View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3876_high_17 (Length: 205)
Name: NF3876_high_17
Description: NF3876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3876_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 14 - 189
Target Start/End: Complemental strand, 10013427 - 10013252
Alignment:
| Q |
14 |
agaagaacttataatggttgttgaggatatatatgatgttagtgctagtcctttcatttgttaaaatcagacatacactttggtctgtgctttaacagac |
113 |
Q |
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| T |
10013427 |
agaagaacttataatggttgttgaggatatatatgatgttagtgctagtcctttcatttgttaaaatcggacatacactttggtctgtgctttaacagac |
10013328 |
T |
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| Q |
114 |
aaatgatgataaagtgaaaaaagtactatgttttttgtagaacagcatacattgctttccacaacacagaagcatt |
189 |
Q |
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| T |
10013327 |
aaatgatggtaaagtgaaaaaagtactatgttttttgtagaacagcatacattgctttccacaacacagaagcatt |
10013252 |
T |
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