View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3879_high_47 (Length: 267)

Name: NF3879_high_47
Description: NF3879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3879_high_47
NF3879_high_47
[»] chr4 (49 HSPs)
chr4 (137-248)||(38960327-38960437)
chr4 (67-137)||(51224725-51224795)
chr4 (67-136)||(4550448-4550517)
chr4 (67-137)||(56025370-56025440)
chr4 (67-136)||(24019859-24019928)
chr4 (82-138)||(8026650-8026706)
chr4 (98-139)||(54165056-54165097)
chr4 (87-139)||(9362700-9362752)
chr4 (82-130)||(20632542-20632590)
chr4 (82-137)||(5208214-5208269)
chr4 (98-137)||(31049021-31049060)
chr4 (98-137)||(43434473-43434512)
chr4 (90-137)||(44368089-44368136)
chr4 (98-137)||(45779190-45779229)
chr4 (104-139)||(45923517-45923552)
chr4 (82-136)||(9032909-9032963)
chr4 (82-136)||(27001297-27001351)
chr4 (82-136)||(47106040-47106094)
chr4 (89-138)||(24154746-24154795)
chr4 (91-136)||(24235458-24235503)
chr4 (82-139)||(45548669-45548726)
chr4 (67-132)||(46844133-46844198)
chr4 (87-132)||(52895231-52895276)
chr4 (82-130)||(15638259-15638307)
chr4 (98-138)||(20956480-20956520)
chr4 (90-138)||(33483992-33484040)
chr4 (64-135)||(34460629-34460701)
chr4 (74-138)||(47519606-47519670)
chr4 (67-135)||(52669498-52669566)
chr4 (90-137)||(2999111-2999158)
chr4 (67-130)||(32901443-32901506)
chr4 (82-137)||(51377180-51377235)
chr4 (82-136)||(1796494-1796547)
chr4 (67-137)||(4971900-4971970)
chr4 (94-136)||(12694316-12694358)
chr4 (82-136)||(31221542-31221596)
chr4 (67-137)||(37022375-37022445)
chr4 (82-136)||(53662330-53662384)
chr4 (91-136)||(30866488-30866533)
chr4 (87-132)||(33860651-33860696)
chr4 (90-130)||(8681078-8681118)
chr4 (90-130)||(18568709-18568749)
chr4 (99-139)||(26718377-26718417)
chr4 (99-139)||(26731005-26731045)
chr4 (82-130)||(36728516-36728564)
chr4 (82-130)||(41495142-41495190)
chr4 (103-139)||(45521617-45521653)
chr4 (72-132)||(46282380-46282440)
chr4 (90-130)||(55642499-55642539)
[»] chr3 (40 HSPs)
chr3 (67-136)||(40478175-40478244)
chr3 (67-137)||(45295626-45295696)
chr3 (67-136)||(41877802-41877871)
chr3 (82-138)||(14992204-14992260)
chr3 (67-135)||(42718235-42718301)
chr3 (67-129)||(25542866-25542928)
chr3 (83-136)||(52453980-52454033)
chr3 (90-138)||(8254164-8254212)
chr3 (74-137)||(28263666-28263729)
chr3 (67-137)||(31007236-31007309)
chr3 (82-137)||(34021350-34021405)
chr3 (83-137)||(11327238-11327292)
chr3 (82-136)||(35756109-35756163)
chr3 (82-138)||(13159790-13159846)
chr3 (91-139)||(23183604-23183652)
chr3 (82-137)||(43900901-43900956)
chr3 (82-137)||(50279974-50280029)
chr3 (64-134)||(53102792-53102862)
chr3 (87-132)||(20080077-20080122)
chr3 (92-137)||(42864203-42864248)
chr3 (74-139)||(46344535-46344600)
chr3 (84-137)||(50879726-50879779)
chr3 (87-139)||(24095428-24095480)
chr3 (82-130)||(54233395-54233443)
chr3 (84-135)||(7039123-7039174)
chr3 (82-133)||(36819085-36819136)
chr3 (86-137)||(46626696-46626747)
chr3 (82-136)||(3957906-3957960)
chr3 (90-132)||(47056417-47056459)
chr3 (87-140)||(10811131-10811184)
chr3 (90-139)||(23906872-23906921)
chr3 (87-132)||(30863098-30863143)
chr3 (87-132)||(49167754-49167799)
chr3 (87-132)||(55400003-55400048)
chr3 (86-130)||(1208078-1208122)
chr3 (103-135)||(7949926-7949958)
chr3 (82-138)||(32931804-32931860)
chr3 (91-135)||(44855389-44855433)
chr3 (90-130)||(51717578-51717618)
chr3 (90-130)||(53932285-53932325)
[»] scaffold0576 (1 HSPs)
scaffold0576 (67-136)||(9544-9613)
[»] chr6 (24 HSPs)
chr6 (67-136)||(15328603-15328672)
chr6 (67-136)||(15364773-15364842)
chr6 (67-137)||(25924751-25924821)
chr6 (67-137)||(34413205-34413275)
chr6 (83-139)||(2881463-2881519)
chr6 (68-137)||(32784853-32784922)
chr6 (67-133)||(28965731-28965797)
chr6 (83-134)||(2862202-2862253)
chr6 (82-135)||(31368501-31368557)
chr6 (87-132)||(2689086-2689131)
chr6 (67-135)||(3339388-3339456)
chr6 (82-136)||(237286-237340)
chr6 (67-133)||(3660244-3660310)
chr6 (82-127)||(6435165-6435210)
chr6 (67-132)||(27334978-27335043)
chr6 (67-132)||(27395718-27395783)
chr6 (82-130)||(1803998-1804046)
chr6 (87-139)||(20822890-20822942)
chr6 (86-130)||(24038314-24038358)
chr6 (90-133)||(29376607-29376650)
chr6 (83-137)||(2056913-2056967)
chr6 (87-137)||(32459539-32459589)
chr6 (83-139)||(11017512-11017568)
chr6 (65-137)||(21210368-21210440)
[»] chr7 (35 HSPs)
chr7 (68-139)||(29609762-29609833)
chr7 (67-136)||(33881593-33881662)
chr7 (67-136)||(17157247-17157316)
chr7 (82-136)||(26041439-26041493)
chr7 (82-136)||(27164725-27164779)
chr7 (67-136)||(30402081-30402148)
chr7 (67-136)||(16645554-16645623)
chr7 (67-136)||(17619915-17619984)
chr7 (67-132)||(42060771-42060836)
chr7 (72-136)||(116750-116814)
chr7 (82-137)||(44511268-44511323)
chr7 (82-135)||(3344991-3345044)
chr7 (83-136)||(33050313-33050366)
chr7 (67-139)||(10014840-10014912)
chr7 (82-138)||(20406670-20406726)
chr7 (82-137)||(35004130-35004185)
chr7 (74-136)||(2346947-2347009)
chr7 (64-130)||(8742494-8742560)
chr7 (82-132)||(25614713-25614763)
chr7 (64-138)||(29162165-29162239)
chr7 (82-136)||(30864305-30864359)
chr7 (82-136)||(39369431-39369485)
chr7 (82-130)||(1838353-1838401)
chr7 (83-139)||(32044910-32044966)
chr7 (87-139)||(37899235-37899287)
chr7 (74-130)||(47530185-47530241)
chr7 (82-137)||(38978621-38978675)
chr7 (84-130)||(37385127-37385173)
chr7 (87-137)||(41893914-41893964)
chr7 (82-132)||(42431852-42431902)
chr7 (94-136)||(46456555-46456597)
chr7 (87-132)||(6269370-6269415)
chr7 (83-136)||(23330037-23330090)
chr7 (87-139)||(37899320-37899372)
chr7 (82-130)||(42476462-42476510)
[»] chr8 (37 HSPs)
chr8 (67-137)||(11089691-11089761)
chr8 (67-137)||(43587755-43587825)
chr8 (67-136)||(38504284-38504353)
chr8 (67-136)||(43602311-43602380)
chr8 (64-136)||(34972176-34972248)
chr8 (67-136)||(6105323-6105392)
chr8 (88-139)||(9208063-9208114)
chr8 (87-137)||(12783765-12783815)
chr8 (82-136)||(30927819-30927873)
chr8 (67-140)||(11139010-11139083)
chr8 (82-138)||(36593672-36593728)
chr8 (89-140)||(31596944-31596995)
chr8 (86-136)||(30129542-30129592)
chr8 (82-139)||(19723091-19723148)
chr8 (64-136)||(6656227-6656299)
chr8 (64-136)||(6736629-6736701)
chr8 (77-137)||(37568499-37568559)
chr8 (82-137)||(1065546-1065601)
chr8 (90-137)||(6745929-6745976)
chr8 (82-137)||(14228822-14228877)
chr8 (98-137)||(29509399-29509438)
chr8 (82-137)||(41273644-41273699)
chr8 (87-137)||(4658285-4658335)
chr8 (99-137)||(27630896-27630934)
chr8 (67-133)||(33817271-33817337)
chr8 (86-132)||(41659371-41659417)
chr8 (99-132)||(9314415-9314448)
chr8 (103-136)||(20895894-20895927)
chr8 (87-132)||(36426042-36426087)
chr8 (99-136)||(39258943-39258980)
chr8 (88-133)||(41293613-41293658)
chr8 (82-130)||(2597054-2597102)
chr8 (87-139)||(3946237-3946289)
chr8 (77-137)||(13565405-13565465)
chr8 (98-138)||(32185564-32185604)
chr8 (82-138)||(34970334-34970390)
chr8 (82-130)||(37562035-37562083)
[»] chr5 (38 HSPs)
chr5 (67-136)||(7077227-7077296)
chr5 (69-136)||(26685807-26685874)
chr5 (69-136)||(26955538-26955605)
chr5 (82-137)||(30574264-30574319)
chr5 (65-137)||(36548267-36548339)
chr5 (82-138)||(4292912-4292968)
chr5 (85-137)||(12417758-12417810)
chr5 (85-132)||(10372182-10372229)
chr5 (82-137)||(19271988-19272043)
chr5 (82-137)||(38011001-38011056)
chr5 (82-136)||(3263396-3263450)
chr5 (67-137)||(11464010-11464080)
chr5 (82-136)||(15622173-15622227)
chr5 (98-136)||(31006190-31006228)
chr5 (72-137)||(3154530-3154595)
chr5 (87-136)||(28501763-28501812)
chr5 (87-139)||(4088440-4088492)
chr5 (82-138)||(32634837-32634893)
chr5 (81-137)||(35972698-35972754)
chr5 (72-139)||(372605-372672)
chr5 (67-130)||(8959274-8959337)
chr5 (90-137)||(9594615-9594662)
chr5 (82-137)||(12512922-12512977)
chr5 (82-133)||(33823585-33823636)
chr5 (98-137)||(41192720-41192759)
chr5 (87-137)||(15917913-15917963)
chr5 (87-137)||(17402944-17402994)
chr5 (87-137)||(19840008-19840058)
chr5 (87-137)||(21012567-21012617)
chr5 (83-137)||(30776749-30776803)
chr5 (87-132)||(6517716-6517761)
chr5 (103-136)||(9599656-9599689)
chr5 (87-132)||(10649439-10649484)
chr5 (91-136)||(25345476-25345521)
chr5 (87-139)||(189725-189777)
chr5 (87-139)||(6940172-6940224)
chr5 (99-139)||(8267854-8267894)
chr5 (82-130)||(17489477-17489525)
[»] chr2 (41 HSPs)
chr2 (67-136)||(30413620-30413689)
chr2 (67-135)||(12175217-12175285)
chr2 (82-138)||(4097073-4097129)
chr2 (82-137)||(36582385-36582440)
chr2 (65-139)||(33003935-33004009)
chr2 (82-137)||(6885039-6885094)
chr2 (67-138)||(38021470-38021540)
chr2 (82-136)||(44484544-44484598)
chr2 (82-139)||(33029987-33030044)
chr2 (89-137)||(4061983-4062031)
chr2 (82-138)||(10550345-10550401)
chr2 (85-133)||(22353066-22353114)
chr2 (82-133)||(37966485-37966536)
chr2 (82-137)||(43936348-43936402)
chr2 (98-136)||(6851559-6851597)
chr2 (82-136)||(23047971-23048025)
chr2 (83-137)||(29871242-29871296)
chr2 (67-136)||(12358427-12358496)
chr2 (87-132)||(15269865-15269910)
chr2 (82-138)||(9458524-9458580)
chr2 (83-139)||(38246636-38246692)
chr2 (82-137)||(3195974-3196029)
chr2 (106-137)||(27540156-27540187)
chr2 (87-138)||(43666701-43666752)
chr2 (93-132)||(45372602-45372641)
chr2 (99-137)||(1095859-1095897)
chr2 (87-137)||(9634458-9634508)
chr2 (82-136)||(33857346-33857400)
chr2 (87-132)||(2563708-2563753)
chr2 (91-136)||(3298993-3299038)
chr2 (87-132)||(6999090-6999135)
chr2 (87-132)||(7502450-7502495)
chr2 (87-132)||(13765404-13765449)
chr2 (87-132)||(22526016-22526061)
chr2 (64-137)||(23391173-23391246)
chr2 (99-136)||(30487336-30487373)
chr2 (87-132)||(37105645-37105690)
chr2 (87-132)||(45259307-45259352)
chr2 (82-130)||(5962767-5962815)
chr2 (64-136)||(29893721-29893793)
chr2 (82-130)||(36909738-36909785)
[»] chr1 (31 HSPs)
chr1 (67-140)||(5383873-5383946)
chr1 (67-133)||(49189102-49189168)
chr1 (67-138)||(37669512-37669583)
chr1 (67-137)||(10385528-10385598)
chr1 (82-137)||(19920891-19920946)
chr1 (97-139)||(24749627-24749669)
chr1 (82-132)||(50777315-50777365)
chr1 (67-136)||(43195977-43196046)
chr1 (98-133)||(27563617-27563652)
chr1 (82-136)||(50035426-50035480)
chr1 (82-138)||(27578311-27578367)
chr1 (82-130)||(42843238-42843286)
chr1 (82-130)||(46902732-46902780)
chr1 (82-137)||(6829672-6829727)
chr1 (87-138)||(7171258-7171309)
chr1 (82-137)||(13813687-13813742)
chr1 (82-137)||(25130832-25130887)
chr1 (74-137)||(29489246-29489309)
chr1 (82-132)||(9011774-9011824)
chr1 (87-137)||(10890068-10890118)
chr1 (87-137)||(11947794-11947844)
chr1 (87-137)||(15705084-15705134)
chr1 (82-136)||(27895649-27895703)
chr1 (91-137)||(29877018-29877064)
chr1 (103-137)||(51704686-51704720)
chr1 (87-137)||(52362481-52362531)
chr1 (87-132)||(13489666-13489711)
chr1 (103-139)||(17167846-17167882)
chr1 (103-135)||(42256598-42256630)
chr1 (87-139)||(47214205-47214257)
chr1 (99-139)||(51193165-51193205)
[»] scaffold0172 (1 HSPs)
scaffold0172 (83-136)||(17105-17158)
[»] scaffold0115 (1 HSPs)
scaffold0115 (67-135)||(35382-35450)
[»] scaffold0514 (1 HSPs)
scaffold0514 (82-139)||(1381-1438)
[»] scaffold0121 (1 HSPs)
scaffold0121 (64-133)||(29894-29963)
[»] scaffold0004 (1 HSPs)
scaffold0004 (64-137)||(249029-249102)
[»] scaffold0002 (1 HSPs)
scaffold0002 (82-138)||(147142-147198)
[»] scaffold0085 (1 HSPs)
scaffold0085 (82-136)||(31188-31242)
[»] scaffold0618 (1 HSPs)
scaffold0618 (74-139)||(3482-3547)
[»] scaffold0522 (1 HSPs)
scaffold0522 (91-136)||(2392-2437)
[»] scaffold0027 (1 HSPs)
scaffold0027 (86-132)||(5212-5258)
[»] scaffold0193 (1 HSPs)
scaffold0193 (90-138)||(24810-24858)


Alignment Details
Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 38960437 - 38960327
Alignment:
Q  137 taaccataagtataataattggtcgaaaacaagataaagaaggataaggcttaaagaaatagttatgatatttgaacttaaaaactttcacatccacatc 236  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38960437 taaccataagtata-taattggtcgaaaacaagataaagaaggataaggcttaaagaaatagttatgatatttgaacttaaaaactttgacatccacatc 38960339  T
Q  237 ctataagaacgc 248  Q
    ||||||||||||    
T  38960338 ctataagaacgc 38960327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 51224795 - 51224725
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  51224795 caatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtacaaatatcattgctct 51224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 4550448 - 4550517
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  4550448 caatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtataaatatcattgctc 4550517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 56025370 - 56025440
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| || ||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  56025370 caatcaaaagagagaaaatcaaagttgtcaccaaagttgtcattaaatgaatgtacaaatatcattgctct 56025440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 24019928 - 24019859
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||  |||||| |||||||||||| |||||||||||| |||||||||||||||||||||    
T  24019928 caatcaaaagagagagaaacaaggttgtcaccaaagttgtcattaaatagatgtacaaatatcattgctc 24019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 8026706 - 8026650
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||    
T  8026706 aaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctcta 8026650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 54165097 - 54165056
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  54165097 caaagttgtcattaaatggatgtacaaatatcattgctctaa 54165056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 9362700 - 9362752
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||    
T  9362700 aaagttgtcacaaaagttgtcattaaatggatgttcaaatatcatttctctaa 9362752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 20632590 - 20632542
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||    
T  20632590 aaaataaagttgtcaccaaaattgtcatcaattggatgtacaaatatca 20632542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 5208269 - 5208214
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| |||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  5208269 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 5208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 31049021 - 31049060
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  31049021 caaagttgtcattaaatggatgtacaaatatcattgctct 31049060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 43434473 - 43434512
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  43434473 caaagttgtcattaaatggatgtacaaatatcattgctct 43434512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 44368136 - 44368089
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  44368136 gttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctct 44368089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 45779229 - 45779190
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  45779229 caaaattgtcattaaatagatgtacaaatatcattgctct 45779190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 45923517 - 45923552
Alignment:
Q  104 tgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||||||||||||||||||||||||||||    
T  45923517 tgtcattaaatggatgtacaaatatcattgctctaa 45923552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 9032909 - 9032963
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| |||| || ||||||||||||||||||||||||||    
T  9032909 aaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatcattgctc 9032963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 27001351 - 27001297
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||    
T  27001351 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 27001297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 47106040 - 47106094
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||    
T  47106040 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 47106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 24154746 - 24154795
Alignment:
Q  89 agttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||||||| ||||||| ||||||||| |||||||||||||| ||||||||    
T  24154746 agttgtcatcaaaattatcattaaatagatgtacaaatatcgttgctcta 24154795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 24235458 - 24235503
Alignment:
Q  91 ttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  24235458 ttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 24235503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 45548726 - 45548669
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||| || ||||| ||| ||||||||| || ||||||||||||||||||||||||    
T  45548726 aaaacaaggtcgtcactaaagttgtcattagatagatgtacaaatatcattgctctaa 45548669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 46844198 - 46844133
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    |||| |||||| || |||||||||||||||||||| ||||| |||||| |||||  ||||||||||    
T  46844198 caataaaaagagagaaaaacaaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcatt 46844133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 52895276 - 52895231
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||    
T  52895276 aaagttgtcacaaaaattgtcatgaaatggttgtacaaatatcatt 52895231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 15638259 - 15638307
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| |||||||||||| ||||||| || |||||||||||||||||    
T  15638259 aaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 15638307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 20956520 - 20956480
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  20956520 caaagttgtcattaaatagatgtacaaatatcattgctcta 20956480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 33484040 - 33483992
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||||||||||| ||||||| || ||||||||||||||||||| |||||    
T  33484040 gttgtcaccaaagttgtcatcaattggatgtacaaatatcattactcta 33483992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 34460701 - 34460629
Alignment:
Q  64 gatcaatcaaaagaaagg-aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||||| |||||| ||| |||| ||||||||||  |||||||| ||||||| ||||||| ||||||||||||    
T  34460701 gatcaataaaaagagagggaaaataaagttgtcattaaaattgttattaaatagatgtacgaatatcattgct 34460629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 47519670 - 47519606
Alignment:
Q  74 aagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||| ||||||| ||||||| | || || ||||| ||||||||||||||||||| |||||||    
T  47519670 aagaaagaaaaacaaggttgtcaactaagttatcattcaatggatgtacaaatatcactgctcta 47519606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 52669566 - 52669498
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    |||| |||||| || |||||||  ||||||| ||| | ||||| |||||||||||||||||||||||||    
T  52669566 caataaaaagagagaaaaacaagattgtcactaaagtggtcataaaatggatgtacaaatatcattgct 52669498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 2999158 - 2999111
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||| ||||||||||| |||||||||| ||||||||||| ||||    
T  2999158 gttgtcacaaaaattgtcataaaatggatgttcaaatatcatttctct 2999111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 32901443 - 32901506
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||| |||||| || |||||||  |||||||||||||| |||| || |||||||||||||||||    
T  32901443 caataaaaagagagaaaaacaagattgtcaccaaaattatcatcaattggatgtacaaatatca 32901506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 51377235 - 51377180
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| |||||||| ||| ||||||   ||||||||||||||||||||||||||    
T  51377235 aaaacaaggttgtcactaaagttgtcaaggaatggatgtacaaatatcattgctct 51377180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 1796494 - 1796547
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||| ||||| ||| |||||||  |||||||||||||||||||||||||    
T  1796494 aaaacaaagt-gtcactaaagttgtcatggaatggatgtacaaatatcattgctc 1796547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 4971970 - 4971900
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||| || | ||||||||||| |||  |||||| |||||||||  || ||||||||||||||||||    
T  4971970 caatcaaaaaaatgaaaaacaaagttatcattaaaattatcattaaatacatatacaaatatcattgctct 4971900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 12694358 - 12694316
Alignment:
Q  94 tcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||||| || ||| |||||||||||||||||    
T  12694358 tcaccaaaattgtcattagatagatatacaaatatcattgctc 12694316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 31221542 - 31221596
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||  ||||||| |||||||||||  ||| |||||||||||||||||||||    
T  31221542 aaaacaagattgtcactaaaattgtcatggaattgatgtacaaatatcattgctc 31221596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 37022375 - 37022445
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| |||| |||| |||||||  || |||| ||| ||||||| ||||||||||||||||||||| |||||    
T  37022375 caataaaaaaaaagaaaaacaagattatcactaaagttgtcatgaaatggatgtacaaatatcatcgctct 37022445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 53662384 - 53662330
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||| || |||| ||| ||||||| ||||||||||||| ||||||||||||    
T  53662384 aaaacaaaattatcactaaagttgtcatgaaatggatgtacatatatcattgctc 53662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 30866488 - 30866533
Alignment:
Q  91 ttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| || ||||||||||||| | |||||||||||||||    
T  30866488 ttgtcaccaaagttatcattaaatggatatccaaatatcattgctc 30866533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 33860696 - 33860651
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||||||||||  |||||||||| |||||||||||    
T  33860696 aaagttgtcacaaaaattgtcaccaaatggatgttcaaatatcatt 33860651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 8681078 - 8681118
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||||||| ||||||| || |||||||||||||||||    
T  8681078 gttgtcaccaaagttgtcatcaattggatgtacaaatatca 8681118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 18568749 - 18568709
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||||||| ||||||| || |||||||||||||||||    
T  18568749 gttgtcaccaaagttgtcatcaattggatgtacaaatatca 18568709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 26718417 - 26718377
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| |||||||||| ||||||||||| ||||||    
T  26718417 aaaattgtcataaaatggatgttcaaatatcatttctctaa 26718377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 26731045 - 26731005
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| |||||||||| ||||||||||| ||||||    
T  26731045 aaaattgtcataaaatggatgttcaaatatcatttctctaa 26731005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 36728564 - 36728516
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||||||||||||||| ||||||| || |||||||  ||||||||    
T  36728564 aaaacaaagttgtcaccaaagttgtcatcaattggatgtgtaaatatca 36728516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 41495142 - 41495190
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||||||||||||||||||| |||| || | ||| |||||||||||    
T  41495142 aaaacaaagttgtcaccaaaattatcatcaattagatatacaaatatca 41495190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 45521617 - 45521653
Alignment:
Q  103 ttgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  45521617 ttgtcataaaatggatgtacaaatatcatttctctaa 45521653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 46282380 - 46282440
Alignment:
Q  72 aaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    |||||| || |||| ||||||||||| |||||| |||| |||||  |||||||||||||||    
T  46282380 aaaagagagaaaaataaagttgtcacaaaaattatcatcaaatgagtgtacaaatatcatt 46282440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 55642539 - 55642499
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||||||| || ||||||| |||||||||||||||||    
T  55642539 gttgtcaccaaagttatcattaattggatgtacaaatatca 55642499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 40478244 - 40478175
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40478244 caatcaaaagagaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 40478175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 45295696 - 45295626
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  45295696 caatcaaaagagaggaaaacaaagttgtcaccaaagctgtcattaaatggatgtacaaatatcattgctct 45295626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 41877802 - 41877871
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||| | || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41877802 caatcaaaaaagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 41877871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 14992204 - 14992260
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  14992204 aaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcatttctcta 14992260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 42718235 - 42718301
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  42718235 caatcaaaagagag--aaacaaagttgtcaccaaaattgtcattaaatgaatgtacatatatcattgct 42718301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 25542928 - 25542866
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatc 129  Q
    ||||||||||| |||||| |||||||||||| ||| || ||||||||||||||||||||||||    
T  25542928 caatcaaaagagaggaaaccaaagttgtcactaaagttatcattaaatggatgtacaaatatc 25542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 52454033 - 52453980
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  52454033 aaacaaagttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 52453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 8254164 - 8254212
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  8254164 gttgtcactaaaattgtcatgaaatggatgtacaaatatcattgctcta 8254212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 28263666 - 28263729
Alignment:
Q  74 aagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| |||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||    
T  28263666 aagaaagaaaaataaagttgtcactaaagttgtcatgaaatggatgaacaaatatcattgctct 28263729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 31007309 - 31007236
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtc---accaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| |||||||||||||||||   |||||| || |||||||||| |||||||||||| ||||||||    
T  31007309 caatcaaaagagaggaaaacaaagttgtcaccaccaaagttatcattaaatgaatgtacaaatatgattgctct 31007236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 34021405 - 34021350
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  34021405 aaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 34021350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 11327238 - 11327292
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||| |||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  11327238 aaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctct 11327292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 35756109 - 35756163
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||| |||||||    
T  35756109 aaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaatatgattgctc 35756163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 13159790 - 13159846
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||||    
T  13159790 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctcta 13159846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 23183652 - 23183604
Alignment:
Q  91 ttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| || ||||||||||||||||||||||||||| ||||||    
T  23183652 ttgtcaccaaagttatcattaaatggatgtacaaatatcatttctctaa 23183604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 43900901 - 43900956
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||||||||| ||| ||||| ||||||||||||  |||||||||||||||    
T  43900901 aaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctct 43900956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 50280029 - 50279974
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| |||||||  ||| ||||||| |||||||||||||||||||||||||||    
T  50280029 aaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcattgctct 50279974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 53102862 - 53102792
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgc 134  Q
    ||||||| | |||| || ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||    
T  53102862 gatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgc 53102792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 20080122 - 20080077
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||    
T  20080122 aaagttgtcacaaaaattgtcattaaatggatgttcaaataccatt 20080077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 42864248 - 42864203
Alignment:
Q  92 tgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||    
T  42864248 tgtcaccaaagttgtcattagatagatgtacaaatatcattgctct 42864203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 46344535 - 46344600
Alignment:
Q  74 aagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||| |||| || |||||||| ||| ||||| | ||||| |||||||||||||||||||||||    
T  46344535 aagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaatatcattgctctaa 46344600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 50879726 - 50879779
Alignment:
Q  84 aacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||||||| ||| |||||||  ||||||||||||||||||||| ||||    
T  50879726 aacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcatttctct 50879779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 24095428 - 24095480
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| |||||| |||| |||||||||| ||||||||||| ||||||    
T  24095428 aaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctctaa 24095480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 54233443 - 54233395
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| |||||||||||| ||||||| || |||||||||||||||||    
T  54233443 aaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 54233395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 7039174 - 7039123
Alignment:
Q  84 aacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||| ||| |||| ||||||||||| ||||||| |||||||||||||||||    
T  7039174 aacaaggttatcactaaaattgtcatgaaatggaagtacaaatatcattgct 7039123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 36819085 - 36819136
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    ||||||| |||||||| ||| |||||||  ||||||||||||||||||||||    
T  36819085 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattg 36819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 46626696 - 46626747
Alignment:
Q  86 caaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||||||||| ||||||| || | ||||||||||||||||| ||||    
T  46626696 caaagttgtcaccaaagttgtcatcaattagatgtacaaatatcattactct 46626747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 3957960 - 3957906
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| ||||| |  |||||||||||||||||||||||||    
T  3957960 aaaacaaggttgtcactaaagttgtcctggaatggatgtacaaatatcattgctc 3957906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 47056459 - 47056417
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||| |||||||||||| || |||||||||||||||||||    
T  47056459 gttgtcatcaaaattgtcatcaactggatgtacaaatatcatt 47056417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 10811184 - 10811131
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaac 140  Q
    ||||||||||| ||| ||||||| |||||| ||| ||||||||||| |||||||    
T  10811184 aaagttgtcacaaaagttgtcataaaatggttgttcaaatatcatttctctaac 10811131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 23906921 - 23906872
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||||||||| ||||||| || ||||||||||||||||| | ||||||    
T  23906921 gttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctaa 23906872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 30863098 - 30863143
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| |||||| |||| |||||||||| |||||||||||    
T  30863098 aaagttgtcacaaaaattatcatcaaatggatgttcaaatatcatt 30863143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 49167799 - 49167754
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  49167799 aaagttgtcacaaaagttgtcatcaaatggatgttcaaatatcatt 49167754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 55400048 - 55400003
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  55400048 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 55400003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 1208078 - 1208122
Alignment:
Q  86 caaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||||||||||| ||| ||| || |||||||||||||||||    
T  1208078 caaagttgtcaccaaagttgacatcaattggatgtacaaatatca 1208122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 7949926 - 7949958
Alignment:
Q  103 ttgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||||||||||||||||||| |||||||||||    
T  7949926 ttgtcattaaatggatgtacacatatcattgct 7949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 32931860 - 32931804
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||| |||||||| ||| ||||  | ||||||||||||||||||||||| ||||    
T  32931860 aaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatcattgttcta 32931804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 44855389 - 44855433
Alignment:
Q  91 ttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  44855389 ttgtcactaaagttgtcatgaaattgatgtacaaatatcattgct 44855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 51717578 - 51717618
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||||||| ||||||| || |||||||||||||||||    
T  51717578 gttgtcaccaaagttgtcatcaattggatgtacaaatatca 51717618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 53932325 - 53932285
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||||||| ||||||| || |||||||||||||||||    
T  53932325 gttgtcaccaaagttgtcatcaattggatgtacaaatatca 53932285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 9544 - 9613
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9544 caatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 9613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 15328603 - 15328672
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15328603 caatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 15328672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 15364773 - 15364842
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15364773 caatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 15364842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 25924821 - 25924751
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  25924821 caatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatgaatgtacaaatatcattgctct 25924751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 34413205 - 34413275
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| |  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34413205 caatcaaaagagaaaaaatcaaagttgtcaccaaaattgtcattaaattgatgtacaaatatcattgctct 34413275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 2881463 - 2881519
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  2881463 aaacaaagttgtcaccaaagttgtcattaaatggatgtccaaatatcattgctctaa 2881519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 32784853 - 32784922
Alignment:
Q  68 aatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  32784853 aatcaaaagagagaaaaacaaaattgtcaccaaaattgtcattaaataaatgtagaaatatcattgctct 32784922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 28965797 - 28965731
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    ||||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  28965797 caatcaaaagagagagaaacaaagttatcaccaaagttgtcattaaatggatgtacatatatcattg 28965731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 2862202 - 2862253
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgc 134  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  2862202 aaacaaaattgtcaccaaagttgtcattaaatggatgtccaaatatcattgc 2862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 31368557 - 31368501
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcatt---aaatggatgtacaaatatcattgct 135  Q
    |||||||||||||||||||| ||||||||   |||||||||||||||||||||||||    
T  31368557 aaaacaaagttgtcaccaaagttgtcattcataaatggatgtacaaatatcattgct 31368501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 2689086 - 2689131
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||    
T  2689086 aaagttgtcacaaaaattgtcattaaatggatgttcaaatatcatt 2689131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 3339456 - 3339388
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    |||| |||||| || |||||||  ||||||| ||| ||||||| |||||||||||||||||||||||||    
T  3339456 caataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgct 3339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 237340 - 237286
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||| |||||| ||| |||||||||||| ||||| |||||||||||||||    
T  237340 aaaacaaagatgtcacaaaagttgtcattaaatagatgtccaaatatcattgctc 237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 3660310 - 3660244
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    |||| |||||| || ||||||| |||||||| ||| |||||||  ||||||||||||||||||||||    
T  3660310 caataaaaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattg 3660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 6435165 - 6435210
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaata 127  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||    
T  6435165 aaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaata 6435210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 27334978 - 27335043
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    |||| |||||| || ||||||| |||||||  ||| ||||||| ||||||||||||||||||||||    
T  27334978 caataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcatt 27335043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 27395718 - 27395783
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    |||| |||||| || ||||||| |||||||  ||| ||||||| ||||||||||||||||||||||    
T  27395718 caataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcatt 27395783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 1803998 - 1804046
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| |||||||||||| ||||||| || |||||||||||||||||    
T  1803998 aaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 1804046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 20822890 - 20822942
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||| ||||||    
T  20822890 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctctaa 20822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 24038314 - 24038358
Alignment:
Q  86 caaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||||||||||||||||||| || | |||||||||||||||    
T  24038314 caaagttgtcaccaaaattgtcatcaattagatgtacaaatatca 24038358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 29376650 - 29376607
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  29376650 gttgtcatcaaaattgtcactaaatagatgtacaaatatcattg 29376607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 2056913 - 2056967
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||| |||||||| ||| |||||||  |||| |||||||||||||||||||||    
T  2056913 aaacaaggttgtcactaaagttgtcatggaatgaatgtacaaatatcattgctct 2056967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 32459539 - 32459589
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||| ||||    
T  32459539 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 32459589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 11017512 - 11017568
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||| |||||||| ||| |||| ||  ||||||||||||||||||| ||||||||    
T  11017512 aaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcactgctctaa 11017568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 21210368 - 21210440
Alignment:
Q  65 atcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||| | |||| || ||||||| ||||||| | || |||||||| | |||||||| |||||||||||||||    
T  21210368 atcaataagaagagagaaaaacaaggttgtcaactaagttgtcattcactggatgtataaatatcattgctct 21210440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 29609833 - 29609762
Alignment:
Q  68 aatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  29609833 aatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaattgatgtacaaatatcattgctctaa 29609762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 33881662 - 33881593
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  33881662 caatcaaaagagaggaaaacaaagttgtcaccaaaattatcattaaatgaatgtacaaatatcattgctc 33881593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 17157247 - 17157316
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| || ||| ||||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  17157247 caatcaaaagagagaaaagcaaagttatcaccaaagttgtcattaaattgatgtacaaatatcattgctc 17157316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 26041439 - 26041493
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  26041439 aaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatcattgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 27164779 - 27164725
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  27164779 aaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctc 27164725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 30402148 - 30402081
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||| |||||||||  |||||||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  30402148 caataaaaagaaag--aaacaaagttgtcaccaaaattatcatgaaatagatgtacaaatatcattgctc 30402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 16645623 - 16645554
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||||||| |||||| |||| || |||||||||| ||| ||||||||||||||||    
T  16645623 caatcaaaagagaggaaaacaaaattgtcaacaaagttatcattaaatgaatggacaaatatcattgctc 16645554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 17619984 - 17619915
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||||||| |||||| |||| || |||||||||| ||| ||||||||||||||||    
T  17619984 caatcaaaagagaggaaaacaaaattgtcaacaaagttatcattaaatgaatggacaaatatcattgctc 17619915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 42060771 - 42060836
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| || ||  |||||||||||||||| |||||||||||| |||||||||||||||||    
T  42060771 caatcaaaagagagaaaggcaaagttgtcaccaaagttgtcattaaatagatgtacaaatatcatt 42060836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 116750 - 116814
Alignment:
Q  72 aaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||| |||||||  ||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  116750 aaaagaaagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 44511268 - 44511323
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  44511268 aaaacaaaattgtcactaaagttgtcataaaatggatgtacaaatatcattgctct 44511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 3344991 - 3345044
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  3344991 aaaacaaggttgtcttcaaaattgtcattaaatgaatgtacaaatatcattgct 3345044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 33050313 - 33050366
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  33050313 aaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 33050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 10014912 - 10014840
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||| |||||| || |||||||| ||||||||||| ||||||| || ||||||||||||||||| | ||||||    
T  10014912 caataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatatcactactctaa 10014840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 20406670 - 20406726
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||||||||||||| || || |||| ||||||||||||| |||||||||||||||||    
T  20406670 aaaacaaagttgtcgccgaagttgttattaaatggatgtccaaatatcattgctcta 20406726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 35004185 - 35004130
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||  ||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  35004185 aaaacaagattgtcactaaagttgtcataaaatggatgtacaaatatcattgctct 35004130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 2347009 - 2346947
Alignment:
Q  74 aagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||| || |||||||| ||| ||||||| ||||| ||||||||||||||||||||    
T  2347009 aagaaagaaaaataaggttgtcactaaagttgtcataaaatgaatgtacaaatatcattgctc 2346947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 8742494 - 8742560
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| | |||| || ||||||| |||||||||||| ||||||| || |||||||||||||||||    
T  8742494 gatcaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 8742560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 25614763 - 25614713
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||| |||||||||||||||||||| || | |||||||||||||||||    
T  25614763 aaaacaaggttgtcaccaaaattgtcatcaattagatgtacaaatatcatt 25614713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 29162239 - 29162165
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||| |||||| || |||||||  ||||||| ||| |||||||  |||| ||||||||||||||||||||||    
T  29162239 gatcaataaaaagagagaaaaacaagattgtcactaaagttgtcatggaatgaatgtacaaatatcattgctcta 29162165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 30864359 - 30864305
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||    
T  30864359 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 30864305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 39369431 - 39369485
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||| ||| ||||| ||||||||||||  ||||||||||||||    
T  39369431 aaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctc 39369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 1838401 - 1838353
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| |||||||||||| ||||||| || |||||||||||||||||    
T  1838401 aaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 1838353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 32044910 - 32044966
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||| ||||||| ||| ||||| ||||||||||||  |||||||||||||||||    
T  32044910 aaacaaaattgtcactaaagttgtccttaaatggatgtcaaaatatcattgctctaa 32044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 37899235 - 37899287
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| ||||||||||  |||||||||| ||||||||||| ||||||    
T  37899235 aaagttgtcacaaaaattgtcacaaaatggatgttcaaatatcatttctctaa 37899287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 47530241 - 47530185
Alignment:
Q  74 aagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| ||||||| ||| |||||||| ||||||| |||| |||||||||||||||    
T  47530241 aagaaagaaaaacaaggttatcaccaaagttgtcatgaaatagatgtacaaatatca 47530185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 38978621 - 38978675
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| |||||||| ||| ||||||| ||| |||||||||||||||||||||||    
T  38978621 aaaacaaggttgtcactaaagttgtcatgaaa-ggatgtacaaatatcattgctct 38978675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 37385173 - 37385127
Alignment:
Q  84 aacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||| |||||||||||| ||||||| || |||||||||||||||||    
T  37385173 aacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatca 37385127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 41893964 - 41893914
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||| ||||    
T  41893964 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 41893914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 42431852 - 42431902
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||    
T  42431852 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcatt 42431902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 46456597 - 46456555
Alignment:
Q  94 tcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  46456597 tcaccaaagttgtcattaaataaatgtacaaatatcattgctc 46456555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 6269415 - 6269370
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| |||||||| || |||||| |||||||||||||||    
T  6269415 aaagttgtcacaaaaattgttataaaatggttgtacaaatatcatt 6269370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 23330037 - 23330090
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||| |||||||||||||||  || |||||| || |||||||||||||||||    
T  23330037 aaacaaggttgtcaccaaaatttccaataaatgaatatacaaatatcattgctc 23330090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 37899372 - 37899320
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| ||| ||||||  |||||||||| ||||||||||| ||||||    
T  37899372 aaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctctaa 37899320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 42476510 - 42476462
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| |||||| ||||| ||||||| || |||||||||||||||||    
T  42476510 aaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatca 42476462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 11089691 - 11089761
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11089691 caatcaaaaaagagaaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 11089761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 43587755 - 43587825
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  43587755 caatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatatacaaatatcattgctct 43587825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 38504284 - 38504353
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  38504284 caatcaaaagagagaaaaacaaaattgtcaccaaaattgtaattaaatggatgtacaaatatcattgctc 38504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 43602380 - 43602311
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43602380 caatcaaaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 43602311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 34972176 - 34972248
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||| | || |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||    
T  34972176 gatcaatcaaaaaagagaaaaacaaaattgtcaccaaagttgtcattaaatagatgtacaaatatcattgctc 34972248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 6105392 - 6105323
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||| ||||||||||| ||| ||||| |||||||||||||||| |||||||||||    
T  6105392 caatcaaaagagaggaaaataaagttgtcactaaagttgtctttaaatggatgtacaagtatcattgctc 6105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 9208114 - 9208063
Alignment:
Q  88 aagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  9208114 aagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctctaa 9208063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 12783815 - 12783765
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  12783815 aaagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctct 12783765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 30927873 - 30927819
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  30927873 aaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 11139010 - 11139083
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaac 140  Q
    |||| |||||| || |||||||||||||||||||| ||||||| || | ||||||||||||||| | |||||||    
T  11139010 caataaaaagatagaaaaacaaagttgtcaccaaagttgtcatcaatttgatgtacaaatatcactactctaac 11139083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 36593728 - 36593672
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||||    
T  36593728 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctcta 36593672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 31596995 - 31596944
Alignment:
Q  89 agttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaac 140  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||| |||||||    
T  31596995 agttgtcacaaaaattgtcataaaatggatgttcaaatatcatttctctaac 31596944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 30129542 - 30129592
Alignment:
Q  86 caaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||| ||||||| || ||||||||||||||||| |||||    
T  30129542 caaagttgtcaccaaagttgtcatcaattggatgtacaaatatcactgctc 30129592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 19723148 - 19723091
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||| |||||||| ||| ||||||| | || ||||||||||||||||||||||||    
T  19723148 aaaacaaggttgtcactaaagttgtcatgatatagatgtacaaatatcattgctctaa 19723091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 6656299 - 6656227
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| | |||| || ||||||| |||||||| |||||| ||||  |||||||||||||||| ||||||||    
T  6656299 gatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaataccattgctc 6656227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 6736701 - 6736629
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| | |||| || ||||||| |||||||| |||||| ||||  |||||||||||||||| ||||||||    
T  6736701 gatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaataccattgctc 6736629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 37568559 - 37568499
Alignment:
Q  77 aaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| ||||||| |||||||| ||| || | || |||||||||||||||||||||||||||    
T  37568559 aaagaaaaacaatgttgtcactaaagttataatgaaatggatgtacaaatatcattgctct 37568499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 1065546 - 1065601
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| ||| |||| ||| |||||||  ||||||||||||||||||||||||||    
T  1065546 aaaacaaggttatcactaaagttgtcatggaatggatgtacaaatatcattgctct 1065601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 6745976 - 6745929
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||| |||||||||||  |||||||||||||||| |||||||||    
T  6745976 gttgtcactaaaattgtcatggaatggatgtacaaataccattgctct 6745929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 14228822 - 14228877
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| ||| ||||||| |||||| |||| ||||||||||||| |||||||||||||    
T  14228822 aaaataaaattgtcactaaaattatcatgaaatggatgtacatatatcattgctct 14228877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 29509399 - 29509438
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  29509399 caaagttgtcattaaatgaatgtacaaatatcattgctct 29509438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 41273644 - 41273699
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| ||||| || ||| |||||||  ||||||||||||||||||||||||||    
T  41273644 aaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctct 41273699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 4658285 - 4658335
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||| ||||    
T  4658285 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 27630934 - 27630896
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  27630934 aaaattgtcataaaatggatgtacaaatatcatttctct 27630896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 33817271 - 33817337
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    |||| |||||| || |||||||  ||||||| |||||||| || |||| ||||||||||||||||||    
T  33817271 caataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatcattg 33817337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 41659371 - 41659417
Alignment:
Q  86 caaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    |||| ||||||| |||||| ||||||||||||||| |||||||||||    
T  41659371 caaaattgtcacaaaaattatcattaaatggatgttcaaatatcatt 41659417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 9314448 - 9314415
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||||||||||||||||||||||    
T  9314448 aaaattgtcataaaatggatgtacaaatatcatt 9314415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 20895927 - 20895894
Alignment:
Q  103 ttgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| ||||||||||||||||||||||||||    
T  20895927 ttgtcatgaaatggatgtacaaatatcattgctc 20895894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 36426042 - 36426087
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||| |||||||||||| |||||||||||    
T  36426042 aaagttgtcacaaaagttgtctttaaatggatgttcaaatatcatt 36426087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 39258980 - 39258943
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||  |||||||||||||||||||||||||    
T  39258980 aaaattgtcatggaatggatgtacaaatatcattgctc 39258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 41293658 - 41293613
Alignment:
Q  88 aagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    |||||||||| ||| |||||||  ||||||||||||||||||||||    
T  41293658 aagttgtcactaaagttgtcatggaatggatgtacaaatatcattg 41293613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 2597102 - 2597054
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| |||||||||||| ||||||| || || ||||||||||||||    
T  2597102 aaaacaaggttgtcaccaaagttgtcatcaattgaatgtacaaatatca 2597054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 3946289 - 3946237
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| ||| ||||||  |||||||||| ||||||||||| ||||||    
T  3946289 aaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctctaa 3946237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 13565465 - 13565405
Alignment:
Q  77 aaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| ||| ||| |||||||  ||| |||| ||||||| ||||||||||||||||||||||    
T  13565465 aaagaaaagcaaggttgtcattaaagttgtgattaaattgatgtacaaatatcattgctct 13565405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 32185604 - 32185564
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||| |||||||  |||||||||||||||||||||||||||    
T  32185604 caaagttgtcatgtaatggatgtacaaatatcattgctcta 32185564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 34970334 - 34970390
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||||||||| || ||| ||||| ||||||| ||||  ||||||||||||||||    
T  34970334 aaaacaaagttgttactaaagttgtccttaaatgaatgtcaaaatatcattgctcta 34970390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 37562083 - 37562035
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| ||||||| |||| ||||||| || |||||||||||||||||    
T  37562083 aaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatatca 37562035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 7077296 - 7077227
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7077296 caatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 7077227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 26685807 - 26685874
Alignment:
Q  69 atcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||| ||||||||||| |||| |||||| || ||||||||| |||||||||||||||||||||    
T  26685807 atcaaaagagaggaaaacaaaattgtgaccaaagttatcattaaatagatgtacaaatatcattgctc 26685874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 26955538 - 26955605
Alignment:
Q  69 atcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||| ||||||||||| |||| |||||| || ||||||||| |||||||||||||||||||||    
T  26955538 atcaaaagagaggaaaacaaaattgtgaccaaagttatcattaaatagatgtacaaatatcattgctc 26955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 30574319 - 30574264
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  30574319 aaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctct 30574264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 36548339 - 36548267
Alignment:
Q  65 atcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||| |||| | || ||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  36548339 atcaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatggatgtacaaatatcattgctct 36548267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 4292912 - 4292968
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||||||| |||||    
T  4292912 aaaacaaagttgtcaacaaaattgtcatcaaatgaatgtccaaatatcattactcta 4292968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 12417758 - 12417810
Alignment:
Q  85 acaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||||||||| ||||| | |||| ||||||||||||||||||||||    
T  12417758 acaaagttgtcaccaaagttgtcgtgaaatagatgtacaaatatcattgctct 12417810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 10372229 - 10372182
Alignment:
Q  85 acaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  10372229 acaatgttgtcaccaaagttgtcattaaatgaatgtacaaatatcatt 10372182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 19271988 - 19272043
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| |||| |||||||||||  ||| ||||||||||||||||||||||    
T  19271988 aaaacaaagttatcactaaaattgtcatataatagatgtacaaatatcattgctct 19272043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 38011001 - 38011056
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||| ||||||| |||||||||||  ||| ||||||||||||||||||||||    
T  38011001 aaaacaaaattgtcactaaaattgtcatggaatagatgtacaaatatcattgctct 38011056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 3263450 - 3263396
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||    
T  3263450 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 3263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 11464080 - 11464010
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| |||||| || ||||||| |||||||| ||| |||| ||  ||||||||||||||||||||||||||    
T  11464080 caataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctct 11464010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 15622173 - 15622227
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||    
T  15622173 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 15622227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 31006190 - 31006228
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  31006190 caaagttgtcattaaatggatgtacaaatatcattgctc 31006228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 3154595 - 3154530
Alignment:
Q  72 aaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||| || |||| ||||||||||||||||||||||| || |  |||||||||||||||| ||||    
T  3154595 aaaagagagaaaaataaagttgtcaccaaaattgtcatcaattaaatgtacaaatatcattactct 3154530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 28501763 - 28501812
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| ||||||||||| |||| |||||| ||||||||||||||    
T  28501763 aaagttgtcactaaaattgtcatgaaattgatgtataaatatcattgctc 28501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 4088492 - 4088440
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| ||| |||| || |||||||||||||||||||||| ||||||    
T  4088492 aaagttgtcacaaaagttgttataaaatggatgtacaaatatcatttctctaa 4088440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 32634837 - 32634893
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||||||| || |||| |||||||||||  |||||||||||||||||||||| ||||    
T  32634837 aaaacaaaattatcactaaaattgtcatggaatggatgtacaaatatcattgatcta 32634893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 35972698 - 35972754
Alignment:
Q  81 gaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||| || ||||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  35972698 gaaaataaggttgtcaccaaaattatcaataaattgatgtacaaatatgattgctct 35972754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 372672 - 372605
Alignment:
Q  72 aaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||| || ||| ||| ||||||||||||||| |||| || ||||||||||||||||| | ||||||    
T  372672 aaaagatagaaaagcaaggttgtcaccaaaattatcatcaattggatgtacaaatatcactactctaa 372605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 8959274 - 8959337
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||| |||||| || ||||||| |||||| ||||| ||||||| || |||||||||||||||||    
T  8959274 caataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatca 8959337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 9594615 - 9594662
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  9594615 gttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 9594662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 12512922 - 12512977
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||  ||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  12512922 aaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 12512977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 33823636 - 33823585
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    ||||||| |||||||| ||| |||||||  ||||||||||||||||||||||    
T  33823636 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattg 33823585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 41192720 - 41192759
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  41192720 caaagttgtaattaaatggatgtacaaatatcattgctct 41192759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 15917963 - 15917913
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||| | ||| |||||||  ||||||||||||||||||||||||||    
T  15917963 aaagttgtcgctaaagttgtcatggaatggatgtacaaatatcattgctct 15917913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 17402944 - 17402994
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||||||||||  |||||||||| ||||||||||| ||||    
T  17402944 aaagttgtcacaaaaattgtcaccaaatggatgttcaaatatcatttctct 17402994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 19840008 - 19840058
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||||||||||| ||||| |||| ||||||||||| ||||    
T  19840008 aaagttgtcacaaaaattgtcataaaatgaatgttcaaatatcatttctct 19840058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 21012617 - 21012567
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||| ||||    
T  21012617 aaagttgtcacaaaaattgtcataaaatggttgtacaaatataatttctct 21012567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 30776749 - 30776803
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| ||||||| ||| ||||||| ||||  |||||||||||||||||||||    
T  30776749 aaacaaatttgtcactaaatttgtcatgaaataaatgtacaaatatcattgctct 30776803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 6517761 - 6517716
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  6517761 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 6517716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 9599689 - 9599656
Alignment:
Q  103 ttgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| ||||||||||||||||||||||||||    
T  9599689 ttgtcataaaatggatgtacaaatatcattgctc 9599656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 10649484 - 10649439
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  10649484 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 10649439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 25345476 - 25345521
Alignment:
Q  91 ttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||  |||||||||||||||||||||||||    
T  25345476 ttgtcactaaaattgttatggaatggatgtacaaatatcattgctc 25345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 189725 - 189777
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| ||| || |||| |||||||||| ||||||||||| ||||||    
T  189725 aaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctctaa 189777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 6940172 - 6940224
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| |||||| | || |||||| ||||||||||||||| ||||||    
T  6940172 aaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctctaa 6940224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 8267854 - 8267894
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||||||| ||||||||||| ||||||||||| ||||||    
T  8267854 aaaattgtcactaaatggatgttcaaatatcatttctctaa 8267894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 17489477 - 17489525
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||||||  ||||||||||| ||||||| || |||||||||||||||||    
T  17489477 aaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatatca 17489525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 30413689 - 30413620
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30413689 caatcaaaagagagaaaagcaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 30413620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 12175285 - 12175217
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||  |||||||||||||||||||    
T  12175285 caatcaaaagagaggaaaacaaagttgtcaccaaagttatcattaaataaatgtacaaatatcattgct 12175217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 4097073 - 4097129
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  4097073 aaaacaaggttgtcaccaaaattgttattaaatggatggacaaatatcattgctcta 4097129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 36582385 - 36582440
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  36582385 aaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatcattgctct 36582440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 33003935 - 33004009
Alignment:
Q  65 atcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||| |||| | ||||||| || ||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  33003935 atcaataaaaacagaggaaaaaaaggttatcaccaaagttgtcattaaaaggatgtacaaatatcattgctctaa 33004009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 6885039 - 6885094
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||    
T  6885039 aaaacaaagttgtcactaaagttgtcatgaaatgaatgtacaaatatcattgctct 6885094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 38021470 - 38021540
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||||||| ||  ||||||| ||||||||||| || ||||||||| |||||||||||||||||||||||    
T  38021470 caatcaaaagagagagaaacaaaattgtcaccaaagttatcattaaat-gatgtacaaatatcattgctcta 38021540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 44484598 - 44484544
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||    
T  44484598 aaaacaaagttgtcactaaagttgtcataaaattgatgtacaaatatcattgctc 44484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 33030044 - 33029987
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||| ||||||| |||| ||||||||| || ||||||||||||||||||||||||    
T  33030044 aaaacaaggttgtcatcaaagttgtcattagatagatgtacaaatatcattgctctaa 33029987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 4061983 - 4062031
Alignment:
Q  89 agttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  4061983 agttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctct 4062031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 10550401 - 10550345
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||||||||||| |||| ||||||| |||||||||| ||||||||||| |||||    
T  10550401 aaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactcta 10550345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 22353114 - 22353066
Alignment:
Q  85 acaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  22353114 acaaggttatcaccaaaattatcattaaatggatgtacaaatatcattg 22353066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 37966485 - 37966536
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    ||||||| |||||||| ||| ||||||| |||||||||||||||||||||||    
T  37966485 aaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattg 37966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 43936402 - 43936348
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||    
T  43936402 aaaacaaaattatcaccaaaattgtgattaaatg-atgtacaaatatcattgctct 43936348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 6851597 - 6851559
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  6851597 caaagttgtcattaaatggatgtacaaatatcattgctc 6851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 23048025 - 23047971
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||    
T  23048025 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 23047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 29871296 - 29871242
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||||||||||| ||||||| |||| |||| ||||||||||| |||||    
T  29871296 aaacaaagttgtcaccaaagttgtcatgaaatagatggacaaatatcatggctct 29871242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 12358427 - 12358496
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||| |||||| || ||| ||| |||||||||||| ||||||| || ||||||||||||||||| |||||    
T  12358427 caataaaaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactgctc 12358496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 15269910 - 15269865
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||    
T  15269910 aaagttgtcacaaaaattgtcataaaatggatgttcaaatatcatt 15269865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 9458524 - 9458580
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||| ||||||||| | |||||||||||||||||| | ||||||||||||| |||||    
T  9458524 aaaataaagttgtcgcaaaaattgtcattaaatggttatacaaatatcattactcta 9458580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 38246692 - 38246636
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||| |||||||| ||| |||||||  ||| ||||||||||||||||||||||||    
T  38246692 aaacaaggttgtcactaaagttgtcatggaattgatgtacaaatatcattgctctaa 38246636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 3196029 - 3195974
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| ||||| || ||| |||||||  ||||||||||||||||||||||||||    
T  3196029 aaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctct 3195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 137
Target Start/End: Original strand, 27540156 - 27540187
Alignment:
Q  106 tcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||||||||||||||||||||||||    
T  27540156 tcattaaatggatgtacaaatatcattgctct 27540187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 43666701 - 43666752
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||||| |||||    
T  43666701 aaagttgtcacaaaagttgtcgttaaatggatgttcaaatatcatttctcta 43666752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 45372602 - 45372641
Alignment:
Q  93 gtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  45372602 gtcaccaaagttgtcattaaatgaatgtacaaatatcatt 45372641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 1095859 - 1095897
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  1095859 aaaattgtcataaaatggatgtacaaatatcatttctct 1095897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 9634458 - 9634508
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| |||||| |||| |||||||||| ||||||||||| ||||    
T  9634458 aaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctct 9634508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 33857346 - 33857400
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||| ||||||||||||||| ||||| |||||| |||||  ||||||||||||||    
T  33857346 aaaataaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcattgctc 33857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 2563753 - 2563708
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  2563753 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 2563708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 3299038 - 3298993
Alignment:
Q  91 ttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||| ||||||||| |||||| || |||||||||||    
T  3299038 ttgtcaccaaaattatcattaaatagatgtataattatcattgctc 3298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 6999090 - 6999135
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  6999090 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 6999135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 7502450 - 7502495
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||||||||||  |||||| |||||||||||||||    
T  7502450 aaagttgtcacaaaaattgtcaaaaaatggttgtacaaatatcatt 7502495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 13765449 - 13765404
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  13765449 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 13765404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 22526016 - 22526061
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||||||||||  |||||||||| |||||||||||    
T  22526016 aaagttgtcacaaaaattgtcaaaaaatggatgttcaaatatcatt 22526061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 23391173 - 23391246
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| | |||| || |||||||||||||| | ||| || ||||  ||||||||||||||||||||| ||||    
T  23391173 gatcaataagaagagagaaaaacaaagttgtcgctaaagttatcatggaatggatgtacaaatatcattcctct 23391246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 30487373 - 30487336
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||  |||||||||||||||||||||||||    
T  30487373 aaaattgtcatagaatggatgtacaaatatcattgctc 30487336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 37105690 - 37105645
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| |||||| |||| |||||||||| |||||||||||    
T  37105690 aaagttgtcacaaaaattatcataaaatggatgttcaaatatcatt 37105645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 45259307 - 45259352
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| |||||||| |  ||||||||||||||||||||||    
T  45259307 aaagttgtcacaaaaattgttagaaaatggatgtacaaatatcatt 45259352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 5962767 - 5962815
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||||||| ||||||||||| |||| || | |||||||||||||||    
T  5962767 aaaacaaagttatcaccaaaattatcatcaattagatgtacaaatatca 5962815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 29893721 - 29893793
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||| | |||| || |||||||| ||||||| ||| || ||||  ||||||| |||||||||||||||||    
T  29893721 gatcaataagaagagagaaaaacaaaattgtcactaaacttatcatagaatggatatacaaatatcattgctc 29893793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 36909785 - 36909738
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||||||||||| |||| |||| || ||||||||||||||||||||    
T  36909785 aaaacaaagttgtcatcaaagttgt-atgaaatggatgtacaaatatca 36909738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 5383873 - 5383946
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaac 140  Q
    ||||||||||| || |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  5383873 caatcaaaagagagaaaaacaaagttgtcaccaaagttgtaattaaatggatgtacaaatatcattgctctaac 5383946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 49189168 - 49189102
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  49189168 caatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtacaaatatcattg 49189102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 37669512 - 37669583
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||||| | |||| ||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  37669512 caatcaaaaaagaggagaacaaagttgtcaccgaaattatcattaaatgaatgtacaaatatcattgctcta 37669583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 10385528 - 10385598
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||| | || ||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  10385528 caatcaaaaaagagaaaagcaaaattgtcaccaaagttatcattaaatggatgtacaaatatcattgctct 10385598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 19920891 - 19920946
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||||||||||||| ||||| ||||||||||||  |||||||||||||||    
T  19920891 aaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctct 19920946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 24749669 - 24749627
Alignment:
Q  97 ccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  24749669 ccaaaattgttattaaatggatgtacaaatatcattgctctaa 24749627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 50777365 - 50777315
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||| |||||||||||||||||||| || |||||||||||||||||||    
T  50777365 aaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaatatcatt 50777315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 43196046 - 43195977
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||| || | | ||||||| |||||||| |||||||||||| ||||||||||||| |||||||    
T  43196046 caatcaaaagagagaacatcaaagttatcaccaaagttgtcattaaatagatgtacaaatattattgctc 43195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 27563617 - 27563652
Alignment:
Q  98 caaaattgtcattaaatggatgtacaaatatcattg 133  Q
    ||||||||||||||||||||||||||||||||||||    
T  27563617 caaaattgtcattaaatggatgtacaaatatcattg 27563652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 50035480 - 50035426
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||| ||||||||||| ||| ||||||| |||| |||||||||||||||||||||    
T  50035480 aaaataaagttgtcactaaagttgtcatgaaatagatgtacaaatatcattgctc 50035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 27578311 - 27578367
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||| ||||| || |||||||||||  |||| ||||||||||||||||||||||    
T  27578311 aaaacaaggttgttactaaaattgtcatggaatgaatgtacaaatatcattgctcta 27578367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 42843286 - 42843238
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    ||||||| ||||||||||||||| |||| || |||||||||||||||||    
T  42843286 aaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatatca 42843238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 46902732 - 46902780
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatca 130  Q
    |||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  46902732 aaaaaaaagttgtcactaaaattgtcatcaattggatgtacaaatatca 46902780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 6829727 - 6829672
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||  ||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  6829727 aaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 6829672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 7171258 - 7171309
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||||||| ||| |||||||||||| ||||| ||||||||||| |||||    
T  7171258 aaagttgtcacaaaagttgtcattaaatagatgttcaaatatcatttctcta 7171309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 13813687 - 13813742
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| |||||||| ||| |||| ||  ||||||||||||||||||||||||||    
T  13813687 aaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctct 13813742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 25130832 - 25130887
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| |||||||| ||| ||||||| |||| ||||||||||||||| ||||||    
T  25130832 aaaacaaggttgtcactaaagttgtcatgaaatagatgtacaaatatcactgctct 25130887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 29489309 - 29489246
Alignment:
Q  74 aagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| ||||||| |||||||| ||| ||||||| ||||  |||||||||||||| ||||||    
T  29489309 aagaaagaaaaacaaggttgtcactaaagttgtcatgaaatatatgtacaaatatcactgctct 29489246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 9011774 - 9011824
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    |||||||  ||||||| || |||||||| ||||||||||||||||||||||    
T  9011774 aaaacaagattgtcactaacattgtcatgaaatggatgtacaaatatcatt 9011824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 10890068 - 10890118
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||| ||||    
T  10890068 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 10890118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 11947844 - 11947794
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||| ||||||| |||||| ||||||||||||||| ||||    
T  11947844 aaagttgtcacaaaagttgtcataaaatggttgtacaaatatcatttctct 11947794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 15705084 - 15705134
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||| ||||    
T  15705084 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 15705134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 27895703 - 27895649
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||| ||| ||||| ||||||| ||||  ||||||||||||||    
T  27895703 aaaacaaagttgtcactaaagttgtccttaaatgaatgtcaaaatatcattgctc 27895649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 29877064 - 29877018
Alignment:
Q  91 ttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||| |||| ||||||||||||  |||||||||||||||||||||    
T  29877064 ttgtcaacaaagttgtcattaaataaatgtacaaatatcattgctct 29877018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 51704720 - 51704686
Alignment:
Q  103 ttgtcattaaatggatgtacaaatatcattgctct 137  Q
    |||||||||||||||| ||||||||||||||||||    
T  51704720 ttgtcattaaatggatatacaaatatcattgctct 51704686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 52362531 - 52362481
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||| ||||    
T  52362531 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 52362481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 13489711 - 13489666
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  13489711 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 13489666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 17167882 - 17167846
Alignment:
Q  103 ttgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  17167882 ttgtcataaaatggatgtacaaatatcatttctctaa 17167846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 42256598 - 42256630
Alignment:
Q  103 ttgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||||| |||||||||||||||||||||||||    
T  42256598 ttgtcatgaaatggatgtacaaatatcattgct 42256630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 47214257 - 47214205
Alignment:
Q  87 aaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||||||| ||| ||||||| |||| ||||| ||||||||||| ||||||    
T  47214257 aaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctctaa 47214205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 51193165 - 51193205
Alignment:
Q  99 aaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||||| || |||||||||||||||||||||| ||||||    
T  51193165 aaaattgttataaaatggatgtacaaatatcatttctctaa 51193205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 17105 - 17158
Alignment:
Q  83 aaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17105 aaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 35450 - 35382
Alignment:
Q  67 caatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgct 135  Q
    ||||||||||| ||||||||||| || || |||||||||||||||||| ||||||||||||||||||||    
T  35450 caatcaaaagagaggaaaacaaaattttctccaaaattgtcattaaatagatgtacaaatatcattgct 35382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 1438 - 1381
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  1438 aaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcattgctctaa 1381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 29894 - 29963
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattg 133  Q
    ||||||| |||||| || ||||||| ||||| || ||| |||||||||||||||||||||||||||||||    
T  29894 gatcaataaaaagagagaaaaacaaggttgtaactaaagttgtcattaaatggatgtacaaatatcattg 29963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 249102 - 249029
Alignment:
Q  64 gatcaatcaaaagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctct 137  Q
    ||||||| | |||| || ||||||| |||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  249102 gatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 249029  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 147198 - 147142
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    ||||||| |||||||| ||| |||||||  |||||||||||||||||||||||||||    
T  147198 aaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctcta 147142  T

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Target: scaffold0085 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 31242 - 31188
Alignment:
Q  82 aaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||||| |||||| ||||  ||| |||||||||||||||||||||    
T  31242 aaaacaaagttgtcactaaaattatcatgtaatagatgtacaaatatcattgctc 31188  T

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Target: scaffold0618 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 3482 - 3547
Alignment:
Q  74 aagaaaggaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctctaa 139  Q
    ||||||| |||| || |||||||| ||| ||||| | ||||| |||||||||||||||||||||||    
T  3482 aagaaagaaaaataaggttgtcactaaagttgtcgtgaaatgaatgtacaaatatcattgctctaa 3547  T

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Target: scaffold0522 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 2437 - 2392
Alignment:
Q  91 ttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctc 136  Q
    |||||||||||||| |||| || |||||||||||||||||||||||    
T  2437 ttgtcaccaaaattatcatcaattggatgtacaaatatcattgctc 2392  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 5212 - 5258
Alignment:
Q  86 caaagttgtcaccaaaattgtcattaaatggatgtacaaatatcatt 132  Q
    ||||||||||||||||||||||| || || ||| |||||||||||||    
T  5212 caaagttgtcaccaaaattgtcactatatagatatacaaatatcatt 5258  T

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Target: scaffold0193 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 24810 - 24858
Alignment:
Q  90 gttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcta 138  Q
    |||||||| |||||| |||| |||| |||||||||||||| ||||||||    
T  24810 gttgtcactaaaattatcatgaaatagatgtacaaatatcgttgctcta 24858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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