
T  27443 gagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttc 27542  T
Q  320 ttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtg 419  Q
    ||||||||| ||||| |||||||| |||||||||||||||| ||||  |||  | ||||| ||||||||  |||||| || |||||||||||||||||||    
T  27543 ttcattttgcttggacgaacttgtccacatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatgatgtggaaccttctcatgtg 27642  T
Q  420 cgacatca 427  Q
    ||||||||    
T  27643 cgacatca 27650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 123 - 427
Target Start/End: Original strand, 42864 - 43168
Alignment:
Q  123 ttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    ||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  223 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttc 322  Q
    | |||| | |||| ||  |||| |||||||||||  |||||||||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 43063  T
Q  323 attttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcga 422  Q
    |||||| ||||| |||||||| ||||||||||| |||| ||||| ||| || ||||| ||||||||  |||||| || ||||||||||||| | ||| ||    
T  43064 attttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaaccttctaacgtgaga 43163  T
Q  423 catca 427  Q
    |||||    
T  43164 catca 43168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 87 - 427
Target Start/End: Original strand, 116658 - 116998
Alignment:
Q  87 tcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 186  Q
    |||||||| |||||||||  |||||| ||  | |||||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  187 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttt 286  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  |||||||||||||||| |||||||||||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 116857  T
Q  287 tattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttg 386  Q
     |||||| | || |||||||| ||||| |||||||| ||||| |||||||||||||| ||||| ||||| |||| |||   ||| || ||||| |||| |    
T  116858 cattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgcttcaaagaaaatgggcgcctagtttag 116957  T
Q  387 cctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    || |||||||  | ||||||||||||||| |||||||||||    
T  116958 ccagttttctacgatgtggaaccttctcacgtgcgacatca 116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 87 - 427
Target Start/End: Complemental strand, 58607 - 58267
Alignment:
Q  87 tcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 186  Q
    |||||||| || ||||||  |||||| || || |||||||| || ||||| ||   |||||||||  | ||||||||||| ||||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  187 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttt 286  Q
     ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| |||||||||||  ||||||||||| |||| |||||||||||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T
Q  287 tattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgctacaagacaaagggtcgcctcgttttg 386  Q
     ||||| || || |||||||||||||| |||||||||||||| ||| | |||||||| ||||||||||| |||| | ||  | | || ||||| ||||||    
T  58407 cattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgcttcgaggaatatgggcgcctagttttg 58308  T
Q  387 cctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    ||  |||||| ||  |||||||||||||| |||||||||||    
T  58307 ccaattttctatgacgtggaaccttctcacgtgcgacatca 58267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 427
Target Start/End: Original strand, 16688944 - 16689213
Alignment:
Q  158 ttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 257  Q
    ||||||||| ||||| ||||| |||||   |||||||||||||| |  ||||||||||||||| || ||||| ||||| ||  ||||||||||||||||     
T  16688944 ttttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcactt 16689043  T
Q  258 atcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcatt 357  Q
    |||||||| |||||||| || ||||||   || || ||||||||||  |||||||| | ||| || ||||||||||||||||||||  |||||||| ||     
T  16689044 atcaaggcaattgaagactcaaggattgcaatccccgtgttttctaagaactatgcattttcctcgttttgtttggatgaacttgtcaacatcattgatg 16689143  T
Q  358 gctacaagacaaagggtcgcctcgttttgcctgttttctttggtgtggaaccttctcatgtgcgacatca 427  Q
    ||| ||   |||| ||||| || |||||||||||||||| ||  ||||| ||||| |||||| |||||||    
T  16689144 gcttcagtgcaaaaggtcggctagttttgcctgttttctatgacgtggatccttcgcatgtgagacatca 16689213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 360
Target Start/End: Original strand, 3279592 - 3279823
Alignment:
Q  129 agttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 228  Q
    ||||||||||||| |||||||||  | ||||||||||| |||||||| |  ||| | | ||||   ||| ||   |||||||||||||| |  || ||||    
T  3279592 agttttaggggcactgacactcgctatggttttactggaaatctctatagagctttaagtgacggtggattctgcaccttcattgatgatagggagcttc 3279691  T
Q  229 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttg 328  Q
    |  |||| ||||||||||||| ||||||  |||||||||| ||||| || | |||||||||||| || || |||||||||||||| ||||||  ||||||    
T  3279692 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 3279791  T
Q  329 tttggatgaacttgttcacatcattcattgct 360  Q
    |||||| |||||||| ||||||||||||||||    
T  3279792 tttggacgaacttgtccacatcattcattgct 3279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 168 - 360
Target Start/End: Complemental strand, 17993928 - 17993736
Alignment:
Q  168 aatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggcca 267  Q
    |||||||| || |||||| ||||||||||||| |  |||||||| |||||||| || ||||| ||||| |||||||||||||| || ||| |||||  ||    
T  17993928 aatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatcacaccgtcgctcctcaagagca 17993829  T
Q  268 ttgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggatgaacttgttcacatcattcattgct 360  Q
    ||||||| || || |||   |||   || || || |   ||||||| ||||||||||||||||| || |||||||| ||||||||||| ||||    
T  17993828 ttgaagactcaagaattgcgattatcgtcttctcaaaggactatgcttcttcttcattttgtttagacgaacttgtccacatcattcaatgct 17993736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 343
Target Start/End: Original strand, 17711967 - 17712084
Alignment:
Q  226 ttcaaagaggagatgaaatcacaccatcact-catcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 324  Q
    |||||| |||||| || |||||||||||||| | ||||| | ||| || ||||||||||||| |||  ||| || |||| ||||||||| || ||| | |    
T  17711967 ttcaaaaaggagaagagatcacaccatcacttcttcaag-ctattcaacaatctaggattttcattgttgttttctctaacaactatgcttcctctactt 17712065  T
Q  325 tttgtttggatgaacttgt 343  Q
    |||||||| ||||||||||    
T  17712066 tttgtttgaatgaacttgt 17712084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 5916 - 5982
Alignment:
Q  63 atggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctca 129  Q
    |||| ||| ||||||||||||||| |||| || |||||||||  | |||| ||||||||||||||||    
T  5916 atggttattcaatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctca 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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