View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3879_low_24 (Length: 374)

Name: NF3879_low_24
Description: NF3879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3879_low_24
NF3879_low_24
[»] chr8 (28 HSPs)
chr8 (116-356)||(14747493-14747739)
chr8 (1-83)||(41681130-41681212)
chr8 (1-81)||(11656453-11656533)
chr8 (1-81)||(12571861-12571941)
chr8 (1-80)||(13225106-13225185)
chr8 (1-79)||(41681601-41681679)
chr8 (4-85)||(9930127-9930208)
chr8 (1-81)||(19176288-19176368)
chr8 (1-81)||(19176757-19176837)
chr8 (1-76)||(9928912-9928987)
chr8 (1-76)||(12572318-12572393)
chr8 (1-76)||(33328161-33328236)
chr8 (1-79)||(9178102-9178180)
chr8 (1-78)||(31133687-31133764)
chr8 (5-81)||(33742920-33742996)
chr8 (1-80)||(44831246-44831325)
chr8 (4-85)||(11656927-11657008)
chr8 (4-81)||(34541018-34541095)
chr8 (1-81)||(44831712-44831792)
chr8 (3-82)||(31133217-31133296)
chr8 (3-75)||(13224645-13224716)
chr8 (28-81)||(10918124-10918177)
chr8 (1-81)||(11336989-11337069)
chr8 (1-77)||(33328607-33328683)
chr8 (1-81)||(4629795-4629875)
chr8 (4-80)||(8074021-8074097)
chr8 (15-80)||(599531-599597)
chr8 (15-80)||(7910615-7910681)
[»] chr6 (31 HSPs)
chr6 (1-81)||(2319670-2319750)
chr6 (1-79)||(10900397-10900475)
chr6 (1-83)||(23075595-23075677)
chr6 (1-80)||(15828108-15828187)
chr6 (1-81)||(12935155-12935235)
chr6 (1-81)||(22219820-22219900)
chr6 (1-83)||(18257133-18257215)
chr6 (4-81)||(20741098-20741175)
chr6 (1-81)||(11445454-11445534)
chr6 (4-83)||(1149461-1149540)
chr6 (1-80)||(23073998-23074077)
chr6 (1-79)||(4811372-4811450)
chr6 (1-79)||(11277049-11277127)
chr6 (3-80)||(31470314-31470391)
chr6 (1-85)||(20741571-20741655)
chr6 (1-76)||(10899942-10900017)
chr6 (1-84)||(12935624-12935707)
chr6 (1-76)||(18504922-18504997)
chr6 (1-79)||(1149899-1149977)
chr6 (1-79)||(18257604-18257682)
chr6 (3-77)||(29033436-29033510)
chr6 (4-80)||(11276589-11276665)
chr6 (1-76)||(2322685-2322760)
chr6 (3-78)||(18505388-18505463)
chr6 (4-81)||(11444985-11445062)
chr6 (4-81)||(28472635-28472712)
chr6 (4-77)||(29035107-29035180)
chr6 (4-81)||(29859824-29859901)
chr6 (1-78)||(31470783-31470860)
chr6 (1-79)||(4811723-4811801)
chr6 (5-78)||(15827639-15827712)
[»] chr2 (38 HSPs)
chr2 (1-82)||(11090987-11091068)
chr2 (1-82)||(22374317-22374398)
chr2 (1-85)||(28847162-28847246)
chr2 (1-81)||(1978106-1978186)
chr2 (1-80)||(40027139-40027218)
chr2 (1-79)||(28616613-28616691)
chr2 (1-81)||(20440498-20440578)
chr2 (1-81)||(22374792-22374872)
chr2 (1-81)||(26538546-26538626)
chr2 (1-81)||(40815812-40815892)
chr2 (1-80)||(18450829-18450908)
chr2 (1-80)||(20444748-20444827)
chr2 (1-82)||(11090518-11090599)
chr2 (4-81)||(18451301-18451378)
chr2 (3-83)||(1978578-1978658)
chr2 (1-73)||(3025472-3025544)
chr2 (1-81)||(7446813-7446893)
chr2 (3-83)||(35781132-35781212)
chr2 (1-85)||(40027607-40027691)
chr2 (1-77)||(40815347-40815423)
chr2 (1-80)||(7446341-7446420)
chr2 (4-77)||(14432611-14432684)
chr2 (4-81)||(43058802-43058879)
chr2 (1-81)||(239351-239430)
chr2 (4-80)||(28617084-28617160)
chr2 (1-76)||(8425358-8425433)
chr2 (5-80)||(26538096-26538171)
chr2 (4-78)||(239822-239896)
chr2 (4-77)||(15551501-15551574)
chr2 (1-76)||(14432145-14432220)
chr2 (1-79)||(43058333-43058411)
chr2 (3-76)||(8425829-8425902)
chr2 (4-77)||(8972239-8972312)
chr2 (4-85)||(35779702-35779783)
chr2 (18-80)||(44220130-44220192)
chr2 (15-81)||(43160007-43160074)
chr2 (1-79)||(3025930-3026006)
chr2 (15-84)||(4355750-4355820)
[»] chr1 (35 HSPs)
chr1 (1-82)||(18984116-18984197)
chr1 (1-80)||(15646662-15646741)
chr1 (4-81)||(15646190-15646267)
chr1 (1-82)||(17433682-17433763)
chr1 (1-77)||(21856044-21856120)
chr1 (1-80)||(29869619-29869698)
chr1 (1-80)||(50970745-50970824)
chr1 (1-79)||(29306953-29307031)
chr1 (1-78)||(5539817-5539894)
chr1 (1-78)||(5962579-5962656)
chr1 (1-78)||(8678542-8678619)
chr1 (4-77)||(33144389-33144462)
chr1 (1-82)||(50970275-50970356)
chr1 (3-80)||(52268289-52268366)
chr1 (2-78)||(4636439-4636515)
chr1 (1-81)||(9018971-9019051)
chr1 (1-80)||(5540285-5540364)
chr1 (4-79)||(8679011-8679086)
chr1 (1-80)||(18984586-18984665)
chr1 (1-79)||(29307409-29307487)
chr1 (1-79)||(29870086-29870164)
chr1 (1-71)||(33143925-33143995)
chr1 (3-76)||(5963047-5963120)
chr1 (4-77)||(47826966-47827039)
chr1 (1-85)||(26859526-26859610)
chr1 (4-80)||(39154490-39154566)
chr1 (4-82)||(15173564-15173641)
chr1 (1-79)||(17433216-17433294)
chr1 (1-79)||(21856510-21856588)
chr1 (1-79)||(26859059-26859137)
chr1 (1-83)||(39154015-39154097)
chr1 (1-81)||(9019430-9019510)
chr1 (1-76)||(15173099-15173174)
chr1 (1-81)||(2733424-2733504)
chr1 (4-52)||(47827058-47827106)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-81)||(4791-4871)
scaffold0295 (1-77)||(5258-5334)
[»] chr5 (36 HSPs)
chr5 (1-84)||(19359603-19359686)
chr5 (1-82)||(2865222-2865303)
chr5 (1-85)||(8460924-8461008)
chr5 (1-81)||(18183436-18183516)
chr5 (1-81)||(24331557-24331637)
chr5 (1-81)||(24362303-24362383)
chr5 (1-79)||(5819396-5819474)
chr5 (1-82)||(5818926-5819007)
chr5 (1-82)||(18182967-18183048)
chr5 (1-81)||(8647905-8647985)
chr5 (1-81)||(15372340-15372420)
chr5 (1-81)||(15708969-15709049)
chr5 (4-80)||(29455212-29455288)
chr5 (4-78)||(6018315-6018389)
chr5 (4-77)||(14215243-14215316)
chr5 (4-84)||(4222192-4222272)
chr5 (3-79)||(7348559-7348635)
chr5 (1-81)||(14215710-14215790)
chr5 (1-80)||(8461398-8461477)
chr5 (4-79)||(8647438-8647513)
chr5 (1-79)||(19359136-19359214)
chr5 (3-79)||(7349486-7349562)
chr5 (1-80)||(29454739-29454818)
chr5 (1-79)||(164191-164269)
chr5 (4-77)||(15371873-15371945)
chr5 (1-77)||(2864756-2864832)
chr5 (1-80)||(16018588-16018667)
chr5 (1-81)||(164658-164738)
chr5 (4-80)||(25000559-25000635)
chr5 (2-81)||(14463988-14464067)
chr5 (1-79)||(15709436-15709513)
chr5 (177-296)||(27056412-27056531)
chr5 (5-79)||(4219663-4219737)
chr5 (3-73)||(6019240-6019309)
chr5 (4-73)||(24325218-24325287)
chr5 (4-73)||(24361843-24361912)
[»] chr4 (48 HSPs)
chr4 (1-84)||(15523230-15523313)
chr4 (1-81)||(20470978-20471058)
chr4 (1-81)||(23494910-23494990)
chr4 (1-81)||(25937668-25937748)
chr4 (1-84)||(38962286-38962369)
chr4 (1-79)||(45082891-45082969)
chr4 (1-81)||(25447703-25447783)
chr4 (1-89)||(54995059-54995147)
chr4 (1-76)||(48526648-48526723)
chr4 (1-79)||(12234796-12234874)
chr4 (1-79)||(22434179-22434257)
chr4 (1-79)||(25447247-25447325)
chr4 (2-79)||(11153615-11153692)
chr4 (4-77)||(18763990-18764063)
chr4 (5-78)||(20958330-20958403)
chr4 (5-77)||(23494445-23494517)
chr4 (1-77)||(33109686-33109762)
chr4 (1-77)||(46193872-46193948)
chr4 (1-81)||(54995534-54995614)
chr4 (1-76)||(18751602-18751677)
chr4 (4-79)||(46193405-46193480)
chr4 (3-85)||(25938140-25938222)
chr4 (1-82)||(51021262-51021343)
chr4 (1-81)||(12234327-12234407)
chr4 (4-80)||(15523704-15523780)
chr4 (1-81)||(22434644-22434723)
chr4 (3-77)||(4219559-4219633)
chr4 (4-81)||(4220029-4220106)
chr4 (1-82)||(33109931-33110012)
chr4 (4-61)||(43243750-43243807)
chr4 (1-80)||(11153145-11153224)
chr4 (9-80)||(16318251-16318322)
chr4 (4-78)||(44890518-44890592)
chr4 (4-77)||(2118295-2118368)
chr4 (4-61)||(43281260-43281317)
chr4 (4-85)||(48295013-48295094)
chr4 (1-85)||(2118762-2118846)
chr4 (4-72)||(20957196-20957264)
chr4 (3-78)||(44892617-44892692)
chr4 (1-80)||(48526195-48526274)
chr4 (10-80)||(10258363-10258433)
chr4 (4-76)||(16690939-16691011)
chr4 (1-81)||(45082430-45082509)
chr4 (15-81)||(34807114-34807181)
chr4 (2-81)||(51020795-51020874)
chr4 (29-79)||(35363096-35363146)
chr4 (4-82)||(48713816-48713894)
chr4 (34-83)||(48293590-48293639)
[»] chr3 (46 HSPs)
chr3 (1-83)||(4275831-4275913)
chr3 (1-82)||(31779119-31779200)
chr3 (1-81)||(29801883-29801963)
chr3 (1-80)||(31778652-31778731)
chr3 (1-79)||(32535430-32535508)
chr3 (1-81)||(17464489-17464569)
chr3 (1-81)||(43973907-43973987)
chr3 (1-76)||(26274570-26274645)
chr3 (4-79)||(39556047-39556122)
chr3 (1-79)||(23644932-23645010)
chr3 (1-79)||(25853234-25853312)
chr3 (1-82)||(5136977-5137058)
chr3 (3-80)||(23644461-23644538)
chr3 (1-81)||(20840558-20840638)
chr3 (4-80)||(39555577-39555653)
chr3 (1-80)||(17464959-17465038)
chr3 (1-80)||(20841028-20841107)
chr3 (1-76)||(41046703-41046778)
chr3 (1-79)||(37727397-37727475)
chr3 (4-78)||(51473429-51473503)
chr3 (1-81)||(24301023-24301103)
chr3 (4-80)||(30098233-30098309)
chr3 (1-81)||(48452987-48453067)
chr3 (1-80)||(27393660-27393739)
chr3 (1-80)||(37726928-37727007)
chr3 (1-75)||(22425280-22425354)
chr3 (2-80)||(27394045-27394123)
chr3 (1-79)||(29801356-29801434)
chr3 (3-85)||(37222040-37222122)
chr3 (1-79)||(43973441-43973519)
chr3 (4-81)||(5137451-5137528)
chr3 (1-82)||(26837357-26837438)
chr3 (1-76)||(32534962-32535037)
chr3 (4-82)||(25853697-25853775)
chr3 (4-78)||(32697170-32697244)
chr3 (3-76)||(25612446-25612519)
chr3 (12-81)||(30104480-30104549)
chr3 (4-81)||(51474804-51474881)
chr3 (1-45)||(26275033-26275077)
chr3 (1-81)||(26837823-26837902)
chr3 (4-79)||(23228478-23228552)
chr3 (4-83)||(37220553-37220632)
chr3 (1-79)||(50116876-50116954)
chr3 (1-81)||(22424812-22424892)
chr3 (4-76)||(32695706-32695778)
chr3 (1-76)||(24300560-24300634)
[»] chr7 (28 HSPs)
chr7 (1-85)||(19590519-19590603)
chr7 (4-81)||(2658837-2658914)
chr7 (1-82)||(19830417-19830498)
chr7 (1-82)||(35289368-35289449)
chr7 (1-81)||(19590992-19591072)
chr7 (1-81)||(38859108-38859188)
chr7 (4-83)||(34533787-34533866)
chr7 (4-79)||(35288903-35288978)
chr7 (1-85)||(37786761-37786845)
chr7 (1-76)||(29100318-29100393)
chr7 (4-83)||(32004610-32004689)
chr7 (1-79)||(32005081-32005159)
chr7 (1-81)||(23952728-23952809)
chr7 (1-82)||(23953196-23953276)
chr7 (1-81)||(2659307-2659387)
chr7 (1-81)||(37787234-37787314)
chr7 (1-85)||(38858637-38858721)
chr7 (1-80)||(19830886-19830965)
chr7 (1-67)||(29099862-29099928)
chr7 (4-84)||(28584392-28584472)
chr7 (1-81)||(34534258-34534338)
chr7 (9-82)||(4478175-4478248)
chr7 (4-81)||(38160949-38161026)
chr7 (1-76)||(4641443-4641518)
chr7 (1-76)||(4641911-4641983)
chr7 (15-81)||(7732486-7732553)
chr7 (3-82)||(28583436-28583515)
chr7 (48-89)||(49064024-49064065)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-81)||(2134-2214)
scaffold0951 (4-83)||(1663-1742)
[»] scaffold0432 (2 HSPs)
scaffold0432 (1-76)||(10339-10414)
scaffold0432 (4-76)||(9935-10007)
[»] scaffold0019 (1 HSPs)
scaffold0019 (2-81)||(134141-134220)
[»] scaffold1223 (2 HSPs)
scaffold1223 (1-79)||(1208-1286)
scaffold1223 (1-82)||(750-831)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-79)||(19088-19166)
scaffold0176 (1-85)||(18829-18913)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-81)||(4674-4754)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-80)||(28710-28789)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-79)||(11090-11168)
scaffold0417 (1-60)||(10640-10699)
[»] scaffold0057 (2 HSPs)
scaffold0057 (4-76)||(61928-62000)
scaffold0057 (5-84)||(61023-61102)
[»] scaffold1585 (1 HSPs)
scaffold1585 (3-78)||(568-643)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-76)||(64772-64847)
scaffold0007 (1-80)||(64301-64380)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-81)||(42625-42705)
scaffold0027 (1-76)||(42172-42247)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-76)||(8476-8551)


Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 116 - 356
Target Start/End: Complemental strand, 14747739 - 14747493
Alignment:
Q  116 tgtaaagcaggattgctatatccgcctttgtaccatgtgccaattgggtcttaggcacaatatcaacattaagaacctgctctcgtgtctgatcatttgg 215  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  14747739 tgtagagcaggattgctatatccacctttgtaccatgtgccaattgggtcttaggctcaatatcaacattaagaacctgctcttgtgtctgatcatttgg 14747640  T
Q  216 aactagtacctcaacgtgctctgaatactcatgttcttcaacaagtttcaaaactggctttggggatgtagggagactgtttgcaggcaatttattat-- 313  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  14747639 aactagtacctcaacgtgctctgaatactcatgtttttcaacaagtttcaaaactggctttggggatgtagggagactgtttgcaggcaatttattatta 14747540  T
Q  314 ----tattctgttgccttttattcattttttaaaatcaaacacaaca 356  Q
        |||||||||||||||||||||||||| ||||||||||||||||    
T  14747539 ttattattctgttgccttttattcatttttaaaaatcaaacacaaca 14747493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 41681212 - 41681130
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||    
T  41681212 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctata 41681130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11656533 - 11656453
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  11656533 ccgttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12571941 - 12571861
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  12571941 ccgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 12571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13225106 - 13225185
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  13225106 ccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41681601 - 41681679
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||| |||| ||||||||||||    
T  41681601 ccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 9930127 - 9930208
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    ||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||    
T  9930127 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctttatt 9930208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19176368 - 19176288
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | ||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  19176368 ccgttttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19176288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19176757 - 19176837
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||| ||||||||| |||||| |||||||| |||| ||||||||||||||    
T  19176757 ccgttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9928987 - 9928912
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||||| |||| |||||||||    
T  9928987 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12572318 - 12572393
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||||| |||| |||||||||    
T  12572318 ccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33328236 - 33328161
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||||||| |||| |||||||||    
T  33328236 ccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9178102 - 9178180
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  9178102 ccgttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31133687 - 31133764
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||||||||||||||||||||| | || ||||||||||||||| |||||| |||||||| |||| |||||||||||    
T  31133687 ccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 33742996 - 33742920
Alignment:
Q  5 tttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||| | ||||||||||||||||||  ||||| |||||||| |||| ||||||||||||||    
T  33742996 tttgttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 33742920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44831325 - 44831246
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| |||||| | |||||| |||| |||||||||||||    
T  44831325 ccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 11656927 - 11657008
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    ||||||||||||||||||||    |||||||||||||||||| |||||| |||||||| |||| ||||||||||||| ||||    
T  11656927 ttttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctttatt 11657008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 34541018 - 34541095
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||| ||||||||||| | | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  34541018 ttttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34541095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44831712 - 44831792
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||| | | |||||||||||||||||  |||||| |||||||| |||| ||| ||||||||||    
T  44831712 ccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 44831792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 31133296 - 31133217
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||| |||||||||||||   ||||||||||||||||||  ||||| |||||||| |||| |||||||||||||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcctat 31133217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 13224716 - 13224645
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaatta 75  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||| |||| ||| |||| ||||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 10918177 - 10918124
Alignment:
Q  28 gaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  10918177 gaccaatttcgtgagtagatcaaaacacgaggacaaaaaatgtaattaaaccta 10918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11336989 - 11337069
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||| ||||||||||||||||   ||||| |||||||||||  |||||| |||| ||| |||| ||||||||||||||    
T  11336989 ccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgtaattaagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33328607 - 33328683
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||| ||||||||||| | ||||| |||||||||||||| | |||| |||||||| |||| | ||||||||    
T  33328607 ccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4629875 - 4629795
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||| ||||||||||| | |||||||||||||| ||  |||||| ||||| |  |||| || |||||||||||    
T  4629875 ccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 8074021 - 8074097
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||||  |||| || |||||||| ||| |||||| |||||||| |||| | ||| |||||||    
T  8074021 ttttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaagtataactaagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 599597 - 599531
Alignment:
Q  15 tttaaaag-ggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||| |||||||||| |||||||||| |  |||||| | ||||| ||||||||||||||||||    
T  599597 tttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcct 599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 7910681 - 7910615
Alignment:
Q  15 tttaaaag-ggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||| ||||| |||| |||||||||| || ||||||  |||||| ||||||||||||||||||    
T  7910681 tttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaagcct 7910615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2319750 - 2319670
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  2319750 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccta 2319670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10900397 - 10900475
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  10900397 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23075595 - 23075677
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||    
T  23075595 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctata 23075677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15828108 - 15828187
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  15828108 ccgttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12935235 - 12935155
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  12935235 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 12935155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22219820 - 22219900
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  22219820 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22219900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18257215 - 18257133
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||||||||||||||||||||||| | |||||||||||||||||  |||||| |||||||| |||| ||||||||||||||||    
T  18257215 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcctata 18257133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 20741175 - 20741098
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  20741175 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11445454 - 11445534
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||| || | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  11445454 ccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11445534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 1149540 - 1149461
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||  |||| ||||||||||||||||    
T  1149540 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctata 1149461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23074077 - 23073998
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||| ||||||||||| | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  23074077 ccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4811450 - 4811372
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||  |||| |||| ||||||||||||    
T  4811450 ccgttttattctattttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11277049 - 11277127
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | |||||||||||||||||  |||||| |||||||| |||| ||||||||||||    
T  11277049 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 31470391 - 31470314
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||  |||| |||||||||||||    
T  31470391 gttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20741571 - 20741655
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||||||||||||||||| | || ||||||||||||||| |||||| |||||||| || | ||||||||||||| ||||    
T  20741571 ccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcctttatt 20741655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10900017 - 10899942
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||| ||| |||| |||||||||    
T  10900017 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12935624 - 12935707
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatat 84  Q
    |||||||||||||||||| || || | |||||||||||||||||  |||||| |||||||| |||| |||||||||||||||||    
T  12935624 ccgttttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagcctatat 12935707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18504997 - 18504922
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||||||||||||||||| || | |||||||||||||||||| |||||| |||||||| |||| |||||||||    
T  18504997 ccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1149899 - 1149977
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||| | |||| |||||||| |||| ||||||||||||    
T  1149899 ccgttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18257604 - 18257682
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||||| |||| | ||||||||||    
T  18257604 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 29033510 - 29033436
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||||||||||||||| | ||||| ||||||||| || ||||||||||||||| |||| ||||||||||    
T  29033510 gttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 11276665 - 11276589
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||| ||| |||| |||  |||||||||||||    
T  11276665 ttttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2322685 - 2322760
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||||||||||||||||| || | ||| ||||||||||||||||||||| |||| ||| |||| |||||||||    
T  2322685 ccgttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 18505388 - 18505463
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||||| ||||||||||||| | || |||||||||||||||||||||| |||||||| |||| | |||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 11445062 - 11444985
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||| |||||||||||| ||| | |||||| ||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  11445062 ttttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 28472712 - 28472635
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||| || | ||||| |||||||||| | |||||| |||||||| |||| ||||||||||||||    
T  28472712 ttttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 28472635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 29035107 - 29035180
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    ||||||||||||||||||||| || |||| |||||||||||| | |||| |||||||| |||| ||||||||||    
T  29035107 ttttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 29859901 - 29859824
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||| || | ||||| |||||||||| | |||||| |||||||| |||| ||||||||||||||    
T  29859901 ttttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 29859824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31470783 - 31470860
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||||||||||||||||||||| |  ||||||||||||||||| | |||| || ||||| |||| |||||||||||    
T  31470783 ccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4811723 - 4811801
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||  | |||| ||||||| ||||||| |||||| |||||||  |||| | ||||||||||    
T  4811723 ccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 15827712 - 15827639
Alignment:
Q  5 tttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||| ||||||||||||  |  ||||||||||||||||  |||||| |||||||| |||| |||||||||||    
T  15827712 tttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11090987 - 11091068
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||    
T  11090987 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 11091068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22374398 - 22374317
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||    
T  22374398 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 22374317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28847162 - 28847246
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||| ||||||||||| | | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  28847162 ccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaaatgtaattaagcctatatt 28847246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1978186 - 1978106
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| || ||||| |||||||||||||||||||    
T  1978186 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 40027218 - 40027139
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| ||| |||| |||||||||||||    
T  40027218 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 28616691 - 28616613
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  28616691 ccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20440498 - 20440578
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||| | |||||| |||||||| |||| ||||||||||||||    
T  20440498 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 20440578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22374792 - 22374872
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  22374792 ccgttttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26538546 - 26538626
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||| |||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  26538546 ccgttttgttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 26538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40815812 - 40815892
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| || ||||||||||||||||| |||||| |||||||| |||| ||||||||| ||||    
T  40815812 ccgttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 40815892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18450908 - 18450829
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||||||||   |||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  18450908 ccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20444827 - 20444748
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| | |||||||||||||||| | |||||| |||||||| |||| |||||||||||||    
T  20444827 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11090599 - 11090518
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| | ||| |||||||||||||| |||||| |||||||| |||| ||||||||| |||||    
T  11090599 ccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctat 11090518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 18451301 - 18451378
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||| | |||||||||||| ||||| |||||| |||||||| |||| ||||||||||||||    
T  18451301 ttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18451378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 1978578 - 1978658
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||||||||||||||||||||| | ||||| |||||||||||| |||||| || ||||| |||| ||||||||||||||||    
T  1978578 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcctata 1978658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3025544 - 3025472
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaat 73  Q
    |||||||||||||||||||||| | | |||||||||||||||||| |||||| |||||||| |||||||||||    
T  3025544 ccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7446813 - 7446893
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||   ||||| |||||||  |||||||||||||||||||    
T  7446813 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagccta 7446893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 35781132 - 35781212
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||  |||| ||||||||||| ||||    
T  35781132 gttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcttata 35781212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40027607 - 40027691
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| |||||| |||||||| |||| ||||||||| ||| ||||    
T  40027607 ccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctttatt 40027691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40815423 - 40815347
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||| ||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||    
T  40815423 ccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7446420 - 7446341
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| | ||||| |||| |||||||||||||| |||||||  |||| |||||||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 14432611 - 14432684
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||| ||||||||||||| || |||||||||||| ||||||| |||||| |||||||| |||||||||||||||    
T  14432611 ttttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 43058802 - 43058879
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||| | | |||||||||||||||||| |||||| |||||||  |||| ||||||||||||||    
T  43058802 ttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 43058879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 239430 - 239351
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||| |||| ||| |||| ||||||||||||||    
T  239430 ccgttttgttctgttttaaaaggc-aggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagccta 239351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 28617084 - 28617160
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||||  |  ||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  28617084 ttttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8425433 - 8425358
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||| |||||| || ||||| |||| |||||||||    
T  8425433 ccgttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 26538171 - 26538096
Alignment:
Q  5 tttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||| |  ||||||||||||||||  |||||| |||||||| |||| |||||||||||||    
T  26538171 tttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 239822 - 239896
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    ||||||||||||||||||||| | ||||| |||||||||||| |||||| |||||||| |||| ||||| |||||    
T  239822 ttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 15551574 - 15551501
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    ||||||| |||||||||| || ||||||| ||||||||||| ||||||| |||||||| |||| ||||||||||    
T  15551574 ttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14432220 - 14432145
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||| | ||||||||||| | |||||||||| ||||||| |||||| |||||||| |||| |||||||||    
T  14432220 ccgttttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43058411 - 43058333
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||||| || | ||||||||| |||||| | |||||| |||||||  |||| ||||||||||||    
T  43058411 ccgttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 8425829 - 8425902
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||| ||||||||||| | ||||| ||||||||||||||||||| || || || |||| |||||||||    
T  8425829 gttttgttctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 8972312 - 8972239
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||||||| |||||| ||||||| ||||||||| |  |||||| |||||||| |||| ||||||||||    
T  8972312 ttttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 35779783 - 35779702
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||||||||||| || | ||||| |||||||||||   ||||| |||||||| |||| |||||||||||| |||||    
T  35779783 ttttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccaatatt 35779702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 44220130 - 44220192
Alignment:
Q  18 aaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||| |||||||||| |||||||||| |  |||||| |||||||||||| |||||||||||||    
T  44220130 aaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagcct 44220192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 43160074 - 43160007
Alignment:
Q  15 tttaaaag-ggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||| |||||||||| |||||||||| || |||||| | ||||| |||||||||||||| ||||    
T  43160074 tttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaatccta 43160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3025930 - 3026006
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||| ||||||||||||| |  |||| |||||||||||  |||||| ||||||||  ||||||||||||||||    
T  3025930 ccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggac-caaaatgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 4355820 - 4355750
Alignment:
Q  15 tttaaaag-ggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatat 84  Q
    |||||||| |||||||||| ||||||||||||  |||||| | ||||| |||| |||||||||||| ||||    
T  4355820 tttaaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagccaatat 4355750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18984197 - 18984116
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  18984197 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcctat 18984116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15646662 - 15646741
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  15646662 ccgttttgttctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 15646267 - 15646190
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||| | ||||||||||||    
T  15646267 ttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17433682 - 17433763
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||||| |||| |||||||||| ||||    
T  17433682 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaagtctat 17433763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21856120 - 21856044
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||||| |||| ||||||||||    
T  21856120 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29869698 - 29869619
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| | |||||||||||||||||  |||||| |||||||| |||| |||||||||||||    
T  29869698 ccgttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 50970745 - 50970824
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| | |||||||||||| ||||| |||||| |||||||| |||| |||||||||||||    
T  50970745 ccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29307031 - 29306953
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||  |||| ||||||||||||    
T  29307031 ccgttttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5539894 - 5539817
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| |||||| |||||||| |||| |||||||||||    
T  5539894 ccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5962656 - 5962579
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| || |||||||| ||||||||||||||||    
T  5962656 ccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8678619 - 8678542
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||||||| ||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| |||||||||||    
T  8678619 ccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 33144389 - 33144462
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||    
T  33144389 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 50970356 - 50970275
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    ||||||||||||| |||||||| | | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||||    
T  50970356 ccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 50970275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 52268366 - 52268289
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||| | ||||| ||||||||| || ||||||||||||||| |||| |||||||||||||    
T  52268366 gttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 4636439 - 4636515
Alignment:
Q  2 cgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    ||||||||||||||||||||||| | || ||||||||||||||| |||||| |||||||| |||| |||||||||||    
T  4636439 cgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9019051 - 9018971
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| |  ||||||||||| ||||| |||||| |||||||| |||| ||||||||||||||    
T  9019051 ccgttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagccta 9018971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5540285 - 5540364
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||| |||||||||||||||  | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  5540285 ccgttttcttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 8679011 - 8679086
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||||| | |||||||| ||||||||| |||||| |||||||| |||| ||||||||||||    
T  8679011 ttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18984586 - 18984665
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| |||||| || ||||| |||| |||||||||||||    
T  18984586 ccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29307409 - 29307487
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||||| |||| || |||||||||    
T  29307409 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29870086 - 29870164
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||||| || | |||||||||| ||||||| |||||| |||||||| |||| ||||||||||||    
T  29870086 ccgttttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33143995 - 33143925
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgta 71  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||    
T  33143995 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 5963047 - 5963120
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| |||||| |||||||| |||| |||||||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    ||||||| | ||||||||||| ||||||| ||||||||||||||||||| |||||||| |||| ||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26859526 - 26859610
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||| ||||||||||||||||||| | ||  |||||||||||||| |||||| |||||||  |||| ||||||||||||||||||    
T  26859526 ccgtattgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagcctatatt 26859610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 39154490 - 39154566
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||| ||||||||||| | | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  39154490 ttttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 15173564 - 15173641
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    ||||||||||||||||||||  | ||||||||| |||||||| |||||| |||||||| |||| |||||||||||||||    
T  15173564 ttttgttctgttttaaaaggc-aggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 15173641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17433294 - 17433216
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| |||  ||||||| ||||||| |||||| | |||||| |||| ||||||||||||    
T  17433294 ccgttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21856510 - 21856588
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||||| || | || ||||||| ||||||| |||||| |||||||| |||| ||||||||||||    
T  21856510 ccgttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26859137 - 26859059
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||||| || | |||||||||||| ||||| |||||| || ||||| |||| ||||||||||||    
T  26859137 ccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 39154097 - 39154015
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  |||||| | || ||| |||| |||||||||| |||||    
T  39154097 ccgttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaagtctata 39154015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9019430 - 9019510
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||| || |  |||||||| ||||||||  ||||| |||||||| |||| ||||||||||||||    
T  9019430 ccgttttgttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 9019510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15173174 - 15173099
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||  ||||||||||| | ||| |||||||||||||| |||||| |||||||| |||| |||||||||    
T  15173174 ccgttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2733424 - 2733504
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | ||||| ||||| || ||| |||||| || ||||| |||| | ||||||||||||    
T  2733424 ccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagccta 2733504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 47827058 - 47827106
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaa 52  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  47827058 ttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaa 47827106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4871 - 4791
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  4871 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5258 - 5334
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    ||||||| |||||||||||||||  | |||||||||||||| ||| |||||| |||||||| |||| ||||||||||    
T  5258 ccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19359603 - 19359686
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatat 84  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||    
T  19359603 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatat 19359686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2865222 - 2865303
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||||    
T  2865222 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 2865303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8461008 - 8460924
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||| |||| || |||||||||||||||    
T  8461008 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagcctatatt 8460924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18183436 - 18183516
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  18183436 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18183516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24331637 - 24331557
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||    
T  24331637 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagccta 24331557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24362303 - 24362383
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  24362303 ccgttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5819396 - 5819474
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  5819396 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5819007 - 5818926
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||| |||||    
T  5819007 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctat 5818926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18183048 - 18182967
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| ||| |||| ||||||||| |||||    
T  18183048 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaacctat 18182967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8647905 - 8647985
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | || ||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  8647905 ccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 8647985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15372340 - 15372420
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||| ||||    
T  15372340 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 15372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15709049 - 15708969
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| || ||||||||||||||||| |||||| || ||||| |||| ||||||||||||||    
T  15709049 ccgttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagccta 15708969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 29455212 - 29455288
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||  |||||||||||||    
T  29455212 ttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 6018389 - 6018315
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    ||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||    
T  6018389 ttttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 14215316 - 14215243
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||| |||| ||||||||||    
T  14215316 ttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 4222192 - 4222272
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatat 84  Q
    ||||||||||||||||||||| ||||||| ||||||||| || |||||| |||||||| |||| ||||||||||| |||||    
T  4222192 ttttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggaccaaaagtgtaattaagcttatat 4222272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 7348635 - 7348559
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||| | ||||| |||||||||||||| |||| | |||||| |||||||||||||||||    
T  7348635 gttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaacatgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14215710 - 14215790
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | || |||||||||||||||  ||||| |||||||| |||| ||||||||||||||    
T  14215710 ccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagccta 14215790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8461398 - 8461477
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||| | | || ||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  8461398 ccgttttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 8647513 - 8647438
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||| || | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  8647513 ttttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19359214 - 19359136
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||| ||||||||||| | |||||||||||||||||| |||||| | |||||| |||| ||||||||||||    
T  19359214 ccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 7349486 - 7349562
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||| ||||||||||| | | ||||| ||||||||||||||||||| |||||||| |||| ||||||||||||    
T  7349486 gttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29454818 - 29454739
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |||||| || | ||| |||| || ||||||||||    
T  29454818 ccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 164269 - 164191
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||| |||| |||||||| | ||||||||||||||||||  ||||| |||||||| |||| ||||||||||||    
T  164269 ccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 15371945 - 15371873
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    ||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||  |||| ||||||||||    
T  15371945 ttttgttctgttttaaaagggcaggaccaatt-cgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2864832 - 2864756
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||| ||||||||||||| |||| || |||||||||||| |||||| || ||||| |||| ||||||||||    
T  2864832 ccgttttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16018667 - 16018588
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||| ||||||||||| |||| || |||||||| ||| |||||| |||| ||| |||| |||||||||||||    
T  16018667 ccgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 164658 - 164738
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | ||||||||| |||||| | |||||| | |||||  |||| | ||||||||||||    
T  164658 ccgttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagccta 164738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 25000559 - 25000635
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||   ||||||| |||||||||||| |||||| | || ||| |||| |||||||||||||    
T  25000559 ttttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 14463988 - 14464067
Alignment:
Q  2 cgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||| ||||||||||  |  |  |||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  14463988 cgttttgttctattttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15709436 - 15709513
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||| ||| ||||| |||||| ||||||| |||||| || | ||| |||| ||||||||||||    
T  15709436 ccgttttgttctgttttaaa-gggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 27056531 - 27056412
Alignment:
Q  177 atcaacattaagaacctgctctcgtgtctgatcatttggaactagtacctcaacgtgctctgaatactcatgttcttcaacaagtttcaaaactggcttt 276  Q
    |||| ||||||||||| ||||| |||||||||||  ||||||| | |||||||||  || ||||| ||  ||||  |||||| |||  ||||| || |||    
T  27056531 atcatcattaagaacccgctcttgtgtctgatcaactggaactggaacctcaacgaactttgaatgcttttgttggtcaacatgttcaaaaacgggattt 27056432  T
Q  277 ggggatgtagggagactgtt 296  Q
    | ||||||||||||| ||||    
T  27056431 gtggatgtagggagattgtt 27056412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 4219737 - 4219663
Alignment:
Q  5 tttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||| || ||||||| ||| || | ||| |||||| |||||||  |||| ||||||||||||    
T  4219737 tttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 6019240 - 6019309
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaat 73  Q
    |||||||||||||||||||| | | || ||||||||||||||| |||||| | || ||| |||||||||||    
T  6019240 gttttgttctgttttaaaagagcaagatcagtttcgtgagtag-ccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 24325287 - 24325218
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaat 73  Q
    ||||||||||||||| ||||| |||| |||||||||| |||| |||||| | | |||| |||| ||||||    
T  24325287 ttttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 24361912 - 24361843
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaat 73  Q
    ||||||||||||||| ||||| |||| |||||||||| |||| |||||| | | |||| |||| ||||||    
T  24361912 ttttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15523313 - 15523230
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatat 84  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||    
T  15523313 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatat 15523230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20470978 - 20471058
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||| |||| ||||||||||||||    
T  20470978 ccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20471058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23494910 - 23494990
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  23494910 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25937748 - 25937668
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| | |||| |||||||| |||||||||||||||||||    
T  25937748 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagccta 25937668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38962286 - 38962369
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatat 84  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||||    
T  38962286 ccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaagtctatat 38962369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45082891 - 45082969
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||| |||| ||||||||||||    
T  45082891 ccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25447703 - 25447783
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||| ||| |||| ||||||||||||||    
T  25447703 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 54995147 - 54995059
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatattgtat 89  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||| | |||||||| |||| ||||||||| ||||| ||||||    
T  54995147 ccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaaacctattttgtat 54995059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48526648 - 48526723
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||| | |||||||    
T  48526648 ccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12234796 - 12234874
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| |||||| |||||||| |||| | ||||||||||    
T  12234796 ccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22434257 - 22434179
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | |||||||||||||||||  |||||| |||||||| |||| ||||||||||||    
T  22434257 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25447325 - 25447247
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | |||||||||| ||||||| |||||| |||||||| |||| ||||||||||||    
T  25447325 ccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 11153615 - 11153692
Alignment:
Q  2 cgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||| || | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  11153615 cgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 18763990 - 18764063
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||| |||| ||||||||||    
T  18763990 ttttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 20958330 - 20958403
Alignment:
Q  5 tttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||| |||| |||||||||||    
T  20958330 tttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 23494517 - 23494445
Alignment:
Q  5 tttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||||||||||||| | ||| |||||||||||||| |||||| |||||||| |||||||||||||||    
T  23494517 tttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33109762 - 33109686
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||||||||||||||| | | |||||||||||||||||  |||||| |||||||| |||||||||||||||    
T  33109762 ccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 46193872 - 46193948
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| |||||| |||||||| |||| ||||||||||    
T  46193872 ccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54995534 - 54995614
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||| |||||| |||||||| |||| ||||||||| ||||    
T  54995534 ccgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18751677 - 18751602
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| |||||||||||  ||||||| |||||| |||||||| |||| |||||||||    
T  18751677 ccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 46193480 - 46193405
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||||| | ||||| |||||||||||| |||||| |||||||| |||| ||||||||||||    
T  46193480 ttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 25938140 - 25938222
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||||||||||||||| | ||||| |||||||||||| |||||| || ||||| |||| ||||||||||||| ||||    
T  25938140 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcctttatt 25938222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 51021262 - 51021343
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||| ||||||||||||| | ||||| |||||||||||| |||||| |||||||  |||| |||||||||||||||    
T  51021262 ccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctat 51021343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12234407 - 12234327
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||| ||  |||||| | |||||| |||| ||||||||||||||    
T  12234407 ccgttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagccta 12234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 15523704 - 15523780
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||| ||||||||||||| | |||||||||||||||||| |||||| |||| ||| |||| |||||||||||||    
T  15523704 ttttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22434644 - 22434723
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||| |||| || | |||||||||||||||||| |||||| |||||||| |||||||||||||| ||||    
T  22434644 ccgttttgttctgttt-aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaaccta 22434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 4219633 - 4219559
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    |||||||| | |||||||| || | |||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 4220029 - 4220106
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||| | | || ||||||||||||||| |||||| |||||||| |||| ||||||||| ||||    
T  4220029 ttttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 4220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33109931 - 33110012
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||| ||||||||||||| | ||||| ||||||||| || |||||| | |||||| |||| |||||||||||||||    
T  33109931 ccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaacatgaggaccaaaagtgtaattaagcctat 33110012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 43243750 - 43243807
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggac 61  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||    
T  43243750 ttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11153224 - 11153145
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||| |||| ||||||||||| ||||||| ||| |||||||| |||||| |||||||| |||| | |||||||||||    
T  11153224 ccgttttattctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 16318251 - 16318322
Alignment:
Q  9 ttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||| | || |||||| |||||||| |||||| |||||||| |||| |||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 44890592 - 44890518
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    ||||||||||||||||||||| ||||||| |||||||| |||  ||||| || ||||| |||| |||||||||||    
T  44890592 ttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 2118368 - 2118295
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaag 77  Q
    ||||||| ||||||||||||| | ||||| |||||||||||| |||||| || ||||| |||| ||||||||||    
T  2118368 ttttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 43281260 - 43281317
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggac 61  Q
    |||||||||||||||||| || ||||||| |||||||||||| |||||| ||||||||    
T  43281260 ttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 48295013 - 48295094
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    ||||||| |||||||||  || | ||||| ||||||||||||| ||||| |||| ||| ||||||||||||||||| |||||    
T  48295013 ttttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaaacacgatgaccaaaaatgtaattaagccaatatt 48295094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2118762 - 2118846
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||| |||||||||||| || |||||||||| |||| || |||||| |||| ||| |||| ||||||||| ||| ||||    
T  2118762 ccgttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaaacctttatt 2118846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 20957264 - 20957196
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaa 72  Q
    ||||||| ||||||||||| ||||||||| |||||||||||  ||||||  ||||||| ||||||||||    
T  20957264 ttttgttgtgttttaaaagagtatgaccattttcgtgagtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 44892617 - 44892692
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    ||||||||||||||||||| || |  |||| ||||||||||||  ||||| |||||||| |||||| |||||||||    
T  44892617 gttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48526274 - 48526195
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| |   |||||||| |||||||  ||||| ||||| || |||| |||||||||||||    
T  48526274 ccgttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 10258363 - 10258433
Alignment:
Q  10 tctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||| | ||||| |||| ||||||| ||| || |||||||| |||| |||||||||||||    
T  10258363 tctgttttaaaagggcaggaccaatttcctgagtaggccacaacacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 16691011 - 16690939
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||| |||||||||  || | ||||| ||||||||||||| ||||| || ||||| ||||||||||||||    
T  16691011 ttttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 45082509 - 45082430
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||| ||||||||||| |  ||||||| |||||||||||||||| |||| ||| ||||  |||||||| ||||    
T  45082509 ccgttttgttctattttaaaagggcaaaaccagtt-cgtgagtagaccaaaacacgatgaccaaaagcgtaattaaaccta 45082430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 34807181 - 34807114
Alignment:
Q  15 tttaaaag-ggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||| |||||||||| |||||||||| || |||||| | ||||| |||| ||||||||||||||    
T  34807181 tttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccta 34807114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 51020874 - 51020795
Alignment:
Q  2 cgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||||| | ||||||||| |||| |   |||||| | |||||  |||| ||||||||||||||    
T  51020874 cgttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagccta 51020795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 35363096 - 35363146
Alignment:
Q  29 accagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||| |||||| |||||||  |||| ||||||||||||    
T  35363096 accagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 48713816 - 48713894
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    ||||||||||||||||||| | ||||||| |||| ||||||| | |||| ||||| |  |||| ||||||||| |||||    
T  48713816 ttttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaaaagtgtaattaaacctat 48713894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 48293639 - 48293590
Alignment:
Q  34 tttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||||||||||  |||||| |||||||| |||| ||||||||||||||||    
T  48293639 tttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcctata 48293590  T

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Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4275831 - 4275913
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||    
T  4275831 ccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctata 4275913  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31779119 - 31779200
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||||    
T  31779119 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 31779200  T

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Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29801883 - 29801963
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||  |||| ||||||||||||||    
T  29801883 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagccta 29801963  T

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Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31778731 - 31778652
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||||| |||||||| |||| |||||||||||||    
T  31778731 ccgttttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32535430 - 32535508
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  32535430 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

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Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17464569 - 17464489
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| ||||||||||||| || ||| |||||| |||||||| |||| ||||||||||||||    
T  17464569 ccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagccta 17464489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43973907 - 43973987
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| |  ||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  43973907 ccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 43973987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26274645 - 26274570
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||  ||||||||||||||    
T  26274645 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 39556047 - 39556122
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  39556047 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23644932 - 23645010
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||||||| |||| | ||||||||||    
T  23644932 ccgttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25853312 - 25853234
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||| |||||| |||||||| |||| ||||||||||||    
T  25853312 ccgttttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5137058 - 5136977
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| ||||||| |||||||||| | |||||| |||||||| |||| ||||||||| |||||    
T  5137058 ccgttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaacctat 5136977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 23644538 - 23644461
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||| || | ||||| |||||||||||| ||||||||||||||| |||| |||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20840638 - 20840558
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||| |||||||| || | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  20840638 ccgttttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20840558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 39555653 - 39555577
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||| || | |||||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  39555653 ttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17464959 - 17465038
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||| ||||||||||||  |||||||||| || |||| |||||| |||||||| ||||||||||||||||||    
T  17464959 ccgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20841028 - 20841107
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||||| || | |||||||||||||||||| |||||| ||||| || |||| |||||||||||||    
T  20841028 ccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 41046778 - 41046703
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| |||||||||||||| | ||| |||||| |||||||| |||| |||||||||    
T  41046778 ccgttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37727397 - 37727475
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||| | | |||||||||||||||||| |||||| | |||||| |||| ||||||||||||    
T  37727397 ccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 51473503 - 51473429
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    ||||||||||||||||||||| | ||||| |||||||| |||||||||| |||||||| |||| |||||||||||    
T  51473503 ttttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaaaagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24301023 - 24301103
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||| |||||||||| || | ||||| |||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  24301023 ccgttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 24301103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 30098233 - 30098309
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||||| | |||||||||||||||||   ||||| |||||||| |||| |||||||||||||    
T  30098233 ttttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 48453067 - 48452987
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||| || | |||||||||||||||||| |||||| |||| ||| |||| |||||| |||||||    
T  48453067 ccgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagccta 48452987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27393739 - 27393660
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||  ||||| |||||||| |||| |||||||||||||    
T  27393739 ccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37727007 - 37726928
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||| ||||||||||||| |  ||||||||||| || ||||||||| |||||||| |||| |||||||||||||    
T  37727007 ccgttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22425280 - 22425354
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaatta 75  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||| || ||| |||||||| |||| ||||||||    
T  22425280 ccgttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 27394045 - 27394123
Alignment:
Q  2 cgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||| || | ||||  |||||||||||| |||||| |||||||| |||| |||||||||||||    
T  27394045 cgttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29801434 - 29801356
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | ||||||||| |||||||  |||||| |||| ||| |||| ||||||||||||    
T  29801434 ccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 37222040 - 37222122
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||  ||||| |||||||| |||| ||||||||||||||||||    
T  37222040 gttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcctatatt 37222122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43973519 - 43973441
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| || | || ||||||||||||  ||||| |||||||| |||| ||||||||||||    
T  43973519 ccgttttgttctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 5137451 - 5137528
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||| ||||||||||| |  ||||||||| ||||||| |||||| |||||||| |||| ||||||||||||||    
T  5137451 ttttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 5137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26837438 - 26837357
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||| ||| |||| |||||||| | ||||| |||||||||||| ||||||||| ||||| |||||||||||||| |||||    
T  26837438 ccgtttcgttatgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaacctat 26837357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32535037 - 32534962
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||||||||||||||||| || | ||||| |||||||||||  |||||| |||||||| |||| |||||||||    
T  32535037 ccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 25853697 - 25853775
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||| |  | ||||||||||||||||||| ||||| |||||||  |||| |||||||||| ||||    
T  25853697 ttttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaagtctat 25853775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 32697170 - 32697244
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||||||||||||||||||  |||| | |||||||||||| | |||| |||||||| |||||| |||||||||    
T  32697170 ttttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 25612446 - 25612519
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||| ||||||||||| | ||||| ||||||||||||  ||||| |||||||| |||| |||||||||    
T  25612446 gttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 30104549 - 30104480
Alignment:
Q  12 tgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||| | ||||| ||||||||||||  ||||| |||||||| |||| ||||||||||||||    
T  30104549 tgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 30104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 51474804 - 51474881
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||| ||||||||||||| ||||||| |||||||||||  |||||| ||| | || |||| ||||||||||||||    
T  51474804 ttttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaacacgggaaccaaaagtgtaattaagccta 51474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26275033 - 26275077
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtag 45  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  26275033 ccgttttattctgttttaaaagggtaggaccagtttcgtgagtag 26275077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26837823 - 26837902
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||| ||||||| ||| |  ||||||||||| ||||| |||||| |||||||| |||| ||||||||||||||    
T  26837823 ccgttttgttctattttaaa-gggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 26837902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 23228478 - 23228552
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||| |||||||||||| |||| || |||||||||||| |||||| ||| |||| |||| ||||||||||||    
T  23228478 ttttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaacacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 37220632 - 37220553
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||| |||||||||||||| | |||| |  | | |||||||| ||||||||||||||| |||| ||||||||||||||||    
T  37220632 ttttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctata 37220553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 50116876 - 50116954
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   ||||| |||||||  |||| ||||||||||||    
T  50116876 ccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22424892 - 22424812
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||  |  ||||||||||| ||||| |  ||| ||||| || |||| ||||||||||||||    
T  22424892 ccgttttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagccta 22424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 32695778 - 32695706
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||| |  || | || |||||| ||||| |||||||| |||||| ||||||||||||||    
T  32695778 ttttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaaatatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24300634 - 24300560
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||| |||||||||||||||  | |||||||||||||| ||  |||||| |||| ||| ||||||||||||||    
T  24300634 ccgttttattctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 19590603 - 19590519
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| |||||||||||| |||||    
T  19590603 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccgatatt 19590519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 2658914 - 2658837
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||| ||||||||||| | |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||    
T  2658914 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagccta 2658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19830498 - 19830417
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||| |||||    
T  19830498 ccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctat 19830417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 35289368 - 35289449
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||  |||| |||||||||||||||    
T  35289368 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctat 35289449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19590992 - 19591072
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||| ||||| || |||| ||||||||||||||    
T  19590992 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagccta 19591072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38859108 - 38859188
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  38859108 ccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 38859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 34533866 - 34533787
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    |||| |||||||||||||| | |||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||    
T  34533866 ttttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctata 34533787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 35288978 - 35288903
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||| |||| ||||||||||||    
T  35288978 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37786845 - 37786761
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||| ||||||||||||| | |||||||||||| ||||| |||||| |||||||| |||| ||||||||||||| ||||    
T  37786845 ccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctttatt 37786761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29100318 - 29100393
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| | ||||| ||| ||||||||||||||| |||||||| |||| |||||||||    
T  29100318 ccgttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 32004689 - 32004610
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    ||||||||||||||||||||| | || || |||||||||||| |||||| |||||||| |||| ||||||||||||||||    
T  32004689 ttttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctata 32004610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32005081 - 32005159
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||| ||||||||||| |||||||||||||||||||  |||||| | |||||| |||| ||||||||||||    
T  32005081 ccgttttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23952809 - 23952728
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagta-gaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| |  ||||| |||||||| |||| ||||||||||||||    
T  23952809 ccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagccta 23952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23953196 - 23953276
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    ||||||||||||||||| ||||||   ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||    
T  23953196 ccgttttgttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaa-taagcctat 23953276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2659307 - 2659387
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||| ||| ||| ||||||  ||||||| |||| ||||||||||||||    
T  2659307 ccgttttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagccta 2659387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37787234 - 37787314
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||| |||||||| | | |||||||||||||||||| |||||| |||||||| |||| | ||||||||||||    
T  37787234 ccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 37787314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38858721 - 38858637
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||||||||||||||| | | |||||||||||||||||  |||||| |||||||| |||| ||| ||||||||| ||||    
T  38858721 ccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctttatt 38858637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19830886 - 19830965
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||| ||||||||||||  | ||||||||| |||||||| |||||| |||||||| |||| |||||||||||||    
T  19830886 ccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29099928 - 29099862
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaa 67  Q
    |||||||||||||||||||||||| | || ||||||||||||||| |||||| |||||||| |||||    
T  29099928 ccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaaa 29099862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 28584392 - 28584472
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatat 84  Q
    ||||||||||||||||||||  ||||||| |||||||| ||| |||||  |||||||| |||| ||||||||||| |||||    
T  28584392 ttttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaagcacgaggacgaaaagtgtaattaagcttatat 28584472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34534258 - 34534338
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||| ||| | || ||||||||||||||| |||||| ||||| || |||| | ||||||||||||    
T  34534258 ccgttttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 4478175 - 4478248
Alignment:
Q  9 ttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||| | |||||||||||||||||| |||||| |||||||  |||| |||| |||| |||||    
T  4478175 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaacctat 4478248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 38161026 - 38160949
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||||||||||| | ||  | |||||||||||| ||||||  ||||||| |||| ||||||||||||||    
T  38161026 ttttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggaccaaaagtgtaattaagccta 38160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4641518 - 4641443
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||| ||||| ||||| | | |||||||||||||||||  |||||| |||||||| |||| |||||||||    
T  4641518 ccgttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4641911 - 4641983
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||  | |||||||   |||||||| |||||| |||||||| |||| |||||||||    
T  4641911 ccgttttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

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Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 7732553 - 7732486
Alignment:
Q  15 tttaaaag-ggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||| |||| ||||| |||||||||| || |||||| | ||||| |||||||||||||||||||    
T  7732553 tttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagccta 7732486  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 28583515 - 28583436
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    ||||| || ||||||||||||| |  |||| | || ||||||| |||||| |||||||| |||| |||||||||||||||    
T  28583515 gttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 28583436  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 49064065 - 49064024
Alignment:
Q  48 caaaatacgaggacaaaaaatgtaattaagcctatattgtat 89  Q
    |||||||||||||| |||| ||||||||||||| ||||||||    
T  49064065 caaaatacgaggaccaaaagtgtaattaagcctttattgtat 49064024  T

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Target: scaffold0951 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2134 - 2214
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||| ||||| |||||| |||||||| |||| ||||||||||||||    
T  2134 ccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2214  T

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Target: scaffold0951; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 1742 - 1663
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctata 83  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||| | |||||| |||| ||||||||||||||||    
T  1742 ttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagcctata 1663  T

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Target: scaffold0432 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10339 - 10414
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  10339 ccgttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

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Target: scaffold0432; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 10007 - 9935
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||||| | ||||||||| | || ||||||||||| ||| | |||| |||||||| ||||||||||||||    
T  10007 ttttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

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Target: scaffold0019 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 134141 - 134220
Alignment:
Q  2 cgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||    
T  134141 cgttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 134220  T

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Target: scaffold1223 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1208 - 1286
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | |||||||||||||||||  |||||| |||||||| |||| ||||||||||||    
T  1208 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

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Target: scaffold1223; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 831 - 750
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctat 82  Q
    |||||||||||||||||||||||| | ||||||| |||||||||| |||||| |||| ||| |||| |||||||||| ||||    
T  831 ccgttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagtctat 750  T

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Target: scaffold0176 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19088 - 19166
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||||||||||||||||| | ||| |||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  19088 ccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

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Target: scaffold0176; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18913 - 18829
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatatt 85  Q
    |||||||||| ||||||||||||| | |||||||||||||||||| |||||| |  ||||| |||| |||||| |||||| ||||    
T  18913 ccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcctttatt 18829  T

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Target: scaffold0273 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4674 - 4754
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| | |||||||||||||||||  |||||| |||| ||| |||| ||||||||||||||    
T  4674 ccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagccta 4754  T

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Target: scaffold0113 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28710 - 28789
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||| |||| ||| |||| |||||||| ||||    
T  28710 ccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattatgcct 28789  T

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Target: scaffold0417 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11090 - 11168
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcc 79  Q
    |||||||||| ||||||||||||| | |||||||||||| ||||| |||||| |||||||| |||| ||||||||||||    
T  11090 ccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11168  T

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Target: scaffold0417; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10699 - 10640
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgagga 60  Q
    |||||||||||||||||||||||| | |||||||||| ||||||| |||||| |||||||    
T  10699 ccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

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Target: scaffold0057 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 61928 - 62000
Alignment:
Q  4 ttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||  |||| |||||||||    
T  61928 ttttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

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Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 61102 - 61023
Alignment:
Q  5 tttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcctatat 84  Q
    |||||||| |||||||| || | || || |||||||||||| |||||| |||||||  |||| |||| ||||||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagcctatat 61023  T

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Target: scaffold1585 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 643 - 568
Alignment:
Q  3 gttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagc 78  Q
    |||||||||||||||||||||| |||| || |||||||||||| |||||| |||||||  |||| |||||||||||    
T  643 gttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

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Target: scaffold0007 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 64772 - 64847
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||||||||||||||||||||   |||||||||||||||||  |||||| |||||||| |||| |||||||||    
T  64772 ccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 64847  T

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Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 64380 - 64301
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagcct 80  Q
    |||||||||||||||||||||||  | || ||||||||||||||   ||||| |||||||| |||| |||||||||||||    
T  64380 ccgttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

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Target: scaffold0027 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42625 - 42705
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaagccta 81  Q
    |||||||||||||||||||||||| |  | ||||||| |||||||||||||| |||||| | |||| | ||||||||||||    
T  42625 ccgttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagccta 42705  T

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Target: scaffold0027; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42247 - 42172
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    ||||||||||||||||||||| || | || ||||||||||| |||||||||| ||||| || |||| |||||||||    
T  42247 ccgttttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

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Target: scaffold0076 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8476 - 8551
Alignment:
Q  1 ccgttttgttctgttttaaaagggtatgaccagtttcgtgagtagaccaaaatacgaggacaaaaaatgtaattaa 76  Q
    |||||||| | ||||||||||||||| |||||||||||| |||||||||||| | || ||| |||| |||||||||    
T  8476 ccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaattaa 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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