View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3879_low_14 (Length: 475)

Name: NF3879_low_14
Description: NF3879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3879_low_14
NF3879_low_14
[»] scaffold0062 (2 HSPs)
scaffold0062 (13-344)||(43090-43421)
scaffold0062 (411-475)||(43488-43552)
[»] chr7 (62 HSPs)
chr7 (16-227)||(7318295-7318507)
chr7 (23-227)||(17153027-17153231)
chr7 (16-227)||(10586890-10587101)
chr7 (16-227)||(8313259-8313472)
chr7 (13-227)||(4785858-4786077)
chr7 (16-227)||(3734618-3734829)
chr7 (23-227)||(15869617-15869820)
chr7 (16-227)||(9574429-9574639)
chr7 (55-227)||(4818858-4819033)
chr7 (81-227)||(4986577-4986723)
chr7 (81-227)||(4990675-4990821)
chr7 (55-231)||(7492168-7492344)
chr7 (21-218)||(18662472-18662667)
chr7 (13-227)||(16365727-16365942)
chr7 (60-227)||(1584566-1584731)
chr7 (55-218)||(9731532-9731695)
chr7 (16-231)||(6013611-6013825)
chr7 (150-223)||(13759860-13759933)
chr7 (151-227)||(9864327-9864403)
chr7 (24-218)||(1587712-1587904)
chr7 (13-107)||(5108706-5108801)
chr7 (55-227)||(3329562-3329735)
chr7 (55-115)||(7397275-7397335)
chr7 (55-227)||(8978911-8979083)
chr7 (150-226)||(11803103-11803179)
chr7 (19-115)||(14195842-14195937)
chr7 (13-227)||(2563840-2564054)
chr7 (23-225)||(3190935-3191134)
chr7 (55-110)||(19153434-19153489)
chr7 (55-110)||(20752833-20752888)
chr7 (55-121)||(16297739-16297805)
chr7 (13-110)||(6042589-6042685)
chr7 (16-121)||(17829697-17829801)
chr7 (56-227)||(10648600-10648770)
chr7 (55-110)||(20582394-20582449)
chr7 (13-115)||(1848091-1848193)
chr7 (68-114)||(140251-140297)
chr7 (73-163)||(1584318-1584407)
chr7 (56-106)||(8293948-8293997)
chr7 (55-109)||(18368884-18368938)
chr7 (150-226)||(11221164-11221240)
chr7 (55-110)||(39273081-39273137)
chr7 (55-110)||(9131049-9131104)
chr7 (150-227)||(1848227-1848304)
chr7 (26-110)||(13418660-13418744)
chr7 (150-227)||(18368980-18369057)
chr7 (55-115)||(6006073-6006131)
chr7 (155-231)||(14755135-14755211)
chr7 (55-110)||(17191119-17191175)
chr7 (133-218)||(13418565-13418653)
chr7 (168-226)||(18467474-18467532)
chr7 (150-223)||(8054489-8054562)
chr7 (77-110)||(8877559-8877592)
chr7 (59-107)||(16058942-16058991)
chr7 (150-231)||(17203042-17203122)
chr7 (151-227)||(5530043-5530119)
chr7 (24-103)||(8053937-8054016)
chr7 (151-227)||(9500466-9500542)
chr7 (151-231)||(10584487-10584567)
chr7 (55-110)||(13289324-13289380)
chr7 (151-227)||(16306716-16306792)
chr7 (168-224)||(31492955-31493011)
[»] chr8 (34 HSPs)
chr8 (23-223)||(25182301-25182501)
chr8 (16-211)||(13697893-13698086)
chr8 (22-227)||(19786753-19786958)
chr8 (55-227)||(14528171-14528342)
chr8 (19-227)||(34497137-34497345)
chr8 (13-227)||(13314856-13315069)
chr8 (148-231)||(2637616-2637699)
chr8 (56-225)||(6884982-6885150)
chr8 (96-231)||(30806438-30806578)
chr8 (151-231)||(17976637-17976717)
chr8 (55-110)||(18448447-18448502)
chr8 (150-232)||(21314640-21314722)
chr8 (57-115)||(44010931-44010989)
chr8 (150-227)||(24114282-24114359)
chr8 (150-227)||(29382361-29382438)
chr8 (151-223)||(24904659-24904731)
chr8 (23-110)||(24269735-24269822)
chr8 (16-114)||(7983716-7983813)
chr8 (55-115)||(24644971-24645034)
chr8 (55-110)||(27659573-27659629)
chr8 (55-110)||(29382266-29382322)
chr8 (16-111)||(30122020-30122115)
chr8 (133-227)||(17509268-17509365)
chr8 (55-107)||(17101810-17101863)
chr8 (150-226)||(27659468-27659544)
chr8 (152-215)||(15238833-15238896)
chr8 (168-227)||(17101911-17101970)
chr8 (168-227)||(24269620-24269678)
chr8 (19-109)||(9642018-9642107)
chr8 (195-229)||(23893246-23893280)
chr8 (13-94)||(26394562-26394643)
chr8 (68-110)||(28276677-28276719)
chr8 (55-110)||(23893119-23893174)
chr8 (151-227)||(30122156-30122231)
[»] chr2 (39 HSPs)
chr2 (16-227)||(32085485-32085695)
chr2 (13-211)||(28606041-28606239)
chr2 (69-227)||(20174554-20174712)
chr2 (13-227)||(25618578-25618791)
chr2 (55-227)||(29719137-29719308)
chr2 (55-163)||(29027582-29027689)
chr2 (13-110)||(25887766-25887864)
chr2 (13-110)||(26603223-26603320)
chr2 (55-227)||(15339260-15339432)
chr2 (55-223)||(13776365-13776532)
chr2 (55-227)||(17349379-17349542)
chr2 (23-110)||(17890076-17890162)
chr2 (13-110)||(27908981-27909079)
chr2 (13-110)||(30411805-30411903)
chr2 (77-227)||(45621809-45621958)
chr2 (150-227)||(17743476-17743553)
chr2 (150-227)||(25196032-25196109)
chr2 (19-111)||(23933415-23933506)
chr2 (55-223)||(11382658-11382826)
chr2 (24-110)||(25920391-25920478)
chr2 (24-110)||(29143088-29143174)
chr2 (58-227)||(17635683-17635852)
chr2 (45-110)||(17675524-17675589)
chr2 (23-227)||(23011637-23011839)
chr2 (150-231)||(12953294-12953375)
chr2 (57-110)||(45553268-45553320)
chr2 (174-229)||(25530467-25530522)
chr2 (174-229)||(25535294-25535349)
chr2 (55-223)||(31804804-31804973)
chr2 (55-110)||(17743382-17743438)
chr2 (23-218)||(25885335-25885528)
chr2 (142-227)||(25888216-25888297)
chr2 (150-226)||(27418389-27418465)
chr2 (68-110)||(21078543-21078585)
chr2 (13-110)||(25530574-25530671)
chr2 (150-224)||(30411703-30411777)
chr2 (150-227)||(27909119-27909196)
chr2 (150-229)||(26667337-26667417)
chr2 (55-110)||(28925660-28925715)
[»] scaffold0005 (1 HSPs)
scaffold0005 (13-227)||(168162-168375)
[»] chr4 (45 HSPs)
chr4 (13-227)||(14648917-14649130)
chr4 (55-227)||(17672024-17672195)
chr4 (23-227)||(19929548-19929752)
chr4 (23-231)||(19092313-19092520)
chr4 (42-227)||(17955041-17955225)
chr4 (55-227)||(17951202-17951373)
chr4 (16-227)||(5679227-5679438)
chr4 (59-223)||(12578176-12578339)
chr4 (23-227)||(22357405-22357612)
chr4 (86-231)||(11490550-11490694)
chr4 (13-225)||(17336997-17337210)
chr4 (22-227)||(13908876-13909081)
chr4 (57-216)||(21323784-21323941)
chr4 (77-227)||(17216839-17216991)
chr4 (55-111)||(19562080-19562137)
chr4 (55-227)||(13128778-13128951)
chr4 (150-218)||(16730399-16730467)
chr4 (19-113)||(25121096-25121189)
chr4 (150-227)||(13692669-13692746)
chr4 (143-227)||(11933441-11933524)
chr4 (151-231)||(19882658-19882738)
chr4 (56-103)||(3774975-3775021)
chr4 (13-103)||(24639324-24639415)
chr4 (98-231)||(22175911-22176043)
chr4 (151-227)||(20315022-20315098)
chr4 (168-232)||(24639472-24639536)
chr4 (168-227)||(7582319-7582378)
chr4 (24-110)||(7582435-7582522)
chr4 (168-227)||(15047150-15047209)
chr4 (168-227)||(15107215-15107274)
chr4 (56-107)||(20829645-20829696)
chr4 (75-121)||(8969653-8969699)
chr4 (153-227)||(13992879-13992953)
chr4 (68-110)||(26115823-26115865)
chr4 (66-110)||(16730316-16730361)
chr4 (150-227)||(19492700-19492777)
chr4 (55-110)||(15164904-15164959)
chr4 (24-110)||(17026218-17026305)
chr4 (56-115)||(19374719-19374777)
chr4 (13-107)||(40227917-40228011)
chr4 (169-231)||(11521210-11521272)
chr4 (150-227)||(15164789-15164866)
chr4 (55-110)||(13692586-13692642)
chr4 (55-110)||(19492617-19492673)
chr4 (151-227)||(25121227-25121302)
[»] scaffold0008 (1 HSPs)
scaffold0008 (13-227)||(54882-55097)
[»] chr6 (38 HSPs)
chr6 (13-213)||(6630554-6630755)
chr6 (23-223)||(28933534-28933733)
chr6 (17-227)||(21907454-21907666)
chr6 (24-218)||(11176981-11177175)
chr6 (4-227)||(12183185-12183408)
chr6 (55-225)||(9838380-9838549)
chr6 (55-231)||(4339753-4339928)
chr6 (13-227)||(27737552-27737766)
chr6 (16-218)||(8241308-8241505)
chr6 (20-227)||(15466392-15466597)
chr6 (68-227)||(21672352-21672512)
chr6 (18-227)||(22567862-22568069)
chr6 (68-226)||(21679768-21679927)
chr6 (56-227)||(22410234-22410404)
chr6 (55-227)||(23645673-23645844)
chr6 (68-227)||(25927223-25927380)
chr6 (150-225)||(9516809-9516884)
chr6 (150-227)||(23844465-23844542)
chr6 (13-104)||(14637012-14637104)
chr6 (77-223)||(23143748-23143893)
chr6 (68-226)||(21688713-21688871)
chr6 (151-227)||(9726044-9726120)
chr6 (55-154)||(19244668-19244767)
chr6 (151-227)||(22566163-22566239)
chr6 (56-135)||(24252137-24252215)
chr6 (150-227)||(23231983-23232060)
chr6 (55-110)||(11136034-11136090)
chr6 (24-107)||(27124369-27124452)
chr6 (56-110)||(20005824-20005879)
chr6 (150-226)||(17827092-17827168)
chr6 (55-110)||(25781916-25781971)
chr6 (55-110)||(17827001-17827056)
chr6 (55-113)||(9898867-9898923)
chr6 (169-227)||(17729174-17729232)
chr6 (55-113)||(22566067-22566125)
chr6 (174-227)||(20005903-20005956)
chr6 (151-227)||(17299832-17299908)
chr6 (55-106)||(24657374-24657425)
[»] chr3 (41 HSPs)
chr3 (13-227)||(16245593-16245806)
chr3 (55-227)||(12805796-12805967)
chr3 (15-227)||(21301940-21302153)
chr3 (55-227)||(3116325-3116495)
chr3 (55-227)||(21325362-21325534)
chr3 (13-231)||(41508385-41508602)
chr3 (23-215)||(21303228-21303419)
chr3 (55-227)||(5508358-5508528)
chr3 (56-227)||(10744924-10745093)
chr3 (100-227)||(8319061-8319188)
chr3 (24-161)||(17155880-17156015)
chr3 (26-161)||(2723712-2723846)
chr3 (13-227)||(2167481-2167694)
chr3 (151-227)||(821515-821591)
chr3 (55-115)||(21825775-21825834)
chr3 (55-227)||(18736578-18736748)
chr3 (151-225)||(21825870-21825943)
chr3 (170-227)||(13908246-13908303)
chr3 (7-110)||(17438287-17438391)
chr3 (150-215)||(17438431-17438496)
chr3 (151-227)||(6289925-6290001)
chr3 (151-223)||(10917944-10918016)
chr3 (55-110)||(16229859-16229915)
chr3 (19-138)||(8445932-8446050)
chr3 (24-110)||(8765244-8765330)
chr3 (151-225)||(8557130-8557204)
chr3 (55-110)||(4650364-4650419)
chr3 (55-106)||(8170013-8170065)
chr3 (55-110)||(8770146-8770201)
chr3 (24-107)||(12754797-12754881)
chr3 (155-231)||(28728962-28729038)
chr3 (152-227)||(4650253-4650328)
chr3 (150-229)||(8889152-8889231)
chr3 (55-113)||(19908442-19908501)
chr3 (150-227)||(19171834-19171911)
chr3 (150-227)||(19925623-19925700)
chr3 (55-107)||(27413802-27413855)
chr3 (55-107)||(932884-932936)
chr3 (55-110)||(8883028-8883084)
chr3 (191-231)||(18458465-18458505)
chr3 (55-110)||(19576126-19576182)
[»] chr1 (55 HSPs)
chr1 (26-227)||(22664228-22664429)
chr1 (77-227)||(147653-147801)
chr1 (16-231)||(33190695-33190909)
chr1 (13-227)||(9787742-9787956)
chr1 (16-159)||(18100880-18101022)
chr1 (56-227)||(23037918-23038088)
chr1 (69-227)||(24281299-24281457)
chr1 (16-176)||(15807886-15808046)
chr1 (13-226)||(31235911-31236124)
chr1 (16-161)||(28008193-28008338)
chr1 (16-227)||(24214566-24214770)
chr1 (16-134)||(12012680-12012797)
chr1 (13-227)||(13345200-13345413)
chr1 (55-231)||(15813061-15813235)
chr1 (150-227)||(12208623-12208700)
chr1 (56-227)||(25405536-25405707)
chr1 (16-108)||(21973071-21973164)
chr1 (150-227)||(14779587-14779664)
chr1 (55-227)||(17359184-17359355)
chr1 (150-227)||(18736240-18736317)
chr1 (55-115)||(16360005-16360064)
chr1 (55-110)||(16916851-16916907)
chr1 (23-106)||(17610129-17610213)
chr1 (151-227)||(17837539-17837615)
chr1 (24-226)||(22620285-22620487)
chr1 (56-111)||(32382915-32382969)
chr1 (150-227)||(17610256-17610333)
chr1 (23-104)||(21334591-21334672)
chr1 (150-227)||(21666608-21666685)
chr1 (150-231)||(29242537-29242618)
chr1 (55-110)||(16179144-16179200)
chr1 (68-212)||(9401542-9401687)
chr1 (150-227)||(15543966-15544043)
chr1 (151-231)||(3591654-3591734)
chr1 (55-110)||(14781771-14781827)
chr1 (55-110)||(18736157-18736213)
chr1 (13-107)||(21449218-21449314)
chr1 (55-110)||(21987899-21987955)
chr1 (55-110)||(22623029-22623084)
chr1 (55-110)||(29242645-29242700)
chr1 (39-82)||(155183-155226)
chr1 (16-115)||(17121367-17121465)
chr1 (176-227)||(21449111-21449162)
chr1 (56-227)||(44795391-44795561)
chr1 (150-231)||(16916933-16917015)
chr1 (185-227)||(24306340-24306382)
chr1 (22-110)||(15543839-15543928)
chr1 (150-227)||(16069551-16069628)
chr1 (150-231)||(16787726-16787807)
chr1 (55-107)||(18529097-18529149)
chr1 (154-227)||(22622912-22622985)
chr1 (168-229)||(24053999-24054059)
chr1 (16-69)||(25961032-25961085)
chr1 (151-231)||(24267783-24267863)
chr1 (66-110)||(34481108-34481152)
[»] scaffold0622 (1 HSPs)
scaffold0622 (16-227)||(750-960)
[»] scaffold0024 (1 HSPs)
scaffold0024 (23-227)||(39606-39810)
[»] chr5 (30 HSPs)
chr5 (55-227)||(34487660-34487830)
chr5 (72-231)||(17171476-17171634)
chr5 (56-231)||(18937766-18937940)
chr5 (23-223)||(19283730-19283928)
chr5 (75-227)||(22755543-22755696)
chr5 (55-226)||(18208156-18208324)
chr5 (150-224)||(24245544-24245618)
chr5 (55-227)||(25402242-25402414)
chr5 (79-227)||(24266883-24267031)
chr5 (79-227)||(24343514-24343662)
chr5 (150-227)||(25550504-25550581)
chr5 (55-135)||(36175247-36175326)
chr5 (23-181)||(24662051-24662207)
chr5 (56-110)||(24260655-24260708)
chr5 (17-121)||(24265342-24265446)
chr5 (17-121)||(24341973-24342077)
chr5 (24-107)||(17314987-17315070)
chr5 (55-110)||(20563997-20564053)
chr5 (24-110)||(16523677-16523764)
chr5 (16-223)||(15690803-15691008)
chr5 (55-113)||(26121229-26121287)
chr5 (150-227)||(20315430-20315507)
chr5 (150-227)||(24140464-24140541)
chr5 (151-232)||(24852173-24852254)
chr5 (24-108)||(28664902-28664986)
chr5 (132-215)||(15375861-15375947)
chr5 (55-113)||(15375800-15375859)
chr5 (13-110)||(20744532-20744630)
chr5 (150-227)||(19004226-19004303)
chr5 (174-227)||(23388862-23388915)
[»] scaffold0155 (1 HSPs)
scaffold0155 (13-226)||(35857-36071)
[»] scaffold0351 (2 HSPs)
scaffold0351 (27-143)||(151-267)
scaffold0351 (27-115)||(5641-5729)
[»] scaffold0002 (1 HSPs)
scaffold0002 (27-139)||(114598-114710)
[»] scaffold0427 (1 HSPs)
scaffold0427 (16-213)||(2684-2881)
[»] scaffold0102 (1 HSPs)
scaffold0102 (56-231)||(35555-35730)
[»] scaffold0263 (1 HSPs)
scaffold0263 (55-110)||(15785-15840)
[»] scaffold0043 (1 HSPs)
scaffold0043 (16-227)||(89720-89930)
[»] scaffold0638 (2 HSPs)
scaffold0638 (55-113)||(727-786)
scaffold0638 (150-227)||(823-900)
[»] scaffold0838 (1 HSPs)
scaffold0838 (20-223)||(2396-2596)
[»] scaffold0832 (1 HSPs)
scaffold0832 (20-223)||(2427-2627)
[»] scaffold0056 (2 HSPs)
scaffold0056 (174-226)||(21299-21351)
scaffold0056 (55-110)||(25113-25168)
[»] scaffold0671 (1 HSPs)
scaffold0671 (24-110)||(569-655)
[»] scaffold0957 (1 HSPs)
scaffold0957 (16-110)||(3283-3377)
[»] scaffold0054 (1 HSPs)
scaffold0054 (55-110)||(72148-72204)
[»] scaffold0035 (2 HSPs)
scaffold0035 (55-110)||(70050-70106)
scaffold0035 (150-227)||(69935-70012)
[»] scaffold1869 (1 HSPs)
scaffold1869 (63-110)||(302-349)
[»] scaffold0019 (1 HSPs)
scaffold0019 (56-110)||(181612-181666)
[»] scaffold0016 (1 HSPs)
scaffold0016 (174-227)||(3553-3606)
[»] scaffold0386 (1 HSPs)
scaffold0386 (55-110)||(6010-6066)


Alignment Details
Target: scaffold0062 (Bit Score: 232; Significance: 1e-128; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 344
Target Start/End: Original strand, 43090 - 43421
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatc 112  Q
    |||||||| |||||||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43090 aatataaacagggggattcaaagagtcttaaccgctattttgttttctgtaaccaaaaacaggtaacttgctctgttgcaaacagataaaaattgcaatc 43189  T
Q  113 tctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactta 212  Q
    ||| ||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| | |||  ||||||    
T  43190 tctaacccttatctcttttattttatatcgtcaatttaaaataagtaacacgagctgtttagacgaaacgacaatccttgtggatacgttactttactta 43289  T
Q  213 tcacttcattacttgataattcgaccatcaatagacacctcgcattattatgtatgcagtagttgaactttaaaccttggatttctacttattcatctta 312  Q
    |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||    
T  43290 tcactttattacttgatatttcgaccatcaatagacacctcacattattatgtatgcagtggttgagctttaaaccttggatttctacttattcatttta 43389  T
Q  313 agggtgaatttatagtcattagaccatttgat 344  Q
    ||| ||||||||||||||||||| ||||||||    
T  43390 aggatgaatttatagtcattagatcatttgat 43421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 411 - 475
Target Start/End: Original strand, 43488 - 43552
Alignment:
Q  411 tcaggtgacatacagtactttaagcaaacaattggttggccctcatcagttattagaggattcag 475  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  43488 tcaggtgacatacagtactttaagcttacaattggttggccctcatcagttattggaggattcag 43552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 7318507 - 7318295
Alignment:
Q  16 ataaatagggggattcaaa-gagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc 114  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  7318507 ataaatagggggattcaaaagagtcctaatcgttgtttccttttctgcaaccaaaaagaagtaacttgctctgttgcaaacagataaaaattgcaatctc 7318408  T
Q  115 tgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatc 214  Q
    | ||||| || |||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||| |||||||||    
T  7318407 taacccttatctcttttattttatatcgtcaacttaaaataagtaatgcgagctgtttagacgaaacgacaatccatgtggatacgatactctacttatc 7318308  T
Q  215 acttcattacttg 227  Q
    |||| ||||||||    
T  7318307 actttattacttg 7318295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 17153027 - 17153231
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||||||||||||| ||| ||||| ||  |||||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||| |||||     
T  17153027 gggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaaacaggtaacttgctttgttgcaaacagataaaaataacaatctctaaccctt 17153126  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    || |||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||  |||||||| ||||| |||||||||||||  ||    
T  17153127 atctcttttattttatgtcgtcaacttaaaataagtaacgcgagctgtttagacgaaacgacaatctatgtggatacgatactctacttatcactttctt 17153226  T
Q  223 acttg 227  Q
    |||||    
T  17153227 acttg 17153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 10586890 - 10587101
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||| |||||||||||||||||||| | ||| ||  |||| |||||||| ||||| ||| |||||||||||||||| |||||||||||||||||| |    
T  10586890 ataaataaggggattcaaagagtcttaaccactgcttacttttttgcaaccagaaacatgtatcttgctctgttgcaaacagataaaaattgcaatcttt 10586989  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
     ||||| || ||||||||||||||  || || ||||||||||||||  ||| |||||||||||||||| ||||||||| |||| ||||| ||||||||||    
T  10586990 aacccttatttcttttattttatattgtaaacttaaaataagtaacatgagttgtttagacgaaacgacaatccctgtagatacgatactctacttatca 10587089  T
Q  216 cttcattacttg 227  Q
    ||| ||||||||    
T  10587090 ctttattacttg 10587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 8313259 - 8313472
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||||||| ||||||| |||  | || ||  ||||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||    
T  8313259 ataaatagggggattccaagagtcctaaatgttgcttacttttctgcaaccaaaat-aggtaacttgctctgttgaaaacagataaaaattgcaatctct 8313357  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacgc---gagctgtttagacgaaacgaaaatccctgtggatatgatacactactta 212  Q
     ||||| |  |||||||||||||||| |||| |||||||||||||| |    || |||||||||||||||| |||||||||||||| ||||  |||||||    
T  8313358 aacccttaactcttttattttataccttcaacttaaaataagtaacacaattagttgtttagacgaaacgacaatccctgtggatacgataatctactta 8313457  T
Q  213 tcacttcattacttg 227  Q
    |||||| ||||||||    
T  8313458 tcactttattacttg 8313472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 4786077 - 4785858
Alignment:
Q  13 aatataaatagg-gggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaa----ttg 107  Q
    |||||||||||| ||||||| |||| || ||| ||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||||    |      
T  4786077 aatataaataggagggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctattgcaaatagataaaaaaaattaa 4785978  T
Q  108 caatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacact 207  Q
     ||||||| ||||| |  |||||||||||||| |||||| | ||||||||||||| ||  || || |||||||||| ||||||||||||| |||||| ||    
T  4785977 aaatctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactct 4785878  T
Q  208 acttatcacttcattacttg 227  Q
    ||||||||||| ||||||||    
T  4785877 acttatcactttattacttg 4785858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 3734829 - 3734618
Alignment:
Q  16 ataaatagggg-gattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc 114  Q
    ||||||||||| ||||||||||||| ||| |  || ||  |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||     
T  3734829 ataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaaa-caggtaacttgctctgttgcaaacagataaaatttgcaatctt 3734731  T
Q  115 tgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatc 214  Q
    | ||||| |  |||||||||||||| |||||| ||||||||||||||| ||  ||||| ||| |||| | ||| | |||||||| ||||| |||||||||    
T  3734730 taacccttaactcttttattttatatcgtcaacttaaaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctacttatc 3734631  T
Q  215 acttcattacttg 227  Q
    |||| ||||||||    
T  3734630 actttattacttg 3734618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 15869820 - 15869617
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||||||||||||| ||| || |||||  |||| ||||||||||||||||||||||  ||| ||||||| |||||||| ||||||||||  |||||     
T  15869820 gggggattcaaagagtcctaaccgttgtttacttttatgcaaccaaaaacaggtaactttttctattgcaaacagataaaa-ttgcaatctcaaaccctt 15869722  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    || | |||||||||||| |||||| ||||||||||||||||   || ||||||| |||| ||||||| || ||||| ||||| ||||||||||||| |||    
T  15869721 atctattttattttatatcgtcaacttaaaataagtaacgcagactatttagacaaaacaaaaatccttgcggatacgatactctacttatcactttatt 15869622  T
Q  223 acttg 227  Q
    |||||    
T  15869621 acttg 15869617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 9574639 - 9574429
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||||||||||||||||| || |||  |||||||  |||||| ||| ||||  ||||| ||||||||| ||||||| ||||||||||| |||| |||    
T  9574639 ataaatagggggattcaaagaatcctaactgctgtttacttttcttcaaacaaac-caggttacttgctctattgcaaacagataaaaattacaatttct 9574541  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
     ||||| |  |||||||||||||| |||||| ||||||||| |||||||||  ||||||||||||| | |||| |||| |||| ||||| ||||||||||    
T  9574540 aacccttaactcttttattttatatcgtcaacttaaaataaataacgcgagtcgtttagacgaaacaacaatctctgtagatacgatactctacttatca 9574441  T
Q  216 cttcattacttg 227  Q
    ||| ||| ||||    
T  9574440 ctttattccttg 9574429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 4819033 - 4818858
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaa----ttgcaatctctgaccctgatatcttttattttataccgtcaattta 150  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||    |   ||||||| ||||| |  |||||||||||||| |||||| | |    
T  4819033 ttttctgcaaccaaaaataggtaacttgctctattgcaa-tagataaaaaaaattaaaaatctctaacccttaactcttttattttatatcgtcaactaa 4818935  T
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||| ||  || || |||||||||| ||||||||||||| |||||| ||||||||||||| ||||||||    
T  4818934 aaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttg 4818858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 81 - 227
Target Start/End: Complemental strand, 4986723 - 4986577
Alignment:
Q  81 tgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaa 180  Q
    ||||||| | |||| |||||||||||||||||||| ||||| |   |||||||||| || |||||| ||||||||||||||||||||| |||||||||||    
T  4986723 tgctctgcttcaaacagataaaaattgcaatctctaacccttaacacttttattttttatcgtcaacttaaaataagtaacgcgagctatttagacgaaa 4986624  T
Q  181 cgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||| ||||| ||||| ||  |||| ||||| | ||||| ||||||||    
T  4986623 cgacaatccatgtgggtactatactctactcagcactttattacttg 4986577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 81 - 227
Target Start/End: Complemental strand, 4990821 - 4990675
Alignment:
Q  81 tgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaa 180  Q
    ||||||| | |||| |||||||||||||||||||| ||||| |   |||||||||| || |||||| ||||||||||||||||||||| |||||||||||    
T  4990821 tgctctgcttcaaacagataaaaattgcaatctctaacccttaacacttttattttttatcgtcaacttaaaataagtaacgcgagctatttagacgaaa 4990722  T
Q  181 cgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||| ||||| ||||| ||  |||| ||||| | ||||| ||||||||    
T  4990721 cgacaatccatgtgggtactatactctactcagcactttattacttg 4990675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 55 - 231
Target Start/End: Original strand, 7492168 - 7492344
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctctgaccctgatatcttttattttataccgtc-aatttaaa 152  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||| |  |||||||  ||||| | || || | |||    
T  7492168 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaacagttaaaaattgcaaatctctaacccttaactctttta--ttatatcatcaaaataaaa 7492265  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||| || |  |||||  ||||||| | ||||| |||||||| ||||| |||||||||| || |||||| |||||    
T  7492266 ataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctacttatcattttattactggataa 7492344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 218
Target Start/End: Complemental strand, 18662667 - 18662472
Alignment:
Q  21 tagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccc 120  Q
    ||||||||||| ||||||| ||| ||||| ||   ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| ||| || |    
T  18662667 tagggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaa-caggtaacttgctctgttgcaaacaaataaaaattgcaatatctaactc 18662569  T
Q  121 tgatatcttttattt-tataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    | | ||||||||||| |||   ||  |    |||||||||||| ||  ||||| |||||||||| ||||| |||||||| ||||| |||||||||||||    
T  18662568 tcaaatcttttatttatattttgttca--ccaaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactt 18662472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 16365942 - 16365727
Alignment:
Q  13 aatataaatagggg-gattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattg-caa 110  Q
    |||||||||||||| ||||| |||| || ||| ||||| ||  |||| |||||||||||||| ||||||||||| | ||||||||||| |||||||  ||    
T  16365942 aatataaataggggagattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacatgtaacttgctcagatgcaaatagatcaaaattgaaaa 16365843  T
Q  111 tctctgaccctgatatcttttattttataccgtcaa-tttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactac 209  Q
    ||||| | ||| |  |||||||  ||||| |||||| || ||||||||||||||||  |||||  || |||||| ||||| |||||||| ||||| ||||    
T  16365842 tctctaaaccttaactctttta--ttatatcgtcaacttaaaaataagtaacgcgaattgtttgcacaaaacgacaatccatgtggatacgatactctac 16365745  T
Q  210 ttatcacttcattacttg 227  Q
    || | |||| ||||||||    
T  16365744 tttttactttattacttg 16365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 227
Target Start/End: Complemental strand, 1584731 - 1584566
Alignment:
Q  60 tgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa-tctctga-ccctgatatcttttattttataccgtcaatttaaaataag 157  Q
    ||||||||||||| |||||||| |||||||||| | | ||||| |||  || ||||| | |||| || | |||||||||||  |||||| ||||||||||    
T  1584731 tgcaaccaaaaactggtaacttactctgttgcagacatataaatattttaaatctcttaacccttatct-ttttattttat--cgtcaacttaaaataag 1584635  T
Q  158 taacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||  |||||||||||||| | |||||||||||||| ||||| | ||||||||||| ||||||||    
T  1584634 taacgcgatttgtttagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttg 1584566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 55 - 218
Target Start/End: Original strand, 9731532 - 9731695
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctctgaccctgatatcttttattttataccgtc-aatttaaa 152  Q
    |||| ||||||||||||||||||||||||| |||| || ||||||||||||||| ||||||| |  |  |  |||||||||||||  | || || | |||    
T  9731532 ttttatgcaaccaaaaacaggtaacttgctatgttacacatagataaaaattgcaaatctctaattcgtaactcttttattttat--catcaaactaaaa 9731629  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    |||||||||||||  ||||| |||||||||| ||||| ||||| || ||||| |||||||||||||    
T  9731630 ataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcactt 9731695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 6013825 - 6013611
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaa-ttgcaatctc 114  Q
    |||||||| ||||||||||||||| ||| || || |   |||||||||||||||  || |||| ||||| ||||||||| | ||||||| |||||||| |    
T  6013825 ataaatagagggattcaaagagtcataaccgttgctcacttttctgcaaccaaa--catgtaaattgctttgttgcaaacaaataaaaaattgcaatcgc 6013728  T
Q  115 tgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatc 214  Q
    | |||||    |||||||||||||| | ||||  |||||||||||| || |  ||||| ||  ||| || ||||| |||||||| ||||| |||||||||    
T  6013727 taaccctttactcttttattttatatcatcaaactaaaataagtaaagccaattgtttggataaaatgagaatccttgtggatacgatactctacttatc 6013628  T
Q  215 acttcattacttgataa 231  Q
    |||| | ||||||||||    
T  6013627 acttaagtacttgataa 6013611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 13759860 - 13759933
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    |||||||||||||||| |||||| |||||||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  13759860 aaaataagtaacgcgaactgtttggacgaaacgacaatccttgtggatatgatactctacttatcactttatta 13759933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 9864327 - 9864403
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| |  |||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||    
T  9864327 aaataagtaacgcaaattgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattacttg 9864403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 1587904 - 1587712
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctg--accct 121  Q
    ||||||||||||| || ||  ||||| ||  |||||||||||||| |   ||||||||||||||||||||| | ||||||||||||||||||   |||||    
T  1587904 ggggattcaaagattcatatccgctgcttacttttctgcaaccaaga---ggtaacttgctctgttgcaaacaaataaaaattgcaatctctctaaccct 1587808  T
Q  122 gatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
     | ||||||||||||||| ||||||   |||||| |||||||||  ||||| || ||||| |  |||  ||| |||||||||| ||| |||||||||    
T  1587807 aa-atcttttattttatatcgtcaaaacaaaataggtaacgcgaattgtttggatgaaacaactatctatgtagatatgatactctaattatcactt 1587712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 5108801 - 5108706
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattg 107  Q
    |||||||||||||||||||||||| || ||| ||||| ||  |||||||||||||||| || || |||||||||| ||||||| ||||||||||||    
T  5108801 aatataaatagggggattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagataaaaattg 5108706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 3329562 - 3329735
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaattt--- 149  Q
    ||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||| ||||| |||||  ||||||| |  ||||||  | || ||       
T  3329562 ttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaactctctaaccct--tatctttca--ttatacgttaaacttaca 3329657  T
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||    ||||| || ||||||| ||||| |||||||| ||||| ||||||||||||| ||||||||    
T  3329658 aaaataagtaacgcagattgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttg 3329735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 7397335 - 7397275
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||||    
T  7397335 ttttctgcaaccaaaaacagataacttgttttgttgcaaacagataaaaattgcaatctct 7397275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 8978911 - 8979083
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaattt---- 149  Q
    |||||||||||||||||||||||| |||| ||| ||||||| |||| ||||||||||   || |||||  |||||||||| ||     |||||  |        
T  8978911 ttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaaatcctaacccttttatcttttatatt-----gtcaaacttacc 8979005  T
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||| ||||  ||||| |||||||| | ||||| |||||||||||||| ||||||||||||| ||||||||    
T  8979006 aaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttg 8979083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 11803179 - 11803103
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    ||||||||||||||||  ||||| ||||||| || |||||||||||||| ||||| ||||||||||||| |||||||    
T  11803179 aaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttatcactttattactt 11803103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 14195842 - 14195937
Alignment:
Q  19 aatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||||||||| |||| ||||||| | || ||   ||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  14195842 aatagggggattcgaagaatcttaattgttgcttacatttctgcaatcaaaa-cagataacttgctctgttgcaaacagataaaaattgcaatctct 14195937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 2564054 - 2563840
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa- 110  Q
    |||||||| |||||||||| |||  || ||| ||||  ||  |||||||||| | ||| ||||||| |||||||||||||||| ||||||||||| |||     
T  2564054 aatataaacagggggattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatttcaac 2563955  T
Q  111 tctctgaccctgatatcttttattttataccgtcaattta---aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacact 207  Q
    ||||| |||||  |||||||||  ||||| ||| || |||   ||||||||||| | |  ||||| |||||||||| ||||| |||||||| ||||| ||    
T  2563954 tctctaaccct--tatctttta--ttatatcgtgaacttacagaaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactct 2563859  T
Q  208 acttatcacttcattacttg 227  Q
    ||||| ||||| ||||||||    
T  2563858 actta-cactttattacttg 2563840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 225
Target Start/End: Original strand, 3190935 - 3191134
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    |||||||||||| |||| || |||||  ||  ||||||||||||||| | |  ||||||| ||||||||||| | ||||||||| |||||||| ||||      
T  3190935 gggggattcaaatagtcctactcgctacttacttttctgcaaccaaataga--taacttg-tctgttgcaaacatataaaaattacaatctctaacccaa 3191031  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    |   ||||| ||||||| | |||| ||||||||| |||| |||  ||||| |||||||||| ||||||| | ||||| ||||  ||||| |||||| |||    
T  3191032 aacccttttgttttatatcctcaacttaaaataaataacacgaattgtttggacgaaacgacaatccctatagatataatactttacttttcactttatt 3191131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 19153489 - 19153434
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  19153489 ttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgcaa 19153434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 20752888 - 20752833
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  20752888 ttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgcaa 20752833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 16297739 - 16297805
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccct 121  Q
    ||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||| ||| |||||    
T  16297739 ttttctgcaaccaaaaataggtaacttactctgttgcaaacatataaaaattgcaatttctaaccct 16297805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 6042685 - 6042589
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||| ||||||||| || ||| ||||| ||  ||||||||||||||||| ||||||  | |||||||||||| | |||||||||||||    
T  6042685 aatataaatagggg-attcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaacttctctgttgcaaacatataaaaattgcaa 6042589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 17829801 - 17829697
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||||||| |||| |||||| | ||| ||  |||||| ||||||||| ||| ||||||| ||||||||||| ||||||||||| ||||| ||    
T  17829801 ataaatagggggattcgaagaatcttaaccactgcttaattttctccaaccaaaa-cagttaacttgttctgttgcaaacagataaaaattacaatcgct 17829703  T
Q  116 gaccct 121  Q
     |||||    
T  17829702 aaccct 17829697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 10648770 - 10648600
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc-tgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    ||||||||||||||| || |||||||||| ||||||||| ||||||||||||||||||| | ||||| |  || |||||| |||    |   | ||||||    
T  10648770 tttctgcaaccaaaa-catgtaacttgctttgttgcaaacagataaaaattgcaatctcttaaccctcaactc-tttattgtattattttgttctaaaat 10648673  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||| |||  |||||||| ||||||| ||||| || | ||||||||| ||| ||||||||| ||||||||    
T  10648672 aagtaacacgaattgtttagatgaaacgacaatccgtgcgcatatgatactctatttatcactttattacttg 10648600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 20582449 - 20582394
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  20582449 ttttctgcaaccaaaa-caggtaaacttgctctgttgcaaatagataaaaattgcaa 20582394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 1848091 - 1848193
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaat 111  Q
    |||||| |||||| ||||| |||| || ||| ||||| ||  |||||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||     
T  1848091 aatatatatagggagattcgaagaatcataaccgctgcttacttttctgcaaccaaaa-caggtaaacttgctctgtttcaaacagataaaaattgcaag 1848189  T
Q  112 ctct 115  Q
    ||||    
T  1848190 ctct 1848193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 140297 - 140251
Alignment:
Q  68 aaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc 114  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  140297 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 140251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 1584407 - 1584318
Alignment:
Q  73 aggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgc 163  Q
    |||||||||||| | ||||||| |||||||||||||||||||| ||| | |  |||||||||||||| ||||||   ||||||||||||||    
T  1584407 aggtaacttgcttt-ttgcaaaaagataaaaattgcaatctctaacctttaactcttttattttatatcgtcaaaacaaaataagtaacgc 1584318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 8293948 - 8293997
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaatt 106  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  8293948 tttctgcaaccaaaa-caggtaacttgctctgttgcaaacagataaaaatt 8293997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 18368884 - 18368938
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgca 109  Q
    |||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  18368884 ttttctacaaccaaaagcaggtaacttgctttgttgcaaacagataaaaattgca 18368938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 11221164 - 11221240
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    |||||||||||||| |  |||||| ||||||||| ||||||||||||||  |||| |||||||||| || |||||||    
T  11221164 aaaataagtaacgcaaattgtttacacgaaacgacaatccctgtggatacaatactctacttatcaatttattactt 11221240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 39273081 - 39273137
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||| ||||||    
T  39273081 ttttctgcaaccaaaaataggtaaacttgctctgttgcaaatagattaaatttgcaa 39273137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 9131104 - 9131049
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||| ||||||||||||||| ||||||||||| ||||||| | |||||||||||||    
T  9131104 ttttttgcaaccaaaaacagttaacttgctctattgcaaacaaataaaaattgcaa 9131049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 1848227 - 1848304
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||| |  ||||| ||||||| || |||||| ||||||| |||||  |||||||||||| ||||||||    
T  1848227 aaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtacttatcactttattacttg 1848304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 13418744 - 13418660
Alignment:
Q  26 ggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||| || ||| ||||| ||  ||| |||||| ||||| ||||||| |||||||||||||||| |||||||||||||||    
T  13418744 ggattcaaagaatcctaaccgctgcttactttgctgcaatcaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 13418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 18368980 - 18369057
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||  ||  ||||| |||||||||| ||||||| ||||||  |||| ||||||||||||| ||||||||    
T  18368980 aaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttg 18369057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 6006131 - 6006073
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||| ||||||| |||||||||| |||||||||||| |||| |||||||||||||||    
T  6006131 ttttctgccaccaaaa-caggtaacttactctgttgcaaacagat-aaaattgcaatctct 6006073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 14755135 - 14755211
Alignment:
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    ||||||| || | |||||||||||||| | ||| | |||||||||||||| |||||| |||||| | ||||||||||    
T  14755135 aagtaacacgggttgtttagacgaaacaacaatacttgtggatatgatactctacttctcactttactacttgataa 14755211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 17191119 - 17191175
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||||||||| || | ||||||||| ||| |||||||||||||||    
T  17191119 ttttctgcaaccaaaaacaggtaaaatcgctctgttggaaacagataaaaattgcaa 17191175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 13418653 - 13418565
Alignment:
Q  133 ttttataccgtcaatttaaaa---taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    |||||||||||||| ||||||   |||||||||  |  ||||| ||||||| || ||||||| |||||| ||||| |||||||||||||    
T  13418653 ttttataccgtcaacttaaaaaaataagtaacgacaaatgtttggacgaaaggacaatccctatggatacgatactctacttatcactt 13418565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 18467532 - 18467474
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    |||||||||||||||| ||||| ||||||||  ||||  |||||||||||| |||||||    
T  18467532 tgtttagacgaaacgacaatccatgtggatacaatactttacttatcactttattactt 18467474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 8054489 - 8054562
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    ||||||||||||  ||  ||||| |||||||||| ||| |||||| ||| ||||| ||||||||||||| ||||    
T  8054489 aaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcactttatta 8054562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 110
Target Start/End: Complemental strand, 8877592 - 8877559
Alignment:
Q  77 aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||||| |||||||||||||||    
T  8877592 aacttgctctgttgcaaacagataaaaattgcaa 8877559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 16058942 - 16058991
Alignment:
Q  59 ctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattg 107  Q
    ||||||||||||||| |||| || ||||||||||||| ||||||||||||    
T  16058942 ctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattg 16058991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 17203122 - 17203042
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||||||||||   ||||| |||||||||| |||||| ||| ||| ||||| |||||||| |||| ||||||| ||||    
T  17203122 aaaataagtaacgcggattgtttggacgaaacgacaatccccgtgaatacgatactctacttat-actttattacttcataa 17203042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 5530119 - 5530043
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||| | |  ||||| ||||||||||||||| ||||||||| ||| |  ||||||||| || ||||||||    
T  5530119 aaataagtaacacaaattgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttg 5530043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 8053937 - 8054016
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaa 103  Q
    ||||||||||||| || |||  |||| ||  |||||||||||| ||||||||| |||||||| | ||||||||||||||||    
T  8053937 ggggattcaaagaatcctaactgctgcttacttttctgcaacc-aaaacaggtaaacttgctatattgcaaatagataaaa 8054016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 9500542 - 9500466
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||| ||||  |||||||||||||| | ||||| |||||||| ||||| ||| | ||||| | ||||||||    
T  9500542 aaataagtaatgcgaattgtttagacgaaacaacaatccttgtggatacgatactctaatgatcacattattacttg 9500466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 10584487 - 10584567
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    ||||||||||| |||  |||||  | ||||||| ||||| |||||||| |||||  | |||||||||| ||||||||||||    
T  10584487 aaataagtaacacgaattgtttctatgaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataa 10584567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 13289324 - 13289380
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||||||||||| || || || ||||||| ||| |||||||||||    
T  13289324 ttttctgcaaccaaaaacaggtaaattcgcactattgcaaacagaaaaaaattgcaa 13289380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 16306792 - 16306716
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||| || |  |||||||| |||| || ||||| ||| |||| ||||| ||||||||||||| ||||||||    
T  16306792 aaataagtaatgcaaattgtttagatgaaatgataatccttgtagatacgatactctacttatcactttattacttg 16306716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 31493011 - 31492955
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattac 224  Q
    ||||| ||| |||||| ||||| |||||||| ||||| ||||||||||||| |||||    
T  31493011 tgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattac 31492955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 23 - 223
Target Start/End: Original strand, 25182301 - 25182501
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  25182301 gggggattcaaagagtcctaaccactgtttccttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctaaccctt 25182400  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    || |||||||||||||| |||||| |||||||||||||||| ||| |||||||||||| || ||||| |||| ||| ||||| |||||| |||||| |||    
T  25182401 atctcttttattttatatcgtcaacttaaaataagtaacgcaagcagtttagacgaaatgacaatccatgtgaatacgatactctacttgtcactttatt 25182500  T
Q  223 a 223  Q
    |    
T  25182501 a 25182501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 13698086 - 13697893
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||||||||||||||| ||||| ||| ||  |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  13698086 ataaatagggggattcaaagagtcataatcactgcttacttttctgcaaccaaa--caggtaacttgctctgttgcaaagagataaaaattgcaatctct 13697989  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactt 211  Q
     ||||| || |||| ||||||||| |||||| ||||||||||||||||  | ||||| |||||||||||||||| |||||||| ||||| ||||||    
T  13697988 aacccttatctcttgtattttatatcgtcaacttaaaataagtaacgcaggttgtttggacgaaacgaaaatccttgtggatacgatactctactt 13697893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 19786958 - 19786753
Alignment:
Q  22 agggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccct 121  Q
    ||||| |||||||||||| ||| |  |||||| |||||| ||| |||||||| |||||||||||||||||||| ||||||||||| |||||||| ||  |    
T  19786958 aggggaattcaaagagtcctaaccattgtttccttttctacaatcaaaaacatgtaacttgctctgttgcaaacagataaaaattacaatctctaacttt 19786859  T
Q  122 gatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcat 221  Q
     || |||||||||||||| | |||| |||||| ||||||| |||| ||||| |||||||||| | ||||| ||||||||||||  ||||| |||||| ||    
T  19786858 tatctcttttattttatatcatcaacttaaaacaagtaacacgagttgtttggacgaaacgacagtccctatggatatgatactttacttgtcactttat 19786759  T
Q  222 tacttg 227  Q
    ||||||    
T  19786758 tacttg 19786753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 14528342 - 14528171
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||  ||||||||||||| ||||||||| || ||||||||||||||||| ||||| |  | |||||||||||| ||||| ||||||||    
T  14528342 ttttctgcaaccaaac-caggtaacttgctttgttgcaaacagctaaaaattgcaatctctaacccttaactattttattttatatcgtcagtttaaaat 14528244  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||| ||| ||||| |||||||||| ||||  |||||||| ||||| |||| |||||||| ||||||||    
T  14528243 aagtaacgtgagttgtttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattacttg 14528171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 34497345 - 34497137
Alignment:
Q  19 aatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgac 118  Q
    ||||||||||||||| || || ||| ||||| ||  |||||||||| ||||  |||||||| |||| ||||||||| |||||||||||||||||||| ||    
T  34497345 aatagggggattcaaggaatcctaaccgctgcttacttttctgcaagcaaac-caggtaacatgctatgttgcaaaaagataaaaattgcaatctctaac 34497247  T
Q  119 cctgata-tcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcact 217  Q
    |||   | |||||||||||||| |||||||||||||||||||||| |   ||||| |||||||||| | || || |||||| ||||| ||||| ||||||    
T  34497246 cctttaactcttttattttatatcgtcaatttaaaataagtaacgtggattgtttggacgaaacgacagtctctatggatacgatactctactaatcact 34497147  T
Q  218 tcattacttg 227  Q
    | ||||||||    
T  34497146 ttattacttg 34497137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 13314856 - 13315069
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa- 110  Q
    |||||||||||||| |||| |||| |||||| || || ||  |||||||||||||||||||||||| || | || |||||||| | |||||||||||||     
T  13314856 aatataaatagggg-attcgaagaatcttaaccgttgcttacttttctgcaaccaaaaacaggtaaatttgttcagttgcaaacatataaaaattgcaac 13314954  T
Q  111 tctctgaccctgatatcttttattttataccgtcaattta--aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacacta 208  Q
    ||||| ||  |  ||||||||||| |||  |||||| |||  |||||||||||||||  ||||| |||||||| ||||||| |||||||| |||||  ||    
T  13314955 tctctaacgtt--tatcttttattatat--cgtcaacttataaaataagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactata 13315050  T
Q  209 cttatcacttcattacttg 227  Q
    |||||||||| ||||||||    
T  13315051 cttatcactttattacttg 13315069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 2637699 - 2637616
Alignment:
Q  148 ttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| |||||||| ||||| ||||||||||||| ||||||||||||    
T  2637699 ttaaaataagtaacgggagttgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataa 2637616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 6885150 - 6884982
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctct-gaccctgatatcttttattttataccgtc-aatttaaa 152  Q
    |||||||||||||||||||||||||| |||| || |||| ||||||||||||| |||||||  ||||| || || ||||||||||  |||| || |||||    
T  6885150 tttctgcaaccaaaaacaggtaacttactctattacaaacagataaaaattgcaaatctctaaacccttatctc-tttattttat--cgtcaaacttaaa 6885054  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattact 225  Q
    ||||||| ||| || ||||| |||||||||| ||||| ||| |||| ||||| | ||||||||||| ||||||    
T  6885053 ataagtagcgcaagttgtttggacgaaacgacaatccatgtagatacgatactc-acttatcactttattact 6884982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 30806438 - 30806578
Alignment:
Q  96 agataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctg--- 192  Q
    |||||||||||||||||||| ||||| |  |||||||||||||| ||||||  ||||||||||||||| |  ||||| || ||||||| ||||| ||       
T  30806438 agataaaaattgcaatctctaacccttaactcttttattttatatcgtcaaactaaaataagtaacgcaaattgtttggatgaaacgacaatccttgtgg 30806537  T
Q  193 --tggatatgatacactacttatcacttcattacttgataa 231  Q
      |||||| ||||| ||||||||||||| ||||||| ||||    
T  30806538 actggatacgatactctacttatcactttattacttaataa 30806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 17976717 - 17976637
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||||| ||||  ||| |||||||||||||||||  |||||||| ||||| ||||||||||||| ||||||||||||    
T  17976717 aaataagtaatgcgaaatgtgtagacgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataa 17976637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 18448447 - 18448502
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  18448447 ttttatgcaaccaaaaacaggtaacttgctctgttgcaaacagataaaaactgcaa 18448502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 21314722 - 21314640
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataat 232  Q
    ||||||||||||| |   |||||  ||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||||    
T  21314722 aaaataagtaacgagtattgtttgcacgaaacgaaaatccctgtagatacgatacactacttatcactttattacttggtaat 21314640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 44010931 - 44010989
Alignment:
Q  57 ttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||||||||||||| |||||||| ||||||||||| | ||||||||||||||||||    
T  44010931 ttctgcaaccaaaaacatgtaacttgttctgttgcaaacatataaaaattgcaatctct 44010989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 24114282 - 24114359
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||| || ||||| |||||||||| |||||||| ||||| ||||| |||||||||| || ||||||||    
T  24114282 aaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacgatactctacttatcattttattacttg 24114359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 29382361 - 29382438
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||| |  ||||| || ||||||| |||||||||||||| ||||| ||||||||||||| ||||||||    
T  29382361 aaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttg 29382438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 24904731 - 24904659
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    |||||||||| | ||  |||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||||    
T  24904731 aaataagtaatgtgaattgtttagacgaaacgacaatcactgtggatatgatactctacttatcactttatta 24904659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 24269822 - 24269735
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||| |||| || ||| ||||| ||  ||||||||||||||||||||||||  | |||||||||||| ||||||| |||||||    
T  24269822 gggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactactctgttgcaaacagataaagattgcaa 24269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 7983813 - 7983716
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc 114  Q
    ||||||||||||||||||||| || ||  || || ||  |||||||||||||||  |||| |||||||| ||| ||||| |||||||||||||||||||    
T  7983813 ataaatagggggattcaaagaatcctacccgttgcttacttttctgcaaccaaac-caggcaacttgctatgtcgcaaacagataaaaattgcaatctc 7983716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 24645034 - 24644971
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaac-ttgctctgttgcaaatagat--aaaaattgcaatctct 115  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||  ||||||||||||||||    
T  24645034 ttttctgcaaccaaaaacaggtaactttgttatgttgcaaatagataaaaaaattgcaatctct 24644971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 27659629 - 27659573
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||| ||||||||||    
T  27659629 ttttctgcaacaaaaaacaggtaaacttgctcttttgcaaatagattaaaattgcaa 27659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 29382266 - 29382322
Alignment:
Q  55 ttttctgcaaccaaaaacaggta-acttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||    
T  29382266 ttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaa 29382322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 30122020 - 30122115
Alignment:
Q  16 ataaataggggga-ttcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaat 111  Q
    ||||||||||||| ||||||||||  ||| | ||| ||  ||||||||||||||||  ||||||||| ||||||| |||| ||||||||||||||||    
T  30122020 ataaatagggggaattcaaagagttataaccactgcttacttttctgcaaccaaaat-aggtaacttactctgttacaaacagataaaaattgcaat 30122115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 17509365 - 17509268
Alignment:
Q  133 ttttataccgtcaattta---aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||| |||   |||||||||| | ||  ||||| |||||||  | ||||| |||||||||||||| ||||||||||||| ||||||||    
T  17509365 ttttataccgtcaacttataaaaataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattacttg 17509268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 17101810 - 17101863
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattg 107  Q
    |||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  17101810 ttttttgcaatcaaaaacaggtaaacttgctctgttgcaaacagataaaaattg 17101863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 27659544 - 27659468
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    |||||||||||| ||   ||||| |||||||||| ||||| ||| |||| ||||| ||||||||||||| |||||||    
T  27659544 aaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttattactt 27659468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 15238896 - 15238833
Alignment:
Q  152 aataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
    ||||||||||||||  |||||||||||||||| ||| | |||||||| ||||  ||||||||||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatca 15238833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 17101911 - 17101970
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||| || ||||||| ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  17101911 tgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttg 17101970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 24269678 - 24269620
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||| |||||||||| |||||||||||||| ||||| ||||||| ||||| ||||||||    
T  24269678 tgtttggacgaaacgacaatccctgtggatacgatactctactta-cactttattacttg 24269620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 9642107 - 9642018
Alignment:
Q  19 aatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgca 109  Q
    |||||||||||||||||| | |||| ||||| |    |||||||||| |||| || |||| ||||||||||||||  ||||||||||||||    
T  9642107 aatagggggattcaaagaattttaaccgctgctaacatttctgcaactaaaa-caagtaatttgctctgttgcaagcagataaaaattgca 9642018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 229
Target Start/End: Original strand, 23893246 - 23893280
Alignment:
Q  195 gatatgatacactacttatcacttcattacttgat 229  Q
    |||||||||| ||||||||||||||||||||||||    
T  23893246 gatatgatactctacttatcacttcattacttgat 23893280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 26394562 - 26394643
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaa 94  Q
    ||||||||||||||||||| |||| || ||| || || ||  |||||||||||| ||||||||| |||||||| |||||||||    
T  26394562 aatataaatagggggattcgaagaatcctaaccgttgcttacttttctgcaacc-aaaacaggtaaacttgctttgttgcaaa 26394643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 28276677 - 28276719
Alignment:
Q  68 aaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||| |||||||||||||||  |||||||||||||||||||    
T  28276677 aaaacaagtaacttgctctgttttaaatagataaaaattgcaa 28276719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 23893119 - 23893174
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||| ||||||| || ||| ||||||||| |||||||||||||||    
T  23893119 ttttctgcaaccaaaa-caggtaaatttgctttgttgcaaacagataaaaattgcaa 23893174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 30122156 - 30122231
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||| ||||  ||||| ||| ||| || ||||| |||||||||||||| ||||||| ||||| ||||||||    
T  30122156 aaataagtaatgcgaattgtttggacaaaatgacaatccatgtggatatgatactctactta-cactttattacttg 30122231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 32085695 - 32085485
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||||||||||| |||||||| ||| ||||| ||  |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  32085695 ataaatagggggatttaaagagtcctaaccgctgcttacttttctgcaaccaaac-caggtaacttgctctgttgcaaacagataaaaattgcaatctct 32085597  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
     || || |  |||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  32085596 aactcttaactcttttattttatatcgtcaacttaaaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctacttatca 32085497  T
Q  216 cttcattacttg 227  Q
    ||| ||||||||    
T  32085496 ctttattacttg 32085485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 28606041 - 28606239
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatc 112  Q
    ||||||||| |||||||| ||||| || |||  | |||||| |||| |||||| |||||||||||||||| | ||| | ||| | |||||||||||||||    
T  28606041 aatataaatggggggatttaaagattcctaacagttgtttccttttatgcaacaaaaaacaggtaacttgttatgtcgtaaacaaataaaaattgcaatc 28606140  T
Q  113 tctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactt 211  Q
    ||| |||||  | ||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||| |||||  ||||||| ||||| ||||||    
T  28606141 tctaacccttgtctcttttattatatatcgtcaacttaaaataagtaacgccagctgtttagacgaaacgacaatcctagtggatacgatactctactt 28606239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 20174554 - 20174712
Alignment:
Q  69 aaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagct 168  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||| ||||| |  | |||||||||||| | |||| ||||||||||||||  ||  |    
T  20174554 aaacaggtaatttgctctgttgcaaacagataaaaattccaatctctaacccttaactattttattttatatcatcaacttaaaataagtaacatgaatt 20174653  T
Q  169 gtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||| |||||||||| ||||| |||||| ||||||| ||||||||||||| ||||||||    
T  20174654 gtttggacgaaacgacaatccatgtggaaatgatactctacttatcactttattacttg 20174712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 25618791 - 25618578
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa- 110  Q
    ||||||||| ||||||||| |||| |   || ||||| ||  |||||||||||||||| ||||||| ||| |||||||||||| |||||||||||||||     
T  25618791 aatataaatggggggattcgaagaattcgaaccgctgcttacttttctgcaaccaaaa-caggtaaactttctctgttgcaaacagataaaaattgcaaa 25618693  T
Q  111 tctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactact 210  Q
    ||||| ||  |    ||||||||| |||  |||||| | ||||||||| ||||||  |||||||||||||||| ||||| |||||||||||||| |||||    
T  25618692 tctctaacttttcactcttttattatat--cgtcaactaaaaataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctact 25618595  T
Q  211 tatcacttcattacttg 227  Q
    |||||||| ||||||||    
T  25618594 tatcactttattacttg 25618578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 29719137 - 29719308
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaatttaaa 152  Q
    ||||||||||||||| |||||||| |||||||||||||| | | ||||||||||||| ||||| ||||| ||||  ||||||  ||||||||||  ||||    
T  29719137 ttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaactctctaacccttatat--tttatt--ataccgtcaaactaaa 29719232  T
Q  153 a-taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    | ||||||||||||  |||||  ||||||||| ||||| |||||||| ||||  ||||||||||||| ||||||||    
T  29719233 aataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcactttattacttg 29719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 29027689 - 29027582
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||  ||||| ||||||||| ||||||| |||||||||||||||||||| ||||| || |||||||||| ||| || ||| |||||||    
T  29027689 ttttctgcaaccaaat-caggtcacttgctctcttgcaaacagataaaaattgcaatctctaacccttatctcttttatttaatatcggcaacttaaaat 29027591  T
Q  155 aagtaacgc 163  Q
    |||||||||    
T  29027590 aagtaacgc 29027582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 25887766 - 25887864
Alignment:
Q  13 aatataaataggggg-attcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||| |||  |||| || ||||||||| ||  ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  25887766 aatataaataggggggatttgaagaatcataatcgctggttacttttctgcaaccaaaaataggtaacttgctctgttgcaaacagataaaaattgcaa 25887864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 26603223 - 26603320
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||||| |||| || ||| ||||| ||  |||||| |||||||||||||||||  |||||||||||||| |||||||||||||||    
T  26603223 aatataaatagggggattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaactgctctgttgcaaacagataaaaattgcaa 26603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 15339432 - 15339260
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaatttaaa 152  Q
    ||||||||||| |||||||| ||| |||||||||||||||| | ||||||||||||| ||||| |||||  ||||||||||| ||| || | | ||  ||    
T  15339432 ttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaactctctaaccct--tatcttttattatat-ccttaacttacaa 15339336  T
Q  153 a-taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    | |||||||||| |  ||||| |||||||||| ||||| |||||||||||||| |||||| |||||| ||||||||    
T  15339335 agtaagtaacgctaattgtttggacgaaacgacaatccatgtggatatgatactctacttttcactttattacttg 15339260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 13776532 - 13776365
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa-tctctga-ccctgatatcttttattttataccgtcaatttaa 151  Q
    ||||||| ||| |||||||||||| ||| |||||||||||| ||||||||||||||| ||||| | |||| || ||||| |||||||  |||||| ||||    
T  13776532 ttttctggaacaaaaaacaggtaatcttactctgttgcaaacagataaaaattgcaaatctcttaacccttatctcttt-attttat--cgtcaacttaa 13776436  T
Q  152 aataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    ||||||||||| | | ||||| ||||||| || ||||  |||||||| ||||| | ||||||||||| ||||    
T  13776435 aataagtaacgtgggttgtttggacgaaatgacaatctatgtggatacgatactc-acttatcactttatta 13776365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 17349542 - 17349379
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaattt--aa 151  Q
    |||| |||||||||||||| |||| |||||||||||||||| ||||||||||||||       |||||  |||||||||  ||||| |||||| ||  ||    
T  17349542 ttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacagataaaaattgca-------accct--tatctttta--ttatatcgtcaacttacaa 17349454  T
Q  152 aataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||  ||||| |||||||||| ||||  |||||||| ||||| ||||||| ||||| ||||||||    
T  17349453 aataagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgatactctactta-cactttattacttg 17349379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 17890162 - 17890076
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||| ||||| ||||||||| || ||   ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  17890162 gggggattgaaagaatcttaatcgttgcttacatttctgcaaccaaaa-caggtaacttgctctgttgcaaacatataaaaattgcaa 17890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 27908981 - 27909079
Alignment:
Q  13 aatataaataggggg-attcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||| |||| |||| || ||| ||||| ||  |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  27908981 aatataaataggggggattcgaagaatcctaaccgctgcttaattttctgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 27909079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 30411903 - 30411805
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||| || |||||||||| || | || ||| ||||| ||  ||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  30411903 aatatgaacagggggattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa 30411805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 227
Target Start/End: Original strand, 45621809 - 45621958
Alignment:
Q  77 aacttgctctgttgcaaatagataaaaattgcaatctctgaccctgat-atcttttattttataccgt-caatttaaaataagtaacgcgagctgtttag 174  Q
    |||||||| ||||||||| ||||||||||| ||| |||| ||||| || ||||||||||||||   || |||   |||||||||||| |||  ||||| |    
T  45621809 aacttgctatgttgcaaacagataaaaattacaaactctaacccttatcatcttttattttattttgttcaa---aaaataagtaacacgaattgtttgg 45621905  T
Q  175 acgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||| ||||| ||| |||| ||||| |||||| |||||| ||||||||    
T  45621906 acgaaacgacaatccttgtagatacgatactctacttctcactttattacttg 45621958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 17743476 - 17743553
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||| |||  ||||| |||||||||| ||||| |||||||| ||||| ||||||||||||| ||||||||    
T  17743476 aaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctacttatcactttattacttg 17743553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 25196109 - 25196032
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| ||  ||||| ||||||| || || ||||||||||||||||| ||||||||||||| ||||||||    
T  25196109 aaaataagtaacgtgaattgtttggacgaaaggacaacccctgtggatatgatactctacttatcactttattacttg 25196032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 23933415 - 23933506
Alignment:
Q  19 aatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaat 111  Q
    |||||||||||||||||| || ||| ||||| ||  |||| || |||||||  || |||||||||||||||||||| ||||||||||||||||    
T  23933415 aatagggggattcaaagaatcctaaccgctgcttacttttgtgaaaccaaac-caagtaacttgctctgttgcaaacagataaaaattgcaat 23933506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 11382658 - 11382826
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctctgaccctgatatcttttattttataccgtc-aatttaaa 152  Q
    |||||| |||| ||||||| |||||||||||||||||||| |||||||| |||| ||||||| ||  | |  |||||||| ||||  |||| || | |||    
T  11382658 ttttctacaacaaaaaacaagtaacttgctctgttgcaaacagataaaatttgcaaatctctaacttttaactcttttatcttat--cgtcaaactaaaa 11382755  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    |||||||||||||  | ||| || ||||  | ||| | |||||||||||||| ||||||||||||| ||||    
T  11382756 ataagtaacgcgaattatttggatgaaaatacaattcatgtggatatgatactctacttatcactttatta 11382826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 25920478 - 25920391
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||| || ||||| ||| |   |||||||||||||||||||||| || | ||||||||||||| |||||||||||||||    
T  25920478 ggggattcaaagaatcataatcactgctcacttttctgcaaccaaaaacaggtaaaatcgctctgttgcaaacagataaaaattgcaa 25920391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 29143174 - 29143088
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||| |||| |||||| ||||||||  |||||| |||||||||  |||||| |||||||||||||||| |||||||||||||||    
T  29143174 ggggattcgaagaatcttaaccgctgtttacttttctacaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaa 29143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 17635683 - 17635852
Alignment:
Q  58 tctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa--tctctgaccctgatatcttttattttataccgtcaattt---aa 151  Q
    ||||||||||||| ||||||| |||||||||||||||| |||||||||||||||  | ||| |||||  ||||     ||||| | |||||| ||   ||    
T  17635683 tctgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaacccttttatc-----ttttacatcgtcaacttacaaa 17635776  T
Q  152 aataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||| ||| | ||| |||||||||| |||| ||||||||||||| | |||||| || ||| ||||||||    
T  17635777 aataagtaacgtgagtttttttgacgaaacgacaatctctgtggatatgattctctacttttctctttattacttg 17635852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 17675524 - 17675589
Alignment:
Q  45 cgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||  |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  17675524 cgctgtttatttttctgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 17675589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 23011637 - 23011839
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||||  ||||||||||| ||||| ||  |||||| |||||||| |  ||||||||| | ||||| ||||||||||||||| |||| ||| |||||     
T  23011637 gggggatttgaagagtcttaaccgctggttacttttctacaaccaaata--ggtaacttgatatgttggaaatagataaaaatttcaatatctaaccctt 23011734  T
Q  123 atatcttttatt-ttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcat 221  Q
    |  ||||||||| ||||| |||| |    |||||| |||||| |  ||||||||| |||||| ||||| ||||||||  |||  ||||||| ||||| ||    
T  23011735 aactcttttattattatatcgtctagactaaataaataacgcaaattgtttagacaaaacgacaatccttgtggatacaataatctactta-cactttat 23011833  T
Q  222 tacttg 227  Q
    ||||||    
T  23011834 tacttg 23011839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 12953294 - 12953375
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    ||||||||||||||||  ||||| |||||||||| ||||| |||||| |  |||| |||||||| |||| ||||||||||||    
T  12953294 aaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataa 12953375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 45553320 - 45553268
Alignment:
Q  57 ttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  45553320 ttctgcaaccaaaa-caggtaacttgctatgttgcaaacagataaaaattgcaa 45553268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 25530522 - 25530467
Alignment:
Q  174 gacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgat 229  Q
    ||||||| || |||||||||||||| ||||| ||||||||||||| ||||||||||    
T  25530522 gacgaaaggacaatccctgtggatacgatactctacttatcactttattacttgat 25530467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 25535349 - 25535294
Alignment:
Q  174 gacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgat 229  Q
    ||||||| || |||||||||||||| ||||| ||||||||||||| ||||||||||    
T  25535349 gacgaaaggacaatccctgtggatacgatactctacttatcactttattacttgat 25535294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 31804804 - 31804973
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaattt--- 149  Q
    |||||||||||||||||||||| || ||||| | ||||||| | ||||||||||||| ||||| |||||  |||||||||  ||||| |||||| ||       
T  31804804 ttttctgcaaccaaaaacaggtaaatttgctttattgcaaacaaataaaaattgcaactctctaaccct--tatctttta--ttatatcgtcaacttaca 31804899  T
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    |||||||||||| |    || || |||||||||  |||| |||||||||  |||| ||||||||||||| ||||    
T  31804900 aaaataagtaacacagattggttggacgaaacggcaatctctgtggatacaatactctacttatcactttatta 31804973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 17743382 - 17743438
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||| ||||||||||||||||| ||||||  |||||||| |||||||||||||||    
T  17743382 ttttctacaaccaaaaacaggtaaacttgcttagttgcaaaaagataaaaattgcaa 17743438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 25885335 - 25885528
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    |||| |||||||||||| ||| | ||| ||  |||||| |||||||   |||||||| | |||| || | || |||||||||||| ||| ||| |||||     
T  25885335 ggggaattcaaagagtcctaaccactgcttacttttctacaaccaac--caggtaaccttctctattccgaacagataaaaattgaaatatctaaccctt 25885432  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    |  |||||||||||||| ||||    ||||||||||||| | |  ||||| |||||||||| ||| | |||||||| |||||  | ||||||||||    
T  25885433 aactcttttattttatatcgtcggaataaaataagtaacacaaattgtttggacgaaacgacaattcttgtggatacgatactattcttatcactt 25885528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 25888216 - 25888297
Alignment:
Q  142 gtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||| ||||||||||||||||||  |||||    ||||||| ||||| |||||||| |||||  |||||||||||| ||||||||    
T  25888216 gtcaacttaaaataagtaacgcgaattgttt----gaaacgacaatccatgtggatacgatactgtacttatcactttattacttg 25888297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 27418465 - 27418389
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    |||||||||||| |||  ||||| |  |||| || ||||| |||||||||||||| ||||||||||||| |||||||    
T  27418465 aaaataagtaacacgaattgtttggttgaaatgataatccatgtggatatgatactctacttatcactttattactt 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 21078543 - 21078585
Alignment:
Q  68 aaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  21078543 aaaataggtaactttctctattgcaaatagataaaaattgcaa 21078585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 25530671 - 25530574
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    |||||| | |||||||||| |||| || ||| ||||| ||  | || ||||||||||| ||||||| || ||||||||||||| |||||||||||||||    
T  25530671 aatatacagagggggattcgaagaatcctaaccgctgcttactattttgcaaccaaaa-caggtaaattcgctctgttgcaaacagataaaaattgcaa 25530574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 30411777 - 30411703
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattac 224  Q
    |||||||||||||| |  ||||  ||||||| || ||||||||| |||| ||||| ||||||||||||| |||||    
T  30411777 aaaataagtaacgcaaattgttgggacgaaatgacaatccctgttgatacgatactctacttatcactttattac 30411703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 27909119 - 27909196
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| ||  ||||| || ||||| | || || |||||||| ||||| ||||||||||||| ||||||||    
T  27909119 aaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacgatactctacttatcactttattacttg 27909196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 26667417 - 26667337
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactta-tcacttcattacttgat 229  Q
    ||||||||||||| ||  ||||   |||||| ||||||||||||||||| ||||| ||||||| | |||| ||||||||||    
T  26667417 aaaataagtaacgagaattgttcgtacgaaaggaaaatccctgtggatacgatactctacttactaactttattacttgat 26667337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 28925715 - 28925660
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||| ||||||| |||||| ||||||||| | |||||||||||||    
T  28925715 ttttctgcaaccaaaa-caggtaaacttgctatgttgcaaacaaataaaaattgcaa 28925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 168162 - 168375
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatc 112  Q
    |||||||| |||||||||||||||||| ||| || |||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  168162 aatataaacagggggattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaacttgctctgttgcaaacagataaaaattgaaatc 168261  T
Q  113 tctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactta 212  Q
    ||| ||||| || |||||||||||||| |||||| |||||||||||||| |||||| |||||| ||||||| ||| |||||||||| ||||| |||||||    
T  168262 tctaacccttatgtcttttattttatatcgtcaacttaaaataagtaacacgagctatttagaagaaacgacaat-cctgtggatacgatactctactta 168360  T
Q  213 tcacttcattacttg 227  Q
    |||||| ||||||||    
T  168361 tcactttattacttg 168375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 5e-63; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 14649130 - 14648917
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatc 112  Q
    |||||||| |||||||||||||||||| ||| || |||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  14649130 aatataaacagggggattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaacttgctctgttgcaaacagataaaaattgaaatc 14649031  T
Q  113 tctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactta 212  Q
    ||| ||||| || |||||||||||||| |||||| |||||||||||||| |||||| |||||| ||||||| ||| |||||||||| ||||| |||||||    
T  14649030 tctaacccttatgtcttttattttatatcgtcaacttaaaataagtaacacgagctatttagaagaaacgacaat-cctgtggatacgatactctactta 14648932  T
Q  213 tcacttcattacttg 227  Q
    |||||| ||||||||    
T  14648931 tcactttattacttg 14648917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 17672195 - 17672024
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||| | |  |||||||||||||| ||| || |||||||    
T  17672195 ttttctgcaaccaaac-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaacctttaactcttttattttatatcgttaacttaaaat 17672097  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||| |||||||||||||| | ||||| ||||||||  |||| ||||||||||||| ||||||||    
T  17672096 aagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattacttg 17672024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 19929548 - 19929752
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    |||| ||| |||||||| |||  | |||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||||||| ||||| | |||||     
T  19929548 ggggaatttaaagagtcctaactgttgtttccttttctgcaaccaaaaacatgtaatttgctctgttgcaaacagataaaaattgaaatctttaaccctt 19929647  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    || ||||||||||||||  ||||| |||||||||||||| || ||| |||||||||||||| ||||| |||||||| ||||| ||| |||||||||  ||    
T  19929648 atctcttttattttatattgtcaacttaaaataagtaacacgggctatttagacgaaacgacaatccatgtggatacgatactctatttatcactttgtt 19929747  T
Q  223 acttg 227  Q
    |||||    
T  19929748 acttg 19929752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 23 - 231
Target Start/End: Complemental strand, 19092520 - 19092313
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||| ||||||||| ||| |||| |||  ||||||| |||||||| ||||||| || |||||||| ||| |||||||||||||||||||| || ||     
T  19092520 gggggatgcaaagagtcctaaccgctatttacttttctgtaaccaaaa-caggtaatttactctgttgtaaacagataaaaattgcaatctctaactctt 19092422  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    || |||||||||| ||| |||||| |||||||||| |||| ||| ||||| |||||||||| ||||| |||| ||  ||||| || |||||||||| |||    
T  19092421 atctcttttatttaatatcgtcaacttaaaataagcaacgtgagttgtttggacgaaacgacaatccatgtgaatgcgatactcttcttatcactttatt 19092322  T
Q  223 acttgataa 231  Q
    |||||||||    
T  19092321 acttgataa 19092313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 17955041 - 17955225
Alignment:
Q  42 aatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttatacc 141  Q
    |||||||| ||  |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||     |||||||||||||| |    
T  17955041 aatcgctgcttgcttttctgcaaccaaat-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaacccatcactcttttattttatatc 17955139  T
Q  142 gtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||| |||||||||||||||||||||  ||||||||||||| ||  ||  |||||| |||||  |||||||||||| | ||||||    
T  17955140 gtcaacttaaaataagtaacgcgagctagttagacgaaacgacaaatccaatggatacgatactttacttatcactttagtacttg 17955225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 17951202 - 17951373
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||     |||||||||||||| |||||| |||||||    
T  17951202 ttttctgcaaccaaat-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaacccgtcactcttttattttatatcgtcaacttaaaat 17951300  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||  ||||||||||||| ||  ||  |||||| |||||  |||||||||||| | ||||||    
T  17951301 aagtaacgcgagctagttagacgaaacgacaaatccaatggatacgatactttacttatcactttagtacttg 17951373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 5679438 - 5679227
Alignment:
Q  16 ataaataggg-ggattcaaagagtcttaatcgctgttt-cgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatct 113  Q
    |||||||||| |||||||||||||| |||| |||| || | |||| |||||||||| |  |||||||||||||||| |||| |||||||||||||||| |    
T  5679438 ataaatagggaggattcaaagagtcctaatggctgcttactttttttgcaaccaaata--ggtaacttgctctgttacaaacagataaaaattgcaatgt 5679341  T
Q  114 ctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttat 213  Q
    || ||||| |  |||||||||||||| ||| || ||||||||||||||||||  ||||| |||||||| ||| | | ||| |||| ||||| ||||| ||    
T  5679340 ctaacccttaactcttttattttatatcgttaacttaaaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctactaat 5679241  T
Q  214 cacttcattacttg 227  Q
    ||||| ||||||||    
T  5679240 cactttattacttg 5679227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 12578176 - 12578339
Alignment:
Q  59 ctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagt 158  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||    |||||||||||||| |||||| ||||||||||     
T  12578176 ctgcaaccaaaa-caggtaacttgctctgttgcaaacagataaaaattgtaatctctaaccctttactcttttattttatatcgtcaacttaaaataaga 12578274  T
Q  159 aacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    ||||| |  ||||| ||| |||||| ||||| |||||||| ||||| ||| ||||||||| ||||    
T  12578275 aacgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttatta 12578339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 227
Target Start/End: Original strand, 22357405 - 22357612
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    |||||||||||| |||| ||| || || ||| |||||||||| |||||||| |||||||||| | ||||||| | |||||||||||||||||| || ||     
T  22357405 gggggattcaaaaagtcctaaacgatgcttccttttctgcaatcaaaaacaagtaacttgctatattgcaaacaaataaaaattgcaatctctaactctt 22357504  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgata---cactacttatcacttc 219  Q
    || |||| | ||||||| |||||| || ||||||||||| ||| ||||||| | ||||||| ||||| |||||||| ||||   |  ||||||||||||     
T  22357505 atctcttattttttatatcgtcaactttaaataagtaacacgaactgtttaaatgaaacgacaatccatgtggatacgatagtactttacttatcacttt 22357604  T
Q  220 attacttg 227  Q
    ||||||||    
T  22357605 attacttg 22357612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 86 - 231
Target Start/End: Complemental strand, 11490694 - 11490550
Alignment:
Q  86 tgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaa 185  Q
    ||||| ||| |||||||||||||||||||| || || |  |||||||||||||| ||||||  |||||||||||||||||  ||||| || ||||| | |    
T  11490694 tgttgaaaacagataaaaattgcaatctctaacactaac-tcttttattttatatcgtcaaactaaaataagtaacgcgaattgtttggaagaaactaca 11490596  T
Q  186 atccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  11490595 atccctgtggatacgatactctacttatcactttattacttgataa 11490550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 17336997 - 17337210
Alignment:
Q  13 aatataaata-gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgc-a 109  Q
    |||||||||| ||||||||| |||| || ||||| ||| ||  |||| ||||||||||||||||||| |||||||||||| ||| ||||||||||||| |    
T  17336997 aatataaataagggggattcgaagaatcataatctctgcttacttttatgcaaccaaaaacaggtaaacttgctctgttgtaaacagataaaaattgcaa 17337096  T
Q  110 atctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactac 209  Q
    |||||  |||||    |||||||  ||||| |||||| | |||||||||||||| |  ||||| ||||||| || |||| || |||||| ||||| ||||    
T  17337097 atctcaaaccctttactctttta--ttatatcgtcaactaaaaataagtaacgcaaattgtttggacgaaatgacaatctctttggatacgatactctac 17337194  T
Q  210 ttatcacttcattact 225  Q
    ||||||| | ||||||    
T  17337195 ttatcacgttattact 17337210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 22 - 227
Target Start/End: Complemental strand, 13909081 - 13908876
Alignment:
Q  22 agggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaatctctgaccc 120  Q
    ||||||||||||||| || ||| ||||| ||  |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||     |||      
T  13909081 agggggattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa-----gactt 13908987  T
Q  121 tgatatcttttattttataccgtcaattt----aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcac 216  Q
    |   | ||||  ||||||| ||||||  |    |||||||||||| |||  ||||| |||||||||| ||||| |||||||| ||||| |||||||||||    
T  13908986 tctaacctttacttttatatcgtcaaaattacaaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcac 13908887  T
Q  217 ttcattacttg 227  Q
    || ||||||||    
T  13908886 tttattacttg 13908876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 21323784 - 21323941
Alignment:
Q  57 ttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctga-ccctgatatcttttatt-ttataccgtcaatttaaaat 154  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | |||| |  ||||||||| || ||  ||   |  |||||    
T  21323784 ttctgcaaccaaaa-caggtaacttgctctgttgcaaatagataaaaattgtaatctcttatccctcaactcttttattattttattgt---tcaaaaat 21323879  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcac 216  Q
    |||||||||||  ||||| |||||||||| ||||  |||||||| ||||| ||||| |||||    
T  21323880 aagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcac 21323941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 77 - 227
Target Start/End: Complemental strand, 17216991 - 17216839
Alignment:
Q  77 aacttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaatttaaaa---taagtaacgcgagctgttt 172  Q
    |||||||||||||||||| ||||||||||||||| | ||| |||||  |||||| |||| |||  | |||| ||| ||   ||||||||| ||  |||||    
T  17216991 aacttgctctgttgcaaacagataaaaattgcaactttctaacccttttatcttgtattatat--catcaacttacaaatataagtaacgagaattgttt 17216894  T
Q  173 agacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
     |||||||||| ||||| |||||||||||||| ||||||||||||| ||| ||||    
T  17216893 ggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttg 17216839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 19562080 - 19562137
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaat 111  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  19562080 ttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaat 19562137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 13128778 - 13128951
Alignment:
Q  55 ttttctgcaacc-aaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaatttaa 151  Q
    |||||||||||| ||||||||| || ||| ||||||| |||| | ||||||||||||| ||||| |||||  ||||||||||| |||   ||||| | ||    
T  13128778 ttttctgcaaccgaaaaacaggcaaacttactctgttccaaacaaataaaaattgcaactctctaaccct--tatcttttattatatg--gtcaactaaa 13128873  T
Q  152 aa--taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||  ||||||||||||| ||||| |||||||||| ||||||| ||||||  |||| |||||||||| || ||||||||    
T  13128874 aaaataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttg 13128951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 16730399 - 16730467
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    ||||||||||||||||| ||||| |||||||||||||||| | |||||| ||||| |||||||||||||    
T  16730399 aaaataagtaacgcgagttgtttggacgaaacgaaaatccttttggatacgatactctacttatcactt 16730467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 25121096 - 25121189
Alignment:
Q  19 aatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatct 113  Q
    ||||||||||||| |||| || ||| ||||| ||  |||||||||| ||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  25121096 aatagggggattcgaagaatcctaaccgctgcttacttttctgcaatcaaaa-cgggtaacttgctctgttgcaaacagatagaaattgcaatct 25121189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 13692669 - 13692746
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||| |||  ||||| | |||||||| ||||| |||||||||||||| ||||||||||||| ||||||||    
T  13692669 aaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttg 13692746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 11933524 - 11933441
Alignment:
Q  143 tcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||| ||||||||||||||||||| ||||| |||||||||| ||||| |||||  | ||||| | ||||||||||||||||||||    
T  11933524 tcaaattaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggtcacgatactc-acttatcacttcattacttg 11933441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 19882738 - 19882658
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||||||||||  ||||| |||||||||| ||||| ||| |||| ||||| ||||| ||||||| ||||||||||||    
T  19882738 aaataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataa 19882658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 3775021 - 3774975
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaa 103  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  3775021 tttctgcaaccaaaaa-aggtaacttgctctgttgcaaatagataaaa 3774975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 24639324 - 24639415
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaa 103  Q
    ||||||||||| |||||||||||| || ||| | ||| ||  |||||||||||| ||||||||| |||||||||||||||||| | ||||||    
T  24639324 aatataaatagagggattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaacaaataaaa 24639415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 231
Target Start/End: Original strand, 22175911 - 22176043
Alignment:
Q  98 ataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggat 197  Q
    |||||||||||||||||| ||||| |  |||||||||||||| | |||| | ||||||| | ||||||  ||||| ||  ||| || |||| || |||||    
T  22175911 ataaaaattgcaatctctaacccttaactcttttattttatatcatcaactcaaaataa-ttacgcgaattgtttggagaaaatgacaatctctatggat 22176009  T
Q  198 atgatacactacttatcacttcattacttgataa 231  Q
    |  |||| ||||||||||||| ||||||||||||    
T  22176010 acaatactctacttatcactttattacttgataa 22176043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 20315098 - 20315022
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| |  ||||| |||||||||| ||||| |||||||||||||  |||||||||| || ||||||||    
T  20315098 aaataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttg 20315022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 24639472 - 24639536
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataat 232  Q
    ||||| ||| |||||||||||| |||||||| ||||| ||||||||||||| |||||||| ||||    
T  24639472 tgtttggacaaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaat 24639536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 7582378 - 7582319
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||| |||||||| | ||||| |||||||||||||| ||||||||||||| ||||||||    
T  7582378 tgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttg 7582319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 7582522 - 7582435
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||| || ||| | ||| ||  |||||||||||||||||||||| |||||| ||| ||||||| |||| ||||||||||    
T  7582522 ggggattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaa 7582435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 15047209 - 15047150
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||||||||||| ||| |||| ||| | ||||||||||||| ||||||||    
T  15047209 tgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttg 15047150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 15107215 - 15107274
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||||||||||| ||| |||| ||| | ||||||||||||| ||||||||    
T  15107215 tgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttg 15107274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 20829645 - 20829696
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattg 107  Q
    |||||||||||||||||| |||||||||| ||| ||||| ||||||||||||    
T  20829645 tttctgcaaccaaaaacaagtaacttgctatgtcgcaaacagataaaaattg 20829696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 8969653 - 8969699
Alignment:
Q  75 gtaacttgctctgttgcaaatagataaaaattgcaatctctgaccct 121  Q
    |||||||||||||||||| ||||||| |||||||||||||| |||||    
T  8969653 gtaacttgctctgttgcatatagatataaattgcaatctctaaccct 8969699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 13992879 - 13992953
Alignment:
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||| |||  ||||| ||| |||||||||||| |||||||| ||||| ||||||| ||||| ||||||||    
T  13992879 ataagtaacacgaattgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttg 13992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 26115823 - 26115865
Alignment:
Q  68 aaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  26115823 aaaacaggtaacttactctgttgcaaacagataaaaattgcaa 26115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 16730316 - 16730361
Alignment:
Q  66 caaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||    
T  16730316 caaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 16730361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 19492700 - 19492777
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||||  ||||| || ||||||| ||| | |||||||| ||||| ||||||||| ||| ||||||||    
T  19492700 aaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttattacttg 19492777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 15164959 - 15164904
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||| ||||||| |||||||||||||||| | |||||||||||||    
T  15164959 ttttctgcaaccaaaa-caggtaaacttgctctgttgcaaacaaataaaaattgcaa 15164904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 17026218 - 17026305
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||| |||| || ||| ||||| ||  || ||||||||||||||||||| || || |||||||||||| ||||||||| |||||    
T  17026218 ggggattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaaaactgcaa 17026305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 19374719 - 19374777
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||||||||||| ||||||||||||| || |||||| | |||||| |||||||||||    
T  19374719 tttctgcaaccaaaa-caggtaacttgctttgctgcaaacatataaaatttgcaatctct 19374777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 40228011 - 40227917
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattg 107  Q
    ||||||||||||||||||| |||| || ||| ||||| ||  ||||| ||||| ||||| |||| ||||| ||| |||||||| ||||||||||||    
T  40228011 aatataaatagggggattc-aagaatcctaaccgctgcttatttttcggcaacaaaaaataggtaaacttactccgttgcaaacagataaaaattg 40227917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 11521210 - 11521272
Alignment:
Q  169 gtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    ||||||| ||||||| ||||| |||| ||| ||||| ||||||||||||| |||| |||||||    
T  11521210 gtttagaagaaacgacaatccatgtgtatacgatactctacttatcactttattatttgataa 11521272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 15164866 - 15164789
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||| |  ||||| ||||||| || |||||||||||||| ||||| || ||||| | || ||||||||    
T  15164866 aaaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatactctgcttattaattgattacttg 15164789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 13692586 - 13692642
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||||||||| |||||||||| || ||||   |||||||||||||    
T  13692586 ttttctgcaaccaaaaacaggtaaacttgctcttttacaaactaataaaaattgcaa 13692642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 19492617 - 19492673
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||||| || |||||||| ||||||||| | ||||| |||||||    
T  19492617 ttttctgcaaccaaaaacatgtaaacttgctgtgttgcaaacaaataaatattgcaa 19492673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 25121227 - 25121302
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||||  ||||| |||||||| | ||||| |||||||| |||||  |||||| ||||| ||||||||    
T  25121227 aaataagtaacgcgaattgtttggacgaaaccacaatccttgtggatacgatactatactta-cactttattacttg 25121302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 55097 - 54882
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatc 112  Q
    ||||||||||||||||||||||||||| ||| |  |||||  |||| ||||||||||||||||||||||||| ||| ||||| | |||||||||| ||||    
T  55097 aatataaatagggggattcaaagagtcctaaccagtgttttcttttgtgcaaccaaaaacaggtaacttgctatgtcgcaaacaaataaaaattggaatc 54998  T
Q  113 tctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacg-aaacgaaaatccctgtggatatgatacactactt 211  Q
    ||| ||||| || | |||||||||||| ||| || |||||||||||||||| |||| |||||||| |||||| ||||||||||||||  |||| ||||||    
T  54997 tctaacccttatcttttttattttatatcgttaacttaaaataagtaacgcaagctatttagacgaaaacgacaatccctgtggatacaatactctactt 54898  T
Q  212 atcacttcattacttg 227  Q
    ||||||| ||||||||    
T  54897 atcactttattacttg 54882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 6630554 - 6630755
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaataga-taaaaattgcaat 111  Q
    |||||||||||||| |||||||||||| ||| |||| ||||  ||| ||||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  6630554 aatataaataggggtattcaaagagtcctaaccgctatttccatttttgcaaccaaaaacaggtaacttgctctgttgcaaaaaaaataaaaattgcaat 6630653  T
Q  112 ctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactt 211  Q
    |||| ||| | |||||||||||||||||  ||||| |||||||||||||||| ||| ||||||||||||||| ||||  |||||||  ||||| ||||||    
T  6630654 ctctaacctttatatcttttattttatattgtcaacttaaaataagtaacgcaagcggtttagacgaaacgacaatctatgtggatccgatactctactt 6630753  T
Q  212 at 213  Q
    ||    
T  6630754 at 6630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 23 - 223
Target Start/End: Original strand, 28933534 - 28933733
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||||||||||||| ||| ||||||||| |||| ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| |||||     
T  28933534 gggggattcaaagagtcctaaccgctgtttcctttt-tgcaaccaagaacaagtaacttgctctgttgcaaacagataaaaattgcaatctctaaccctt 28933632  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    || |||||||||||||| | |||| |||||||||| ||| | |  ||||| |||||||||| ||||| |||||||| ||||| ||||||||||||| |||    
T  28933633 atctcttttattttatatcatcaacttaaaataagcaacacaaattgtttggacgaaacgataatccttgtggatacgatactctacttatcactttatt 28933732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 21907666 - 21907454
Alignment:
Q  17 taaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaat--tgcaatctc 114  Q
    |||||| |||||||||||||||| ||| ||||||||| |||| |||||||||||| || ||||||||||||||||||| ||||||||||  || ||| ||    
T  21907666 taaataaggggattcaaagagtcgtaaccgctgtttccttttttgcaaccaaaaatagctaacttgctctgttgcaaacagataaaaattatgtaatttc 21907567  T
Q  115 tgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatc 214  Q
    | ||||| || |||||||||||||| | |||| ||||| ||||||||||||  | ||| |||||||||| ||||| |||||||| |||||  ||||||||    
T  21907566 taacccttatctcttttattttatatcatcaacttaaattaagtaacgcgacttttttggacgaaacgacaatccttgtggatacgatactttacttatc 21907467  T
Q  215 acttcattacttg 227  Q
    |||| ||||||||    
T  21907466 actttattacttg 21907454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 11177175 - 11176981
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctga 123  Q
    ||||||| |||||||| ||| ||||||||| |||| || ||| |||||||||||||||||| |||||||||   |||||||||||||| ||| ||||| |    
T  11177175 ggggatttaaagagtcctaaccgctgtttccttttatgtaacaaaaaacaggtaacttgctatgttgcaaacttataaaaattgcaatttctaaccctta 11177076  T
Q  124 tatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    | |||||||||||||| ||||||||||||||||||||| |||  | ||| || ||||||| || || |||||||| ||||| |||||||||||||    
T  11177075 tctcttttattttatatcgtcaatttaaaataagtaacacgaattatttcgaagaaacgacaacccatgtggatacgatactctacttatcactt 11176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 227
Target Start/End: Original strand, 12183185 - 12183408
Alignment:
Q  4 atgtcgaagaatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaa 103  Q
    ||||| || ||||||||||||||||||| |||| || ||| || || ||  ||||||| |||||||| ||||||||||||| ||||||||| |||||||     
T  12183185 atgtccaacaatataaatagggggattcgaagaatcctaaccgttgcttacttttctgtaaccaaaa-caggtaacttgctatgttgcaaacagataaac 12183283  T
Q  104 attgcaatctctgaccctgata-tcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgat 202  Q
    |||||||||||| ||| | | | |||||||||||||| |||||  ||||||||||||||| ||  ||||  ||||||| || ||||| |||||||| |||    
T  12183284 attgcaatctctaacctttaaactcttttattttatatcgtcaccttaaaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgat 12183383  T
Q  203 acactacttatcacttcattacttg 227  Q
    ||  |||||||||||| ||||||||    
T  12183384 actgtacttatcactttattacttg 12183408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 225
Target Start/End: Complemental strand, 9838549 - 9838380
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||| | ||||||||||||| ||||||| ||||||||||| |||||||| || ||    |||||||||||||| ||||||  ||||||    
T  9838549 ttttctgcaaccaaaa-cgggtaacttgctcttttgcaaacagataaaaattacaatctctaacgcttcactcttttattttatatcgtcaaactaaaat 9838451  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattact 225  Q
    |||||||||||| |||||  || ||| || ||||| ||||||||  |||| ||||||||||||| ||||||    
T  9838450 aagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctacttatcactttattact 9838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 231
Target Start/End: Complemental strand, 4339928 - 4339753
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||| |||||||||||||  |||||||| | ||||| |||| ||||||| ||||| || |||||||||||||| ||||||  ||||||    
T  4339928 ttttctgcaaccaaaa-caggtaacttgcttagttgcaaacaaataaatattgtaatctctaacccttatctcttttattttatatcgtcaaactaaaat 4339830  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||| ||||  || || ||| |||||| ||||  ||||||||  |||| ||||||||||||| |||| |||||||    
T  4339829 aagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctacttatcactttattatttgataa 4339753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 27737552 - 27737766
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa- 110  Q
    ||||||||  || |||||| |||| || ||| ||||| ||  |||| |||||| |||||||||||| |||||||||||||||| |||||||||||||||     
T  27737552 aatataaaatggaggattcgaagaatcctaaccgctgcttacttttttgcaac-aaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac 27737650  T
Q  111 tctctgaccctgatatcttttattttataccgtcaattta---aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacact 207  Q
    ||||| |||||  ||||||| |||||||  |||||| |||   |||||||||||||||  ||||| |||||||| | ||||| ||||| |||||||| ||    
T  27737651 tctctaaccct--tatctttcattttat--cgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactct 27737746  T
Q  208 acttatcacttcattacttg 227  Q
    ||||||||||| ||||||||    
T  27737747 acttatcactttattacttg 27737766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 8241505 - 8241308
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||||||||||||||| ||||| | | |||| ||  |||||| ||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||    
T  8241505 ataaatagggggattcaaaaagtctaact-gctgcttacttttctacaaccaaa--caggtaacttgctatgttgcaaacagataaaaattgcaatctct 8241409  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
     || || |  |||||||||||||| ||| ||  |||||||||||| | ||  ||||| ||| ||||| ||  || |||||||| ||||| ||||||||||    
T  8241408 aactcttaactcttttattttatatcgtgaaactaaaataagtaatgtgaattgtttggacaaaacgcaa--ccttgtggatacgatactctacttatca 8241311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 15466597 - 15466392
Alignment:
Q  20 atagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgacc 119  Q
    |||| ||||||  ||||||  ||| ||||||||  ||||||||||||||| |  ||||||||||||||||||||| |||||||| ||||||||||| |||    
T  15466597 atagagggatttgaagagttctaaccgctgtttacttttctgcaaccaaata--ggtaacttgctctgttgcaaacagataaaatttgcaatctctaacc 15466500  T
Q  120 ctgatatcttttatt-ttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    || |  ||||||||| ||||| ||| ||   ||||||| ||||||||  ||||||||||||| || ||||||| | |||| ||||| |||| || |||||    
T  15466499 cttaactcttttattattatatcgttaaaacaaaataactaacgcgaattgtttagacgaaatgacaatccctattgatacgatactctacgta-cactt 15466401  T
Q  219 cattacttg 227  Q
     ||||||||    
T  15466400 tattacttg 15466392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 21672352 - 21672512
Alignment:
Q  68 aaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctctgaccctgatatcttttatt-ttataccgtcaatttaaaataagtaacgcga 165  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| | |||  || || ||||| || || |||||| | |||| ||||||| |||    
T  21672352 aaaacaggtaacttgctcagttgcaaatagataaaaattgcaaatctctaatcct-ttaactcttattattttatcgtcaactaaaaaaaagtaacacga 21672450  T
Q  166 gctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
      ||||| ||||||| || ||||| |||||||| ||||| ||||||||||||| ||||||||    
T  21672451 attgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttg 21672512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 22568069 - 22567862
Alignment:
Q  18 aaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctga 117  Q
    ||||||||| |||||||||||| | | || || ||  |||||||||||||||   ||||||||  |||||||||||| |||||||| || |||||||| |    
T  22568069 aaataggggtattcaaagagtcattaccgttgcttacttttctgcaaccaaact-aggtaactgactctgttgcaaacagataaaa-ttacaatctctaa 22567972  T
Q  118 ccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcact 217  Q
    |||| |   ||||||||||||| ||| || ||||||||||||||| ||| ||||| |||||||| | ||||| ||||||||  ||||  ||||| ||||     
T  22567971 cccttaacccttttattttatatcgttaacttaaaataagtaacgtgagttgtttggacgaaaccacaatccatgtggatacaatactatacttttcacg 22567872  T
Q  218 tcattacttg 227  Q
    | ||||||||    
T  22567871 ttattacttg 22567862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 21679768 - 21679927
Alignment:
Q  68 aaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctctgaccctgatatcttttatt-ttataccgtcaatttaaaataagtaacgcga 165  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| | |||  || || ||||| || || |||||| | |||| ||||||| |||    
T  21679768 aaaacaggtaacttgctcagttgcaaatagataaaaattgcaaatctctaatcct-ttaactcttattattttatcgtcaactaaaaaaaagtaacacga 21679866  T
Q  166 gctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
      ||||| ||||||| || ||||| |||||||| ||||| ||||||||||||| |||||||    
T  21679867 attgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattactt 21679927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 56 - 227
Target Start/End: Original strand, 22410234 - 22410404
Alignment:
Q  56 tttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaa-tttaaa 152  Q
    |||||||||||||||| ||| || |||||||||||||||| |||||||||||||||   ||| |||||  |||||||||  ||||| |||||| || |||    
T  22410234 tttctgcaaccaaaaataggaaaacttgctctgttgcaaacagataaaaattgcaagattctaaccct--tatctttta--ttatatcgtcaacttaaaa 22410329  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||| ||  |||||  | ||||||| |||||||||||||| ||||| |||||||||| || ||||||||    
T  22410330 ataagtaacgtgaattgtttgaatgaaacgacaatccctgtggatacgatactctacttatcattttattacttg 22410404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 23645673 - 23645844
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||| ||||||||||| || |||||||||||||||||||| | |||||||||||||||||| ||||| |  |||||||||||||    |   |  |||||    
T  23645673 ttttatgcaaccaaaa-catgtaacttgctctgttgcaaacaaataaaaattgcaatctctaaccctcaactcttttattttattttattgttcaaaaat 23645771  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    || |||||  |  ||||| |||||||||| ||||||| |||||| ||||| ||||||||||||| ||||||||    
T  23645772 aattaacgataattgtttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttg 23645844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 25927223 - 25927380
Alignment:
Q  68 aaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc-tgaccctgatatcttttatt-ttataccgtcaatttaaaataagtaacgcga 165  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||| |  ||||||||| || ||  |    |||| ||||||||||| ||    
T  25927223 aaaacaggtaacttgctctattgcaaacagataaaaattgcaatctcttaaccctaaactcttttattattttattg----tttagaataagtaacgtga 25927318  T
Q  166 gctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
      ||||| |||||||| ||||||| |||||||| ||||  ||||||||||||| ||||||||    
T  25927319 attgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttg 25927380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 9516884 - 9516809
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattact 225  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||||||| ||||| ||||||||||||| ||||||    
T  9516884 aaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattact 9516809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 23844465 - 23844542
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||||| ||||| |||||||||| ||||||| | |||||||||| |||||||||| || ||||||||    
T  23844465 aaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattacttg 23844542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 14637104 - 14637012
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaa 104  Q
    ||||||||||||||||||| |||| || || |||||| ||  |||||||||||||||||||||| |||||||||||||| ||  |||||||||    
T  14637104 aatataaatagggggattcgaagaatcctattcgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgtaataagataaaaa 14637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 23143893 - 23143748
Alignment:
Q  77 aacttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaattt--aaaataagtaacgcgagctgttta 173  Q
    |||||| ||||||| ||| |||||||||||| || ||||| ||| |  |||||||||  ||||| |||||| ||  ||||||||||||  ||  |||||     
T  23143893 aacttgatctgttgtaaacagataaaaattgaaactctctaacctt--tatctttta--ttatatcgtcaacttacaaaataagtaacatgaattgtttg 23143798  T
Q  174 gacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  23143797 gacgaaacgacaatccctgtggatatgatactctacttatcactttatta 23143748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 21688713 - 21688871
Alignment:
Q  68 aaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagc 167  Q
    |||| ||||||||| |||| || |||| | |||||||| ||||||||| |||   |  |||||||||||||| | |||| | ||||||||||||||||      
T  21688713 aaaataggtaacttcctctattacaaacatataaaaatcgcaatctctaacctctaactcttttattttatatcttcaactcaaaataagtaacgcgaat 21688812  T
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    | ||| || | ||||| ||||||| ||||||  |||| ||||||||||||| |||||||    
T  21688813 tttttggatgtaacgacaatccctatggatacaatactctacttatcacttgattactt 21688871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 9726120 - 9726044
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| |  ||||| |||||||||| ||||| |||||||| ||||| ||||||||||||| ||||||||    
T  9726120 aaataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttg 9726044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 19244767 - 19244668
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagat-aaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaa 153  Q
    |||||| ||||||||  ||||||||||||||||||||||| || | ||||| |||||||||| ||||| || |||||||||||||| | |||| ||||||    
T  19244767 ttttctacaaccaaac-caggtaacttgctctgttgcaaacagttcaaaaagtgcaatctctaaccctcatctcttttattttatatcatcaacttaaaa 19244669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 22566163 - 22566239
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||||  || ||||||||| ||| ||| | |||||||||||||| ||||||||||||| ||||||||    
T  22566163 aaataagtaacgcgaattgcttagacgaagcgacaattcttgtggatatgatactctacttatcactttattacttg 22566239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 24252137 - 24252215
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattt 135  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||| |||| ||| ||||| || ||||||||||    
T  24252137 tttctgcaaccaaaa-cacgaaacttgctctgttgcaaacagataaaaattacaatatctaaccctcatctcttttattt 24252215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 23231983 - 23232060
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||||  ||||| |||||| ||| ||| | | |||||||||||| ||||||||||||| ||||||||    
T  23231983 aaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcactttattacttg 23232060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 11136090 - 11136034
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    |||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  11136090 ttttttgcaaccaaaaacaggtaagttcgctctgttgcaaacagataaaaattgcaa 11136034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 27124369 - 27124452
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattg 107  Q
    ||||||||||||| |||||| ||||| ||  |||||||||||| || |||||| |||||||||||||||||| | ||||||||||    
T  27124369 ggggattcaaagaatcttaaccgctgcttacttttctgcaacc-aagacaggtaaacttgctctgttgcaaacatataaaaattg 27124452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 20005824 - 20005879
Alignment:
Q  56 tttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||||||| |||| ||||||||||||| | |||||||||||||    
T  20005824 tttctgcaaccaaaaacaggtaaactcgctctgttgcaaacaaataaaaattgcaa 20005879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 17827092 - 17827168
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    ||||||||||||||||  ||||| || ||||||| ||||| |||||||| ||||| ||| |||| |||| |||||||    
T  17827092 aaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttataactttattactt 17827168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 25781971 - 25781916
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||  |||||| |||||||||||||||| |||||||||||||||    
T  25781971 ttttctgcaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaa 25781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 17827001 - 17827056
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||||| ||||  |||| ||||||||| | |||||||||||||    
T  17827001 ttttctgcaaccaaaaacaagtaaactgctatgttgcaaacatataaaaattgcaa 17827056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 9898867 - 9898923
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatct 113  Q
    ||||||||||||||||  |||||||||| ||| ||||||| ||||||||||||||||||    
T  9898867 ttttctgcaaccaaaat-aggtaacttgttct-ttgcaaacagataaaaattgcaatct 9898923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 17729232 - 17729174
Alignment:
Q  169 gtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||| |||||||||| ||||  |||||||| ||||| ||||||||||||| ||||||||    
T  17729232 gtttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttg 17729174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 22566067 - 22566125
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatct 113  Q
    |||||| ||| |||||| ||||||||||   ||||||||| ||||||||||||||||||    
T  22566067 ttttctacaatcaaaaataggtaacttgtagtgttgcaaacagataaaaattgcaatct 22566125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 20005903 - 20005956
Alignment:
Q  174 gacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||||| ||| |||| ||||| || |||||||||| ||||||||    
T  20005903 gacgaaacgaaaatccatgtagatacgatactctgcttatcactttattacttg 20005956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 17299832 - 17299908
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| |  ||||| ||| |||||| ||||||  || ||| ||||| ||||||||||||| ||||||||    
T  17299832 aaataagtaacgcaaattgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttg 17299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 24657374 - 24657425
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaatt 106  Q
    |||||||||||||||| ||||||| || ||||||||||||| |||||||||||    
T  24657374 ttttctgcaaccaaaa-caggtaaattcgctctgttgcaaacagataaaaatt 24657425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 16245593 - 16245806
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aat 111  Q
    |||||||||||||||||||  ||| |  ||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16245593 aatataaatagggggattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaaat 16245692  T
Q  112 ctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactt 211  Q
    |||| ||||| |  |||||||||||||   |||||  |||||||||||||| ||  ||||| ||||||| || ||||| |||||||||||||| ||||||    
T  16245693 ctctaacccttaactcttttattttat--tgtcaaactaaaataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctactt 16245790  T
Q  212 atcacttcattacttg 227  Q
    ||||||| ||||||||    
T  16245791 atcactttattacttg 16245806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 12805796 - 12805967
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||  ||||||| || |||||||||||| |||||||||||||||||||| |||||   ||||||||||||||| |||| | |||||||    
T  12805796 ttttctgcaaccaaat-caggtaattttctctgttgcaaacagataaaaattgcaatctctaaccctttaatcttttattttataacgtcgacttaaaat 12805894  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||| |  ||||| || ||||||| ||||| |||||||||||||| ||||||||||||| ||||||||    
T  12805895 aagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctacttatcactttattacttg 12805967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 21302153 - 21301940
Alignment:
Q  15 tataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaat-c 112  Q
    |||||| |||||||||| |||| || ||| ||||||||  |||||||||| |||||| |||||| |||||||||||||||| ||||||||||| |||  |    
T  21302153 tataaacagggggattcgaagaatcctaaccgctgtttatttttctgcaatcaaaaaaaggtaaacttgctctgttgcaaacagataaaaattccaacac 21302054  T
Q  113 tctgaccctgatatcttttattttataccgtcaattta---aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactac 209  Q
    ||| ||||  |||||||||||| |||  ||||||||||   ||||||||||| |||  ||||| ||||||| || ||||| |||||||| ||||| ||||    
T  21302053 tctaaccc--atatcttttattatat--cgtcaatttacaaaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctac 21301958  T
Q  210 ttatcacttcattacttg 227  Q
    ||||||||| ||||||||    
T  21301957 ttatcactttattacttg 21301940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 3116325 - 3116495
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctc-tgaccctgatatcttttattttataccgtcaatttaaa 152  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | ||||| || || ||||||||||  |||||| |||||    
T  3116325 ttttctgcaaccaaaaccaggtatcttgctctgttgcaaacagataaaaattgcaaatctcttaacccttatctc-tttattttat--cgtcaacttaaa 3116421  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||| ||  ||||| |||||||||| ||||||||||||||  |||| | ||||||||||| ||||||||    
T  3116422 ataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttg 3116495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 21325534 - 21325362
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccc-tgatatcttttattttataccgtcaatttaaaa 153  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||| | |  |||||||||||||| ||| || ||||||    
T  21325534 ttttctgcaaccaaatt-aggtaacttgctctgttgcaaatagataaaaattgcaatctctaacccttcaactcttttattttatatcgttaacttaaaa 21325436  T
Q  154 taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||| | |  ||||| |||||||||| |||   |||||||| |||||  ||||||||| || ||||||||    
T  21325435 taagtaacacaaattgtttggacgaaacgacaatttttgtggatacgatactatacttatcagtttattacttg 21325362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 41508602 - 41508385
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aat 111  Q
    |||||||| ||||||||||||||| |||||| ||||| ||  |||||||||||| |||||| |||||||||| ||||||||| ||||| ||||||| |||    
T  41508602 aatataaagagggggattcaaagaatcttaaccgctggttacttttctgcaacc-aaaacatgtaacttgctttgttgcaaacagatacaaattgcaaat 41508504  T
Q  112 ctctgaccctgatatcttttattttataccgtc-aatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactact 210  Q
    |||| ||||| |  |||||||||||||  |||| |||| ||||||||||| || |  ||||| ||| |||||| |||||| |  |||| ||||  ||||     
T  41508503 ctctaacccttaactcttttattttat--cgtcaaattaaaaataagtaatgcaaattgtttggactaaacgacaatccccgcagatacgatattctacc 41508406  T
Q  211 tatcacttcattacttgataa 231  Q
    |||||||| ||||||||||||    
T  41508405 tatcactttattacttgataa 41508385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 215
Target Start/End: Original strand, 21303228 - 21303419
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    |||||||||||| | || ||| ||||| ||  |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| |||||     
T  21303228 gggggattcaaataatcctaaccgctgcttacttttctgcaaccaaaa-caagtaacttgctctgttgcaaacagataaaaattgcaatctctaaccctt 21303326  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
       ||||||||||||||  ||||| |||||||||||||||  |  ||||| || ||||| | ||||  ||||| || ||||| ||||||||||    
T  21303327 tactcttttattttatatagtcaacttaaaataagtaacggaaattgtttggatgaaacaacaatctttgtggctacgatactctacttatca 21303419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 5508528 - 5508358
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa-tctctga-ccctgatatcttttattttataccgtcaatttaaa 152  Q
    ||||||||||| ||||||| |||||||||||| ||||||| ||||||||||| ||| ||||| | |||| || ||||| |||||||  |||||  |||||    
T  5508528 ttttctgcaacaaaaaacatgtaacttgctctattgcaaacagataaaaatttcaaatctcttaacccttatctcttt-attttat--cgtcaccttaaa 5508432  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||| ||||| |||||||||| ||||| ||||||||| |||| | ||||||||||| ||||||||    
T  5508431 ataagtaacgcgagatgtttggacgaaacgacaatccatgtggatattatactc-acttatcactttattacttg 5508358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 10745093 - 10744924
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |  |||||||  |||||   |   ||||||||    
T  10745093 tttctgcaaccaaaa-caggtaacttgctctgttgcaaatagataaaaattgcaaatctcttaccctcaactctttta--ttataattttgttttaaaat 10744997  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    || ||| | ||  |||||||||||||||| ||||||| |||| | ||||| ||||||||||||| ||||||||    
T  10744996 aattaatgtgatttgtttagacgaaacgacaatccctatggaaacgatactctacttatcactttattacttg 10744924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 8319188 - 8319061
Alignment:
Q  100 aaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatat 199  Q
    |||||||||||||||| || || || |||| ||||||||| | |||| ||||||||||||||  ||  |||||  ||||||||| ||||||||||||||     
T  8319188 aaaaattgcaatctctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgtttgtacgaaacgataatccctgtggatac 8319089  T
Q  200 gatacactacttatcacttcattacttg 227  Q
     |||  ||||||||||||||||||||||    
T  8319088 tatattctacttatcacttcattacttg 8319061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 17156015 - 17155880
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctga 123  Q
    ||||||||||| |||| ||||||||  ||  ||||||||||||||| |  ||||||||||||||||||||| |||||||||||||||| ||| ||||  |    
T  17156015 ggggattcaaatagtcctaatcgctacttacttttctgcaaccaaata--ggtaacttgctctgttgcaaacagataaaaattgcaatttctaacccgta 17155918  T
Q  124 tatcttttattttataccgtcaatttaaaataagtaac 161  Q
      |||||| ||||||| ||| ||  |||||||||||||    
T  17155917 actctttttttttatatcgttaaactaaaataagtaac 17155880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 2723712 - 2723846
Alignment:
Q  26 ggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaa-ttgcaatctctgaccctgat 124  Q
    ||||||||| |||||||| ||||| ||  |||| ||||||||||  ||||||||||||| ||||||||| ||||||||| ||||||| ||| ||||| |     
T  2723712 ggattcaaatagtcttaaccgctgcttacttttttgcaaccaaa--caggtaacttgctttgttgcaaacagataaaaatttgcaatatctaacccttaa 2723809  T
Q  125 atcttttattttataccgtcaatttaaaataagtaac 161  Q
     || ||||||||||| | ||||  |||||||||||||    
T  2723810 ctcatttattttatatcatcaaactaaaataagtaac 2723846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 2167481 - 2167694
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aat 111  Q
    ||||||||||||||||||| |||| || ||| | ||  ||  |||||  ||||| ||||||||||||||| | ||||||||| ||||||||||||| |||    
T  2167481 aatataaatagggggattcgaagaatcctaaccacttcttacttttccacaacc-aaaacaggtaacttggtatgttgcaaacagataaaaattgcaaat 2167579  T
Q  112 ctctgaccctgatatcttttattttataccgtc-aatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactact 210  Q
    |||| ||| |    ||||||||||||||  ||| || | ||||||||||| | ||  ||||| |||||||||| | |   |||||||| ||||| |||||    
T  2167580 ctctaaccatttactcttttattttata--gtcaaactaaaaataagtaatgtgaattgtttggacgaaacgacattttatgtggatacgatactctact 2167677  T
Q  211 tatcacttcattacttg 227  Q
    |||||||| ||||||||    
T  2167678 tatcactttattacttg 2167694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 821515 - 821591
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||  ||  |||||| ||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||    
T  821515 aaataagtaacatgaattgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttg 821591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 21825775 - 21825834
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||    
T  21825775 ttttctgcaaccaaaaa-aggtaacttgctatgttacaaacagataaaaattgcaatctct 21825834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 18736578 - 18736748
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattt--tataccgtcaatttaa 151  Q
    |||||||||||||||| ||||||||||| || |||||||| | |||||||||  || ||||| ||||| |  |||||||||   | ||| ||   |||||    
T  18736578 ttttctgcaaccaaaa-caggtaacttgttcggttgcaaacaaataaaaattaaaaatctctaacccttaactcttttattcactttactgt---tttaa 18736673  T
Q  152 aataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||| |||||||||||||||| ||  ||||| |||| ||||  |||||||| |||| ||||||||    
T  18736674 aataagtaacgcgagttgtttagacgaaacgacaacacctgtagatacgatattctacttat-actttattacttg 18736748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 21825870 - 21825943
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattact 225  Q
    ||||||||||||||| |||||| |||||||| ||||||| |||||||| ||||| ||||||| ||||| ||||||    
T  21825870 aaataagtaacgcgaactgtttggacgaaacaaaaatccatgtggatacgatactctactta-cactttattact 21825943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 13908246 - 13908303
Alignment:
Q  170 tttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||| ||||||| ||||||| |||||||||||| ||||||||||||| ||||||||    
T  13908246 tttagatgaaacgataatccctatggatatgatactctacttatcactttattacttg 13908303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 17438287 - 17438391
Alignment:
Q  7 tcgaagaatataaatag-ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaac-ttgctctgttgcaaatagataaaaa 104  Q
    ||||| ||||||||||| |||||||| |||| || ||| || || ||  |||||||||||||||| |||||||  ||||||||||||||| |||||||||    
T  17438287 tcgaacaatataaatagaggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaa-caggtaaaattgctctgttgcaaacagataaaaa 17438385  T
Q  105 ttgcaa 110  Q
    ||||||    
T  17438386 ttgcaa 17438391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 17438431 - 17438496
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
    ||||||||||||| ||  ||||| |||||||||| ||||| |||||||||||||| ||||||||||    
T  17438431 aaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctacttatca 17438496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 6290001 - 6289925
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||| ||||  ||| || |||||| || ||||| |||||||||||||| ||||||||||||| ||||||||    
T  6290001 aaataagtaatgcgaattgtctacacgaaatgataatccatgtggatatgatactctacttatcactttattacttg 6289925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 10918016 - 10917944
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatta 223  Q
    ||||| |||| |||| ||||||||||||||| | ||||| |||||||| ||||| ||||||||||||| ||||    
T  10918016 aaataggtaatgcgaactgtttagacgaaacaacaatccatgtggatacgatactctacttatcactttatta 10917944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 16229859 - 16229915
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    |||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  16229859 ttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 16229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 8446050 - 8445932
Alignment:
Q  19 aatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgac 118  Q
    |||||||||||||||||| || ||| | ||| ||   |||||||||||||    |||||||||| |||||||||||  ||||||||||||||||||| ||    
T  8446050 aatagggggattcaaagaatcctaaccactgcttacatttctgcaaccaatgg-aggtaacttgttctgttgcaaactgataaaaattgcaatctctaac 8445952  T
Q  119 cctgatatcttttattttat 138  Q
    ||  |  |||||||||||||    
T  8445951 cccaaactcttttattttat 8445932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 8765330 - 8765244
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||| |||| ||||||  |||| ||  |||||||||||||||| ||||||| |||||||||||||||| | |||||||||||||    
T  8765330 ggggattcgaagaatcttaactgctgcttacttttctgcaaccaaaa-caggtaaacttgctctgttgcaaacatataaaaattgcaa 8765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 8557130 - 8557204
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattact 225  Q
    ||||||||||||| |  |||||| | ||||||| ||||| |||||||| ||||| ||||||||||||| ||||||    
T  8557130 aaataagtaacgcaaattgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttattact 8557204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 4650419 - 4650364
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||| ||||||| ||||||| |||||||| |||||||||||||||    
T  4650419 ttttctgcaaccaaaa-caggtaaacttgctccgttgcaaacagataaaaattgcaa 4650364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 8170065 - 8170013
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaatt 106  Q
    |||||||||||||||||||||||| || ||| ||||||||| |||||||||||    
T  8170065 ttttctgcaaccaaaaacaggtaaattcgctatgttgcaaacagataaaaatt 8170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 8770201 - 8770146
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||| ||||||| |||||||||||||||| | |||||||||||||    
T  8770201 ttttctgcaaccaaaa-caggtaaacttgctctgttgcaaacatataaaaattgcaa 8770146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 12754797 - 12754881
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattg 107  Q
    |||||||| |||| || ||| ||||| ||  |||||||||||||||| ||||| |||| ||||||||||||| | ||||||||||    
T  12754797 ggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaacaaataaaaattg 12754881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 28729038 - 28728962
Alignment:
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||||||  ||||| |  ||||||| ||||  |||||||| ||||| ||||||||||||| ||||||||||||    
T  28729038 aagtaacgcgaattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttgataa 28728962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 4650328 - 4650253
Alignment:
Q  152 aataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||  ||||| | ||||| || |||||||||||||| |||||  |||| ||||||| ||||||||    
T  4650328 aataagtaacgcgaattgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttattacttg 4650253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 8889152 - 8889231
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgat 229  Q
    ||||||||||||| ||  ||||   |||||| || ||||||||||||||  |||| ||||||||||||| ||||||||||    
T  8889152 aaaataagtaacgagaattgttcgaacgaaaggacaatccctgtggatacaatactctacttatcactttattacttgat 8889231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 19908501 - 19908442
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaatct 113  Q
    ||||||||||||||||| |||| |||||||| ||||||||| | ||||||||| ||||||    
T  19908501 ttttctgcaaccaaaaataggtaaacttgctttgttgcaaaaaaataaaaattccaatct 19908442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 19171834 - 19171911
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||| || |  ||||| |||||||||| ||||| |||| ||||||| | || |||||||||| ||||||||    
T  19171834 aaaataagtaatgcaaattgtttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactttattacttg 19171911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 19925623 - 19925700
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||||  | ||| ||||||| || ||||| |||||||| ||||| |||| |||||| | ||||||||    
T  19925623 aaaataagtaacgcgaattatttggacgaaaagacaatccatgtggatacgatactctacatatcaccttattacttg 19925700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 27413802 - 27413855
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattg 107  Q
    |||||||||||||||||||||| || | ||||||||| ||| ||||||||||||    
T  27413802 ttttctgcaaccaaaaacaggtaaaatcgctctgttgaaaacagataaaaattg 27413855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 932936 - 932884
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattg 107  Q
    ||||||||||||||||  ||  |||||||||||||||||| | ||||||||||    
T  932936 ttttctgcaaccaaaacaagtaaacttgctctgttgcaaacaaataaaaattg 932884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 8883028 - 8883084
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||| ||||| |||||| || ||| ||||||||| |||||||||||||||    
T  8883028 ttttctgcaactaaaaataggtaaactcgctatgttgcaaacagataaaaattgcaa 8883084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 18458465 - 18458505
Alignment:
Q  191 tgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||| ||||| ||||||||||||| ||||||||||||    
T  18458465 tgtggatacgatactctacttatcactttattacttgataa 18458505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 19576126 - 19576182
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttg-ctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||| |||||| ||  || ||||||||| |||||||||||||||    
T  19576126 ttttctgcaaccaaaaataggtaaattcactttgttgcaaacagataaaaattgcaa 19576182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 26 - 227
Target Start/End: Complemental strand, 22664429 - 22664228
Alignment:
Q  26 ggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatct-ctgaccctgat 124  Q
    |||||||||||||| ||| ||||  ||  |||||||||||||||| || ||||||||||||||| |||| | |||||||||||||| | || ||||| ||    
T  22664429 ggattcaaagagtcctaaccgctacttacttttctgcaaccaaaa-catgtaacttgctctgttacaaacaaataaaaattgcaatttactaacccttat 22664331  T
Q  125 atcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattac 224  Q
     |||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| ||||||||| ||||||| ||||| ||||||||||||| |||||    
T  22664330 ctcttttattttatatcgtcaacttaaaataagcaacgcgagttgtttagacgaaatgaaaatcccagtggataagatactctacttatcactttattac 22664231  T
Q  225 ttg 227  Q
    |||    
T  22664230 ttg 22664228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 77 - 227
Target Start/End: Complemental strand, 147801 - 147653
Alignment:
Q  77 aacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagac 176  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||| || |||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  147801 aacttgctctgttgcaaatagataaaa-ttgaaatctctaacccttatctcttttattt-atatcgtcaaattaaaataagtaacgcgagctgtttagac 147704  T
Q  177 gaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||| || ||||| |||| ||||||||| | ||||||||||| ||||||||    
T  147703 gaaatgacaatccatgtgaatatgatactccacttatcactttattacttg 147653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 33190909 - 33190695
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||| ||||| |||||| || ||| ||||| ||  |||||||||| ||||  |||||||||||| |||||||||| | ||||||||| ||||||||    
T  33190909 ataaatagagggatccaaagaatcctaaccgctgcttacttttctgcaatcaaac-caggtaacttgcactgttgcaaacaaataaaaattacaatctct 33190811  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
     | ||| |  | |||||||||||| |||||| |||||||||||||| |||| |||||||| ||||||| |||   ||||||||| |||| ||||||||||    
T  33190810 aaaccttaactattttattttatatcgtcaacttaaaataagtaacacgagttgtttagatgaaacgacaattgttgtggatattatactctacttatca 33190711  T
Q  216 cttcattacttgataa 231  Q
     || ||||||||||||    
T  33190710 ttttattacttgataa 33190695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 9787742 - 9787956
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatc 112  Q
    |||||| ||| |||||||||||||||  ||| |||   ||  |||||||||||||||||||||| ||||||||||||||||| || | ||||||||||||    
T  9787742 aatatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgttgcaaacagttcaaaattgcaatc 9787841  T
Q  113 tctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactta 212  Q
    ||| |||||  | |||| ||||||||| | | || |||||||||||||   ||| |||||||||||||||| |||   | |||||| ||||| |||||||    
T  9787842 tctaacccttttctcttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctactta 9787941  T
Q  213 tcacttcattacttg 227  Q
    |||||| ||||||||    
T  9787942 tcactttattacttg 9787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 18100880 - 18101022
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    ||||||| ||||||||||| | || ||| ||||| ||  |||||||||||||||| || |||||||||| ||||||||| |||||||||||||||| |||    
T  18100880 ataaatacggggattcaaataatcataaccgctgcttacttttctgcaaccaaaa-catgtaacttgctatgttgcaaacagataaaaattgcaatttct 18100978  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagta 159  Q
     ||||| |  |||| ||||||||| |||||| ||||||||||||    
T  18100979 aacccttaactcttctattttatatcgtcaaattaaaataagta 18101022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 56 - 227
Target Start/End: Original strand, 23037918 - 23038088
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccc-tgatatcttttattttataccgtcaat-ttaaaa 153  Q
    |||||||||||||||||| |||||||||| ||||||||| ||| |||||||| ||| ||| | || | || |||||||||||||  | ||||  ||||||    
T  23037918 tttctgcaaccaaaaacaagtaacttgctatgttgcaaacagaaaaaaattgtaatttctcaaccattatctcttttattttat--catcaaacttaaaa 23038015  T
Q  154 taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||| ||| ||||| |||||||||| ||||| |||||||| ||||| | ||||||||||| ||||||||    
T  23038016 taagtaacgagagttgttttgacgaaacgacaatccatgtggatacgatactc-acttatcactttattacttg 23038088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 69 - 227
Target Start/End: Complemental strand, 24281457 - 24281299
Alignment:
Q  69 aaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagct 168  Q
    ||||| ||||||| ||||||| |||| ||||| |||||||||||||| |||||    ||||||||||||||  ||||| |||||||||||||||| |  |    
T  24281457 aaacatgtaactttctctgtttcaaacagatagaaattgcaatctctaaccctttactcttttattttatattgtcaacttaaaataagtaacgcaaatt 24281358  T
Q  169 gtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||  ||  |||||| ||||| |||||||||||||  ||||||||||||| ||||||||    
T  24281357 gttcggaaaaaacgataatccatgtggatatgataatctacttatcactttattacttg 24281299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 15807886 - 15808046
Alignment:
Q  16 ataaatag-ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc 114  Q
    |||||||| ||||||||||||| || ||||||||| ||  |||||| ||||||||| | ||||||||||||||||||||| | |||||||||||||||      
T  15807886 ataaatagtggggattcaaagaatcctaatcgctgcttatttttctacaaccaaaa-ctggtaacttgctctgttgcaaacaaataaaaattgcaatcct 15807984  T
Q  115 tgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagac 176  Q
    | ||| | |  |||||||||||||| | ||||  |||||||||||| ||||| |||||||||    
T  15807985 taaccattaactcttttattttatatcttcaaactaaaataagtaatgcgagttgtttagac 15808046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 31235911 - 31236124
Alignment:
Q  13 aatataaataggggga-ttcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||| |||| |||||||| |||||| || || ||  |||| |||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  31235911 aatataaatagagggaattcaaagaatcttaaccgttgcttacttttatgcaaccaaaaacaagtaaacttgctctgttgcaaagagataaaaattgcaa 31236010  T
Q  111 -tctctgaccctgatatcttttattttataccgtcaa-tttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacacta 208  Q
     ||||| |||||  ||| |||||  ||||| |||||| || ||||||||||||||||  | ||| ||| |||||| ||||  ||| ||||| |||| ||     
T  31236011 ctctctaaccct--tatatttta--ttatatcgtcaacttaaaaataagtaacgcgaattatttggacaaaacgacaatctttgtagatataatactctg 31236106  T
Q  209 cttatcacttcattactt 226  Q
    |||||||||| |||||||    
T  31236107 cttatcactttattactt 31236124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 28008338 - 28008193
Alignment:
Q  16 ataaatagggg-gattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc 114  Q
    ||||||||||| |||||||||| || ||| ||||| ||  |||||||||||||||| || |||| ||||||| ||| ||| |||||||||||||||||||    
T  28008338 ataaataggggagattcaaagaatcctaaccgctgcttacttttctgcaaccaaaa-caagtaatttgctctattggaaacagataaaaattgcaatctc 28008240  T
Q  115 tgaccctgatatcttttattttataccgtcaatttaaaataagtaac 161  Q
    | | |||    |||||||||||||| |||||| ||||||||||||||    
T  28008239 taatcctttactcttttattttatatcgtcaacttaaaataagtaac 28008193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 24214770 - 24214566
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||||||||||||||| ||| ||||  ||  |||||||||||||||  |||||||||||  ||      || ||||||||||| |||| ||     
T  24214770 ataaatagggggattcaaagagtcctaaccgctacttatttttctgcaaccaaac-caggtaacttggcct------aacagataaaaattccaatttca 24214678  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
     ||||| |  |||||||||||||| |||| | |||||||||||||||  || |||||||||||||| | ||||| ||||||||   |||  |||||||||    
T  24214677 aacccttaattcttttattttatatcgtccacttaaaataagtaacgtaagttgtttagacgaaacaacaatccatgtggatacagtactgtacttatca 24214578  T
Q  216 cttcattacttg 227  Q
    ||| ||||||||    
T  24214577 ctttattacttg 24214566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 12012680 - 12012797
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||||||| |||| || |||||| |||||  |||| ||||||||||| ||||||||| ||| ||||||||| | ||||||||||||||||||    
T  12012680 ataaatagggggattcgaagaatcctaatcgttgtttacttttgtgcaaccaaaa-caggtaactcgctatgttgcaaacaaataaaaattgcaatctct 12012778  T
Q  116 gaccctgatatcttttatt 134  Q
     ||||| |  |||||||||    
T  12012779 aacccttaactcttttatt 12012797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 13345200 - 13345413
Alignment:
Q  13 aatataaataggggg-attcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa- 110  Q
    ||||||||||||||| |||| || | || ||| ||||||||  ||||||  |||||||| ||||||||| ||| ||||  ||||||||||||| |||||     
T  13345200 aatataaataggggggattcgaaaaatcctaaccgctgtttacttttcttaaaccaaaa-caggtaact-gctatgttttaaatagataaaaactgcaaa 13345297  T
Q  111 tctctgaccctgatatcttttattttataccgtcaattta-aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactac 209  Q
    ||| | ||| | |  |||||||||||||  ||||||  || |||||||||||||||  ||||| ||| |||||| ||||| |||||||||||||| ||||    
T  13345298 tctttaacctttaactcttttattttat--cgtcaaactataaataagtaacgcgaattgtttggacaaaacgacaatccatgtggatatgatactctac 13345395  T
Q  210 ttatcacttcattacttg 227  Q
    ||||||||| ||||||||    
T  13345396 ttatcactttattacttg 13345413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 231
Target Start/End: Original strand, 15813061 - 15813235
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatc-tctga-ccctgatatcttttattttataccgtcaatttaaa 152  Q
    |||| ||||| |||| |||||||||||||| ||||| ||| | ||||||||||||| | ||| | |||| || ||||| |||||||  |||||| |||||    
T  15813061 ttttttgcaagcaaagacaggtaacttgctatgttggaaacatataaaaattgcaaacctcttaacccttatctcttt-attttat--cgtcaaattaaa 15813157  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||||| ||| ||||| |||| ||||||||||| |||||||| ||||  | ||||||||||| ||||| ||||||    
T  15813158 ataagtaacgagagttgtttggacgcaacgaaaatccttgtggatacgatagtc-acttatcactttattacatgataa 15813235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 12208700 - 12208623
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||  ||||||||||||| ||||||||    
T  12208700 aaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctacttatcactttattacttg 12208623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 227
Target Start/End: Original strand, 25405536 - 25405707
Alignment:
Q  56 tttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaatct--ctgaccctgatatcttttattttataccgtcaattta-- 150  Q
    |||||||||||||||||| |||| |||||||||||||||| | ||||||||||||| ||  || ||||| | |       ||||||| |||||| |||      
T  25405536 tttctgcaaccaaaaacaagtaaacttgctctgttgcaaacaaataaaaattgcaagctttctaacccttaaac------ttttatatcgtcaacttaca 25405629  T
Q  151 -aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
     |||||||||||| || |||||| |||||||||| ||||| |||||||| |||||  |||||||||||| ||||||||    
T  25405630 aaaataagtaacgtgaactgtttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttg 25405707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 21973071 - 21973164
Alignment:
Q  16 ataaatagggggattcaaagagtctt--aatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc 108  Q
    |||||||||||||||| |||| || |  || ||||||| | |||||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  21973071 ataaatagggggattcgaagaatcctctaaccgctgttac-ttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgc 21973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 14779664 - 14779587
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||| ||||||||  ||||| |||||||||| |||||||||||||||||||| ||| ||||||| | ||||||||    
T  14779664 aaaataaataacgcgatatgtttggacgaaacgacaatccctgtggatatgatactctaattatcacattattacttg 14779587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 17359355 - 17359184
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaatttaaa 152  Q
    |||| ||||||||||||||||||| || ||| |||||| |  ||||||||||||||| ||||| |||||  ||||||||||| |||  ||||||  ||||    
T  17359355 ttttatgcaaccaaaaacaggtaaatttgctatgttgccagcagataaaaattgcaactctctaaccct--tatcttttattatat--cgtcaacctaaa 17359260  T
Q  153 a-taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    | ||||||||| ||  | ||| |||||||||| ||||  | |||||||||||| | ||||||||||| ||||||||    
T  17359259 aataagtaacgagaattatttggacgaaacgacaatctttatggatatgatactcaacttatcactttattacttg 17359184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 18736240 - 18736317
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||  |  |||||  ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  18736240 aaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttattacttg 18736317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 16360064 - 16360005
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||    
T  16360064 ttttctgcaaccaaaa-caggtaacttgctttgttgcaaacaaataaaaattgcaatctct 16360005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 16916851 - 16916907
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  16916851 ttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattgcaa 16916907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 17610129 - 17610213
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaatt 106  Q
    ||||| |||||||| || ||| ||||| ||  |||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  17610129 gggggtttcaaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaatt 17610213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 17837615 - 17837539
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||||  ||||||||| ||| || ||||| |||||||||||||| |||||||| |||| ||||||||    
T  17837615 aaataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttg 17837539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 226
Target Start/End: Complemental strand, 22620487 - 22620285
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgttt-cgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||| ||||| |||||| ||||| || | |||||| ||||||||| ||||||||| | | ||||||||| |||||||||  ||||||||| |||||     
T  22620487 ggggatttaaagaatcttaaccgctgcttacattttctacaaccaaaa-caggtaactcgatttgttgcaaacagataaaaaaggcaatctctaaccctc 22620389  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    |  || ||||||||||    |   || ||||||||||||| ||  | ||||||||||| || ||| ||| |||||| ||||| ||| ||||||||| |||    
T  22620388 aactcctttattttattttattgtttaaaaataagtaacgtgaattatttagacgaaaagacaattcctatggatacgatactctagttatcactttatt 22620289  T
Q  223 actt 226  Q
    ||||    
T  22620288 actt 22620285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 32382915 - 32382969
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaat 111  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  32382915 tttctgcaaccaaaa-caggtaatttgctctgttgcaaacagataaaaattgcaat 32382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 17610256 - 17610333
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| ||  ||||| |||||||||| ||||| |||||||| ||||| |||||||| |||| ||||||||    
T  17610256 aaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttattacttg 17610333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 21334591 - 21334672
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaa 104  Q
    ||||||||| |||| || ||| ||||||||  |||||| |||||||||| |||||||||||| | ||||||| |||||||||    
T  21334591 gggggattcgaagaatcctaaccgctgtttacttttcttcaaccaaaaataggtaacttgctattttgcaaacagataaaaa 21334672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 21666608 - 21666685
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| ||  ||||| ||||||| || ||||| |||||||| ||||| ||||||||||||| ||||||||    
T  21666608 aaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttg 21666685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 29242618 - 29242537
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||| |||||||||  ||||| || ||||||| |||| || |||||| ||||| ||||||||||||| ||||||||||||    
T  29242618 aaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattacttgataa 29242537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 16179200 - 16179144
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||| |||||| |||||||||||||||  |||||||||||||||    
T  16179200 ttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaa 16179144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 9401687 - 9401542
Alignment:
Q  68 aaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaattta---aaataagtaacg 162  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||| ||||| ||| |  ||||||||||| |||  |  ||| |||   ||||||||||||    
T  9401687 aaaacaggtaaacttactctgttgcaaacagataaaaattgcaactctctaaccgt--tatcttttattatat--caacaacttacaaaaataagtaacg 9401592  T
Q  163 cgagctgtttagacgaaacgaaaatccctgtggatatgatacactactta 212  Q
    |||  ||||| |||||||||| ||| | |||||||| ||||| |||||||    
T  9401591 cgaattgtttggacgaaacgacaattcatgtggatacgatactctactta 9401542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 15543966 - 15544043
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||| |||  ||||| |||||||||| |||  | ||||||| ||||| ||||||||||||| ||||||||    
T  15543966 aaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttattacttg 15544043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 3591654 - 3591734
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||||| ||||  ||||| ||| |||||| ||||  |||||||| ||||| ||| ||||||||| ||||||||||||    
T  3591654 aaataagtaaggcgaattgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataa 3591734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 14781771 - 14781827
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||||||||| || |||||||| |||||| | |||||||||||||    
T  14781771 ttttctgcaaccaaaaacaggtaaatttgctctgatgcaaacatataaaaattgcaa 14781827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 18736157 - 18736213
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||| |||| |||||||||| ||||||| |||||||| ||||||    
T  18736157 ttttctgcaaccaaaaataggtaaacttgctctattgcaaacagataaaatttgcaa 18736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 21449314 - 21449218
Alignment:
Q  13 aatataaatagg-gggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattg 107  Q
    |||||||| ||| ||||||| |||| || ||| ||||| ||  ||||||||| |||||||||| ||| |||||| ||||||||| ||||||||||||    
T  21449314 aatataaacaggagggattcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgcaaacagataaaaattg 21449218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 21987899 - 21987955
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaac-ttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||| |||||||||||||||||||  ||||||||||||||| | |||||||||||||    
T  21987899 ttttatgcaaccaaaaacaggtaaagttgctctgttgcaaacatataaaaattgcaa 21987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 22623084 - 22623029
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||    
T  22623084 ttttctgcaaccaaaa-caggtaaacttgctctgttgcaaatatataaaaatggcaa 22623029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 29242700 - 29242645
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  29242700 ttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 29242645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 155226 - 155183
Alignment:
Q  39 cttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttg 82  Q
    ||||| || |||||| ||||||||||||||||||||||||||||    
T  155226 cttaaccgttgtttccttttctgcaaccaaaaacaggtaacttg 155183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 17121367 - 17121465
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||  ||||| |||| || ||| ||||| ||  |||||||||||||||| || |||||||||||| ||||||| | || |||| ||||||||||    
T  17121367 ataaataggaagattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa-caagtaacttgctctattgcaaacaaatgaaaaatgcaatctct 17121465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 21449162 - 21449111
Alignment:
Q  176 cgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||| ||||| |||||||| ||||| ||||||||||||| ||||||||    
T  21449162 cgaaacgacaatccttgtggatacgatactctacttatcactttattacttg 21449111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 44795561 - 44795391
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctc-tgaccctgatatcttttattttataccgtcaatttaaaa 153  Q
    ||||||||||||||||||| ||||| ||| || |||||| | ||||||||||| |||||| | ||||| || | |||||||||||  | ||||  |||||    
T  44795561 tttctgcaaccaaaaacagataactcgctttgctgcaaacatataaaaattgcaaatctcttaacccttatct-ttttattttat--catcaacataaaa 44795465  T
Q  154 taagtaacgcgag-ctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||  ||||  | ||| |||||||||| ||||| |||||||| ||||| | ||||||| ||| ||||||||    
T  44795464 taagtaagtcgagtttttttggacgaaacgacaatccatgtggatacgatactc-acttatctctttattacttg 44795391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 16916933 - 16917015
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactta-tcacttcattacttgataa 231  Q
    ||||||||||||| ||  ||||  ||||||| || |||||||||||||| ||||| ||||||| | |||| ||||||||||||    
T  16916933 aaaataagtaacgagaattgttcggacgaaaggacaatccctgtggatacgatactctacttactaactttattacttgataa 16917015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 24306340 - 24306382
Alignment:
Q  185 aatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||    
T  24306340 aatccctgtggatacgatactctacttatcactttattacttg 24306382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 15543839 - 15543928
Alignment:
Q  22 agggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||| |||| || ||| || || ||  ||||||||||| |||||||||| ||||| || ||||||||| | |||||||||||||    
T  15543839 agggggattcgaagaatcctaaccgttgcttacttttctgcaacaaaaaacaggtaaacttactatgttgcaaacaaataaaaattgcaa 15543928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 16069551 - 16069628
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||  ||  |||| | ||||||||| |||||||||| ||||||||   |||||||||||| ||||||||    
T  16069551 aaaataagtaacaagaattgttcaaacgaaacgacaatccctgtgtatatgatattttacttatcactttattacttg 16069628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 16787726 - 16787807
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||||||||| |  ||||| | | |||||| ||||  |||| ||| ||||| ||||||||||||| ||||||||||||    
T  16787726 aaaataagtaacgcaaattgtttgggcaaaacgacaatctatgtgaatacgatactctacttatcactttattacttgataa 16787807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 18529097 - 18529149
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattg 107  Q
    |||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  18529097 ttttctacaaccaaaa-caggtaaacttgctctgttgcaaattgataaaaattg 18529149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 22622985 - 22622912
Alignment:
Q  154 taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||  | ||| ||||||| || |||||||  ||||||||||| ||||| ||||||| ||||||||    
T  22622985 taagtaacgcgaattttttggacgaaaggacaatcccttaggatatgatactctactaatcactttattacttg 22622912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 24054059 - 24053999
Alignment:
Q  168 tgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgat 229  Q
    |||| |||||||| || |||||||||||||| ||||| |||||||| |||| ||||||||||    
T  24054059 tgttgagacgaaaggacaatccctgtggata-gatactctacttattactttattacttgat 24053999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 25961032 - 25961085
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaa 69  Q
    |||||||||||||||||||||||| ||| ||||  ||  |||||||||||||||    
T  25961032 ataaatagggggattcaaagagtcctaaccgcttcttacttttctgcaaccaaa 25961085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 24267783 - 24267863
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||||||| ||  || ||||||||||| | ||||  | ||||||||||||  ||||||||| || ||||||||||||    
T  24267783 aaataagtaacgtgaattgattagacgaaacaacaatctatatggatatgatactatacttatcattttattacttgataa 24267863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 34481152 - 34481108
Alignment:
Q  66 caaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||||| |||| |||| | |||||||||||||    
T  34481152 caaaaacaggtaacttgctttgttccaaacatataaaaattgcaa 34481108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 960 - 750
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||||||||||||||| ||| ||||| || ||||||| ||||||||  |||||| ||| |||||||||||| || ||||||||| |||||||    
T  960 ataaatagggggattcaaagagtcctaaccgctgcttagttttctacaaccaaa--caggtatcttactctgttgcaaacaggtaaaaattgaaatctct 863  T
Q  116 gaccctgatatcttttattttataccgtcaatttaaaataagtaacg-cgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatc 214  Q
     ||||| |  |||||||||||||| | |||| ||||||||||||||| ||   ||||| |||||||||| ||||| ||| ||||  |||| |||||||||    
T  862 aacccttaactcttttattttatatcttcaacttaaaataagtaacgtcggattgtttggacgaaacgacaatccttgttgatacaatactctacttatc 763  T
Q  215 acttcattacttg 227  Q
    |||| ||||||||    
T  762 actttattacttg 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 39810 - 39606
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||||||||||||| ||| ||||| ||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |  ||     
T  39810 gggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaa-caggtaacttgctctgttgcaaacagataaaaattgcaatctctaattctt 39712  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgag-ctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcat 221  Q
    || |||||||||||||| |||||| ||||||||||||| | |||  | ||| ||| |||| | ||||  |||||||| ||| | ||||||||||||| ||    
T  39711 atctcttttattttatatcgtcaacttaaaataagtaaagtgagtttttttggacaaaacaacaatcaatgtggatacgatgctctacttatcactttat 39612  T
Q  222 tacttg 227  Q
    ||||||    
T  39611 tacttg 39606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 6e-32; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 34487830 - 34487660
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttatt-ttataccgtcaatttaaaa 153  Q
    |||||||||||||||  || |||| ||||||||||| ||| |||||||||||||||||||| ||||| || | ||||||| ||||| ||||||   ||||    
T  34487830 ttttctgcaaccaaa--catgtaaattgctctgttgaaaacagataaaaattgcaatctctaacccttatcttttttattattatatcgtcaaaacaaaa 34487733  T
Q  154 taagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||  |||||||||||||||| ||||| |||||||||||||  ||||||| ||||| ||||||||    
T  34487732 taagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctactta-cactttattacttg 34487660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 17171476 - 17171634
Alignment:
Q  72 caggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattt--tataccgtcaatttaaaataagtaacgcgagctg 169  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||| |  ||||||||||  |||   ||   |||||||||| ||||||||  ||    
T  17171476 caggtaacttgctctgttgcaactagataaaaattgcaatctctaaccctcaactcttttatttattattttgt---tttaaaataattaacgcgaattg 17171572  T
Q  170 tttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
     ||||||||||||| ||||| |||||||| ||| | ||||||||||||| ||||||||||||    
T  17171573 cttagacgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataa 17171634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 56 - 231
Target Start/End: Complemental strand, 18937940 - 18937766
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct-gaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||  ||||| |  || ||||||||||| | | || |||||||    
T  18937940 tttctgcaaccaaaaacatgtaacttgctctgttgcaaacagataaaaattgaaatctctcaacccttaactc-tttattttatatcattaacttaaaat 18937842  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||| ||  ||||| |||||||| | ||||||| || ||| |||||  |||||||||||| ||||||| ||||    
T  18937841 aagtaacgtgaattgtttggacgaaacaacaatccctctgaatacgatac-ttacttatcactttattacttaataa 18937766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 223
Target Start/End: Original strand, 19283730 - 19283928
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    ||||||||  || |||||||| ||||| ||  |||||| ||||||||  |||||||||| |||| |||||||||||| ||||||| ||||||| |||||     
T  19283730 gggggatttgaaaagtcttaaccgctgcttaattttctacaaccaaa--caggtaactttctctattgcaaatagattaaaattgtaatctctaaccctt 19283827  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcatt 222  Q
    |  ||||||| |||||| |||||| ||||||||||| | || |  ||||| |||||||||  ||| | ||||||||  |||| ||||||||||||| |||    
T  19283828 aactcttttactttatatcgtcaacttaaaataagttaagcaaattgtttggacgaaacgttaattcttgtggatacaatactctacttatcactttatt 19283927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 75 - 227
Target Start/End: Complemental strand, 22755696 - 22755543
Alignment:
Q  75 gtaacttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgttta 173  Q
    |||||||||||||||||||| |||||||||||| || ||||| ||||| |  |||||||||||||| ||| ||  |||||||| ||| || |  |||||     
T  22755696 gtaacttgctctgttgcaaacagataaaaattgtaaatctctaacccttaactcttttattttatatcgtaaaactaaaataaataatgccaattgtttg 22755597  T
Q  174 gacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    || ||||||| ||||| | |||||| ||||| ||||||||| ||||||||||||    
T  22755596 gaagaaacgacaatccttatggatacgatactctacttatctcttcattacttg 22755543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 226
Target Start/End: Original strand, 18208156 - 18208324
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattttataccgtcaatttaaaat 154  Q
    |||||||||||||||  |||||||||||||||  |||||| ||||||||||||||| |||  ||||| |  |||||||||||||| | ||||   |||||    
T  18208156 ttttctgcaaccaaa--caggtaacttgctctactgcaaacagataaaaattgcaacctccaacccttaactcttttattttatatcatcaaaacaaaat 18208253  T
Q  155 aagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    |||||||  ||  ||||| ||||||| || ||||| |||||||| ||||| ||||||| ||||| |||||||    
T  18208254 aagtaacatgaattgtttggacgaaaggacaatccatgtggatacgatactctactta-cactttattactt 18208324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 24245544 - 24245618
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattac 224  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||||||| ||||| ||||||||||||| |||||    
T  24245544 aaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattac 24245618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 25402242 - 25402414
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgatatcttttattttataccgtcaat-ttaaa 152  Q
    ||||||||||||| ||| ||| ||||  |||| || |||| ||||||||||||||| ||||| |||||    |||||||||||||   |||||  |||||    
T  25402242 ttttctgcaaccagaaataggaaactacctctattacaaacagataaaaattgcaaatctctaacccttcactcttttattttatt--gtcaaacttaaa 25402339  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||||||||||    ||  |||||||||| ||||||||||||||  |||| |||||||||||||| |||||||    
T  25402340 ataagtaacgcgaatcattaggacgaaacgacaatccctgtggatacaatactctacttatcacttccttacttg 25402414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 24266883 - 24267031
Alignment:
Q  79 cttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttatt-ttataccgtcaatttaaaataagtaacgcgagctgtttagacg 177  Q
    |||||| |||| |||| |||||||||||||||| ||| ||||| |  ||||||||| ||||| ||||||   |||||||||||| |||  ||||| |||     
T  24266883 cttgctttgttacaaacagataaaaattgcaatatctaacccttaactcttttattattatatcgtcaaaacaaaataagtaacacgaattgtttggaca 24266982  T
Q  178 aaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||| || ||||| |||||||| ||||| ||||||| ||||| ||||||||    
T  24266983 aaatgataatccttgtggatacgatactctactta-cactttattacttg 24267031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 24343514 - 24343662
Alignment:
Q  79 cttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttatt-ttataccgtcaatttaaaataagtaacgcgagctgtttagacg 177  Q
    |||||| |||| |||| |||||||||||||||| ||| ||||| |  ||||||||| ||||| ||||||   |||||||||||| |||  ||||| |||     
T  24343514 cttgctttgttacaaacagataaaaattgcaatatctaacccttaactcttttattattatatcgtcaaaacaaaataagtaacacgaattgtttggaca 24343613  T
Q  178 aaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||| || ||||| |||||||| ||||| ||||||| ||||| ||||||||    
T  24343614 aaatgataatccttgtggatacgatactctactta-cactttattacttg 24343662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 25550504 - 25550581
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||  ||  ||||| ||||||| || |||||||||||||||||||| ||||||||||||| ||||||||    
T  25550504 aaaataagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttg 25550581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 36175326 - 36175247
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatatcttttattt 135  Q
    |||||| ||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||| ||||| |  ||||||||||    
T  36175326 ttttctacaaccaaaa-caggtaacttgctttgttgaaaacagataaaaattgcaatctctaaccctcaactcttttattt 36175247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 24662051 - 24662207
Alignment:
Q  23 gggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctg 122  Q
    |||||| || ||||||||||| ||||  ||  ||| |||||||  |||||| ||||||||||||||| |||| |  ||||||||| |||| || |||||     
T  24662051 gggggaatcgaagagtcttaaccgctacttactttactgcaac--aaaacaagtaacttgctctgtttcaaacaactaaaaattgaaatcgctaaccctt 24662148  T
Q  123 atatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaac 181  Q
    |  |||||||||||||| ||| ||  |||||||||||||| ||  ||||||| ||||||    
T  24662149 aactcttttattttatatcgttaaactaaaataagtaacgtgaattgtttaggcgaaac 24662207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 24260708 - 24260655
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  24260708 tttctgcaaccaaaat-aggtaacttgctctgttgcaaacagataaaaattgcaa 24260655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 24265342 - 24265446
Alignment:
Q  17 taaataggggga-ttcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||| |||||| |||| ||| ||||| ||  ||||||||||| ||| | |||||||||||| | ||||||| |||||||||||||||| |||    
T  24265342 taaatagggggaattcaaatagtcctaaccgctgcttacttttctgcaactaaata-aggtaacttgctttattgcaaacagataaaaattgcaatatct 24265440  T
Q  116 gaccct 121  Q
     |||||    
T  24265441 aaccct 24265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 24341973 - 24342077
Alignment:
Q  17 taaataggggga-ttcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||||| |||||| |||| ||| ||||| ||  ||||||||||| ||| | |||||||||||| | ||||||| |||||||||||||||| |||    
T  24341973 taaatagggggaattcaaatagtcctaaccgctgcttacttttctgcaactaaata-aggtaacttgctttattgcaaacagataaaaattgcaatatct 24342071  T
Q  116 gaccct 121  Q
     |||||    
T  24342072 aaccct 24342077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 17314987 - 17315070
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattg 107  Q
    ||||||||||||| |||||| ||||| ||  |||| ||||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  17314987 ggggattcaaagaatcttaaccgctgcttacttttttgcaacc-aaaacaggtaacttcgctctattgcaaaaagataaaaattg 17315070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 20563997 - 20564053
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||||||||| |||| || ||||||||||||| |||||||||||||||    
T  20563997 ttttctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgcaa 20564053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 16523677 - 16523764
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||||| || ||| ||||| ||  ||||||  ||| |||||||||||| || ||||||||||||| |||||||||||||||    
T  16523677 ggggattcaaagaatcctaaccgctgcttacttttctataacaaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 16523764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 15691008 - 15690803
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aatctc 114  Q
    |||||||||||||||| |||| || ||| | ||| ||  |||||||||||||||| ||||||| |||||||||| | || | ||||||||||| ||||||    
T  15691008 ataaatagggggattcgaagaatcctaa-cactgcttacttttctgcaaccaaaa-caggtaatttgctctgttacgaacaaataaaaattgcaaatctc 15690911  T
Q  115 tgaccc-tgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttat 213  Q
    | |||| | |  ||||||||||  |   ||||| | ||||||||||||| ||  || || |||||||||| ||| |  ||||||| ||||| ||||||||    
T  15690910 taaccctttaactcttttatttatt--tgtcaactaaaaataagtaacgagaattggttggacgaaacgacaattctcgtggatacgatactctacttat 15690813  T
Q  214 cacttcatta 223  Q
    ||||| ||||    
T  15690812 cactttatta 15690803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 26121229 - 26121287
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatct 113  Q
    ||||||| ||||||||| || ||||||||||| ||||||| ||||||||||| ||||||    
T  26121229 ttttctgtaaccaaaaatagataacttgctctcttgcaaacagataaaaattacaatct 26121287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 20315430 - 20315507
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||| ||||||  ||||| ||||||| || ||||| |||||||| ||||| ||||||||||| | ||||||||    
T  20315430 aaaataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattacttg 20315507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 24140541 - 24140464
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    |||||| |||||||||  ||||| ||||||| || |||||| |||||||  |||| ||||||||||||| ||||||||    
T  24140541 aaaatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttg 24140464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 24852173 - 24852254
Alignment:
Q  151 aaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataat 232  Q
    |||||||||||| ||  |||||||||||||| | ||||| |||||||| |||||  ||||||||| || |||||||| ||||    
T  24852173 aaataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaat 24852254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 28664986 - 28664902
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgc 108  Q
    |||||||| |||| |||||| || || ||  |||||||||||||||| ||||||| || ||||||||||||| |||||||||||||    
T  28664986 ggggattcgaagaatcttaaccgttgcttatttttctgcaaccaaaa-caggtaaattcgctctgttgcaaacagataaaaattgc 28664902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 15375861 - 15375947
Alignment:
Q  132 attttataccgtcaattt---aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatca 215  Q
    ||||||||||||||| ||   ||||||||||| || |  | ||| |||||||||| |||||||||||||| ||||| ||||||||||    
T  15375861 attttataccgtcaacttgcaaaaataagtaatgcaaattttttggacgaaacgacaatccctgtggataggatactctacttatca 15375947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 15375800 - 15375859
Alignment:
Q  55 ttttctgcaaccaaaaacaggt-aacttgctctgttgcaaatagataaaaattgcaatct 113  Q
    |||| |||||||||||| |||  |||||||||||||||||| | ||||||||||||||||    
T  15375800 ttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaatct 15375859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 20744532 - 20744630
Alignment:
Q  13 aatataaatagg-gggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||| ||| ||||||| |||| || ||| ||||| ||  |||||| ||||||||| ||||||| |||||| ||||||||| |||||||||||||||    
T  20744532 aatataaacaggtgggattcgaagaatcctaaccgctgcttacttttctacaaccaaaa-caggtaaacttgctatgttgcaaacagataaaaattgcaa 20744630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 19004226 - 19004303
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| ||  ||||| ||| ||| || ||||| |||||||| ||||| | ||||||||||| ||||||||    
T  19004226 aaaataagtaacgtgaattgtttggacaaaatgacaatccatgtggatacgatactccacttatcactttattacttg 19004303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 23388862 - 23388915
Alignment:
Q  174 gacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||| || ||||| |||||||| ||||| ||||||||||||| ||||||||    
T  23388862 gacgaaaggacaatccatgtggatacgatactctacttatcactttattacttg 23388915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 35857 - 36071
Alignment:
Q  13 aatataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgc-aat 111  Q
    ||||||||||||||||||| |||| || ||| ||||| ||  |||||||||||||||| |||||||||| || |||| |||||||||||||||||| |||    
T  35857 aatataaatagggggattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggtaactttctttgttccaaatagataaaaattgcaaat 35956  T
Q  112 ctctgaccctgatatcttttattttataccgtc-aatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactact 210  Q
    |||| |||||  || || |||| || || |||| || |||||||||||||| |||  | ||| || ||||||| ||| | |||||||| ||||| |||||    
T  35957 ctctaaccct-ttaactcttatattttatcgtcaaacttaaaataagtaacacgaattatttggatgaaacgacaattcatgtggatacgatactctact 36055  T
Q  211 tatcacttcattactt 226  Q
    |||||||| |||||||    
T  36056 tatcactttattactt 36071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 151 - 267
Alignment:
Q  27 gattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatat 126  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||| | ||| ||| | ||||||||| |||||||||||||||||||| ||| | || |    
T  151 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaaccgataatttggtttgttgcaaacagataaaaattgcaatctctaaccattattt 250  T
Q  127 cttttattttataccgt 143  Q
    |||||||||||||||||    
T  251 cttttattttataccgt 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 5641 - 5729
Alignment:
Q  27 gattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctct 115  Q
    |||||||||| || ||| || |||||| |||||| ||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  5641 gattcaaagaatcctaaccgttgtttccttttctacaaccaaaaacaggtaatttggtctattgcaaacagataaaaattgcaatctct 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 114710 - 114598
Alignment:
Q  27 gattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgaccctgatat 126  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||| ||| |  | |    
T  114710 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaacaggtaatttggtctgttgcaaacagataaaaattacaatctctaaccattgtct 114611  T
Q  127 cttttattttata 139  Q
    |||||||||||||    
T  114610 cttttattttata 114598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 2684 - 2881
Alignment:
Q  16 ataaataggg-ggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc 114  Q
    |||||||||| |||||| ||||||||||| || |||||  |||||| ||||  ||| || |||||||||| ||||||||||| |||||||||||||||||    
T  2684 ataaatagggaggattcgaagagtcttaaccgttgtttacttttctacaac--aaaccatgtaacttgctatgttgcaaataaataaaaattgcaatctc 2781  T
Q  115 tgaccctgatatcttttatt-ttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttat 213  Q
    | ||||| |  ||||||||| |||||  |||||   |||||||||||| |||  ||||| |||||||||| ||| | |||||||| ||||| | ||||||    
T  2782 taacccttaactcttttattattatattgtcaaaacaaaataagtaacacgaattgtttggacgaaacgacaattcatgtggatacgatactcaacttat 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 56 - 231
Target Start/End: Complemental strand, 35730 - 35555
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa-tctctgaccctgata-tcttttattttataccgtcaat-ttaaa 152  Q
    ||||||||||||||| ||||||||||||| ||||||| | | ||||||||||||| ||||| |||||   | |||||||||||||  | ||||  |||||    
T  35730 tttctgcaaccaaaa-caggtaacttgctttgttgcagacaaataaaaattgcaaatctctaaccctttaactcttttattttat--catcaaacttaaa 35634  T
Q  153 ataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttgataa 231  Q
    |||||||| ||||  ||||| |||||||||||||||| ||||||||  |||| ||| ||||||||| ||||||||||||    
T  35633 ataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttattacttgataa 35555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 15840 - 15785
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15840 ttttccgcaaccaaaaacaggtaacttgctctgttgcaaattgataaaaattgcaa 15785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 89720 - 89930
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa-tctc 114  Q
    |||||| ||| |||| |||||||| ||| ||||| ||  |||||||||||||||| ||||||||||| || |||||||| ||||| |||||  || ||||    
T  89720 ataaatggggtgatttaaagagtcctaaccgctgcttatttttctgcaaccaaaa-caggtaacttgttcggttgcaaacagatagaaattaaaaatctc 89818  T
Q  115 tgaccctgatatcttttatttta---taccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactactt 211  Q
    | ||||| |  ||||||  || |   ||| ||   |||||||||||||||||||| |||||||||||||||| ||| | ||| |||||||||| ||||||    
T  89819 taacccttaactctttttattcactttactgt---tttaaaataagtaacgcgagttgtttagacgaaacgacaatacttgtagatatgatactctactt 89915  T
Q  212 atcacttcattacttg 227  Q
    | ||||| ||||||||    
T  89916 a-cactttattacttg 89930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 727 - 786
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaatct 113  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  727 ttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaatct 786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 823 - 900
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| |   ||||| |||||||||| |||| |  |||||| ||||| ||||||||||||| ||||||||    
T  823 aaaataagtaacgtggattgtttggacgaaacgacaatctcaatggatacgatactctacttatcactttattacttg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 2596 - 2396
Alignment:
Q  20 atagggggattcaaagagtcttaatcgctgttt-cgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgac 118  Q
    |||||||||||  ||||||| ||| |||||||| | |||||| |||| |||  |||||||||| |||||||||||| ||||  ||||| |||||||| ||    
T  2596 atagggggatttgaagagtcctaaccgctgtttactttttctacaacgaaa--caggtaactttctctgttgcaaacagat--aaattacaatctctaac 2501  T
Q  119 cctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    |||    |||||||||||| |  ||||| | ||||||| |||||| |  ||||| || |||| |  ||||| |||||||| ||||| ||||||||| |||    
T  2500 ccttcactcttttattttaaattgtcaaatcaaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctacttatccctt 2401  T
Q  219 catta 223  Q
     ||||    
T  2400 tatta 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 2627 - 2427
Alignment:
Q  20 atagggggattcaaagagtcttaatcgctgttt-cgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctctgac 118  Q
    |||||||||||  ||||||| ||| |||||||| | |||||| |||| |||  |||||||||| |||||||||||| ||||  ||||| |||||||| ||    
T  2627 atagggggatttgaagagtcctaaccgctgtttactttttctacaacgaaa--caggtaactttctctgttgcaaacagat--aaattacaatctctaac 2532  T
Q  119 cctgatatcttttattttataccgtcaatttaaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcactt 218  Q
    |||    |||||||||||| |  ||||| | ||||||| |||||| |  ||||| || |||| |  ||||| |||||||| ||||| ||||||||| |||    
T  2531 ccttcactcttttattttaaattgtcaaatcaaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctacttatccctt 2432  T
Q  219 catta 223  Q
     ||||    
T  2431 tatta 2427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 21351 - 21299
Alignment:
Q  174 gacgaaacgaaaatccctgtggatatgatacactacttatcacttcattactt 226  Q
    ||||||| || |||||||||||||||||||| ||||||||||||| |||||||    
T  21351 gacgaaaggacaatccctgtggatatgatactctacttatcactttattactt 21299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 25168 - 25113
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  25168 ttttctgcaaccaaaa-caggtaaacttgctctgttgcaaatagagaaaaattgcaa 25113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 655 - 569
Alignment:
Q  24 ggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||| |||| || ||| ||||| ||  |||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||    
T  655 ggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa-caggtaaattcgctctgttgcaaacagataaaaattgcaa 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 3377 - 3283
Alignment:
Q  16 ataaatagggggattcaaagagtcttaatcgctgtttcgttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||| |||||||||||| | || ||| ||||| ||  ||||||  |||||||||||||||| ||||||| || |||| | |||||||||||||    
T  3377 ataaatggggggattcaaaaaatcataaccgctgcttacttttctataaccaaaaacaggtaaattgctctattacaaacaaataaaaattgcaa 3283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 72204 - 72148
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    ||||||||||| ||||| | |||| |||||||||||||||| |||||||||||||||    
T  72204 ttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagataaaaattgcaa 72148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 70106 - 70050
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||| ||||||||||||||||| |||||||| ||||||| | |||||||||||||    
T  70106 ttttctacaaccaaaaacaggtaaacttgctctattgcaaacaaataaaaattgcaa 70050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 70012 - 69935
Alignment:
Q  150 aaaataagtaacgcgagctgtttagacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||||||||| ||  ||||| |||||||||| ||||| |||| ||| |||||  ||||| |||||| ||||||||    
T  70012 aaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttg 69935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 302 - 349
Alignment:
Q  63 aaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||||||||| ||||||||| ||||||  |||||||||||||||    
T  302 aaccaaaaacaggttacttgctctattgcaagcagataaaaattgcaa 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 181612 - 181666
Alignment:
Q  56 tttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 110  Q
    |||||||| | ||||||||| |||||||||||||||||| | ||||| |||||||    
T  181612 tttctgcaccaaaaaacaggcaacttgctctgttgcaaacaaataaatattgcaa 181666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 3606 - 3553
Alignment:
Q  174 gacgaaacgaaaatccctgtggatatgatacactacttatcacttcattacttg 227  Q
    ||||||| || ||||| |||||||| ||||| ||||||||||||| ||||||||    
T  3606 gacgaaaggacaatccatgtggatacgatactctacttatcactttattacttg 3553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 6010 - 6066
Alignment:
Q  55 ttttctgcaaccaaaaacaggtaactt-gctctgttgcaaatagataaaaattgcaa 110  Q
    |||||| |||||||||||| |||| || ||||| ||||||| |||||||||||||||    
T  6010 ttttctacaaccaaaaacaagtaaattcgctctattgcaaacagataaaaattgcaa 6066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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