View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3879_low_16 (Length: 464)

Name: NF3879_low_16
Description: NF3879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3879_low_16
NF3879_low_16
[»] chr2 (46 HSPs)
chr2 (1-325)||(4579776-4580076)
chr2 (216-314)||(18298080-18298176)
chr2 (215-314)||(20709773-20709870)
chr2 (216-304)||(25192892-25192978)
chr2 (111-176)||(16126671-16126736)
chr2 (217-315)||(14551287-14551382)
chr2 (111-176)||(19228426-19228491)
chr2 (111-176)||(22705455-22705520)
chr2 (111-176)||(27665156-27665221)
chr2 (111-176)||(39904160-39904225)
chr2 (111-177)||(15411734-15411800)
chr2 (111-176)||(12016667-12016732)
chr2 (111-167)||(26229974-26230030)
chr2 (109-177)||(36731179-36731246)
chr2 (111-176)||(10690783-10690848)
chr2 (111-176)||(14377425-14377490)
chr2 (111-176)||(16919266-16919331)
chr2 (111-175)||(5583671-5583735)
chr2 (111-177)||(23932565-23932631)
chr2 (111-177)||(9747317-9747383)
chr2 (123-176)||(16123291-16123344)
chr2 (107-144)||(36909520-36909557)
chr2 (111-176)||(43388879-43388944)
chr2 (242-305)||(4281766-4281827)
chr2 (242-305)||(25995313-25995374)
chr2 (112-167)||(12919473-12919528)
chr2 (117-167)||(13351333-13351383)
chr2 (222-252)||(19246663-19246693)
chr2 (223-252)||(1292073-1292102)
chr2 (223-252)||(7487148-7487177)
chr2 (109-154)||(7757920-7757965)
chr2 (223-252)||(12449056-12449085)
chr2 (223-252)||(20661398-20661427)
chr2 (223-252)||(24183610-24183639)
chr2 (108-177)||(27865927-27865995)
chr2 (223-252)||(31783795-31783824)
chr2 (223-252)||(31783998-31784027)
chr2 (223-252)||(34726606-34726635)
chr2 (111-144)||(35729116-35729149)
chr2 (223-252)||(39355178-39355207)
chr2 (223-252)||(41345089-41345118)
chr2 (112-177)||(45302340-45302405)
chr2 (226-258)||(8149968-8150000)
chr2 (226-258)||(8154592-8154624)
chr2 (114-154)||(20566152-20566192)
chr2 (223-251)||(25575325-25575353)
[»] chr8 (68 HSPs)
chr8 (215-323)||(1208708-1208814)
chr8 (214-314)||(32987414-32987512)
chr8 (216-291)||(39021975-39022050)
chr8 (216-305)||(7058114-7058201)
chr8 (108-176)||(35678387-35678455)
chr8 (220-305)||(4836679-4836762)
chr8 (220-305)||(4842124-4842207)
chr8 (111-176)||(10129104-10129169)
chr8 (111-176)||(4080506-4080571)
chr8 (111-176)||(4084655-4084720)
chr8 (111-176)||(4102962-4103027)
chr8 (111-176)||(7140571-7140636)
chr8 (111-176)||(13328053-13328118)
chr8 (111-176)||(14816238-14816303)
chr8 (111-176)||(14829437-14829502)
chr8 (111-176)||(38527821-38527886)
chr8 (216-281)||(42433701-42433766)
chr8 (111-175)||(3306168-3306232)
chr8 (112-176)||(39701915-39701979)
chr8 (216-283)||(40012180-40012247)
chr8 (216-292)||(15260840-15260917)
chr8 (111-176)||(19343949-19344014)
chr8 (106-167)||(26682063-26682124)
chr8 (111-176)||(40210933-40210998)
chr8 (111-175)||(2161388-2161452)
chr8 (111-179)||(31812113-31812181)
chr8 (241-314)||(7614093-7614164)
chr8 (111-177)||(12131983-12132049)
chr8 (111-177)||(33514612-33514678)
chr8 (242-314)||(8550530-8550600)
chr8 (111-176)||(9743862-9743927)
chr8 (112-168)||(39703455-39703511)
chr8 (242-308)||(15181817-15181881)
chr8 (111-177)||(8284681-8284747)
chr8 (111-176)||(7750668-7750733)
chr8 (108-144)||(5298066-5298102)
chr8 (108-144)||(11977285-11977321)
chr8 (223-258)||(185883-185918)
chr8 (109-176)||(1203600-1203667)
chr8 (111-154)||(11117132-11117175)
chr8 (111-154)||(13496867-13496910)
chr8 (223-258)||(17656620-17656655)
chr8 (223-258)||(23397450-23397485)
chr8 (223-258)||(23567488-23567523)
chr8 (116-159)||(26364119-26364162)
chr8 (106-177)||(26834556-26834627)
chr8 (111-177)||(6818017-6818083)
chr8 (111-176)||(8140567-8140633)
chr8 (216-281)||(15227030-15227096)
chr8 (222-252)||(18161289-18161319)
chr8 (111-188)||(20514632-20514710)
chr8 (222-252)||(27506707-27506737)
chr8 (111-177)||(34249677-34249743)
chr8 (223-253)||(40022390-40022420)
chr8 (223-252)||(1149917-1149946)
chr8 (223-252)||(1672944-1672973)
chr8 (223-252)||(4835520-4835549)
chr8 (223-252)||(10237497-10237526)
chr8 (223-252)||(15227173-15227202)
chr8 (223-252)||(15809853-15809882)
chr8 (223-252)||(17792905-17792934)
chr8 (223-252)||(24473257-24473286)
chr8 (223-252)||(34633215-34633244)
chr8 (223-252)||(34647173-34647202)
chr8 (223-252)||(35301631-35301660)
chr8 (223-252)||(35448623-35448652)
chr8 (223-252)||(39657710-39657739)
chr8 (224-252)||(1209799-1209827)
[»] chr1 (66 HSPs)
chr1 (216-314)||(18056784-18056880)
chr1 (216-314)||(22348039-22348135)
chr1 (111-176)||(313750-313815)
chr1 (111-176)||(39150439-39150504)
chr1 (111-176)||(51382372-51382437)
chr1 (216-314)||(45889596-45889692)
chr1 (216-305)||(16115851-16115938)
chr1 (111-177)||(39627683-39627749)
chr1 (111-176)||(17919454-17919519)
chr1 (216-305)||(23320063-23320158)
chr1 (111-192)||(38539087-38539168)
chr1 (111-192)||(38561305-38561386)
chr1 (111-176)||(44918025-44918090)
chr1 (112-176)||(32716275-32716339)
chr1 (111-176)||(1502832-1502897)
chr1 (112-176)||(8062206-8062270)
chr1 (113-175)||(6754474-6754536)
chr1 (111-177)||(30171879-30171945)
chr1 (111-177)||(30187420-30187486)
chr1 (111-177)||(34801968-34802034)
chr1 (108-179)||(7520107-7520178)
chr1 (242-304)||(37639368-37639428)
chr1 (109-175)||(3121117-3121183)
chr1 (113-175)||(41624832-41624894)
chr1 (111-176)||(23591698-23591763)
chr1 (216-281)||(23921898-23921963)
chr1 (109-178)||(36578330-36578399)
chr1 (111-167)||(399544-399600)
chr1 (111-175)||(23576527-23576591)
chr1 (242-305)||(35198159-35198220)
chr1 (255-305)||(179647-179695)
chr1 (223-258)||(1395358-1395393)
chr1 (111-154)||(6520712-6520755)
chr1 (223-262)||(19897654-19897693)
chr1 (223-258)||(29945423-29945458)
chr1 (260-314)||(30802440-30802492)
chr1 (223-258)||(32143776-32143811)
chr1 (214-305)||(8402289-8402371)
chr1 (223-252)||(6314259-6314288)
chr1 (223-252)||(9041064-9041093)
chr1 (223-252)||(9628612-9628641)
chr1 (223-252)||(10974635-10974664)
chr1 (223-252)||(14229174-14229203)
chr1 (223-252)||(16976098-16976127)
chr1 (223-252)||(17811296-17811325)
chr1 (223-252)||(17893074-17893103)
chr1 (223-252)||(17893286-17893315)
chr1 (223-252)||(23817453-23817482)
chr1 (223-252)||(24636069-24636098)
chr1 (223-252)||(31763986-31764015)
chr1 (223-252)||(32595296-32595325)
chr1 (223-252)||(33156994-33157023)
chr1 (111-144)||(34050428-34050461)
chr1 (223-252)||(42134146-42134175)
chr1 (109-162)||(43317488-43317541)
chr1 (223-252)||(43452685-43452714)
chr1 (223-252)||(48762225-48762254)
chr1 (223-252)||(49936831-49936860)
chr1 (223-252)||(49992520-49992549)
chr1 (215-278)||(4097911-4097975)
chr1 (223-251)||(11422584-11422612)
chr1 (223-251)||(23920973-23921001)
chr1 (216-252)||(41033262-41033298)
chr1 (223-251)||(42133946-42133974)
chr1 (224-252)||(45849111-45849139)
chr1 (214-281)||(49936937-49937005)
[»] chr7 (63 HSPs)
chr7 (214-314)||(30428871-30428969)
chr7 (214-313)||(15974906-15975003)
chr7 (108-176)||(39757222-39757290)
chr7 (216-322)||(48690895-48690999)
chr7 (214-305)||(46024025-46024114)
chr7 (111-176)||(9331962-9332027)
chr7 (111-176)||(19889341-19889406)
chr7 (111-176)||(24250314-24250379)
chr7 (111-176)||(47120306-47120371)
chr7 (109-177)||(19868112-19868180)
chr7 (112-176)||(36548572-36548636)
chr7 (106-176)||(23982868-23982938)
chr7 (216-289)||(12279745-12279818)
chr7 (111-192)||(32117815-32117896)
chr7 (215-292)||(48305236-48305312)
chr7 (112-176)||(3561990-3562054)
chr7 (216-323)||(28396722-28396827)
chr7 (111-176)||(5909394-5909459)
chr7 (111-176)||(12086043-12086108)
chr7 (111-176)||(24463067-24463132)
chr7 (216-281)||(25778837-25778902)
chr7 (111-176)||(39869123-39869188)
chr7 (111-175)||(33342989-33343053)
chr7 (113-175)||(7170005-7170067)
chr7 (242-305)||(5757413-5757474)
chr7 (216-292)||(12279641-12279717)
chr7 (111-175)||(46290011-46290075)
chr7 (111-154)||(34270266-34270309)
chr7 (112-167)||(47457583-47457638)
chr7 (111-177)||(44806934-44807000)
chr7 (262-323)||(48691038-48691097)
chr7 (111-188)||(12624638-12624714)
chr7 (216-314)||(46573469-46573563)
chr7 (223-258)||(763834-763869)
chr7 (223-258)||(6620621-6620656)
chr7 (223-258)||(15973862-15973897)
chr7 (223-258)||(46572576-46572611)
chr7 (111-173)||(25709515-25709577)
chr7 (111-177)||(29398226-29398292)
chr7 (114-167)||(4161885-4161938)
chr7 (223-252)||(11732044-11732073)
chr7 (111-176)||(12650821-12650886)
chr7 (223-252)||(16933137-16933166)
chr7 (223-252)||(16938520-16938549)
chr7 (223-252)||(26945727-26945756)
chr7 (223-252)||(30884116-30884145)
chr7 (223-252)||(31660212-31660241)
chr7 (223-252)||(33798746-33798775)
chr7 (223-252)||(35737091-35737120)
chr7 (223-252)||(38837742-38837771)
chr7 (223-252)||(41911006-41911035)
chr7 (223-252)||(44426600-44426629)
chr7 (223-252)||(46004548-46004577)
chr7 (223-252)||(46358663-46358692)
chr7 (223-252)||(47340290-47340319)
chr7 (223-252)||(48692063-48692092)
chr7 (223-252)||(48830612-48830641)
chr7 (223-251)||(7845111-7845139)
chr7 (223-251)||(31365273-31365301)
chr7 (223-251)||(34227678-34227706)
chr7 (223-251)||(43742251-43742279)
chr7 (242-305)||(44141229-44141290)
chr7 (222-258)||(46004342-46004378)
[»] chr4 (86 HSPs)
chr4 (214-314)||(27764238-27764336)
chr4 (220-314)||(36621670-36621762)
chr4 (216-304)||(26447391-26447477)
chr4 (216-305)||(45255975-45256062)
chr4 (219-305)||(22181223-22181307)
chr4 (106-180)||(49332328-49332402)
chr4 (215-281)||(50643742-50643808)
chr4 (111-176)||(49228357-49228422)
chr4 (111-179)||(9326979-9327047)
chr4 (111-179)||(9373701-9373769)
chr4 (111-179)||(9382013-9382081)
chr4 (111-175)||(10658557-10658621)
chr4 (111-175)||(10872702-10872766)
chr4 (106-177)||(16667496-16667567)
chr4 (111-176)||(7349689-7349754)
chr4 (216-304)||(21097140-21097226)
chr4 (111-175)||(9759255-9759319)
chr4 (111-175)||(50352303-50352367)
chr4 (112-167)||(23553571-23553626)
chr4 (218-281)||(29826606-29826669)
chr4 (111-177)||(8736922-8736988)
chr4 (122-176)||(29190928-29190982)
chr4 (212-314)||(38485643-38485739)
chr4 (111-177)||(47327004-47327070)
chr4 (111-177)||(47341800-47341866)
chr4 (111-176)||(10389380-10389445)
chr4 (123-192)||(27756574-27756643)
chr4 (242-305)||(4168384-4168445)
chr4 (109-177)||(25843289-25843357)
chr4 (111-167)||(40049559-40049615)
chr4 (113-177)||(49181074-49181138)
chr4 (109-176)||(36000052-36000119)
chr4 (106-161)||(36968283-36968338)
chr4 (106-177)||(54495749-54495820)
chr4 (110-188)||(6875500-6875578)
chr4 (111-176)||(49650211-49650276)
chr4 (216-304)||(50563708-50563794)
chr4 (124-175)||(39876844-39876895)
chr4 (111-154)||(48910969-48911012)
chr4 (245-291)||(637883-637929)
chr4 (111-161)||(1377454-1377504)
chr4 (219-292)||(1729604-1729678)
chr4 (222-252)||(8157302-8157332)
chr4 (111-177)||(23545476-23545542)
chr4 (110-144)||(24243034-24243068)
chr4 (111-177)||(34941278-34941344)
chr4 (222-252)||(49492405-49492435)
chr4 (216-281)||(55765481-55765547)
chr4 (223-252)||(1492674-1492703)
chr4 (223-252)||(2124346-2124375)
chr4 (223-252)||(6841823-6841852)
chr4 (223-252)||(8165764-8165793)
chr4 (223-252)||(10473661-10473690)
chr4 (223-252)||(11786117-11786146)
chr4 (223-252)||(11798284-11798313)
chr4 (223-252)||(12722739-12722768)
chr4 (223-252)||(13635619-13635648)
chr4 (223-252)||(15051030-15051059)
chr4 (223-252)||(17109931-17109960)
chr4 (223-252)||(21995672-21995701)
chr4 (223-252)||(22180208-22180237)
chr4 (223-252)||(25715645-25715674)
chr4 (223-252)||(26577263-26577292)
chr4 (223-252)||(30358850-30358879)
chr4 (223-252)||(30597842-30597871)
chr4 (223-252)||(30779345-30779374)
chr4 (223-252)||(31763121-31763150)
chr4 (223-252)||(33819693-33819722)
chr4 (223-252)||(33883296-33883325)
chr4 (139-176)||(35911143-35911180)
chr4 (223-252)||(36924243-36924272)
chr4 (223-252)||(37059713-37059742)
chr4 (112-177)||(39539465-39539530)
chr4 (223-252)||(45256908-45256937)
chr4 (223-252)||(49425951-49425980)
chr4 (223-252)||(50644683-50644712)
chr4 (223-252)||(53441463-53441492)
chr4 (223-252)||(53865256-53865285)
chr4 (223-252)||(54895596-54895625)
chr4 (224-252)||(639007-639035)
chr4 (111-179)||(3085352-3085420)
chr4 (111-143)||(9971710-9971742)
chr4 (214-281)||(30597697-30597765)
chr4 (223-251)||(31762931-31762959)
chr4 (224-252)||(36309419-36309447)
chr4 (216-252)||(48077874-48077910)
[»] scaffold0097 (1 HSPs)
scaffold0097 (215-314)||(13612-13709)
[»] scaffold0238 (1 HSPs)
scaffold0238 (214-308)||(25207-25299)
[»] chr5 (57 HSPs)
chr5 (218-304)||(25017196-25017280)
chr5 (216-305)||(28070131-28070218)
chr5 (111-176)||(5958236-5958301)
chr5 (218-314)||(13362772-13362866)
chr5 (215-314)||(23335676-23335773)
chr5 (216-292)||(34329127-34329203)
chr5 (108-176)||(12642105-12642173)
chr5 (112-192)||(32020081-32020161)
chr5 (111-176)||(2795524-2795589)
chr5 (111-176)||(11636732-11636797)
chr5 (111-176)||(34578012-34578077)
chr5 (111-192)||(13516022-13516103)
chr5 (111-176)||(15190873-15190938)
chr5 (112-176)||(9184209-9184273)
chr5 (111-176)||(30328439-30328504)
chr5 (111-175)||(30839782-30839846)
chr5 (111-167)||(31366073-31366129)
chr5 (111-175)||(36597580-36597644)
chr5 (111-175)||(40512952-40513016)
chr5 (113-175)||(8103693-8103755)
chr5 (111-176)||(10665077-10665142)
chr5 (242-314)||(16668763-16668833)
chr5 (255-314)||(2827036-2827093)
chr5 (255-308)||(18465531-18465582)
chr5 (222-256)||(39086715-39086749)
chr5 (111-176)||(4047413-4047478)
chr5 (123-176)||(11375972-11376025)
chr5 (111-179)||(10658397-10658465)
chr5 (216-288)||(42512200-42512271)
chr5 (108-167)||(11360183-11360242)
chr5 (211-281)||(13552978-13553049)
chr5 (111-154)||(15241227-15241270)
chr5 (223-258)||(15559051-15559086)
chr5 (223-258)||(20134406-20134441)
chr5 (223-258)||(37456817-37456852)
chr5 (222-252)||(22830801-22830831)
chr5 (109-167)||(33072675-33072733)
chr5 (222-251)||(703731-703760)
chr5 (223-252)||(3340592-3340621)
chr5 (223-256)||(3340788-3340821)
chr5 (223-252)||(3883929-3883958)
chr5 (223-252)||(11660795-11660824)
chr5 (223-252)||(11660995-11661024)
chr5 (223-252)||(13553126-13553155)
chr5 (223-252)||(14394611-14394640)
chr5 (111-144)||(14466634-14466667)
chr5 (223-252)||(14940250-14940279)
chr5 (223-252)||(22695553-22695582)
chr5 (223-252)||(23155527-23155556)
chr5 (223-252)||(25545585-25545614)
chr5 (223-252)||(26637731-26637760)
chr5 (223-252)||(35662069-35662098)
chr5 (223-252)||(39861793-39861822)
chr5 (109-168)||(8716082-8716139)
chr5 (111-159)||(11250086-11250134)
chr5 (223-251)||(20134201-20134229)
chr5 (223-251)||(22672011-22672039)
[»] chr3 (65 HSPs)
chr3 (216-314)||(51362407-51362503)
chr3 (216-304)||(19385294-19385380)
chr3 (218-314)||(50754008-50754102)
chr3 (216-314)||(7045269-7045365)
chr3 (216-291)||(8718101-8718176)
chr3 (216-291)||(9069988-9070063)
chr3 (220-314)||(16277383-16277475)
chr3 (229-314)||(52987619-52987702)
chr3 (111-176)||(3863330-3863395)
chr3 (111-176)||(11610915-11610980)
chr3 (112-176)||(51339296-51339360)
chr3 (111-176)||(32553367-32553432)
chr3 (113-175)||(37444149-37444211)
chr3 (111-176)||(13495294-13495359)
chr3 (111-176)||(20938057-20938122)
chr3 (111-175)||(2571269-2571333)
chr3 (112-176)||(54621330-54621394)
chr3 (111-177)||(38389447-38389513)
chr3 (109-159)||(48240218-48240268)
chr3 (111-176)||(30214123-30214187)
chr3 (111-175)||(10307767-10307831)
chr3 (111-159)||(12515603-12515651)
chr3 (108-176)||(43750049-43750117)
chr3 (111-177)||(47386922-47386988)
chr3 (111-176)||(46845553-46845618)
chr3 (111-176)||(50364191-50364256)
chr3 (215-281)||(9106266-9106333)
chr3 (223-258)||(26662432-26662467)
chr3 (111-162)||(39365258-39365309)
chr3 (255-304)||(17627210-17627257)
chr3 (222-252)||(27446226-27446256)
chr3 (127-177)||(35094972-35095022)
chr3 (111-177)||(37055478-37055544)
chr3 (216-314)||(39099189-39099293)
chr3 (222-252)||(47924379-47924409)
chr3 (222-252)||(50755205-50755235)
chr3 (223-252)||(3475301-3475330)
chr3 (223-252)||(6097578-6097607)
chr3 (223-252)||(8036802-8036831)
chr3 (223-252)||(8719150-8719179)
chr3 (223-252)||(9071037-9071066)
chr3 (223-252)||(9106410-9106439)
chr3 (223-252)||(9595874-9595903)
chr3 (223-252)||(10986495-10986524)
chr3 (223-252)||(12974014-12974043)
chr3 (223-252)||(12974203-12974232)
chr3 (223-252)||(17620738-17620767)
chr3 (223-252)||(19284814-19284843)
chr3 (111-188)||(23638150-23638227)
chr3 (223-252)||(27068534-27068563)
chr3 (223-252)||(30947805-30947834)
chr3 (223-252)||(34562401-34562430)
chr3 (223-252)||(36185918-36185947)
chr3 (223-252)||(50416482-50416511)
chr3 (223-252)||(50416577-50416606)
chr3 (223-252)||(51361525-51361554)
chr3 (111-144)||(51618050-51618083)
chr3 (223-252)||(54379305-54379334)
chr3 (224-252)||(2941821-2941849)
chr3 (109-177)||(15863017-15863085)
chr3 (112-144)||(26291197-26291229)
chr3 (111-180)||(28992886-28992957)
chr3 (223-251)||(36185728-36185756)
chr3 (113-177)||(46492455-46492519)
chr3 (111-167)||(50204403-50204459)
[»] chr6 (44 HSPs)
chr6 (216-304)||(33346350-33346436)
chr6 (216-304)||(29157226-29157312)
chr6 (216-314)||(34399641-34399737)
chr6 (111-176)||(5363005-5363070)
chr6 (111-176)||(26602543-26602608)
chr6 (109-176)||(12454064-12454131)
chr6 (216-291)||(15034965-15035040)
chr6 (111-177)||(31791027-31791094)
chr6 (111-177)||(8977578-8977644)
chr6 (216-291)||(35119239-35119310)
chr6 (112-176)||(2830793-2830857)
chr6 (219-274)||(12394387-12394442)
chr6 (111-177)||(18332800-18332866)
chr6 (245-314)||(18611218-18611285)
chr6 (111-177)||(29863414-29863480)
chr6 (106-159)||(17552716-17552769)
chr6 (113-177)||(10887031-10887095)
chr6 (111-175)||(14228239-14228303)
chr6 (111-175)||(28943882-28943946)
chr6 (111-154)||(33017725-33017768)
chr6 (111-177)||(6016856-6016922)
chr6 (113-167)||(17596315-17596369)
chr6 (126-175)||(2086949-2086998)
chr6 (216-249)||(2759826-2759859)
chr6 (246-314)||(24737660-24737726)
chr6 (114-154)||(10345674-10345714)
chr6 (111-154)||(1814916-1814959)
chr6 (130-176)||(22974685-22974731)
chr6 (130-176)||(23813670-23813716)
chr6 (111-177)||(30623326-30623392)
chr6 (223-252)||(6900946-6900975)
chr6 (223-252)||(7765417-7765446)
chr6 (223-252)||(10588966-10588995)
chr6 (223-252)||(14237780-14237809)
chr6 (223-252)||(15493317-15493346)
chr6 (223-252)||(18755665-18755694)
chr6 (223-252)||(19284373-19284402)
chr6 (223-252)||(20522861-20522890)
chr6 (223-252)||(21385002-21385031)
chr6 (223-252)||(22857490-22857519)
chr6 (223-252)||(34869957-34869986)
chr6 (111-143)||(2086999-2087031)
chr6 (223-251)||(25119484-25119512)
chr6 (112-176)||(31169876-31169940)
[»] scaffold0544 (1 HSPs)
scaffold0544 (217-288)||(10668-10739)
[»] scaffold0061 (1 HSPs)
scaffold0061 (111-176)||(52891-52956)
[»] scaffold0017 (1 HSPs)
scaffold0017 (111-176)||(145678-145743)
[»] scaffold0011 (1 HSPs)
scaffold0011 (111-176)||(13086-13151)
[»] scaffold0337 (1 HSPs)
scaffold0337 (219-305)||(7020-7104)
[»] scaffold0189 (1 HSPs)
scaffold0189 (216-278)||(11193-11255)
[»] scaffold0194 (1 HSPs)
scaffold0194 (216-304)||(27607-27693)
[»] scaffold0727 (1 HSPs)
scaffold0727 (112-167)||(5692-5747)
[»] scaffold0111 (1 HSPs)
scaffold0111 (111-177)||(37226-37292)
[»] scaffold0338 (1 HSPs)
scaffold0338 (222-258)||(6520-6556)
[»] scaffold0053 (1 HSPs)
scaffold0053 (108-144)||(27306-27342)
[»] scaffold0009 (3 HSPs)
scaffold0009 (109-145)||(193376-193412)
scaffold0009 (111-176)||(43462-43528)
scaffold0009 (224-252)||(51908-51936)
[»] scaffold0581 (1 HSPs)
scaffold0581 (216-281)||(8421-8487)
[»] scaffold0571 (1 HSPs)
scaffold0571 (223-252)||(547-576)
[»] scaffold0516 (1 HSPs)
scaffold0516 (223-252)||(1261-1290)
[»] scaffold0249 (2 HSPs)
scaffold0249 (223-252)||(23546-23575)
scaffold0249 (224-252)||(23748-23776)
[»] scaffold0129 (1 HSPs)
scaffold0129 (223-252)||(20133-20162)
[»] scaffold0102 (1 HSPs)
scaffold0102 (223-252)||(33618-33647)
[»] scaffold0074 (1 HSPs)
scaffold0074 (223-252)||(24417-24446)
[»] scaffold1450 (1 HSPs)
scaffold1450 (223-251)||(752-780)
[»] scaffold0036 (1 HSPs)
scaffold0036 (112-176)||(94131-94195)


Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 4580076 - 4579776
Alignment:
Q  1 tatttgatcaatctttaaaattcccaataaatatatagcttcacttttcctcattggctcaaggtgacctcacatccaaagttgaagaaagttcatatat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4580076 tatttgatcaatctttaaaattcccaataaatatatagcttcacttttcctcattggctcaaggtgacctcacatccaaagttgaagaaagttcatatat 4579977  T
Q  101 atactttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattattataatgaag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | | ||||||||||||||||||    
T  4579976 atactttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaaacaccaattattattataatgaag 4579877  T
Q  201 ctgggctgcactgttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaa 300  Q
    || ||||||||                      ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||    
T  4579876 ctcggctgcac----------------------taaggaaatccttatgcaccatgcataaacactttacaaccatcagatctagtgt--acacgtgtaa 4579801  T
Q  301 taatcttatgcttcatttctacact 325  Q
    |||||||||||||||||||||||||    
T  4579800 taatcttatgcttcatttctacact 4579776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 18298176 - 18298080
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  18298176 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 18298080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 20709773 - 20709870
Alignment:
Q  215 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||| |||  |||| |||||||| |||||||||||||||||||||||||  |||||||||| || |||||    
T  20709773 tggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacaca--tgtaataatcctacgcttc 20709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 25192892 - 25192978
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||| |||||||||||  ||||||||||||||    
T  25192892 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccattagatctagtgt--acacgtgtaataat 25192978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 16126736 - 16126671
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  16126736 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaa 16126671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 315
Target Start/End: Complemental strand, 14551382 - 14551287
Alignment:
Q  217 gcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttca 315  Q
    |||||||||||||||||||||||||| |||||||||  |||| |||||||| ||||||||||||||||||||  ||| ||||||||||| || ||||||    
T  14551382 gcaaaagttatggtgcataaggaaattcttatgcac-gtgcataaacacttcacaaccatcagatctagtgt--acatgtgtaataatcctaggcttca 14551287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 19228426 - 19228491
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  19228426 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 19228491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 22705455 - 22705520
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  22705455 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 22705520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 27665221 - 27665156
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  27665221 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaa 27665156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 39904225 - 39904160
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  39904225 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 39904160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 15411800 - 15411734
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||| |||||||||    
T  15411800 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaa 15411734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 12016667 - 12016732
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  12016667 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 12016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 26230030 - 26229974
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  26230030 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttt 26229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 36731179 - 36731246
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||| ||||||||||||||    
T  36731179 gagtttgtctaacatgtgcaa-attgcacttgttaagaaaactaaatgtagtaacttttcattgaaaaa 36731246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 10690783 - 10690848
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||  |||||||  ||||||||||||||| ||||    
T  10690783 gtttgtctaacatgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaa 10690848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 14377425 - 14377490
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||| |||||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  14377425 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaa 14377490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 16919331 - 16919266
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||  |||||||    
T  16919331 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 16919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 5583735 - 5583671
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| |||||||    
T  5583735 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 5583671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 23932565 - 23932631
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||||| |||||||||| | |||||||  |||||| ||| ||||||||||    
T  23932565 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaa 23932631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 9747317 - 9747383
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||| ||||||||||||   ||||||| ||||||| | || |||||||||    
T  9747317 gtttgtctaacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaa 9747383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 16123291 - 16123344
Alignment:
Q  123 tgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||| |||||||||||| ||||||| | ||||| |||||||||||||    
T  16123291 tgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaa 16123344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 36909557 - 36909520
Alignment:
Q  107 tagagtttgtctaacatgtgcaatattacacatgttaa 144  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  36909557 tagagtttgtctaacatatgcaatattacacatgttaa 36909520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 43388944 - 43388879
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||| |||||||||||| ||||| |||| | ||||||| |||| ||||||| ||||||||    
T  43388944 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaa 43388879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 4281827 - 4281766
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||| ||| || | |||||||| ||||||||||||||||||||  |||||||||||||||    
T  4281827 tccttatgtactctgtataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 4281766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 25995313 - 25995374
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||| |||| ||| |||| ||||||||||||| ||||||  |||||||||||||||    
T  25995313 tccttatgcactctgcataaatacttcacaaccatcagatttagtgt--acacgtgtaataatc 25995374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 12919528 - 12919473
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    |||||||||||||||||||||| |||||||||| | || |||| ||| ||||||||    
T  12919528 tttgtctaacatgtgcaatattgcacatgttaaagcaattaaaagtattaattttt 12919473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 13351383 - 13351333
Alignment:
Q  117 ctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| ||||||    
T  13351383 ctaatatgtgcaatattgcacatgttaaggtaactaaaagtagttattttt 13351333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Original strand, 19246663 - 19246693
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  19246663 agttatggtgcataaggaaatccttatgcac 19246693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 1292073 - 1292102
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  1292073 gttatggtgcataaggaaatccttatgcac 1292102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 7487148 - 7487177
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  7487148 gttatggtgcataaggaaatccttatgcac 7487177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 7757965 - 7757920
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||||||||||| |||  ||||||||||| |||||||    
T  7757965 gagtttgtctaacatgtgcaaaattgtacatgttaaggtaactaaa 7757920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 12449056 - 12449085
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  12449056 gttatggtgcataaggaaatccttatgcac 12449085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 20661398 - 20661427
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  20661398 gttatggtgcataaggaaatccttatgcac 20661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 24183639 - 24183610
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  24183639 gttatggtgcataaggaaatccttatgcac 24183610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 27865995 - 27865927
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||| ||||  || || ||||||| ||||||||| ||| |||||||| |||||||||    
T  27865995 agagtttgtctaacatgagcaacgttgcatatgttaaagaaactaaaagtaataattttt-attgaaaaa 27865927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 31783795 - 31783824
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  31783795 gttatggtgcataaggaaatccttatgcac 31783824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 31784027 - 31783998
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  31784027 gttatggtgcataaggaaatccttatgcac 31783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 34726606 - 34726635
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  34726606 gttatggtgcataaggaaatccttatgcac 34726635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 35729116 - 35729149
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaa 144  Q
    ||||||||||||||||||||||| ||||||||||    
T  35729116 gtttgtctaacatgtgcaatattgcacatgttaa 35729149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 39355207 - 39355178
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  39355207 gttatggtgcataaggaaatccttatgcac 39355178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 41345089 - 41345118
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  41345089 gttatggtgcataaggaaatccttatgcac 41345118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 45302340 - 45302405
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||||||||||||| ||||| |||||||||||| ||||| ||| ||| ||| |||| ||| |||||    
T  45302340 tttgtctaacatgtacaataatacacatgttaaagaaacaaaaagtaataagtttttattaaaaaa 45302405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 8150000 - 8149968
Alignment:
Q  226 atggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||| |||||    
T  8150000 atggtgcataaggaaatccttatgcaccatgca 8149968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 8154624 - 8154592
Alignment:
Q  226 atggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||| |||||    
T  8154624 atggtgcataaggaaatccttatgcaccatgca 8154592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 20566192 - 20566152
Alignment:
Q  114 tgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    |||||||||||||||||||| |||||||||| | |||||||    
T  20566192 tgtctaacatgtgcaatattgcacatgttaaagtaactaaa 20566152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 25575325 - 25575353
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  25575325 gttatggtgcataaggaaatccttatgca 25575353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 1208708 - 1208814
Alignment:
Q  215 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| |||||||||||  ||||||||||||||| || |||||    
T  1208708 tggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacactttacaaccataagatctagtgt--acacgtgtaataatcctaggcttc 1208805  T
Q  315 atttctaca 323  Q
    || ||||||    
T  1208806 atctctaca 1208814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 32987512 - 32987414
Alignment:
Q  214 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgctt 313  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || ||||    
T  32987512 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggctt 32987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 39021975 - 39022050
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 291  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||||||    
T  39021975 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaatcatcagatctagtgtaca 39022050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 305
Target Start/End: Original strand, 7058114 - 7058201
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    ||||||||||||||||||||||||||| |||||||||  |||| |||||||| ||||||||| ||||||||||  |||||||||||||||    
T  7058114 ggcaaaagttatggtgcataaggaaatacttatgcaccgtgcataaacacttcacaaccatccgatctagtgt--acacgtgtaataatc 7058201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 35678455 - 35678387
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||    
T  35678455 agagtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaa 35678387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 4836762 - 4836679
Alignment:
Q  220 aaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    ||||||||||||||||| ||||| |||||||||  |||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  4836762 aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 4836679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 4842207 - 4842124
Alignment:
Q  220 aaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    ||||||||||||||||| ||||| |||||||||  |||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  4842207 aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 4842124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 10129104 - 10129169
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  10129104 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaa 10129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 4080571 - 4080506
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||| |||||| ||||||||||||||| |||| ||||||| |||||||||||||    
T  4080571 gtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaa 4080506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 4084720 - 4084655
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||| |||||| ||||||||||||||| |||| ||||||| |||||||||||||    
T  4084720 gtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaa 4084655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 4103027 - 4102962
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||| |||||| ||||||||||||||| |||| ||||||| |||||||||||||    
T  4103027 gtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaa 4102962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 7140636 - 7140571
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  7140636 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 7140571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 13328118 - 13328053
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| ||||||| |||||||||||||    
T  13328118 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 13328053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 14816303 - 14816238
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||| ||||||||    
T  14816303 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaa 14816238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 14829437 - 14829502
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||| ||||||||    
T  14829437 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaa 14829502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 38527821 - 38527886
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||| ||| |||||||||||||    
T  38527821 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaa 38527886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 42433701 - 42433766
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    |||||||||||||||||||||||||||||||||||||  |||| || ||||| |||||||||||||    
T  42433701 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 42433766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 3306232 - 3306168
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||| |||||||    
T  3306232 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 3306168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 39701979 - 39701915
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||| |||||||    
T  39701979 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaa 39701915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 40012247 - 40012180
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatct 283  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| ||| |||||||||||||| |||||    
T  40012247 ggcaaaagttatggtgcataaggatttccttatgcaccatgcataaagactttacaaccatcggatct 40012180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 15260917 - 15260840
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagatctagtgtacac 292  Q
    ||||||||||||||||||||||||  | ||||||||||  |||| |||||||| |||||||||| |||||||||||||    
T  15260917 ggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacac 15260840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 19344014 - 19343949
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||| |||||||||||||| |||||||||||| ||| ||| ||||||| |||||||||||||    
T  19344014 gtttgtcttacatgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaa 19343949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 26682063 - 26682124
Alignment:
Q  106 ttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    |||||||||||||||||||||||||||| ||||||||||   ||||||| ||||||||||||    
T  26682063 ttagagtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaattttt 26682124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 40210998 - 40210933
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| ||| ||| |||||||||||||    
T  40210998 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaa 40210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 2161388 - 2161452
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| |||||||    
T  2161388 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 2161452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 31812113 - 31812181
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 179  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||||    
T  31812113 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaata 31812181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 7614093 - 7614164
Alignment:
Q  241 atccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||| ||||| |||||||| |||||||||||||||| |||  ||||||||||||||| || |||||    
T  7614093 atccttatgcaccatgcataaacacttcacaaccatcagatctaatgt--acacgtgtaataatcataggcttc 7614164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 12131983 - 12132049
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||| |||| || |||| |||||||||    
T  12131983 gtttgtctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaa 12132049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 33514678 - 33514612
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| |||| ||  ||| |||||||||    
T  33514678 gtttgcctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaaaa 33514612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 8550530 - 8550600
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  8550530 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcataagcttc 8550600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 9743862 - 9743927
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||||   |||||||||  ||||||| |||||||||||| ||||||||    
T  9743862 gtttgtctaacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaa 9743927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 39703455 - 39703511
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttc 168  Q
    |||||||||| ||||||||||| |||||||||||| ||||||| ||||||| |||||    
T  39703455 tttgtctaacgtgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttc 39703511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 15181817 - 15181881
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatctta 308  Q
    |||||||||||  |||| |||||||| |||| |||||||||||||||  ||||||||||||||||||    
T  15181817 tccttatgcaccctgcataaacacttcacaagcatcagatctagtgt--acacgtgtaataatctta 15181881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 8284747 - 8284681
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||||||||||||||||| |||| |||||||||| | ||||||| ||||||| |||| ||| |||||    
T  8284747 gtttgtctaacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaa 8284681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 7750668 - 7750733
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| ||||||||||   ||||||| |||| || |||| ||||||||    
T  7750668 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaa 7750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 5298066 - 5298102
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaa 144  Q
    |||||||||| ||||||||||||||||||||||||||    
T  5298066 agagtttgtcaaacatgtgcaatattacacatgttaa 5298102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 11977321 - 11977285
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaa 144  Q
    |||||||||||||||||||||| ||||||||||||||    
T  11977321 agagtttgtctaacatgtgcaacattacacatgttaa 11977285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 185883 - 185918
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  185883 gttatggtgcataaggaaatccttatgcactctgca 185918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 1203600 - 1203667
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||| ||||||||| ||||| |||||  |||||||   ||||| |||||||||||||    
T  1203600 gagtttgtctaacatatgcaatattgcacatattaagataactaaaaaaagtaacttttcattgaaaa 1203667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 11117175 - 11117132
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||||||||||||| |||||||||| | |||||||    
T  11117175 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaa 11117132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 13496910 - 13496867
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||||||||||||| |||||||||| | |||||||    
T  13496910 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaa 13496867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 17656620 - 17656655
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17656620 gttatggtgcataaggaaatccttatgcactctgca 17656655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 23397485 - 23397450
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    |||||||||||||||||||||||||||||| |||||    
T  23397485 gttatggtgcataaggaaatccttatgcaccatgca 23397450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 23567488 - 23567523
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23567488 gttatggtgcataaggaaatccttatgcactctgca 23567523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 26364162 - 26364119
Alignment:
Q  116 tctaacatgtgcaatattacacatgttaaggaaactaaatgtag 159  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||    
T  26364162 tctaacatgtgcaatattgcacatgttaaggtaactaaaagtag 26364119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 26834556 - 26834627
Alignment:
Q  106 ttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||| ||||||||||||| ||||| ||| |||||| ||||  | ||||| |||||||||||| |||||||||    
T  26834556 ttagggtttgtctaacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaa 26834627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 6818017 - 6818083
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||||||||||||||||||||||  | ||||||| | |||||||  |||||| ||| ||||||||||    
T  6818017 gtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaa 6818083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 8140567 - 8140633
Alignment:
Q  111 gtttgtctaacatgt-gcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||| | | ||||||  ||||||||||| ||||||| ||||| |||||||||||||||    
T  8140567 gtttgtctaacattttgtaatattttacatgttaaggcaactaaaagtagtgatttttcattgaaaa 8140633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 15227030 - 15227096
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    ||||||||||||||||||||||  | | ||||||||||  |||| |||||| |||||||||||||||    
T  15227030 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacattacaaccatcagat 15227096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Original strand, 18161289 - 18161319
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  18161289 agttatggtgcataaggaaatccttatgcac 18161319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 20514632 - 20514710
Alignment:
Q  111 gtttgtctaacatgtgcaa-tattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattatt 188  Q
    ||||||||||||||||||| |||| |||||| ||| | |||| || |||||||||| | ||||||||||| | ||||||    
T  20514632 gtttgtctaacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatt 20514710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Original strand, 27506707 - 27506737
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  27506707 agttatggtgcataaggaaatccttatgcac 27506737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 34249677 - 34249743
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||||||||||||||||||| ||  ||||| ||||  | ||||| ||| ||||||||||||||||||    
T  34249677 gtttgtctaacatgtgcaatgttgtacatgataagacagctaaaagtattaatttttcattgaaaaa 34249743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 40022390 - 40022420
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcact 253  Q
    |||||||||||||||||||||||||||||||    
T  40022390 gttatggtgcataaggaaatccttatgcact 40022420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 1149917 - 1149946
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  1149917 gttatggtgcataaggaaatccttatgcac 1149946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 1672973 - 1672944
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  1672973 gttatggtgcataaggaaatccttatgcac 1672944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 4835520 - 4835549
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  4835520 gttatggtgcataaggaaatccttatgcac 4835549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 10237526 - 10237497
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  10237526 gttatggtgcataaggaaatccttatgcac 10237497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 15227202 - 15227173
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  15227202 gttatggtgcataaggaaatccttatgcac 15227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 15809882 - 15809853
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  15809882 gttatggtgcataaggaaatccttatgcac 15809853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 17792934 - 17792905
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  17792934 gttatggtgcataaggaaatccttatgcac 17792905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 24473286 - 24473257
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  24473286 gttatggtgcataaggaaatccttatgcac 24473257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 34633215 - 34633244
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  34633215 gttatggtgcataaggaaatccttatgcac 34633244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 34647173 - 34647202
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  34647173 gttatggtgcataaggaaatccttatgcac 34647202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 35301631 - 35301660
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  35301631 gttatggtgcataaggaaatccttatgcac 35301660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 35448652 - 35448623
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  35448652 gttatggtgcataaggaaatccttatgcac 35448623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 39657710 - 39657739
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  39657710 gttatggtgcataaggaaatccttatgcac 39657739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 1209827 - 1209799
Alignment:
Q  224 ttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcac 1209799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 18056784 - 18056880
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  18056784 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 18056880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 22348039 - 22348135
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||||||   ||| |||||||| |||||||||| |||||||||  ||||||||||||||| || |||||    
T  22348039 ggcaaaagttatggtgcataaggaaatccttatgcaccgcgcataaacacttcacaaccatcatatctagtgt--acacgtgtaataatcctaggcttc 22348135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 313750 - 313815
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  313750 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaa 313815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 39150504 - 39150439
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  39150504 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaa 39150439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 51382372 - 51382437
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  51382372 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 51382437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 45889596 - 45889692
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||| |||||||||||||||||| ||||| |||  |||| ||||| |||||||||||||||||||  ||| ||| |||||||||||||| |||||    
T  45889596 ggcaaaaggtatggtgcataaggaaattcttatccaccgtgcataaacattttacaaccatcagatcta--gtatacatgtgtaataatcttaggcttc 45889692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 305
Target Start/End: Original strand, 16115851 - 16115938
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    ||||||||||||  |||||||||||||||||||||||  |||| |||||||| |||||||||| ||||| |||  |||||||||||||||    
T  16115851 ggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctaatgt--acacgtgtaataatc 16115938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 39627749 - 39627683
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| || |||| |||||||||    
T  39627749 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaa 39627683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 17919454 - 17919519
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||||  ||||||||||| ||||||| ||||||| |||||||||||||    
T  17919454 gtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaa 17919519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 305
Target Start/End: Complemental strand, 23320158 - 23320063
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcact--------atgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    ||||||||||||||||||||||||||||||||||| ||        ||||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  23320158 ggcaaaagttatggtgcataaggaaatccttatgctcttaggtatcatgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 23320063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 38539087 - 38539168
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 192  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| |||| | | ||||||||||    
T  38539087 gtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattatta 38539168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 38561305 - 38561386
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 192  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| |||| | | ||||||||||    
T  38561305 gtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattatta 38561386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 44918025 - 44918090
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  44918025 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaa 44918090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 32716339 - 32716275
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||| |||||||    
T  32716339 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaa 32716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 1502897 - 1502832
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| ||||||||    
T  1502897 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaa 1502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 8062206 - 8062270
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||| ||||||||||||||||  ||||||||||| ||||||| ||||||| |||||||||||||    
T  8062206 tttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaa 8062270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 6754474 - 6754536
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||| |||||||||||| |||||||  |||||| |||| |||||||    
T  6754474 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa 6754536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 30171879 - 30171945
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||    
T  30171879 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaa 30171945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 30187420 - 30187486
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||    
T  30187420 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaa 30187486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 34801968 - 34802034
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||    
T  34801968 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaa 34802034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 7520178 - 7520107
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 179  Q
    |||||||| |||| |||||||||||| |||||||||| | ||||||| ||||||| |||| ||| |||||||    
T  7520178 agagtttgactaaaatgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaata 7520107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 37639368 - 37639428
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  37639368 tccttatgcaccctgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 37639428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 3121117 - 3121183
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    |||||||||||| ||||||||||||||| ||||||||| || |||| |||| || |||| |||||||    
T  3121117 gagtttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattgaaa 3121183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 41624832 - 41624894
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||| |||||||||| | |||||||  |||||| |||| |||||||    
T  41624832 ttgtctaacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaa 41624894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 23591698 - 23591763
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||| ||| |||||||||| | |||||||  |||||| |||| ||||||||    
T  23591698 gtttgtctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaa 23591763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 23921963 - 23921898
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    |||||||||||| |||||||||||||||||||||||   |||| || ||||| | |||||||||||    
T  23921963 ggcaaaagttattgtgcataaggaaatccttatgcatcgtgcataagcacttcataaccatcagat 23921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 36578330 - 36578399
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaat 178  Q
    |||||| |||||||||||||||||| |||||||||| | || |||| |||||||||| | ||| ||||||    
T  36578330 gagtttatctaacatgtgcaatattgcacatgttaaagcaattaaaagtagtaatttcttattaaaaaat 36578399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 399600 - 399544
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    |||||||||||||| |||||||| |||||||||  | ||||||| ||||||||||||    
T  399600 gtttgtctaacatgcgcaatattgcacatgttatagcaactaaacgtagtaattttt 399544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 23576591 - 23576527
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||| |||  || |||| |||||||    
T  23576591 gtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattgaaa 23576527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 35198220 - 35198159
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||  |||| |||||||| ||| ||||||||||||||||  |||||||||||||||    
T  35198220 tccttatgcaccctgcataaacacttcacagccatcagatctagtgt--acacgtgtaataatc 35198159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 179647 - 179695
Alignment:
Q  255 tgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  179647 tgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 179695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 1395393 - 1395358
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    |||||||||||||||||||||||||||||| |||||    
T  1395393 gttatggtgcataaggaaatccttatgcaccatgca 1395358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 6520712 - 6520755
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||    
T  6520712 gtttgtctaacatgtacaatattacacaggttaaagaaactaaa 6520755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 19897654 - 19897693
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgcagaaa 262  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  19897654 gttatggtgcataaggaaatccttatgcaccgtgcagaaa 19897693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 29945458 - 29945423
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29945458 gttatggtgcataaggaaatccttatgcactctgca 29945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 30802440 - 30802492
Alignment:
Q  260 aaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    ||||| || ||||||||||||||||||||  |||||||||||||||||| |||||    
T  30802440 aaacatttcacaaccatcagatctagtgt--acacgtgtaataatcttaggcttc 30802492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 32143811 - 32143776
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32143811 gttatggtgcataaggaaatccttatgcactctgca 32143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 305
Target Start/End: Complemental strand, 8402371 - 8402289
Alignment:
Q  214 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||||||||| ||||||||||  |||||||        |||||||| | |||||||||||||||||||||||  ||||||||||    
T  8402371 ttggcaaaagttatggtggataaggaaatttttatgcat-------aaacacttcataaccatcagatctagtgtacaca--tgtaataatc 8402289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 6314288 - 6314259
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  6314288 gttatggtgcataaggaaatccttatgcac 6314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 9041093 - 9041064
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  9041093 gttatggtgcataaggaaatccttatgcac 9041064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 9628641 - 9628612
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  9628641 gttatggtgcataaggaaatccttatgcac 9628612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 10974635 - 10974664
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  10974635 gttatggtgcataaggaaatccttatgcac 10974664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 14229174 - 14229203
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  14229174 gttatggtgcataaggaaatccttatgcac 14229203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 16976127 - 16976098
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  16976127 gttatggtgcataaggaaatccttatgcac 16976098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 17811325 - 17811296
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  17811325 gttatggtgcataaggaaatccttatgcac 17811296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 17893074 - 17893103
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  17893074 gttatggtgcataaggaaatccttatgcac 17893103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 17893315 - 17893286
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  17893315 gttatggtgcataaggaaatccttatgcac 17893286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 23817482 - 23817453
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  23817482 gttatggtgcataaggaaatccttatgcac 23817453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 24636098 - 24636069
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  24636098 gttatggtgcataaggaaatccttatgcac 24636069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 31764015 - 31763986
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  31764015 gttatggtgcataaggaaatccttatgcac 31763986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 32595325 - 32595296
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  32595325 gttatggtgcataaggaaatccttatgcac 32595296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 33156994 - 33157023
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  33156994 gttatggtgcataaggaaatccttatgcac 33157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 34050461 - 34050428
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaa 144  Q
    ||||||||||||||||||||||| ||||||||||    
T  34050461 gtttgtctaacatgtgcaatattgcacatgttaa 34050428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 42134175 - 42134146
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  42134175 gttatggtgcataaggaaatccttatgcac 42134146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 43317488 - 43317541
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaa 162  Q
    ||||||||| |||||||||||||||  ||||||||| | ||||||| |||||||    
T  43317488 gagtttgtcaaacatgtgcaatattgtacatgttaaagcaactaaaagtagtaa 43317541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 43452714 - 43452685
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  43452714 gttatggtgcataaggaaatccttatgcac 43452685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 48762225 - 48762254
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  48762225 gttatggtgcataaggaaatccttatgcac 48762254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 49936831 - 49936860
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  49936831 gttatggtgcataaggaaatccttatgcac 49936860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 49992520 - 49992549
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  49992520 gttatggtgcataaggaaatccttatgcac 49992549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 4097975 - 4097911
Alignment:
Q  215 tggcaaaagttatggtgcataag-gaaatccttatgcactatgcagaaacactttacaaccatca 278  Q
    |||||||||||||||||||||||  |  |||||||||||  |||| |||||||| ||||||||||    
T  4097975 tggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatca 4097911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 11422612 - 11422584
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  11422612 gttatggtgcataaggaaatccttatgca 11422584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 23920973 - 23921001
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  23920973 gttatggtgcataaggaaatccttatgca 23921001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 41033262 - 41033298
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||  |||||||||||    
T  41033262 ggcaaaagttatggtgcataaggatttccttatgcac 41033298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 42133946 - 42133974
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  42133946 gttatggtgcataaggaaatccttatgca 42133974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 45849111 - 45849139
Alignment:
Q  224 ttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||    
T  45849111 ttatggtgcataaggaaatccttatgcac 45849139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 49937005 - 49936937
Alignment:
Q  214 ttggcaaaagttatggtgcataag-gaaatccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    ||||||||||||||||||||||||  |  |||||||||||  |||| |||||| | |||||||||||||    
T  49937005 ttggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 49936937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 314
Target Start/End: Original strand, 30428871 - 30428969
Alignment:
Q  214 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgctt 313  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||| || ||||||||||||||||||||  ||||||||||||||| || ||||    
T  30428871 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacatttcacaaccatcagatctagtgt--acacgtgtaataatcctaggctt 30428968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 214 - 313
Target Start/End: Complemental strand, 15975003 - 15974906
Alignment:
Q  214 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgctt 313  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||| || |||||||||||  ||||||||||||| ||||    
T  15975003 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcatatttagtgtacaca--tgtaataatcttaggctt 15974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 39757290 - 39757222
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  39757290 agagtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaa 39757222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 48690895 - 48690999
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttca 315  Q
    ||||||||||||||||||||| |||||||||||||||  |||| ||||| || |||||||||| |||||||||  ||||||||||||||| || ||||||    
T  48690895 ggcaaaagttatggtgcataaagaaatccttatgcaccgtgcataaacagttcacaaccatcaaatctagtgt--acacgtgtaataatcataggcttca 48690992  T
Q  316 tttctac 322  Q
    | |||||    
T  48690993 tctctac 48690999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 46024025 - 46024114
Alignment:
Q  214 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||||||||||| ||| ||||||||||||||  |||| |||||||| ||||||||||||| ||||||  |||||||||||||||    
T  46024025 ttggcaaaagttatggtgcacaagaaaatccttatgcaccgtgcataaacacttcacaaccatcagatatagtgt--acacgtgtaataatc 46024114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 9331962 - 9332027
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  9331962 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 9332027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 19889341 - 19889406
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  19889341 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaa 19889406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 24250314 - 24250379
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||    
T  24250314 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaa 24250379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 47120371 - 47120306
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||||||||||||    
T  47120371 gtttgtctaacatgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaa 47120306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 19868112 - 19868180
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||| ||||||| ||||||||||||||    
T  19868112 gagtttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaa 19868180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 36548636 - 36548572
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  36548636 tttgtctaacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaa 36548572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 23982938 - 23982868
Alignment:
Q  106 ttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||| ||||    
T  23982938 ttagggtttgtctaacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaa 23982868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 12279745 - 12279818
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgta 289  Q
    |||||||||||||||||||||||||||| ||||||||  |||| ||| |||| |||||||| ||||||||||||    
T  12279745 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaagacttcacaaccattagatctagtgta 12279818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 32117815 - 32117896
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 192  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| |||| | | ||||||||||    
T  32117815 gtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattatta 32117896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 48305236 - 48305312
Alignment:
Q  215 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacac 292  Q
    |||||||||||||||||||||||||  |||||||||||  |||| ||||||||||||| |||| ||||||||||||||    
T  48305236 tggcaaaagttatggtgcataaggat-tccttatgcaccgtgcataaacactttacaaacatcggatctagtgtacac 48305312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 3562054 - 3561990
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||| |||||||||||| ||||||| | ||||| |||||||||||||    
T  3562054 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaa 3561990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 323
Target Start/End: Original strand, 28396722 - 28396827
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttca 315  Q
    ||||||||||| | |||||||||||||||||||||||  |||| ||||| || |||| |||||||||||||||  ||| | ||||||||| || ||||||    
T  28396722 ggcaaaagttacgatgcataaggaaatccttatgcaccgtgcataaacatttcacaatcatcagatctagtgt--acaagagtaataatcctaggcttca 28396819  T
Q  316 tttctaca 323  Q
    | ||||||    
T  28396820 tctctaca 28396827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 5909459 - 5909394
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| | ||||| |||||||||||||    
T  5909459 gtttgactaacatgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaa 5909394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 12086108 - 12086043
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||| |||||| |||||||||||| ||||||| ||||||| ||||| |||||||    
T  12086108 gtttgtctaacatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaa 12086043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 24463132 - 24463067
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||| |||||| |||||||||||| ||||||| |||||||||| | ||||||||    
T  24463132 gtttgtctaacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaa 24463067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 25778837 - 25778902
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    |||||||||||||||||||||| |||| |||||||||| |||| || ||||| |||||||||||||    
T  25778837 ggcaaaagttatggtgcataagaaaattcttatgcactgtgcataagcacttcacaaccatcagat 25778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 39869123 - 39869188
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||  |||||| |||||||||||||    
T  39869123 gtttgtctaacatatgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaa 39869188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 33342989 - 33343053
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| |||||||    
T  33342989 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 33343053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 7170005 - 7170067
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||| |||||||||||| |||||||  |||||| |||| |||||||    
T  7170005 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa 7170067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 5757413 - 5757474
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  5757413 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 5757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 12279641 - 12279717
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacac 292  Q
    ||||||||||||||| |||||||||||| ||||||||  || | ||| |||| |||||||| ||||| |||||||||    
T  12279641 ggcaaaagttatggtacataaggaaatcattatgcaccgtgtataaagacttcacaaccattagatccagtgtacac 12279717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 46290011 - 46290075
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| |||| || |||| |||||||    
T  46290011 gtttgtctaacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 46290075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 34270266 - 34270309
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  34270266 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaa 34270309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 47457638 - 47457583
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    |||||||||||||||||||||| ||||||||||   ||||||| ||||||||||||    
T  47457638 tttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaattttt 47457583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 44806934 - 44807000
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||||||||| ||||||||||||||||||||||||  |  |||| |||||| ||||||| |||||||    
T  44806934 gtttgtctaatatgtgcaatattacacatgttaagacatttaaaagtagtattttttcactgaaaaa 44807000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 48691038 - 48691097
Alignment:
Q  262 acactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttcatttctaca 323  Q
    |||||| ||||||||||||||||||||  ||||||||||||||| || ||||||| ||||||    
T  48691038 acacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttcatctctaca 48691097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 12624638 - 12624714
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattatt 188  Q
    |||||| ||| ||||||||||||| |||| |||||| |||||||  |||| |||||| ||||||||||||| ||||||    
T  12624638 gtttgtttaagatgtgcaatattatacatattaaggtaactaaa-atagttattttttattgaaaaatatcaattatt 12624714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 46573563 - 46573469
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    ||||||||||||| |||||||||   | |||||||||  |  | |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  46573563 ggcaaaagttatgatgcataaggt--ttcttatgcaccgtatataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 46573469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 763869 - 763834
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  763869 gttatggtgcataaggaaatccttatgcactgtgca 763834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 6620621 - 6620656
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    |||||||||||||| |||||||||||||||||||||    
T  6620621 gttatggtgcataacgaaatccttatgcactatgca 6620656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 15973862 - 15973897
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    |||||||||||||||||||||||||||||| |||||    
T  15973862 gttatggtgcataaggaaatccttatgcaccatgca 15973897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 46572576 - 46572611
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    |||||||||||||||||||||||||||||| |||||    
T  46572576 gttatggtgcataaggaaatccttatgcaccatgca 46572611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 25709577 - 25709515
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattga 173  Q
    |||| ||||||||||| |||||| ||||||||||   ||||||| |||||||||||| |||||    
T  25709577 gtttttctaacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattga 25709515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 29398292 - 29398226
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| ||||||||||   ||||||   || ||||||||||||||||||    
T  29398292 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaaa 29398226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 4161885 - 4161938
Alignment:
Q  114 tgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    ||||||||||||| |||||| |||||||||| | ||||||| ||||||| ||||    
T  4161885 tgtctaacatgtgtaatattgcacatgttaaaggaactaaaagtagtaactttt 4161938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 11732044 - 11732073
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  11732044 gttatggtgcataaggaaatccttatgcac 11732073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 12650821 - 12650886
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||| |||| |||||||||||||  ||||||||||  |||||||  |||||| |||||||||||||    
T  12650821 gtttatctagcatgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaa 12650886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 16933137 - 16933166
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  16933137 gttatggtgcataaggaaatccttatgcac 16933166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 16938520 - 16938549
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  16938520 gttatggtgcataaggaaatccttatgcac 16938549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 26945756 - 26945727
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  26945756 gttatggtgcataaggaaatccttatgcac 26945727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 30884116 - 30884145
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  30884116 gttatggtgcataaggaaatccttatgcac 30884145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 31660241 - 31660212
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  31660241 gttatggtgcataaggaaatccttatgcac 31660212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 33798775 - 33798746
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  33798775 gttatggtgcataaggaaatccttatgcac 33798746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 35737120 - 35737091
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  35737120 gttatggtgcataaggaaatccttatgcac 35737091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 38837771 - 38837742
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  38837771 gttatggtgcataaggaaatccttatgcac 38837742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 41911006 - 41911035
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  41911006 gttatggtgcataaggaaatccttatgcac 41911035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 44426600 - 44426629
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  44426600 gttatggtgcataaggaaatccttatgcac 44426629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 46004577 - 46004548
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  46004577 gttatggtgcataaggaaatccttatgcac 46004548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 46358692 - 46358663
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  46358692 gttatggtgcataaggaaatccttatgcac 46358663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 47340319 - 47340290
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  47340319 gttatggtgcataaggaaatccttatgcac 47340290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 48692092 - 48692063
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  48692092 gttatggtgcataaggaaatccttatgcac 48692063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 48830641 - 48830612
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  48830641 gttatggtgcataaggaaatccttatgcac 48830612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 7845139 - 7845111
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  7845139 gttatggtgcataaggaaatccttatgca 7845111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 31365273 - 31365301
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  31365273 gttatggtgcataaggaaatccttatgca 31365301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 34227678 - 34227706
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  34227678 gttatggtgcataaggaaatccttatgca 34227706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 43742251 - 43742279
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  43742251 gttatggtgcataaggaaatccttatgca 43742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 44141290 - 44141229
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||  |||| |||||||| ||||||||| ||| ||||||  |||||||||||||||    
T  44141290 tccttatgcaccctgcataaacacttcacaaccatctgatttagtgt--acacgtgtaataatc 44141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 46004342 - 46004378
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  46004342 agttatggtgcataacgaaatccttatgcactctgca 46004378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 314
Target Start/End: Original strand, 27764238 - 27764336
Alignment:
Q  214 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgctt 313  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||||||  |||||||||||||||||||  ||||||||||||||| || ||||    
T  27764238 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcgcaaccatcagatctagtgt--acacgtgtaataatcctacgctt 27764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 36621762 - 36621670
Alignment:
Q  220 aaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||||||||| |||  ||||||||||||||| ||||||||    
T  36621762 aaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctaatgt--acacgtgtaataatcctatgcttc 36621670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 26447477 - 26447391
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    ||||||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  26447477 ggcaaaagtaatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 26447391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 305
Target Start/End: Original strand, 45255975 - 45256062
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||| ||||||| ||||||  |||||||||||||||    
T  45255975 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatatagtgt--acacgtgtaataatc 45256062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 22181307 - 22181223
Alignment:
Q  219 aaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    ||||||||||||||||||||||||||||||||||  |||| ||| |||| ||||||||||||| ||||||  |||||||||||||||    
T  22181307 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaaaacttcacaaccatcagatttagtgt--acacgtgtaataatc 22181223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 49332328 - 49332402
Alignment:
Q  106 ttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatat 180  Q
    |||| ||||||||||||||||||||||| |||||||||||| || |||| ||| ||| |||||||||||||||||    
T  49332328 ttagggtttgtctaacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatat 49332402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 50643742 - 50643808
Alignment:
Q  215 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||||| | |||||||||||    
T  50643742 tggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcataaccatcagat 50643808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 49228357 - 49228422
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| ||||||| |||||||||||||    
T  49228357 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 49228422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 9327047 - 9326979
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 179  Q
    ||||||||||||| ||||||||| || ||||||| |||||||| |||||||| ||||||||||||||||    
T  9327047 gtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaaata 9326979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 9373769 - 9373701
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 179  Q
    ||||||||||||| ||||||||| || ||||||| |||||||| |||||||| ||||||||||||||||    
T  9373769 gtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaaata 9373701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 9382081 - 9382013
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 179  Q
    ||||||||||||| ||||||||| || ||||||| |||||||| |||||||| ||||||||||||||||    
T  9382081 gtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaaata 9382013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 10658621 - 10658557
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| || |||| |||||||    
T  10658621 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaa 10658557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 10872766 - 10872702
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| || |||| |||||||    
T  10872766 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaa 10872702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 16667567 - 16667496
Alignment:
Q  106 ttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||| ||||||||||||||||||| ||| |||||||||||  | ||||| ||||||||||||||||||||||    
T  16667567 ttagggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaa 16667496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 7349689 - 7349754
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||| |||||||||| |||||||||||| ||||||| ||| ||| |||||||||||||    
T  7349689 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaa 7349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 21097140 - 21097226
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    |||||||||||  ||||||||||||||||||||||||  || | |||||||| |||||||| ||||||||| |  ||||||||||||||    
T  21097140 ggcaaaagttaccgtgcataaggaaatccttatgcaccgtgtataaacacttcacaaccattagatctagttt--acacgtgtaataat 21097226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 9759319 - 9759255
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| |||||||    
T  9759319 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 9759255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 50352303 - 50352367
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| |||||||    
T  50352303 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 50352367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 23553571 - 23553626
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  23553571 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaattttt 23553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 29826669 - 29826606
Alignment:
Q  218 caaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    ||||||||||||| |||||||||||||||||||||  |||| || ||||| |||||||||||||    
T  29826669 caaaagttatggtacataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 29826606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 8736988 - 8736922
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||    
T  8736988 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaa 8736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 29190982 - 29190928
Alignment:
Q  122 atgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||| || ||||||||| ||||||| |||||||||||||||||||||    
T  29190982 atgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaa 29190928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 38485739 - 38485643
Alignment:
Q  212 tgttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgc 311  Q
    ||||| |||||||||||||||||||||||    ||||||||  |||| |||| ||| |||||||||||||||| |||  ||||||||||||||| || ||    
T  38485739 tgttgtcaaaagttatggtgcataaggaa----ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgt--acacgtgtaataatcctaggc 38485646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 47327070 - 47327004
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||| ||||||| ||| |||||||||||  | ||||| ||||||||||||||||||||||    
T  47327070 gtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaa 47327004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 47341866 - 47341800
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||| ||||||| ||| |||||||||||  | ||||| ||||||||||||||||||||||    
T  47341866 gtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaa 47341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 10389445 - 10389380
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||||||||||||||  | ||||||| ||| ||| |||| ||||||||    
T  10389445 gtttgtctaacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaa 10389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 27756574 - 27756643
Alignment:
Q  123 tgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 192  Q
    ||||||||||| ||||||||||||||||||||||||| || ||| ||||| |||| | | ||||||||||    
T  27756574 tgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattatta 27756643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 4168384 - 4168445
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||  |||| |||||||| |||||||||||||||||||||||||  ||||||||||    
T  4168384 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacaca--tgtaataatc 4168445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 25843289 - 25843357
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||| |||||| | ||||||||| | ||||||| ||||||| |||| |||||||||    
T  25843289 gagtttgtctaacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaaaa 25843357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 40049559 - 40049615
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    ||||||||||||||||||||||| |||||||||| | ||||||| ||||||| ||||    
T  40049559 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttt 40049615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 49181074 - 49181138
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||||||| |||||||||||| |||||||||||||||||||| |||| ||  ||| |||||||||    
T  49181074 ttgtctaaaatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaa 49181138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 36000119 - 36000052
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||| |||||||| |||||||||  ||||||||||| ||||||| ||||||| |||| ||||||||    
T  36000119 gagtttatctaacatatgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaa 36000052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 36968283 - 36968338
Alignment:
Q  106 ttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagta 161  Q
    |||| |||| ||||||||||||||||||||||||||||| | ||||||| ||||||    
T  36968283 ttagggtttatctaacatgtgcaatattacacatgttaaagtaactaaaagtagta 36968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 54495820 - 54495749
Alignment:
Q  106 ttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||| ||||||||||||||||||| ||| |||||||||||  | ||||| ||||||||||||  ||||||||    
T  54495820 ttagggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaa 54495749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 6875500 - 6875578
Alignment:
Q  110 agtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattatt 188  Q
    |||||||||||||| ||||||||| ||||||||||   |||||||  ||||||| ||| |||| |||||||| ||||||    
T  6875500 agtttgtctaacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatt 6875578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 49650211 - 49650276
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||| ||||||||||| ||||| |||||| ||||||| | ||||| |||||||| ||||    
T  49650211 gtttgtctaacctgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaa 49650276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 50563794 - 50563708
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    ||||||||||||  ||||||||  | | | |||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  50563794 ggcaaaagttattatgcataagatatttcatatgcaccctgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 50563708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 39876844 - 39876895
Alignment:
Q  124 gtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    |||||||||| |||||||||||| ||||||| ||||||| |||| |||||||    
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 39876895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 48911012 - 48910969
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||||||||||||| |||||||||||  |||||||    
T  48911012 gtttgtctaacatgtgcaatattgcacatgttaagataactaaa 48910969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 637883 - 637929
Alignment:
Q  245 ttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 291  Q
    ||||||||  |||| |||||||| |||||||||||||||||||||||    
T  637883 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 637929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 1377454 - 1377504
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagta 161  Q
    |||||||||||| ||||||||||||||||||||| | || |||| ||||||    
T  1377454 gtttgtctaacacgtgcaatattacacatgttaaagtaattaaaagtagta 1377504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 1729678 - 1729604
Alignment:
Q  219 aaaagttatggtgcataaggaaatcctt-atgcactatgcagaaacactttacaaccatcagatctagtgtacac 292  Q
    |||||||||||||||||||  | | ||| || |||  |||| |||||||| ||||||||||||||||||||||||    
T  1729678 aaaagttatggtgcataagtcatttctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacac 1729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 8157332 - 8157302
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  8157332 agttatggtgcataaggaaatccttatgcac 8157302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 23545476 - 23545542
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| ||||||||||   ||||||  ||||||||||||  ||||||||    
T  23545476 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaa 23545542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 24243068 - 24243034
Alignment:
Q  110 agtttgtctaacatgtgcaatattacacatgttaa 144  Q
    |||||||||||||||||||| ||||||||||||||    
T  24243068 agtttgtctaacatgtgcaacattacacatgttaa 24243034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 34941278 - 34941344
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||||||||||||||| |||||| ||||| |||||| ||||||| |||  || |||| |||||||||    
T  34941278 gtttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaa 34941344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Original strand, 49492405 - 49492435
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  49492405 agttatggtgcataaggaaatccttatgcac 49492435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 55765481 - 55765547
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    ||||||||||||||||||||||  | | ||||||||||  |||| |||||| |||||||||||||||    
T  55765481 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagat 55765547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 1492674 - 1492703
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  1492674 gttatggtgcataaggaaatccttatgcac 1492703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 2124346 - 2124375
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  2124346 gttatggtgcataaggaaatccttatgcac 2124375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 6841823 - 6841852
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  6841823 gttatggtgcataaggaaatccttatgcac 6841852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 8165764 - 8165793
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  8165764 gttatggtgcataaggaaatccttatgcac 8165793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 10473690 - 10473661
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  10473690 gttatggtgcataaggaaatccttatgcac 10473661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 11786146 - 11786117
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  11786146 gttatggtgcataaggaaatccttatgcac 11786117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 11798313 - 11798284
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  11798313 gttatggtgcataaggaaatccttatgcac 11798284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 12722739 - 12722768
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  12722739 gttatggtgcataaggaaatccttatgcac 12722768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 13635619 - 13635648
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  13635619 gttatggtgcataaggaaatccttatgcac 13635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 15051030 - 15051059
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  15051030 gttatggtgcataaggaaatccttatgcac 15051059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 17109960 - 17109931
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  17109960 gttatggtgcataaggaaatccttatgcac 17109931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 21995672 - 21995701
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  21995672 gttatggtgcataaggaaatccttatgcac 21995701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 22180208 - 22180237
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  22180208 gttatggtgcataaggaaatccttatgcac 22180237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 25715645 - 25715674
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  25715645 gttatggtgcataaggaaatccttatgcac 25715674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 26577263 - 26577292
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  26577263 gttatggtgcataaggaaatccttatgcac 26577292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 30358879 - 30358850
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  30358879 gttatggtgcataaggaaatccttatgcac 30358850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 30597871 - 30597842
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  30597871 gttatggtgcataaggaaatccttatgcac 30597842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 30779345 - 30779374
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  30779345 gttatggtgcataaggaaatccttatgcac 30779374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 31763150 - 31763121
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  31763150 gttatggtgcataaggaaatccttatgcac 31763121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 33819693 - 33819722
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  33819693 gttatggtgcataaggaaatccttatgcac 33819722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 33883296 - 33883325
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  33883296 gttatggtgcataaggaaatccttatgcac 33883325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 35911143 - 35911180
Alignment:
Q  139 tgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  35911143 tgttaaggaaactaaaagtagtaattttgcattgaaaa 35911180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 36924243 - 36924272
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  36924243 gttatggtgcataaggaaatccttatgcac 36924272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 37059713 - 37059742
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  37059713 gttatggtgcataaggaaatccttatgcac 37059742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 39539465 - 39539530
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||| |||| ||| |||||| ||||  | |||||  |||||||||||||||||||||    
T  39539465 tttgtctaacatgcgcaacattgcacatgctaagacatctaaacttagtaatttttcattgaaaaa 39539530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 45256937 - 45256908
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  45256937 gttatggtgcataaggaaatccttatgcac 45256908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 49425951 - 49425980
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  49425951 gttatggtgcataaggaaatccttatgcac 49425980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 50644712 - 50644683
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  50644712 gttatggtgcataaggaaatccttatgcac 50644683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 53441492 - 53441463
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  53441492 gttatggtgcataaggaaatccttatgcac 53441463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 53865285 - 53865256
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  53865285 gttatggtgcataaggaaatccttatgcac 53865256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 54895625 - 54895596
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  54895625 gttatggtgcataaggaaatccttatgcac 54895596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 639035 - 639007
Alignment:
Q  224 ttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||    
T  639035 ttatggtgcataaggaaatccttatgcac 639007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 3085352 - 3085420
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 179  Q
    ||||||||||||||||||| ||| ||||||||||   || |||  ||||||||||||  ||||||||||    
T  3085352 gtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaattttttcttgaaaaata 3085420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 9971742 - 9971710
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgtta 143  Q
    ||||||||||||||||||||||| |||||||||    
T  9971742 gtttgtctaacatgtgcaatattgcacatgtta 9971710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 30597697 - 30597765
Alignment:
Q  214 ttggcaaaagttatggtgcataag-gaaatccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    ||||||||||||||||||||||||  |  |||||||||||  |||| |||||| | |||||||||||||    
T  30597697 ttggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 30597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 31762931 - 31762959
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  31762931 gttatggtgcataaggaaatccttatgca 31762959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 36309419 - 36309447
Alignment:
Q  224 ttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||    
T  36309419 ttatggtgcataaggaaatccttatgcac 36309447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 48077910 - 48077874
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||  |||||||||||||||||||||||    
T  48077910 ggcaaaagttatcatgcataaggaaatccttatgcac 48077874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 13612 - 13709
Alignment:
Q  215 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||| |||  |||| |||||||| |||||||||||||||||||||||||  |||||||||| || |||||    
T  13612 tggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacaca--tgtaataatcctacgcttc 13709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 25299 - 25207
Alignment:
Q  214 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatctta 308  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||||||  |||||||| |||||||||    
T  25299 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgt--acacgtgtcataatctta 25207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 25017280 - 25017196
Alignment:
Q  218 caaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  25017280 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 25017196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 216 - 305
Target Start/End: Complemental strand, 28070218 - 28070131
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||| ||||||||||||||  |||||||||||||||    
T  28070218 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatctagtgt--acacgtgtaataatc 28070131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 5958301 - 5958236
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  5958301 gtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaa 5958236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 13362772 - 13362866
Alignment:
Q  218 caaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  | ||||||||||||| || |||||    
T  13362772 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--atacgtgtaataatcataggcttc 13362866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 23335773 - 23335676
Alignment:
Q  215 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||| |||||||  |||| ||||| || ||||||||||||||||||||  ||||||||||||||| || |||||    
T  23335773 tggcaaaagttatggtgcataaggaaatccgtatgcaccgtgcataaacatttcacaaccatcagatctagtgt--acacgtgtaataatcataggcttc 23335676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 34329127 - 34329203
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacac 292  Q
    |||||||||||||||||||||||||||| ||||||||  |||| |||||||| ||||||||||||||||||||||||    
T  34329127 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacac 34329203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 12642173 - 12642105
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||    
T  12642173 agagtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaa 12642105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 32020161 - 32020081
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 192  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||| |||||||| | ||||||||||||    
T  32020161 tttgtctaacatgtgcaatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaaacaccgattattatta 32020081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 2795524 - 2795589
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  2795524 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 2795589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 11636732 - 11636797
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||    
T  11636732 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaa 11636797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 34578012 - 34578077
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||||    
T  34578012 gtttgtctaacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaa 34578077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 13516103 - 13516022
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 192  Q
    |||| ||||| ||||| |||||| ||||||||||||||||||||||||| || ||| ||||| |||||||| ||||||||||    
T  13516103 gtttatctaatatgtgtaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaatatcaattattatta 13516022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 15190873 - 15190938
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| || ||||||||| || |||| |||||||||||||||||||||    
T  15190873 gtttgtctaacatgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaa 15190938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 9184209 - 9184273
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||| |||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  9184209 tttgtctaacatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 9184273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 30328504 - 30328439
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||  ||||||| ||||| |||||||||| ||||    
T  30328504 gtttgtctaacatgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaa 30328439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 30839782 - 30839846
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| |||||||    
T  30839782 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 30839846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 31366129 - 31366073
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||||    
T  31366129 gtttgtctaacatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttt 31366073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 36597580 - 36597644
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| |||||||    
T  36597580 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaa 36597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 40512952 - 40513016
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||| | ||||||| |||| |||||||    
T  40512952 gtttgtctaacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattgaaa 40513016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 8103755 - 8103693
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||| |||||||||||| |||||||  |||||| |||| |||||||    
T  8103755 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa 8103693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 10665142 - 10665077
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||| |||||||| |||||| |||||||||||| ||||||| ||| ||| |||||||||||||    
T  10665142 gtttgtccaacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaa 10665077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 16668833 - 16668763
Alignment:
Q  242 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  16668833 tccttatgcaccctgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 16668763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 2827093 - 2827036
Alignment:
Q  255 tgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||| |||||| |||||    
T  2827093 tgcataaacactttacaaccatcagatctagtgt--acacgtgtaattatcttaggcttc 2827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 18465582 - 18465531
Alignment:
Q  255 tgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatctta 308  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  18465582 tgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatctta 18465531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 39086749 - 39086715
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcactatg 256  Q
    |||||||||||||||||||||||||||||||||||    
T  39086749 agttatggtgcataaggaaatccttatgcactatg 39086715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 4047413 - 4047478
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||| |||||||| | ||||||| || ||||||||| ||||||| ||||||| |||||||||||||    
T  4047413 gtttatctaacatatacaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 4047478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 11375972 - 11376025
Alignment:
Q  123 tgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||| |||||||||| | ||||||| ||||||| |||||||||||||    
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaa 11376025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 10658465 - 10658397
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 179  Q
    |||||| |||||||||| |||||||||||| ||| | ||||||| |||| || ||| ||||||||||||    
T  10658465 gtttgtttaacatgtgcgatattacacatgataaaggaactaaaagtagcaactttacattgaaaaata 10658397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 42512200 - 42512271
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgt 288  Q
    |||||||||||||||  | || ||||||||||| |||  |||| |||||||| ||||||||||||||||||||    
T  42512200 ggcaaaagttatggtt-agaaagaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgt 42512271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 11360183 - 11360242
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    ||||||| | |||||||| ||||||||||||||||||   ||||||| ||||||||||||    
T  11360183 agagtttatttaacatgttcaatattacacatgttaaaacaactaaaagtagtaattttt 11360242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 13552978 - 13553049
Alignment:
Q  211 ctgttggcaaaagttatggtgcataag-gaaatccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    |||||||||||||||||||||||||||  |  |||||||||||  |||| |||||| | |||||||||||||    
T  13552978 ctgttggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 13553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 15241270 - 15241227
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||    
T  15241270 gtttgtctaacatatgcaatattgcacatgttaaagaaactaaa 15241227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 15559051 - 15559086
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    |||||||||||||||||||||||||||||| |||||    
T  15559051 gttatggtgcataaggaaatccttatgcaccatgca 15559086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 20134441 - 20134406
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  20134441 gttatggtgcataaggaaatccttatgcactctgca 20134406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 37456852 - 37456817
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    |||||||||||||||||||||||||||||| |||||    
T  37456852 gttatggtgcataaggaaatccttatgcaccatgca 37456817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 22830831 - 22830801
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  22830831 agttatggtgcataaggaaatccttatgcac 22830801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 33072675 - 33072733
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    |||||||| |||||||||||||||| ||||||||||   ||||||| |||||| |||||    
T  33072675 gagtttgtttaacatgtgcaatattgcacatgttaaatcaactaaaagtagtacttttt 33072733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 703731 - 703760
Alignment:
Q  222 agttatggtgcataaggaaatccttatgca 251  Q
    ||||||||||||||||||||||||||||||    
T  703731 agttatggtgcataaggaaatccttatgca 703760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 3340592 - 3340621
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  3340592 gttatggtgcataaggaaatccttatgcac 3340621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 3340821 - 3340788
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatg 256  Q
    |||||||||| |||||||||||||||||||||||    
T  3340821 gttatggtgcgtaaggaaatccttatgcactatg 3340788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 3883929 - 3883958
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  3883929 gttatggtgcataaggaaatccttatgcac 3883958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 11660795 - 11660824
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  11660795 gttatggtgcataaggaaatccttatgcac 11660824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 11661024 - 11660995
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  11661024 gttatggtgcataaggaaatccttatgcac 11660995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 13553155 - 13553126
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  13553155 gttatggtgcataaggaaatccttatgcac 13553126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 14394640 - 14394611
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  14394640 gttatggtgcataaggaaatccttatgcac 14394611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 14466667 - 14466634
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaa 144  Q
    ||||||||||||||||||||||| ||||||||||    
T  14466667 gtttgtctaacatgtgcaatattgcacatgttaa 14466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 14940250 - 14940279
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  14940250 gttatggtgcataaggaaatccttatgcac 14940279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 22695582 - 22695553
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  22695582 gttatggtgcataaggaaatccttatgcac 22695553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 23155527 - 23155556
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  23155527 gttatggtgcataaggaaatccttatgcac 23155556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 25545614 - 25545585
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  25545614 gttatggtgcataaggaaatccttatgcac 25545585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 26637731 - 26637760
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  26637731 gttatggtgcataaggaaatccttatgcac 26637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 35662069 - 35662098
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  35662069 gttatggtgcataaggaaatccttatgcac 35662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 39861822 - 39861793
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  39861822 gttatggtgcataaggaaatccttatgcac 39861793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 8716139 - 8716082
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttc 168  Q
    ||||||||||||| | ||||||||| || ||||||| ||||||||  |||||||||||||    
T  8716139 gagtttgtctaacgtatgcaatattgcatatgttaaagaaactaa--gtagtaatttttc 8716082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 11250134 - 11250086
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtag 159  Q
    |||||| |||||||||||||||| |||||||||| | ||||||| ||||    
T  11250134 gtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaagtag 11250086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 20134201 - 20134229
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  20134201 gttatggtgcataaggaaatccttatgca 20134229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 22672039 - 22672011
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  22672039 gttatggtgcataaggaaatccttatgca 22672011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 51362503 - 51362407
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||||||  ||||||||||||||| || |||||    
T  51362503 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgt--acacgtgtaataatcctaggcttc 51362407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 19385380 - 19385294
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||||||  ||||||||||||||    
T  19385380 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgt--acacgtgtaataat 19385294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 50754008 - 50754102
Alignment:
Q  218 caaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    ||||||||||||| |||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  50754008 caaaagttatggtacataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 50754102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 7045365 - 7045269
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    ||||||||||||||||||||||||||| |||||||||  || | |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  7045365 ggcaaaagttatggtgcataaggaaattcttatgcaccgtgtataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcgtaggcttc 7045269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 8718101 - 8718176
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 291  Q
    |||||||||||||||||||||||||||||||||||||  | || ||| |||| |||||||||||||||||||||||    
T  8718101 ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtaca 8718176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 9069988 - 9070063
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 291  Q
    |||||||||||||||||||||||||||||||||||||  | || ||| |||| |||||||||||||||||||||||    
T  9069988 ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtaca 9070063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 16277475 - 16277383
Alignment:
Q  220 aaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||| ||||||||  |||| |||||||| |||||||||| |||||||||  ||||||||||||||| || |||||    
T  16277475 aaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcatatctagtgt--acacgtgtaataatcctacgcttc 16277383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 52987702 - 52987619
Alignment:
Q  229 gtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    ||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  52987702 gtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 52987619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 3863330 - 3863395
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  3863330 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaa 3863395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 11610915 - 11610980
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  11610915 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaa 11610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 51339360 - 51339296
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  51339360 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaa 51339296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 32553367 - 32553432
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||| ||||||||||||||||||||||||||||||| || |||| ||||||| |||||||||||||    
T  32553367 gtttatctaacatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaa 32553432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 37444149 - 37444211
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||| |||||||    
T  37444149 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaa 37444211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 13495294 - 13495359
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||  || |||||||||||| ||||||| |||||||||||| ||||||||    
T  13495294 gtttgtctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaa 13495359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 20938057 - 20938122
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||| ||| |||| ||||||||    
T  20938057 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaa 20938122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 2571269 - 2571333
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||| || |||| |||||||    
T  2571269 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 2571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 54621394 - 54621330
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||| || ||||||||| || |||| |||||||||||||||| ||||    
T  54621394 tttgtctaacatgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaa 54621330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 38389447 - 38389513
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||    
T  38389447 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaa 38389513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 48240268 - 48240218
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtag 159  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  48240268 gagtttgtctaacatgtgtaatattacacatgttaaagaaactaaaagtag 48240218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 30214187 - 30214123
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||||||||||||||  ||||| |||||||  |||||| |||||||||||||    
T  30214187 gtttgtctaacatgtgcaatattacacattctaaggcaactaaa-atagtaacttttcattgaaaa 30214123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 10307767 - 10307831
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||| |||| || |||| |||||||    
T  10307767 gtttgtctaacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattgaaa 10307831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 12515651 - 12515603
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtag 159  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  12515651 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtag 12515603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 43750049 - 43750117
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||| |||||||| |||||||||||  | ||||| |||||||| ||||| ||||||    
T  43750049 agagtttgtctaacatgggcaatattgcacatgttaagacatctaaaagtagtaatgtttcactgaaaa 43750117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 47386922 - 47386988
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||||| | ||| |||| | ||||||| ||||||| |||| |||||||||    
T  47386922 gtttgtctaacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaa 47386988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 46845618 - 46845553
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||| |||||||||||| ||||| |||| | ||||||| |||| ||||||| ||||||||    
T  46845618 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaa 46845553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 50364191 - 50364256
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||||||| |||| ||||||| |||| ||||||| ||||||| || | ||||||||    
T  50364191 gtttgtctaacatgtgcagtattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaa 50364256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 9106266 - 9106333
Alignment:
Q  215 tggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    |||||||||||||||||||||||  | | ||||||||||  |||| |||||| |||||||||||||||    
T  9106266 tggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagat 9106333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 26662432 - 26662467
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| ||||    
T  26662432 gttatggtgcataaggaaatccttatgcactgtgca 26662467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 39365309 - 39365258
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaa 162  Q
    ||||||||||||||||||||||| |||||||||| |  |||||| |||||||    
T  39365309 gtttgtctaacatgtgcaatattgcacatgttaaagctactaaaagtagtaa 39365258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 17627257 - 17627210
Alignment:
Q  255 tgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  17627257 tgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 17627210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 27446256 - 27446226
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  27446256 agttatggtgcataaggaaatccttatgcac 27446226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 35094972 - 35095022
Alignment:
Q  127 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||| |||||||||||| ||||||| | ||||| ||||||||||||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaaa 35095022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 37055544 - 37055478
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||| ||||||| || ||||||| | |||||||  |||||| ||| ||||||||||    
T  37055544 gtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaa 37055478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 39099189 - 39099293
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaat--------ccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatctt 307  Q
    |||||||||||||||||||||| ||||        ||||||||||  |||| ||| | || ||||||||||||||||||||  ||||||||||||||| |    
T  39099189 ggcaaaagttatggtgcataagaaaattcttatttccttatgcaccgtgcataaatatttcacaaccatcagatctagtgt--acacgtgtaataatcct 39099286  T
Q  308 atgcttc 314  Q
    | |||||    
T  39099287 aggcttc 39099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 47924409 - 47924379
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  47924409 agttatggtgcataaggaaatccttatgcac 47924379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 50755235 - 50755205
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||||    
T  50755235 agttatggtgcataaggaaatccttatgcac 50755205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 3475301 - 3475330
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  3475301 gttatggtgcataaggaaatccttatgcac 3475330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 6097578 - 6097607
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  6097578 gttatggtgcataaggaaatccttatgcac 6097607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 8036802 - 8036831
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  8036802 gttatggtgcataaggaaatccttatgcac 8036831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 8719179 - 8719150
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  8719179 gttatggtgcataaggaaatccttatgcac 8719150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 9071066 - 9071037
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  9071066 gttatggtgcataaggaaatccttatgcac 9071037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 9106439 - 9106410
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  9106439 gttatggtgcataaggaaatccttatgcac 9106410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 9595874 - 9595903
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  9595874 gttatggtgcataaggaaatccttatgcac 9595903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 10986524 - 10986495
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  10986524 gttatggtgcataaggaaatccttatgcac 10986495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 12974014 - 12974043
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  12974014 gttatggtgcataaggaaatccttatgcac 12974043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 12974232 - 12974203
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  12974232 gttatggtgcataaggaaatccttatgcac 12974203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 17620738 - 17620767
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  17620738 gttatggtgcataaggaaatccttatgcac 17620767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 19284843 - 19284814
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  19284843 gttatggtgcataaggaaatccttatgcac 19284814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 23638227 - 23638150
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattatt 188  Q
    |||||||||||||||||||||||   |||||||||  |||| || ||||||| |||  ||||||||| ||| ||||||    
T  23638227 gtttgtctaacatgtgcaatattgtgcatgttaagttaacttaaagtagtaactttctattgaaaaacatcaattatt 23638150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 27068534 - 27068563
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  27068534 gttatggtgcataaggaaatccttatgcac 27068563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 30947805 - 30947834
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  30947805 gttatggtgcataaggaaatccttatgcac 30947834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 34562401 - 34562430
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  34562401 gttatggtgcataaggaaatccttatgcac 34562430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 36185947 - 36185918
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  36185947 gttatggtgcataaggaaatccttatgcac 36185918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 50416482 - 50416511
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  50416482 gttatggtgcataaggaaatccttatgcac 50416511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 50416606 - 50416577
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  50416606 gttatggtgcataaggaaatccttatgcac 50416577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 51361525 - 51361554
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  51361525 gttatggtgcataaggaaatccttatgcac 51361554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 51618050 - 51618083
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaa 144  Q
    ||||||||||||||||||||||| ||||||||||    
T  51618050 gtttgtctaacatgtgcaatattgcacatgttaa 51618083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 54379334 - 54379305
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  54379334 gttatggtgcataaggaaatccttatgcac 54379305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 2941821 - 2941849
Alignment:
Q  224 ttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||    
T  2941821 ttatggtgcataaggaaatccttatgcac 2941849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 15863085 - 15863017
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||| ||||||||||||||||||| |||||||||  | || |||| |||| || ||| ||||||||||    
T  15863085 gagttcgtctaacatgtgcaatattgcacatgttacaggaattaaaagtagcaactttacattgaaaaa 15863017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 26291197 - 26291229
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaa 144  Q
    |||||| ||||||||||||||||||||||||||    
T  26291197 tttgtcaaacatgtgcaatattacacatgttaa 26291229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 28992957 - 28992886
Alignment:
Q  111 gtttgtctaacatgtgca--atattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatat 180  Q
    ||||||||||||||||||  ||||| ||||||||||   || |||| ||||||| |||||||| ||||||||    
T  28992957 gtttgtctaacatgtgcaatatattgcacatgttaaaacaattaaaagtagtaacttttcattaaaaaatat 28992886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 36185728 - 36185756
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  36185728 gttatggtgcataaggaaatccttatgca 36185756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 46492519 - 46492455
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    |||| ||| |||||||||||| |||||||||| | ||||||| || |||| |||| |||||||||    
T  46492519 ttgtttaaaatgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaa 46492455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 50204403 - 50204459
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    ||||||||||||||||||| ||| ||||||||||   ||||||  ||||||||||||    
T  50204403 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttt 50204459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 33346436 - 33346350
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||| |||||||||  ||||||||||||||    
T  33346436 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgt--acacgtgtaataat 33346350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 29157226 - 29157312
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    ||||||||||||  |||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  29157226 ggcaaaagttatcatgcacaaggaaatccttatgcaccgtgcataaacactttacaaccatcagatctagtgt--acacgtgtaataat 29157312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 34399641 - 34399737
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||||||||||||||||||||||||||||||||  |  | |||||||| |||| |||||||||||||||  ||||||||||||||| || |||||    
T  34399641 ggcaaaagttatggtgcataaggaaatccttatgcaccgtatataaacacttcacaatcatcagatctagtgt--acacgtgtaataatcctaggcttc 34399737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 5363070 - 5363005
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  5363070 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 5363005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 26602608 - 26602543
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||    
T  26602608 gtttgtctaacatgtgcaatattgcacatattaaggaaactaaaagtagtaatttttcactgaaaa 26602543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 12454064 - 12454131
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||    
T  12454064 gagtttgtgtaacatgtgcaatattgcacatgttaagaaaattaaatgtagtaattttttattgaaaa 12454131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 15035040 - 15034965
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 291  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||   || |||||||||||||||||||||||    
T  15035040 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaatcattcacaaccatcagatctagtgtaca 15034965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 31791094 - 31791027
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgtt-aaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||    
T  31791094 gtttgtctaacatgtgcaatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaaaa 31791027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 8977644 - 8977578
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||| ||  ||| |||||||||    
T  8977644 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaa 8977578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 35119239 - 35119310
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 291  Q
    ||||||||||||||||||||||    |||||||||||  |||| |||||||| |||||||||||||||||||||||    
T  35119239 ggcaaaagttatggtgcataag----tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 35119310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 2830857 - 2830793
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||||| || |||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  2830857 tttgtctaacatgtacagtattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 2830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 12394442 - 12394387
Alignment:
Q  219 aaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaacc 274  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  12394442 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 18332866 - 18332800
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||    
T  18332866 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaa 18332800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 18611218 - 18611285
Alignment:
Q  245 ttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  18611218 ttatgcactctgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcataggcttc 18611285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 29863480 - 29863414
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||||||| |||||||||| | |||||||  |||||| ||| ||||||||||    
T  29863480 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaa 29863414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 17552769 - 17552716
Alignment:
Q  106 ttagagtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtag 159  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  17552769 ttagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtag 17552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 10887031 - 10887095
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||    
T  10887031 ttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaa 10887095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 14228303 - 14228239
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| || |||| |||| || |||| |||||||    
T  14228303 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaa 14228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 28943946 - 28943882
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| || |||| |||| || |||| |||||||    
T  28943946 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaa 28943882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 33017725 - 33017768
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  33017725 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaa 33017768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 6016856 - 6016922
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||| ||||  | ||||| ||||||| ||||||||||||||    
T  6016856 gtttgtctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaa 6016922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 17596315 - 17596369
Alignment:
Q  113 ttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    ||||||||||||||||||||| |||||||||||  ||||||| ||||||| ||||    
T  17596315 ttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaactttt 17596369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 2086998 - 2086949
Alignment:
Q  126 gcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 175  Q
    |||||||| |||||||||||| || |||| ||||||||||||||||||||    
T  2086998 gcaatattgcacatgttaaggtaattaaaagtagtaatttttcattgaaa 2086949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 2759826 - 2759859
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatg 249  Q
    ||||||||||||||||||||||||||||||||||    
T  2759826 ggcaaaagttatggtgcataaggaaatccttatg 2759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 24737726 - 24737660
Alignment:
Q  246 tatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 314  Q
    |||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 24737660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 10345714 - 10345674
Alignment:
Q  114 tgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  10345714 tgtctaacatgtgcaatattgcacatgttaaagaaactaaa 10345674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 1814959 - 1814916
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaa 154  Q
    ||||||||||||||||||||||| |||||||||| | |||||||    
T  1814959 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaa 1814916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 22974731 - 22974685
Alignment:
Q  130 tattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 22974685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 23813670 - 23813716
Alignment:
Q  130 tattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 23813716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 30623326 - 30623392
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||||||||||||||   ||||||  ||||||| ||||  ||||||||    
T  30623326 gtttgtctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaa 30623392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 6900975 - 6900946
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  6900975 gttatggtgcataaggaaatccttatgcac 6900946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 7765446 - 7765417
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  7765446 gttatggtgcataaggaaatccttatgcac 7765417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 10588995 - 10588966
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  10588995 gttatggtgcataaggaaatccttatgcac 10588966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 14237780 - 14237809
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  14237780 gttatggtgcataaggaaatccttatgcac 14237809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 15493346 - 15493317
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  15493346 gttatggtgcataaggaaatccttatgcac 15493317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 18755665 - 18755694
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  18755665 gttatggtgcataaggaaatccttatgcac 18755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 19284373 - 19284402
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  19284373 gttatggtgcataaggaaatccttatgcac 19284402  T

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Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 20522890 - 20522861
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  20522890 gttatggtgcataaggaaatccttatgcac 20522861  T

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Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 21385031 - 21385002
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  21385031 gttatggtgcataaggaaatccttatgcac 21385002  T

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Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 22857490 - 22857519
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  22857490 gttatggtgcataaggaaatccttatgcac 22857519  T

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Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 34869957 - 34869986
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  34869957 gttatggtgcataaggaaatccttatgcac 34869986  T

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Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 2087031 - 2086999
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgtta 143  Q
    ||||||||||||||||||||||| |||||||||    
T  2087031 gtttgtctaacatgtgcaatattgcacatgtta 2086999  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 25119512 - 25119484
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  25119512 gttatggtgcataaggaaatccttatgca 25119484  T

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Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 31169940 - 31169876
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||| |||||||  || ||||||||||||  ||||||  |||||||||||| |||||||    
T  31169940 tttgtctaacctgtgcaaacttgcacatgttaaggctactaaaaatagtaatttttctttgaaaa 31169876  T

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Target: scaffold0544 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 10739 - 10668
Alignment:
Q  217 gcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgt 288  Q
    |||||||||||||||||||||||||||||||| |||  |||| |||||||| ||||||||||||||||||||    
T  10739 gcaaaagttatggtgcataaggaaatccttatacaccgtgcataaacacttcacaaccatcagatctagtgt 10668  T

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Target: scaffold0061 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 52956 - 52891
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  52956 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 52891  T

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Target: scaffold0017 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 145678 - 145743
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  145678 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 145743  T

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Target: scaffold0011 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 13086 - 13151
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||    
T  13086 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaa 13151  T

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Target: scaffold0337 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 7020 - 7104
Alignment:
Q  219 aaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 305  Q
    |||||||||||||||||| |||||| |||| |||  |||| |||||||| |||||||||||||||||||||||||  ||||||||||    
T  7020 aaaagttatggtgcataacgaaatctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacaca--tgtaataatc 7104  T

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Target: scaffold0189 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 11255 - 11193
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatca 278  Q
    |||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||    
T  11255 ggcaaaagttatggtgcataaggaaatccttatgcactgtgcataagcacttcacaaccatca 11193  T

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Target: scaffold0194 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 27607 - 27693
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 304  Q
    ||||||||||||||||||||||||||  |||||| ||  |||| |||||||| ||||| || |||||||||||  ||||||||||||||    
T  27607 ggcaaaagttatggtgcataaggaaaaacttatgtaccgtgcataaacacttcacaactataagatctagtgt--acacgtgtaataat 27693  T

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Target: scaffold0727 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 5692 - 5747
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaattttt 167  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  5692 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaattttt 5747  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 37292 - 37226
Alignment:
Q  111 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 177  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||| |||||||||||| |||||||||    
T  37292 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaa 37226  T

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Target: scaffold0338 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 6556 - 6520
Alignment:
Q  222 agttatggtgcataaggaaatccttatgcactatgca 258  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6556 agttatggtgcataaggaaatccttatgcaccatgca 6520  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 27306 - 27342
Alignment:
Q  108 agagtttgtctaacatgtgcaatattacacatgttaa 144  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27306 agagtttgtctaacatgttcaatattacacatgttaa 27342  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 193412 - 193376
Alignment:
Q  109 gagtttgtctaacatgtgcaatattacacatgttaag 145  Q
    ||||||||||||||||||||||||| |||||||||||    
T  193412 gagtttgtctaacatgtgcaatattgcacatgttaag 193376  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 43462 - 43528
Alignment:
Q  111 gtttgtctaacatgtg--caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||| |||||||||||  ||||||| ||| |||||||| || |||| |||||||||||||||||||||    
T  43462 gtttctctaacatgtgagcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaa 43528  T

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Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 51908 - 51936
Alignment:
Q  224 ttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||    
T  51908 ttatggtgcataaggaaatccttatgcac 51936  T

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Target: scaffold0581 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 8487 - 8421
Alignment:
Q  216 ggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagat 281  Q
    ||||||||||||||||||||||  | | ||||||||||| |||| |||||| | |||||||||||||    
T  8487 ggcaaaagttatggtgcataagccatttccttatgcactgtgcataaacacatcacaaccatcagat 8421  T

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Target: scaffold0571 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 547 - 576
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  547 gttatggtgcataaggaaatccttatgcac 576  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 1290 - 1261
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  1290 gttatggtgcataaggaaatccttatgcac 1261  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 23546 - 23575
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  23546 gttatggtgcataaggaaatccttatgcac 23575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 23776 - 23748
Alignment:
Q  224 ttatggtgcataaggaaatccttatgcac 252  Q
    |||||||||||||||||||||||||||||    
T  23776 ttatggtgcataaggaaatccttatgcac 23748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 20162 - 20133
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  20162 gttatggtgcataaggaaatccttatgcac 20133  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 33618 - 33647
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  33618 gttatggtgcataaggaaatccttatgcac 33647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 24446 - 24417
Alignment:
Q  223 gttatggtgcataaggaaatccttatgcac 252  Q
    ||||||||||||||||||||||||||||||    
T  24446 gttatggtgcataaggaaatccttatgcac 24417  T

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Target: scaffold1450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1450
Description:

Target: scaffold1450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 752 - 780
Alignment:
Q  223 gttatggtgcataaggaaatccttatgca 251  Q
    |||||||||||||||||||||||||||||    
T  752 gttatggtgcataaggaaatccttatgca 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 94195 - 94131
Alignment:
Q  112 tttgtctaacatgtgcaatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 176  Q
    |||||||||||| ||||| ||| ||||||||||   ||||||| ||||||| |||| ||||||||    
T  94195 tttgtctaacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaa 94131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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