View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3878_high_30 (Length: 222)
Name: NF3878_high_30
Description: NF3878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3878_high_30 |
 | |
|
| [»] chr3 (17 HSPs) |
| |
|
| [»] chr6 (8 HSPs) |
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| [»] chr5 (4 HSPs) |
| |
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| [»] chr4 (10 HSPs) |
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| [»] chr2 (9 HSPs) |
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| [»] chr7 (10 HSPs) |
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| [»] scaffold0525 (2 HSPs) |
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| [»] chr8 (10 HSPs) |
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| [»] chr1 (7 HSPs) |
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| [»] scaffold0395 (1 HSPs) |
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| [»] scaffold0109 (1 HSPs) |
| | |
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| [»] scaffold0023 (1 HSPs) |
| | |
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| [»] scaffold0586 (1 HSPs) |
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| [»] scaffold0003 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 10554349 - 10554562
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
10554349 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatccataa |
10554448 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10554449 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaacaagtaggact |
10554548 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
10554549 |
catatcaacatctt |
10554562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 55292611 - 55292398
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
55292611 |
acatcaacaacctatgactccgttacttggaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
55292512 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
55292511 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaacaagtaggact |
55292412 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
55292411 |
catatcaacatctt |
55292398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 54973299 - 54973513
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
54973299 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
54973398 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
54973399 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
54973498 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
54973499 |
tcatatcaacatctt |
54973513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 54975909 - 54976123
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
54975909 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
54976008 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
54976009 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
54976108 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
54976109 |
tcatatcaacatctt |
54976123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 54978519 - 54978733
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
54978519 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
54978618 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
54978619 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
54978718 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
54978719 |
tcatatcaacatctt |
54978733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 16799736 - 16799876
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
16799736 |
acatcaacaacctatgactccgttacttagaacgtcaacttgcaaccttacaacctgaatcaacatcttgtataatcccatggaatgcatttatgcataa |
16799835 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| ||||| |
|
|
| T |
16799836 |
accaacaatcaacatcaaatcatattcaatcaacaacaaca |
16799876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 54046644 - 54046782
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||| ||||| ||||||| ||| | ||| |||||||| || ||||||||||| ||| |||||| |
|
|
| T |
54046644 |
acatcaacaaactatgactccgttacttagaacgacaactcgcaac-ttacaactcgaaccaacaccttgtatattctaattgaatgcagttaagcataa |
54046742 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||||||||| || | ||||||| |||||||||| ||||| |
|
|
| T |
54046743 |
accaacaatcatcaac-aatcataatcaatcaacaacaaca |
54046782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 603836 - 603698
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||| |||||||| ||| | ||| ||| |||| || ||||||||||| ||| |||||| |
|
|
| T |
603836 |
acatcaacaacctatgactccgttacttagaacgacaactcgcaa-cttacaactcgaaccaacaccttatatattctaattgaatgcagttaagcataa |
603738 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||| |||||| || | ||||||| |||||||||||||||| |
|
|
| T |
603737 |
acctgcaatcatcaac-aatcataatcaatcaacagcaaca |
603698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 15010346 - 15010208
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||| |||||||| ||| | ||| |||||||| || ||||||||||| ||| |||||| |
|
|
| T |
15010346 |
acatcaacaacctatgactccgttacttagaacgacaactctcaa-cttacaactcgaaccaacaccttgtatattctaattgaatgcagttaagcataa |
15010248 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| |||||| || | ||||||| |||||||||| ||||| |
|
|
| T |
15010247 |
accatcaatcatcaac-aatcataatcaatcaacaacaaca |
15010208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 10989762 - 10989622
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac-cttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||| |||| |||||| ||||||| ||| | ||| ||||| || || ||| ||||||| ||| |||| |
|
|
| T |
10989762 |
acatcaacaacctatgactcctttacttagaacgacaacttgcaacttttacaactcgaacctacaccttgtgtattctaatggaatgcagttaaacata |
10989663 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|| |||||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
10989662 |
aatcaacaatcagcaac-aatcatactcaatcaacagcaaca |
10989622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 2035174 - 2035036
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
2035174 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
2035076 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
2035075 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
2035036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 2038681 - 2038543
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
2038681 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
2038583 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
2038582 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
2038543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 2042422 - 2042284
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
2042422 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
2042324 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
2042323 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
2042284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 14038106 - 14038244
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
14038106 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
14038204 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
14038205 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
14038244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 14041574 - 14041712
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
14041574 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
14041672 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
14041673 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
14041712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 39230654 - 39230692
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaac |
47 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
39230654 |
acatcaacaacctatgactccgttacttagaacgacaac |
39230692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 18958825 - 18958963
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| |||||||| ||| |||||||||||||| |||| || | |||||||| ||| | |||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
18958825 |
acatcaacaacctataactacgttacttagaacgacaactcgcca-cttacaactcgaaccaacatattgtacattctaattgaatgcaattaagtataa |
18958923 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||| | |||| || | ||||||| |||||||||||||||| |
|
|
| T |
18958924 |
tccagcgatcatcaac-aatcataatcaatcaacagcaaca |
18958963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 8522845 - 8523059
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
8522845 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
8522944 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
8522945 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
8523044 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
8523045 |
tcatatcaacatctt |
8523059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 15686302 - 15686094
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||| | | | |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15686302 |
acatcaacaacctaggactccgttacttagaacgacaacttgcaaccttacaaccggcaccaacatcttgtataatccaattgaatgcgtttatgcataa |
15686203 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| |
|
|
| T |
15686202 |
accaacaatcagcagcaa-----attcaatcaacagcaacatataataataagcagcgagacaacagcaataataaccatcatatacaacaagtaggact |
15686108 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
15686107 |
catatcaacatctt |
15686094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 2288099 - 2287966
Alignment:
| Q |
16 |
caacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataaaccaaca |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||| |
|
|
| T |
2288099 |
caacctatgactccgttacttagaacgtcaacttgcaaccttacaacctgaatcaacatcttgtataatcccatggaatgcatttatgcataaaccaaca |
2288000 |
T |
|
| Q |
116 |
atcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
2287999 |
atcagcatcaaatcatattcaatcaacagcaaca |
2287966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 15539200 - 15539340
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
15539200 |
acatcaacaacctatgactctgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatcccatggaatgcatttatgcataa |
15539299 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15539300 |
actaacaatcagcatcaaatcatattcaatcaacagcaaca |
15539340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 16812707 - 16812845
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||| |||| ||| ||||||||| ||| | ||| |||||||| || |||||||| || ||| | |||| |
|
|
| T |
16812707 |
acatcaacaacctatgactccgttacttataacgacaactcacaa-cttacaacccgaaccaacaccttgtatattctaattgaatacagttaagtataa |
16812805 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||||| ||| || | ||||||| |||||||||| ||||| |
|
|
| T |
16812806 |
accaacattcatcaac-aatcataatcaatcaacaacaaca |
16812845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 16829727 - 16829865
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||| |||||||| |||| |||| ||| ||||||||| ||| | ||| |||||||| || ||||||||||| ||| | |||| |
|
|
| T |
16829727 |
acatcaacaacctatgactctgttacttataacgacaactaacaa-cttacaacccgaaccaacaccttgtatattctaattgaatgcagttaagtataa |
16829825 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| || ||| || | ||||||| |||||||||| ||||| |
|
|
| T |
16829826 |
accagcattcatcaac-aatcataatcaatcaacatcaaca |
16829865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 16102272 - 16102410
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
16102272 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
16102370 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
16102371 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
16102410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 12595886 - 12595924
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaac |
47 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
12595886 |
acatcaacaacctatgactccgttacttagaacgacaac |
12595924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 29325428 - 29325214
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
29325428 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
29325329 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
29325328 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
29325229 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
29325228 |
tcatatcaacatctt |
29325214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 26495800 - 26496013
Alignment:
| Q |
10 |
catcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26495800 |
catcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataaa |
26495899 |
T |
|
| Q |
110 |
ccaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
26495900 |
ccaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggact |
26495999 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
26496000 |
catatcaacatctt |
26496013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 4397638 - 4397776
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||| |||| |||| |||| ||| ||||||||| ||| | ||| |||||||| || ||||||||||| ||| | |||| |
|
|
| T |
4397638 |
acatcaacaacctatgactccgtttcttataacgacaactcacaa-cttacaacccgaaccaacaccttgtatattcgaattgaatgcagttaagtataa |
4397736 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| || ||| || | ||||||| |||||||||||||||| |
|
|
| T |
4397737 |
accagcattcatcaac-aatcataatcaatcaacagcaaca |
4397776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 22758851 - 22758711
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac-cttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| |||||| ||||||| |||||||||||| |||| |||||| ||||||| ||| | ||| ||||| || || ||| ||||||| ||| |||| |
|
|
| T |
22758851 |
acatcaacaacctttgactccattacttagaacgacaacttgcaacttttacaactcgaacctacaccttgtgtattctaatggaatgcagttaaacata |
22758752 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||| ||||||||| | ||||||| |||||||| ||||||| |
|
|
| T |
22758751 |
aaccagcaatcagcaac-aatcatactcaatcaatagcaaca |
22758711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 41791585 - 41791799
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
41791585 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
41791684 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
41791685 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
41791784 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
41791785 |
tcatatcaacatctt |
41791799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 14698631 - 14698844
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14698631 |
acatcaacaatctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatgtatgcatac |
14698730 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
14698731 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataatcatcatatacaacaagtaggact |
14698830 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
14698831 |
catatcaacatctt |
14698844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 4170939 - 4171149
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4170939 |
acatcaacaatctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatgtatgcatac |
4171038 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
4171039 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataatcatcatatacaacaagtaggact |
4171138 |
T |
|
| Q |
209 |
catatcaacat |
219 |
Q |
| |
|
||||||||||| |
|
|
| T |
4171139 |
catatcaacat |
4171149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 53387907 - 53387694
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| || ||| |||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
53387907 |
acatcaacatcctctgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatgcatgcatac |
53387808 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
53387807 |
accaacaatcagtagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataaccatcatatacaacaagtaggact |
53387708 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
53387707 |
catatcaacatctt |
53387694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 16278298 - 16278084
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaa-cgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| |||||||||||||| |||||||||| || |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
16278298 |
acatcaacaacctatgactccattacttagaaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatgtatgcata |
16278199 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
16278198 |
caccaacaatcagcagcaaatcatattcaatcaacaacaacatataataacaagcagcgagacaacaataataataaccatcatatacaacaagtaggac |
16278099 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
16278098 |
tcatataaacatctt |
16278084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 56115796 - 56115656
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac-cttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| ||| | ||| ||||| || || ||| ||||||| ||| |||| |
|
|
| T |
56115796 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaacttttacaactcgaacctacaccttgtgtattctaatggaatgcagttaaacata |
56115697 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||| | ||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
56115696 |
aactagcaatcagcaac-aatcatactcaatcaacagcaaca |
56115656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 21189851 - 21189781
Alignment:
| Q |
152 |
taataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggactcatatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| || || |||| ||||||| |||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
21189851 |
taataataagcagcaagtcaccaacaataataatcatcatatacaacaagtataactgatatcaacatctt |
21189781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 287019 - 287157
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
287019 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
287117 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
287118 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
287157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 28382753 - 28382891
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
28382753 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
28382851 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
28382852 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
28382891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 47127016 - 47126878
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
47127016 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
47126918 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
47126917 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
47126878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 21239312 - 21239099
Alignment:
| Q |
10 |
catcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21239312 |
catcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataaa |
21239213 |
T |
|
| Q |
110 |
ccaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
21239212 |
ccaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggact |
21239113 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
21239112 |
catatcaacatctt |
21239099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 21241862 - 21241649
Alignment:
| Q |
10 |
catcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21241862 |
catcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataaa |
21241763 |
T |
|
| Q |
110 |
ccaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
21241762 |
ccaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggact |
21241663 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
21241662 |
catatcaacatctt |
21241649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 24504616 - 24504830
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24504616 |
acatcaacaatctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
24504715 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
24504716 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
24504815 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
24504816 |
tcatatcaacatctt |
24504830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 20591292 - 20591079
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||| || | ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20591292 |
acatcaacaacctatgactccgttacttagaacgacaacttgcagccttacaacctaaaccaacatcttgtataatccaattgaatgcatttatgcatac |
20591193 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
20591192 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataaccatcatatacaacaagtaggact |
20591093 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
20591092 |
catatcaaaatctt |
20591079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 31503513 - 31503723
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||| |||||||||||||| ||| | ||| ||||| | || ||||||||||| |||||||| |
|
|
| T |
31503513 |
acatcaacaatctatgactccgttacttagaacgacaacttgcaaccttacaactcgaaccaacacattgtacattctaattgaatgcatgtatgcatac |
31503612 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
31503613 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataatcatcatatacaacaagtaggact |
31503712 |
T |
|
| Q |
209 |
catatcaacat |
219 |
Q |
| |
|
||||||||||| |
|
|
| T |
31503713 |
catatcaacat |
31503723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 31506079 - 31506289
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||| |||||||||||||| ||| | ||| ||||| | || ||||||||||| |||||||| |
|
|
| T |
31506079 |
acatcaacaatctatgactccgttacttagaacgacaacttgcaaccttacaactcgaaccaacacattgtacattctaattgaatgcatgtatgcatac |
31506178 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
31506179 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataatcatcatatacaacaagtaggact |
31506278 |
T |
|
| Q |
209 |
catatcaacat |
219 |
Q |
| |
|
||||||||||| |
|
|
| T |
31506279 |
catatcaacat |
31506289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 28348999 - 28349139
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaacct-tacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| | |||||| ||| | ||| ||||| || || ||| ||||||| ||| ||||| |
|
|
| T |
28348999 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaacttctacaactcgaacctacaccttgtgtattctaatggaatgcagttaagcata |
28349098 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||| ||||||||| | |||||||||||||||||||||||| |
|
|
| T |
28349099 |
aaccagcaatcagcaac-aatcatattcaatcaacagcaaca |
28349139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 12628080 - 12627942
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||| |||||||| ||| | ||| ||||||| || ||||||||||| ||| |||||| |
|
|
| T |
12628080 |
acatcaacaacctatgactccgttacttagaacgacaactcgcaa-cttacaactcgaaccaacaccttgtatgttctaattgaatgcagttaagcataa |
12627982 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| |||||| || | ||||||| |||||||||| ||||| |
|
|
| T |
12627981 |
accagcaatcatcaac-aatcataatcaatcaacaacaaca |
12627942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 44620857 - 44620995
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
44620857 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
44620955 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
44620956 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
44620995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 159; Significance: 8e-85; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 16006331 - 16006545
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16006331 |
acatcaacaacttatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
16006430 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |
|
|
| T |
16006431 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagactacaacaataataaccatcatatacaacgagtaggac |
16006530 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16006531 |
tcatatcaacatctt |
16006545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 21743491 - 21743278
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
21743491 |
acatcaacaatctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatgtatgcatac |
21743392 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
21743391 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataatcatcatatacaacaagtaggact |
21743292 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
21743291 |
catatcaacatctt |
21743278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 17505974 - 17505761
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| || ||| |||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
17505974 |
acatcaacaccctctgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatgtatgcatac |
17505875 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
17505874 |
accaacaatcagtagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataaccatcatatacaacaagtaggact |
17505775 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
17505774 |
catatcaacatctt |
17505761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 17547240 - 17547453
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| || ||| |||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
17547240 |
acatcaacaccctctgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatgtatgcatac |
17547339 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
17547340 |
accaacaatcagtagcaaatcatattcaatcaacagcaacatataataacaagcagcgagacaacaataataataaccatcatatacaacaagtaggact |
17547439 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
17547440 |
catatcaacatctt |
17547453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 8776276 - 8776487
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||| || |||| | |||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
8776276 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttaccacttgaaccaacatcttgtataattcaattgaatgcatttatgcataa |
8776375 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
8776376 |
accaacaatcagcagcaaatcatattcaat--tcaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggact |
8776473 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
8776474 |
catattaacatctt |
8776487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 38828160 - 38828302
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| ||| | ||| |||||||| || ||||||||||| |||||| || |
|
|
| T |
38828160 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaactttacaactcgaacccacaccttgtatattctaattgaatgcagctatgcacaa |
38828259 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacata |
151 |
Q |
| |
|
|||| || |||||| |||||||||||||||||| ||||||||| |
|
|
| T |
38828260 |
accagcagtcagcaacaaatcatattcaatcaatagcaacata |
38828302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 35366155 - 35366293
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| | || |||||||| ||| | ||| |||||||| || ||||||||||| ||| |||||| |
|
|
| T |
35366155 |
acatcaacaacctatgactccgttacttagaacgacaac-tcaaaacttacaactcgaaccaacaccttgtatattctaattgaatgcaattaagcataa |
35366253 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| |||||| || | |||||||||||||||||||||||| |
|
|
| T |
35366254 |
accagcaatcatcaac-aatcatattcaatcaacagcaaca |
35366293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 21065349 - 21065304
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac |
54 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
21065349 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaac |
21065304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 13395655 - 13395517
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
13395655 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
13395557 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
13395556 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
13395517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 48785242 - 48785380
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
48785242 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
48785340 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
48785341 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
48785380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0525 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0525
Description:
Target: scaffold0525; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 9084 - 9298
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9084 |
acatcaacaacctatgactcagttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
9183 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
9184 |
accaacaatcagcagcgaatcatattcaattcaacaacaacatataacaataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
9283 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
9284 |
tcatatcaacatctt |
9298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0525; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 11065 - 11027
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaac |
47 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
11065 |
acatcaacaacctatgactccgttacttagaacgacaac |
11027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 45135113 - 45134899
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||| || |||| | |||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
45135113 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttaccacttgaaccaacatcttgtataattcaattgaatgcatttatgcataa |
45135014 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggac |
207 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
45135013 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataagcagcgagacaacaacaataataaccatcatatacaacgagtaggac |
45134914 |
T |
|
| Q |
208 |
tcatatcaacatctt |
222 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
45134913 |
tcatatcaacatctt |
45134899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 6608460 - 6608247
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
6608460 |
acatcaacaatctatgactccgttacttagaacgacaacttgcaaccttacaacctgaaccaacatcttgtataatccaattgaatgcatgtatgcatac |
6608361 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||| |
|
|
| T |
6608360 |
accaacaatcagcagcaaatcatattcaatcaacaacaacatataataacaagcagcgagacaacaataataataatcatcatatacaacaagtaggact |
6608261 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
6608260 |
catatcaacatctt |
6608247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 7301267 - 7301056
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
7301267 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaaccttacaacctgaactaacatcttgtataatctaattgaatgcatttatgcataa |
7301168 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacatataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggact |
208 |
Q |
| |
|
||||||||||| |||||||||||||||||| || ||||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
7301167 |
accaacaatcaacagcaaatcatattcaat--tcaacaacatataataacaagcagcgagacaacgaccataataaccatcatatacaacgagtaggact |
7301070 |
T |
|
| Q |
209 |
catatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
7301069 |
catatcaacatctt |
7301056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 21415294 - 21415220
Alignment:
| Q |
148 |
catataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggactcatatcaacatctt |
222 |
Q |
| |
|
|||||||||||||||||| || ||||||| ||||||| |||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
21415294 |
catataataataagcagcaagtcaacaacaataataatcatcatatacaacaagtataactcatatcaacatctt |
21415220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 363880 - 364020
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac-cttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| ||| | ||| ||||| || || ||| ||||||| ||| |||| |
|
|
| T |
363880 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaacttttacaactcgaacctacaccttgtgtattctaatggaatgcagttaaacata |
363979 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||| | ||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
363980 |
aactagcaatcagcaac-aatcatactcaatcaacagcaaca |
364020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 24707998 - 24707859
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| |||||||||||||||||||||| || | |||| ||| ||||||||| ||| | ||| ||||||| || ||||||||||| ||| | |||| |
|
|
| T |
24707998 |
acatcaacaacctatgactccgttacttataatgacaactcacaa-cttacaacccgaaccaacacattgtatattctaattgaatgcagttaagtataa |
24707900 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcat-attcaatcaacagcaaca |
149 |
Q |
| |
|
|||| || ||| || | |||||| |||||||||||||||||| |
|
|
| T |
24707899 |
accagcattcatcaac-aatcataattcaatcaacagcaaca |
24707859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 44431953 - 44432093
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac-cttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| |||| ||||||||||||| |||||||| |||| |||||| ||||||| ||| | ||| ||||| || || ||| ||||| | ||| |||| |
|
|
| T |
44431953 |
acatcaacaacatatgactccgttatttagaacgacaacttgcaacttttacaactcgaacctacaccttgtgtattctaatggaatgtagttaaacata |
44432052 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||| ||||||||| | ||||||| |||||||||| ||||| |
|
|
| T |
44432053 |
aaccatcaatcagcaac-aatcatactcaatcaacaacaaca |
44432093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 22145577 - 22145439
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
22145577 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
22145479 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
22145478 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
22145439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 22059581 - 22059543
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaac |
47 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
22059581 |
acatcaacaacctatgactccgttacttagaacgacaac |
22059543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 10829619 - 10829505
Alignment:
| Q |
33 |
acttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataaaccaacaatcagcagcaaatcata |
132 |
Q |
| |
|
|||||||||| |||| ||||| ||||||| ||| | ||| |||||||| || ||||| || | |||||||||||||| |||||| || ||| ||||| |
|
|
| T |
10829619 |
acttagaacgacaactcgcaac-ttacaactcgaaccaacaccttgtatattctaattgtttgtagttatgcataaaccagcaatcatcaacaa-tcata |
10829522 |
T |
|
| Q |
133 |
ttcaatcaacagcaaca |
149 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
10829521 |
atcaatcaacagcaaca |
10829505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 136; Significance: 4e-71; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 20579376 - 20579592
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
20579376 |
acatcaacaacctatggctccgttacttagaacgacaacttgcaaccttacaacccgaaccaacatcttgtataatccaattgaatgcatttatgcataa |
20579475 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaa-tcaacagcaacat---ataataataagcagcgagacaacaacgataataaccatcatatacaaaaagtag |
204 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| |
|
|
| T |
20579476 |
accaacaatcagcagcaaatcatattcaattcaacaacaacatataataataataagtagcgagac-acaacaataataaccatcatatacaacgagtag |
20579574 |
T |
|
| Q |
205 |
gactcatatcaacatctt |
222 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
20579575 |
gactcatatcaacatctt |
20579592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 2333163 - 2333021
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| ||| ||| |||||||| || ||||||||||| ||||||| || |
|
|
| T |
2333163 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaactttacaactcgaactcacaccttgtatattctaattgaatgcagttatgcacaa |
2333064 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaacata |
151 |
Q |
| |
|
|||| || |||||| |||| ||||||||||||| ||||||||| |
|
|
| T |
2333063 |
accagcagtcagcaacaaaacatattcaatcaatagcaacata |
2333021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 294127 - 294267
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaacct-tacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| | |||||| ||| ||| ||||| || || ||| ||||||| ||| ||||| |
|
|
| T |
294127 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaacttctacaactcgaacttacaccttgtgtattctaatggaatgcagttaagcata |
294226 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||| | ||||||||| | ||||||||||||| |||||||||| |
|
|
| T |
294227 |
aactagcaatcagcaac-aatcatattcaattaacagcaaca |
294267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 20631245 - 20631383
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| || | |||||||| ||| | ||| ||||| | || ||||||||||| ||| | |||| |
|
|
| T |
20631245 |
acatcaacaacctatgactccgttacttagaacgacaactcgcca-cttacaactcgaaccaacacattgtacattctaattgaatgcagttaagtataa |
20631343 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| | |||| | | ||||||| |||||||||||||||| |
|
|
| T |
20631344 |
accagcgatcattaac-aatcataatcaatcaacagcaaca |
20631383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 24087348 - 24087485
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaaccttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcataa |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||| ||||||| || | | ||| |||||||| || ||||||||| | ||| |||||| |
|
|
| T |
24087348 |
acatcaacaacctatgactccgttacttagaacgacaactcgcaa-cttacaa-ctcgaccaacaccttgtatattctaattgaatgtagttaagcataa |
24087445 |
T |
|
| Q |
109 |
accaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
|||| ||| | || | ||||||| | |||||||||||||| |
|
|
| T |
24087446 |
accagcaaaaatcaac-aatcataattaatcaacagcaaca |
24087485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 14432544 - 14432506
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaac |
47 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
14432544 |
acatcaacaacctatgactccgttacttagaacgacaac |
14432506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 36181504 - 36181542
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaac |
47 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
36181504 |
acatcaacaacctatgactccgttacttagaacgacaac |
36181542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0395 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0395
Description:
Target: scaffold0395; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 8688 - 8548
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac-cttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| ||| | ||| ||||| || || ||| ||||||| ||| ||||| |
|
|
| T |
8688 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaacttttacaactcgaacctacaccttgtgtattctaatggaatgcagttaagcata |
8589 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||| ||||||||| | |||||||||||||||||| ||||| |
|
|
| T |
8588 |
aaccagcaatcagcaac-aatcatattcaatcaacaacaaca |
8548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0109 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0109
Description:
Target: scaffold0109; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 2431 - 2570
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac-cttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| ||| | ||| ||||| || || ||| ||||| | ||| |||| |
|
|
| T |
2431 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaacttttacaactcgaacctacaccttgtgtattctaatggaatgtagttaaacata |
2530 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaac |
148 |
Q |
| |
|
||||| ||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
2531 |
aaccagcaatcagcaac-aatcatactcaatcaacagcaac |
2570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 162376 - 162515
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaac-cttacaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| ||| | ||| ||||| || || ||| ||||||| ||| |||| |
|
|
| T |
162376 |
acatcaacaacctatgactccgttacttagaacgacaacttgcaacttttacaactcgaacctacaccttgtgtattctaatggaatgcagttaaacata |
162475 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaac |
148 |
Q |
| |
|
||| | ||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
162476 |
aactagcaatcagcaac-aatcataatcaatcaacagcaac |
162515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0586 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0586
Description:
Target: scaffold0586; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 1911 - 1981
Alignment:
| Q |
152 |
taataataagcagcgagacaacaacgataataaccatcatatacaaaaagtaggactcatatcaacatctt |
222 |
Q |
| |
|
|||||||||||||| || ||||||| ||||||| |||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
1911 |
taataataagcagcaagtcaacaacaataataatcatcatatacaacaagtataactcatatcaacatctt |
1981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 137867 - 138007
Alignment:
| Q |
9 |
acatcatcaacctatgactccgttacttagaacgtcaacgtgcaacctt-acaacctgaatcgacatcttgtataatccaattgaatgcacttatgcata |
107 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||| |||| ||||| || ||||| ||| | ||| ||||| || || ||| ||||| | ||| |||| |
|
|
| T |
137867 |
acatcaacaacctatgactccattacttagaacgacaacttgcaaattttacaactcgaacctacaccttgtgtattctaatggaatgaagttaaacata |
137966 |
T |
|
| Q |
108 |
aaccaacaatcagcagcaaatcatattcaatcaacagcaaca |
149 |
Q |
| |
|
||||| ||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
137967 |
aaccagcaatcagcaacaa-tcatactcaatcaacagcaaca |
138007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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