View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3881_low_3 (Length: 488)

Name: NF3881_low_3
Description: NF3881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3881_low_3
NF3881_low_3
[»] chr2 (36 HSPs)
chr2 (18-481)||(12353380-12353843)
chr2 (312-358)||(29544650-29544696)
chr2 (312-358)||(30089072-30089118)
chr2 (312-358)||(30125676-30125722)
chr2 (312-358)||(35820293-35820339)
chr2 (312-358)||(36359337-36359383)
chr2 (313-358)||(21497691-21497736)
chr2 (312-357)||(42791318-42791363)
chr2 (312-356)||(7206148-7206192)
chr2 (315-358)||(10723965-10724008)
chr2 (150-217)||(12745783-12745850)
chr2 (315-358)||(27848184-27848227)
chr2 (312-358)||(4509560-4509606)
chr2 (316-358)||(10735823-10735865)
chr2 (312-358)||(24592838-24592884)
chr2 (312-358)||(25186234-25186280)
chr2 (312-358)||(30045476-30045522)
chr2 (312-358)||(30050639-30050685)
chr2 (312-358)||(30141683-30141729)
chr2 (312-358)||(30243273-30243319)
chr2 (312-358)||(31815879-31815925)
chr2 (312-358)||(41778936-41778982)
chr2 (312-357)||(8091151-8091196)
chr2 (312-349)||(12413516-12413553)
chr2 (312-349)||(12425576-12425613)
chr2 (313-358)||(20200729-20200774)
chr2 (312-349)||(20565076-20565113)
chr2 (312-357)||(22709108-22709153)
chr2 (313-358)||(24581009-24581054)
chr2 (312-349)||(29734714-29734751)
chr2 (312-349)||(43117191-43117228)
chr2 (312-356)||(1861803-1861847)
chr2 (312-344)||(21558812-21558844)
chr2 (312-352)||(40967369-40967409)
chr2 (312-356)||(41763872-41763916)
chr2 (313-349)||(43356543-43356579)
[»] chr8 (24 HSPs)
chr8 (312-358)||(13357433-13357479)
chr8 (312-353)||(42208466-42208507)
chr8 (312-359)||(44794916-44794963)
chr8 (312-358)||(2489703-2489749)
chr8 (312-358)||(8717467-8717513)
chr8 (312-358)||(12748924-12748970)
chr8 (312-358)||(25136836-25136882)
chr8 (312-358)||(32051524-32051570)
chr8 (312-358)||(33743598-33743644)
chr8 (313-358)||(44084264-44084308)
chr8 (312-356)||(10871888-10871932)
chr8 (311-358)||(15001267-15001314)
chr8 (312-358)||(444436-444482)
chr8 (312-358)||(8881298-8881344)
chr8 (312-358)||(11709009-11709055)
chr8 (316-358)||(13449789-13449831)
chr8 (312-358)||(13575312-13575358)
chr8 (312-358)||(17704036-17704082)
chr8 (312-358)||(24838162-24838208)
chr8 (313-358)||(9241039-9241084)
chr8 (313-358)||(19260571-19260616)
chr8 (312-348)||(7553702-7553738)
chr8 (313-349)||(33105415-33105451)
chr8 (314-358)||(35102659-35102703)
[»] chr6 (19 HSPs)
chr6 (312-358)||(33824904-33824950)
chr6 (312-358)||(8569732-8569778)
chr6 (312-358)||(16390452-16390498)
chr6 (312-349)||(8637438-8637475)
chr6 (313-358)||(15187087-15187132)
chr6 (313-358)||(15473474-15473519)
chr6 (312-349)||(31971552-31971589)
chr6 (311-357)||(655742-655788)
chr6 (312-358)||(1918450-1918496)
chr6 (312-358)||(3358414-3358460)
chr6 (312-358)||(3808110-3808156)
chr6 (312-358)||(8629688-8629734)
chr6 (312-358)||(17151259-17151305)
chr6 (312-358)||(29740505-29740551)
chr6 (313-358)||(17113452-17113497)
chr6 (313-358)||(34701171-34701216)
chr6 (313-349)||(8809330-8809366)
chr6 (313-349)||(28758291-28758327)
chr6 (312-356)||(33976267-33976311)
[»] chr4 (40 HSPs)
chr4 (312-358)||(7230303-7230349)
chr4 (312-358)||(56551584-56551630)
chr4 (312-358)||(9783922-9783968)
chr4 (312-358)||(43034334-43034380)
chr4 (312-358)||(49041973-49042019)
chr4 (312-356)||(21623413-21623457)
chr4 (312-358)||(281614-281660)
chr4 (312-358)||(11198351-11198397)
chr4 (312-358)||(11949755-11949801)
chr4 (312-358)||(12322696-12322742)
chr4 (312-358)||(16304090-16304136)
chr4 (312-358)||(19908715-19908761)
chr4 (312-358)||(22630352-22630398)
chr4 (312-358)||(27871370-27871416)
chr4 (312-354)||(31138989-31139031)
chr4 (312-358)||(43782297-43782343)
chr4 (312-358)||(50362131-50362177)
chr4 (312-349)||(675941-675978)
chr4 (313-358)||(3936651-3936696)
chr4 (313-358)||(19479469-19479514)
chr4 (312-349)||(20383511-20383548)
chr4 (312-349)||(20799395-20799432)
chr4 (312-357)||(37735812-37735857)
chr4 (313-358)||(37930839-37930884)
chr4 (313-358)||(42344610-42344655)
chr4 (312-353)||(49953400-49953441)
chr4 (313-358)||(54857607-54857652)
chr4 (312-357)||(56204970-56205014)
chr4 (312-348)||(836237-836273)
chr4 (315-351)||(1701635-1701671)
chr4 (50-105)||(8138318-8138374)
chr4 (312-348)||(17423179-17423215)
chr4 (312-348)||(23160063-23160099)
chr4 (312-348)||(25783451-25783487)
chr4 (312-344)||(25978340-25978372)
chr4 (312-352)||(29908079-29908119)
chr4 (312-348)||(30847984-30848020)
chr4 (314-358)||(34042265-34042309)
chr4 (313-349)||(40070969-40071005)
chr4 (312-352)||(47806168-47806208)
[»] chr1 (20 HSPs)
chr1 (312-358)||(34521182-34521228)
chr1 (315-358)||(34595898-34595941)
chr1 (312-358)||(6000135-6000181)
chr1 (312-356)||(26755639-26755683)
chr1 (312-358)||(1794619-1794665)
chr1 (312-358)||(8736458-8736504)
chr1 (312-358)||(16967186-16967232)
chr1 (312-354)||(25532996-25533038)
chr1 (312-354)||(29739360-29739402)
chr1 (312-358)||(33020035-33020081)
chr1 (312-358)||(41973278-41973324)
chr1 (312-358)||(46707895-46707941)
chr1 (317-358)||(8780799-8780840)
chr1 (312-349)||(10654448-10654485)
chr1 (312-357)||(13054896-13054941)
chr1 (312-349)||(22335381-22335418)
chr1 (313-358)||(32950753-32950798)
chr1 (312-349)||(33153881-33153918)
chr1 (313-349)||(12268985-12269021)
chr1 (313-349)||(17221521-17221557)
[»] chr7 (19 HSPs)
chr7 (312-358)||(27462428-27462474)
chr7 (313-358)||(10326978-10327022)
chr7 (313-357)||(7670458-7670502)
chr7 (319-358)||(42219379-42219418)
chr7 (312-358)||(8237624-8237670)
chr7 (312-358)||(10244750-10244795)
chr7 (312-358)||(16577852-16577898)
chr7 (312-358)||(16587764-16587810)
chr7 (312-358)||(19416537-19416583)
chr7 (312-358)||(19599168-19599214)
chr7 (315-357)||(19988688-19988730)
chr7 (316-358)||(42095935-42095977)
chr7 (312-349)||(18714471-18714508)
chr7 (312-357)||(19626518-19626563)
chr7 (312-349)||(20085760-20085797)
chr7 (312-349)||(28736634-28736671)
chr7 (312-357)||(46737808-46737853)
chr7 (313-357)||(1079685-1079729)
chr7 (318-358)||(2512338-2512378)
[»] chr5 (20 HSPs)
chr5 (312-358)||(22522793-22522839)
chr5 (312-358)||(25979867-25979913)
chr5 (312-358)||(40715941-40715987)
chr5 (313-357)||(42473918-42473962)
chr5 (312-358)||(3052302-3052348)
chr5 (312-358)||(6489030-6489076)
chr5 (312-358)||(6624799-6624845)
chr5 (312-358)||(18391623-18391669)
chr5 (312-354)||(18557877-18557919)
chr5 (312-358)||(23218983-23219029)
chr5 (312-358)||(25509334-25509380)
chr5 (312-358)||(30893956-30894002)
chr5 (312-358)||(37614419-37614465)
chr5 (312-358)||(42817104-42817150)
chr5 (312-349)||(10531563-10531600)
chr5 (312-357)||(34191456-34191501)
chr5 (50-105)||(1406258-1406314)
chr5 (312-356)||(16133059-16133103)
chr5 (313-349)||(16579375-16579411)
chr5 (312-352)||(40446006-40446046)
[»] chr3 (29 HSPs)
chr3 (312-358)||(8075808-8075854)
chr3 (312-358)||(38130951-38130997)
chr3 (313-358)||(39100075-39100121)
chr3 (312-358)||(48849755-48849801)
chr3 (314-358)||(913592-913636)
chr3 (312-356)||(48656893-48656937)
chr3 (312-358)||(1456532-1456578)
chr3 (312-358)||(3755362-3755408)
chr3 (312-358)||(4601867-4601913)
chr3 (312-358)||(5349551-5349597)
chr3 (312-358)||(18870717-18870763)
chr3 (312-358)||(22799718-22799764)
chr3 (312-358)||(25340916-25340962)
chr3 (312-358)||(25441492-25441538)
chr3 (312-358)||(34899120-34899166)
chr3 (312-358)||(35863805-35863851)
chr3 (312-358)||(45431971-45432017)
chr3 (312-358)||(52453249-52453295)
chr3 (312-357)||(20018220-20018265)
chr3 (313-358)||(22722426-22722471)
chr3 (312-349)||(24428474-24428511)
chr3 (312-357)||(38034802-38034847)
chr3 (312-349)||(41817522-41817559)
chr3 (312-357)||(42886502-42886547)
chr3 (317-358)||(45885469-45885510)
chr3 (310-358)||(11358255-11358303)
chr3 (318-358)||(35210123-35210163)
chr3 (312-348)||(47536482-47536518)
chr3 (62-105)||(48842056-48842100)
[»] scaffold1694 (1 HSPs)
scaffold1694 (312-354)||(178-220)
[»] scaffold0006 (1 HSPs)
scaffold0006 (313-351)||(223676-223714)
[»] scaffold0334 (1 HSPs)
scaffold0334 (312-349)||(5205-5242)
[»] scaffold0118 (1 HSPs)
scaffold0118 (312-353)||(40021-40062)
[»] scaffold1127 (1 HSPs)
scaffold1127 (313-349)||(1166-1202)
[»] scaffold0160 (1 HSPs)
scaffold0160 (313-349)||(22935-22971)


Alignment Details
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 18 - 481
Target Start/End: Original strand, 12353380 - 12353843
Alignment:
Q  18 tatatttggcagaatg--tacacaagttcagcacaagaggaaatgagagtgtaattcaatcttctctaaggggagggggtgtaatttacttactctnnnn 115  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| | ||||||||        
T  12353380 tatatttggcagaatgcatacacaagttcagcacaagaggaaatgagagtgtaattcaaacttctctaaggagagggggtgtaatctgcttactctaaca 12353479  T
Q  116 nnntgtacggtacagtatatcacaaatgattggcgcgcaaggtttgtggtgcacaaagttcaaggtggttgtagattttagagtacaattttttattcct 215  Q
       | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12353480 aaatctacggtatagtatatcacaaatgattggcgcgcaaggtttgtggtgcacaaagttcaaggtggttgtagattttagagtacaattttttattcct 12353579  T
Q  216 acaaataaaaattaggcttaattgcatttttattccccctactttatttattttataacttttcatcctcatcctaataagtttcactcagttgg---cg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||  ||||||| ||||| ||||    |    
T  12353580 acaaataaaaattaggcttaattgcatttttattccccctactttatttattttataacttttcatacttgtcctcgtaagtttaactcaattggtaagg 12353679  T
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccaccgnnnnnnnnnnnnntcatcctcgccccattttagggtcaattttgatgatatgg 412  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| ||             |||||||| |||||||||||||||||||||||||||||||    
T  12353680 acaatgcataatatatgcagggtccg-ggttcaaacttcggccatcg----aaaaaaaaatcatcctcaccccattttagggtcaattttgatgatatgg 12353774  T
Q  413 caatttcacttatgacaaattctgaaatgtatgatgatatgacatcctcctcgccccatcattcatctc 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12353775 caatttcacttatgacaaattctgaaatgtatgatgatatgacatcctcctcaccccatcattcatctc 12353843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 29544650 - 29544696
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  29544650 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 29544696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 30089072 - 30089118
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| || |||||| |||||||||||||||||||    
T  30089072 gacaatgcataatatatacaaggtccggggttcaaacctcggccacc 30089118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 30125676 - 30125722
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| || |||||| |||||||||||||||||||    
T  30125676 gacaatgcataatatatacaaggtccggggttcaaacctcggccacc 30125722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 35820339 - 35820293
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||||    
T  35820339 gacaatgcataatacatgcaaggtccggggttcaaacctcggccacc 35820293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 36359337 - 36359383
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||||    
T  36359337 gacaatgcataatatatgcaaggtccggggttcaaaccttggccacc 36359383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 21497691 - 21497736
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  21497691 acaatgcataatatatgcaaggttcgaggtttaaacctcggccacc 21497736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 42791318 - 42791363
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||    
T  42791318 gacaatgcataatatatgcaaggtccggggttcaaaccccggccac 42791363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 7206148 - 7206192
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||    
T  7206148 gacaatgcataatatatgcaaggtccgaggtttaaaccccggcca 7206192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 358
Target Start/End: Original strand, 10723965 - 10724008
Alignment:
Q  315 aatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| |||| |||||||||||| ||||||||    
T  10723965 aatgcataatatatgcaaggtctgaggttcaaaccccggccacc 10724008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 12745850 - 12745783
Alignment:
Q  150 gcgcaaggtttgtggtgcacaaagttcaaggtggttgtagattttagagtacaattttttattcctac 217  Q
    ||||||||||| ||||||| || ||||  |   |||||||||||||||||||||| ||||||||||||    
T  12745850 gcgcaaggtttttggtgcataatgttcgtgagtgttgtagattttagagtacaatcttttattcctac 12745783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 358
Target Start/End: Original strand, 27848184 - 27848227
Alignment:
Q  315 aatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||    
T  27848184 aatgcataatatatgcaaggtccggggttcaaaccccggccacc 27848227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 4509560 - 4509606
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| ||||| ||||||||| ||| ||||||    
T  4509560 gacaatgcataatatatgcaaggtccaaggttcaaatctcagccacc 4509606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 10735865 - 10735823
Alignment:
Q  316 atgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||| |||||| |||||||||| ||||||||    
T  10735865 atgcataatatatgcaaggtccggggttcaaaccccggccacc 10735823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 24592884 - 24592838
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||    
T  24592884 gacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 24592838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 25186280 - 25186234
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| | ||||||    
T  25186280 gacaatgcataatatatgcaaggtccggggttcaaaccccagccacc 25186234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 30045476 - 30045522
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| || ||| |||| |||||||||||||||||    
T  30045476 gacaatgcataatatatacaaggttcgagattcaaacctcggccacc 30045522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 30050639 - 30050685
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| || ||| |||| |||||||||||||||||    
T  30050639 gacaatgcataatatatacaaggttcgagattcaaacctcggccacc 30050685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 30141683 - 30141729
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| || ||| |||| |||||||||||||||||    
T  30141683 gacaatgcataatatatacaaggttcgagattcaaacctcggccacc 30141729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 30243273 - 30243319
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| || ||| || |||||||||||||||||||    
T  30243273 gacaatgcataatatatacaaggttcggggttcaaacctcggccacc 30243319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 31815925 - 31815879
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| || |||||    
T  31815925 gacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 31815879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 41778982 - 41778936
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||||||||| || | ||||||||    
T  41778982 gacaatgcataatatatgcaaggtccgaggttcgaatcccggccacc 41778936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 8091196 - 8091151
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||||||||||| |||||| ||||||||| ||| ||||    
T  8091196 gacaatgcataatatatgcaaggtccggggttcaaacatcgaccac 8091151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 12413516 - 12413553
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  12413516 gacaatgcataatatatgcaaggtctgaggttcaaacc 12413553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 12425576 - 12425613
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  12425576 gacaatgcataatatatgcaaggtctgaggttcaaacc 12425613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 20200729 - 20200774
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| |||||  |||||||||| ||||||||    
T  20200729 acaatgcataatatatgcaaggtccagggttcaaaccccggccacc 20200774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 20565113 - 20565076
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  20565113 gacaatgcataatatatgcaaggtccggggttcaaacc 20565076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 22709108 - 22709153
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||| ||||||| |||||| |||||||||| |||||||    
T  22709108 gacaatgcataaaatatgcaaggtccggggttcaaaccccggccac 22709153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 24581054 - 24581009
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| ||| ||||||||||||| || |||||    
T  24581054 acaatgcataatatatgcaaggttcgaggttcaaaccccgaccacc 24581009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 29734714 - 29734751
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  29734714 gacaatgcataatatatgcaaggtccgtggttcaaacc 29734751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 43117228 - 43117191
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  43117228 gacaatgcataatatatgcaaggtctgaggttcaaacc 43117191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 1861847 - 1861803
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    |||||||||||||||||||| |||||  ||||||||| |||||||    
T  1861847 gacaatgcataatatatgcaaggtccatggttcaaacatcggcca 1861803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 344
Target Start/End: Complemental strand, 21558844 - 21558812
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttc 344  Q
    |||||||||||||||||||| ||||||||||||    
T  21558844 gacaatgcataatatatgcaaggtccgaggttc 21558812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 40967409 - 40967369
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcg 352  Q
    |||||||||||||||||||| |||  |||||||||||||||    
T  40967409 gacaatgcataatatatgcaaggtttgaggttcaaacctcg 40967369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 41763916 - 41763872
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    ||||||||||| |||||||| |||||| |||||||||| ||||||    
T  41763916 gacaatgcatagtatatgcacggtccggggttcaaaccccggcca 41763872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 43356579 - 43356543
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  43356579 acaatgcataatatatgcaaggtccgaggttcgaacc 43356543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 13357479 - 13357433
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  13357479 gacaatgcataatatatgcaaggtacgaggttcaaacctcggccacc 13357433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 42208507 - 42208466
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcgg 353  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  42208507 gacaatgcataatatatgcaaggtccgaggttcaaacctcgg 42208466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 44794916 - 44794963
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccaccg 359  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||    
T  44794916 gacaatgcataatatatgcaaggtccggagttcaaacctcggccaccg 44794963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 2489703 - 2489749
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  2489703 gacaatgcataatatatgcaacgtctgaggttcaaacctcggccacc 2489749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 8717513 - 8717467
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||    
T  8717513 gacaatgcataatatatgcaaggttcggggttcaaacctcggccacc 8717467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 12748924 - 12748970
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  12748924 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 12748970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 25136882 - 25136836
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  25136882 gacaaggcataaaatatgcaaggtccgaggttcaaacctcggccacc 25136836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 32051570 - 32051524
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  32051570 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 32051524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 33743598 - 33743644
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||||    
T  33743598 gacaatgcataaaatatgcaaggtccgaggttcaaacttcggccacc 33743644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 44084308 - 44084264
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  44084308 acaatgcataatatatgcaaggtccg-ggttcaaacctcggccacc 44084264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 10871932 - 10871888
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||    
T  10871932 gacaatgcataatgtatgcaaggtccggggttcaaacctcggcca 10871888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 15001314 - 15001267
Alignment:
Q  311 cgacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||| ||||||| ||||| ||||||||||| ||||||||    
T  15001314 cgacaatgcataaaatatgcaaggtccaaggttcaaaccccggccacc 15001267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 444436 - 444482
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||| ||||| ||||||||    
T  444436 gacaatgcataatatatgcaaggtccggggtttaaaccccggccacc 444482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 8881298 - 8881344
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||  |||||||||| ||||||||    
T  8881298 gacaatgcataatatatgcaaggtccagggttcaaaccccggccacc 8881344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 11709009 - 11709055
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| ||||||| ||||||||| || |||||    
T  11709009 gacaatgcataatatatgcaaggtccgaagttcaaaccccgaccacc 11709055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 13449831 - 13449789
Alignment:
Q  316 atgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||  || ||||||||||||||||||||||    
T  13449831 atgcataatatatgcaaagttcgaggttcaaacctcggccacc 13449789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 13575312 - 13575358
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||| ||||||| | |||||||||| |||||||||||||    
T  13575312 gacaatgcataacatatgcaagttccgaggttcgaacctcggccacc 13575358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 17704036 - 17704082
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| | | |||||||||||||||||    
T  17704036 gacaatgcataatatatgcaaggtctgtgattcaaacctcggccacc 17704082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 24838208 - 24838162
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||| ||||||| |||||| |||||||||| ||||||||    
T  24838208 gacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 24838162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 9241039 - 9241084
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| | ||||||| ||||||||| ||||||||    
T  9241039 acaatgcataatatatgtaaggtccgatgttcaaaccccggccacc 9241084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 19260616 - 19260571
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| | |||||| |||||||||| ||||||||    
T  19260616 acaatgcataatatatgtaaggtccggggttcaaaccccggccacc 19260571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 7553702 - 7553738
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaac 348  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  7553702 gacaatgcataatatatgcaaggtccaaggttcaaac 7553738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 33105415 - 33105451
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  33105415 acaatgcataatatatgcaaggtccggggttcaaacc 33105451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 35102703 - 35102659
Alignment:
Q  314 caatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||| | |||||||||| |||||||| ||||    
T  35102703 caatgcataatatatgcaagatccgaggttcgaacctcgggcacc 35102659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 33824904 - 33824950
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  33824904 gacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 33824950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 8569732 - 8569778
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  8569732 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 8569778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 16390452 - 16390498
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||    
T  16390452 gacaatgcataatatatgtaaggtccggggttcaaacctcggccacc 16390498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 8637475 - 8637438
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8637475 gacaatgcataatatatgcaaggtccgaggttcaaacc 8637438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 15187087 - 15187132
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||    
T  15187087 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccacc 15187132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 15473519 - 15473474
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||    
T  15473519 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccacc 15473474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 31971552 - 31971589
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||||||||||||||    
T  31971552 gacaatgcataatatatgcaaggtccgaggttcaaacc 31971589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 655788 - 655742
Alignment:
Q  311 cgacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    ||||||||||||||||||||| |||||| ||||| |||| |||||||    
T  655788 cgacaatgcataatatatgcaaggtccggggttcgaaccccggccac 655742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 1918496 - 1918450
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||||||||| ||| || ||||||    
T  1918496 gacaatgcataatatatgcaaggtccgaggttcgaacatcagccacc 1918450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 3358414 - 3358460
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||||  |||||||||||||||| | ||||||    
T  3358414 gacaatgcataatatatgcaaagtccgaggttcaaaccacagccacc 3358460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 3808156 - 3808110
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||||| |||||||| | ||||||    
T  3808156 gacaatgcataatatatgcaaggtccgagattcaaaccccagccacc 3808110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 8629734 - 8629688
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| ||| || ||||||||||||| |||||    
T  8629734 gacaatgcataatatatgcaaggttcggggttcaaacctcgaccacc 8629688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 17151259 - 17151305
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||| ||||||||||||| |||| | |||||||||||||||||||    
T  17151259 gacaatacataatatatgcaaggtctggggttcaaacctcggccacc 17151305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 29740505 - 29740551
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||| ||| |||||| |||||||||| ||||||||    
T  29740505 gacaatgcataatatacgcaaggtccggggttcaaaccccggccacc 29740551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 17113497 - 17113452
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| |||| ||||||||||| ||| |||||    
T  17113497 acaatgcataatatatgcaaggtctgaggttcaaacttcgaccacc 17113452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 34701171 - 34701216
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| |||| |||||||||||  ||||||||    
T  34701171 acaatgcataatatatgcaaggtctgaggttcaaactccggccacc 34701216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 8809330 - 8809366
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||| | |||||||||||||||    
T  8809330 acaatgcataatatatgcaagatccgaggttcaaacc 8809366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 28758327 - 28758291
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||  ||||||||||||||||    
T  28758327 acaatgcataatatatgcaaagtccgaggttcaaacc 28758291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 33976267 - 33976311
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    |||||||||||| ||||||| |||||| |||||||||| ||||||    
T  33976267 gacaatgcataaaatatgcaaggtccggggttcaaaccccggcca 33976311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 7230303 - 7230349
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  7230303 gacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 7230349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 56551630 - 56551584
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  56551630 gacaatgcataatatatgcaaggtccgaggttcaaaccccggccacc 56551584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 9783922 - 9783968
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||    
T  9783922 gacaatgcataatatatgtaaggtctgaggttcaaacctcggccacc 9783968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 43034380 - 43034334
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||    
T  43034380 gacaatgcataatatatgcaaggtctgaggttcaaaccccggccacc 43034334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 49042019 - 49041973
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  49042019 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 49041973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 21623457 - 21623413
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||    
T  21623457 gacaatgcataatatatgcaaggtctgaggtttaaacctcggcca 21623413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 281614 - 281660
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||| | |||||| |||||||||||||| ||||    
T  281614 gacaatgcataatatatgaaaggtccggggttcaaacctcggacacc 281660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 11198351 - 11198397
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||| |||||||||||||| |||||| |||||||||| ||||||||    
T  11198351 gacaaggcataatatatgcaaggtccggggttcaaaccccggccacc 11198397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 11949801 - 11949755
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| || |||||    
T  11949801 gacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 11949755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 12322696 - 12322742
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| | |||| |||||||||||| ||||||    
T  12322696 gacaatgcataatatatgcaagttccggggttcaaacctcagccacc 12322742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 16304136 - 16304090
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| | |||||||| ||||||||    
T  16304136 gacaatgcataatatatgcaaggtccgggattcaaaccgcggccacc 16304090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 19908715 - 19908761
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||||||||| |||| || |||||    
T  19908715 gacaatgcataatatatgcaaggtccgaggttcgaaccccgaccacc 19908761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 22630398 - 22630352
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| |||||||||||| || |||||    
T  22630398 gacaatgcataatatatgcaaggtctgaggttcaaaccccgaccacc 22630352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 27871416 - 27871370
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||| |||||||||||| |||||||||||||||| || ||||||    
T  27871416 gacaatgtataatatatgcaaggtccgaggttcaaacttcagccacc 27871370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 354
Target Start/End: Complemental strand, 31139031 - 31138989
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggc 354  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||    
T  31139031 gacaatgcataaaatatgcaaggtccgaggttcaaaccccggc 31138989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 43782343 - 43782297
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| | ||||||||||||| |||||    
T  43782343 gacaatgcataatatatgcaaggtctgcggttcaaacctcgaccacc 43782297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 50362177 - 50362131
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||  ||||||||||| |||||||    
T  50362177 gacaatgcataatatatgcaaggtccagggttcaaaccttggccacc 50362131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 675941 - 675978
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  675941 gacaatgcataatatatgcaaggtccggggttcaaacc 675978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 3936651 - 3936696
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| |||||| ||||| |||| ||||||||    
T  3936651 acaatgcataatatatgcaaggtccggggttcgaaccccggccacc 3936696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 19479514 - 19479469
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| |||||| |||||||||| || |||||    
T  19479514 acaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19479469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 20383511 - 20383548
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  20383511 gacaatgcataatatatgcaaggtccggggttcaaacc 20383548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 20799432 - 20799395
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  20799432 gacaatgcataatatatgcaaggtccggggttcaaacc 20799395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 37735812 - 37735857
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||||||||| | |||| ||||||||||||||| ||||    
T  37735812 gacaatgcataatatatgtaaggtctgaggttcaaacctcgaccac 37735857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 37930884 - 37930839
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| |||| |||||||||||| || |||||    
T  37930884 acaatgcataatatatgcaaggtctgaggttcaaaccccgaccacc 37930839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 42344655 - 42344610
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||| |||||||||||| |||||||||||||||| ||| |||||    
T  42344655 acaatgtataatatatgcaaggtccgaggttcaaacatcgaccacc 42344610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 49953441 - 49953400
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcgg 353  Q
    |||||||||||||||||||| |||||| ||||||||| ||||    
T  49953441 gacaatgcataatatatgcaaggtccggggttcaaacttcgg 49953400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 54857652 - 54857607
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||| ||||||| |||||| |||||||||| ||||||||    
T  54857652 acaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 54857607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 56204970 - 56205014
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||    
T  56204970 gacaatgcataatatatgcaaggtccg-gattcaaacctcggccac 56205014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 836273 - 836237
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaac 348  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  836273 gacaatgcaaaatatatgcaaggtccgaggttcaaac 836237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 1701635 - 1701671
Alignment:
Q  315 aatgcataatatatgcagggtccgaggttcaaacctc 351  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  1701635 aatgcataatatatgcaaggtccgaggttcgaacctc 1701671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 8138374 - 8138318
Alignment:
Q  50 aagaggaaatgagagtgtaattcaatcttctctaaggggagggg-gtgtaatttact 105  Q
    ||||||||| | | ||||||||||| ||||||| |||||||||| ||||||||||||    
T  8138374 aagaggaaaggggtgtgtaattcaagcttctcttaggggaggggagtgtaatttact 8138318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 17423215 - 17423179
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaac 348  Q
    |||||||||||||||||||| |||||| |||||||||    
T  17423215 gacaatgcataatatatgcaaggtccggggttcaaac 17423179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 348
Target Start/End: Original strand, 23160063 - 23160099
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaac 348  Q
    |||||||||||||||||| | ||||||||||||||||    
T  23160063 gacaatgcataatatatgtaaggtccgaggttcaaac 23160099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 25783487 - 25783451
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaac 348  Q
    |||||||||||||||||||| |||||| |||||||||    
T  25783487 gacaatgcataatatatgcaaggtccggggttcaaac 25783451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 25978340 - 25978372
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttc 344  Q
    |||||||||||||||||||| ||||||||||||    
T  25978340 gacaatgcataatatatgcaaggtccgaggttc 25978372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 29908079 - 29908119
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcg 352  Q
    |||||||||||||||||||| ||||||  ||||||||||||    
T  29908079 gacaatgcataatatatgcaaggtccggagttcaaacctcg 29908119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 30848020 - 30847984
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaac 348  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  30848020 gacaatgcataaaatatgcaaggtccgaggttcaaac 30847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 358
Target Start/End: Original strand, 34042265 - 34042309
Alignment:
Q  314 caatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||| ||| || ||||||||||||| |||||    
T  34042265 caatgcataatatatgcaaggttcggggttcaaacctcgaccacc 34042309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 40071005 - 40070969
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  40071005 acaatgcataatatatgcaaggtccgaagttcaaacc 40070969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 47806208 - 47806168
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcg 352  Q
    ||||||||||||||||| || ||||||| ||||||||||||    
T  47806208 gacaatgcataatatatacaaggtccgatgttcaaacctcg 47806168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 34521228 - 34521182
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||    
T  34521228 gacaatgcataatatatgcaaggtccggggttcaaacctcggccacc 34521182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 315 - 358
Target Start/End: Original strand, 34595898 - 34595941
Alignment:
Q  315 aatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  34595898 aatgcataatatatgcaaggtccggggttcaaacctcggccacc 34595941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 6000181 - 6000135
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  6000181 gacaatgcataatatatgcaaggtccgaggttcaaaccccggacacc 6000135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 26755639 - 26755683
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||    
T  26755639 gacaatgcattatatatgcaaggtccggggttcaaacctcggcca 26755683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 1794619 - 1794665
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| | |||| ||||||||||||| |||||    
T  1794619 gacaatgcataatatatgcaagatccggggttcaaacctcgaccacc 1794665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 8736458 - 8736504
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||| ||||||| |||||| |||||||||| ||||||||    
T  8736458 gacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 8736504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 16967232 - 16967186
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| ||| ||||||||||||  ||||||||    
T  16967232 gacaatgcataatatatgcaaggttcgaggttcaaactccggccacc 16967186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 354
Target Start/End: Original strand, 25532996 - 25533038
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggc 354  Q
    |||||||||||||||||||| |||||| |||||||||| ||||    
T  25532996 gacaatgcataatatatgcaaggtccggggttcaaaccccggc 25533038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 354
Target Start/End: Original strand, 29739360 - 29739402
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggc 354  Q
    |||||||||||| ||||||| |||||| |||||||||||||||    
T  29739360 gacaatgcataaaatatgcaaggtccggggttcaaacctcggc 29739402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 33020081 - 33020035
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| |||||||||||| | ||||||    
T  33020081 gacaatgcataatatatgcaaggtctgaggttcaaaccccagccacc 33020035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 41973278 - 41973324
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| ||||| |||| ||||||||    
T  41973278 gacaatgcataatatatgcaaggtccggggttcgaaccccggccacc 41973324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 46707895 - 46707941
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| | |||| ||||||||| |||||||||    
T  46707895 gacaatgcataatatatgcaagttccggggttcaaacatcggccacc 46707941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 8780799 - 8780840
Alignment:
Q  317 tgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||| ||||||||||| |||||||||||||||||| ||||    
T  8780799 tgcatattatatgcaggggccgaggttcaaacctcggacacc 8780840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 10654485 - 10654448
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  10654485 gacaatgcataatatatgcaaggtccgtggttcaaacc 10654448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 13054896 - 13054941
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||||||||||| |||| ||||||| ||||||| ||||    
T  13054896 gacaatgcataatatatgcaaggtcggaggttcgaacctcgaccac 13054941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 22335381 - 22335418
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  22335381 gacaatgcataatatatgcaaggtctgaggttcaaacc 22335418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 32950798 - 32950753
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| ||||||  |||||||||||| |||||    
T  32950798 acaatgcataatatatgcaaggtccggagttcaaacctcgaccacc 32950753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 33153918 - 33153881
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||| | |||||||||||||||||    
T  33153918 gacaatgcataatatatgtaaggtccgaggttcaaacc 33153881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 12269021 - 12268985
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  12269021 acaatgcataatatatgcaaggtccggggttcaaacc 12268985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 17221557 - 17221521
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  17221557 acaatgcataatatatgcaaggtccgaggttcgaacc 17221521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 27462474 - 27462428
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  27462474 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 27462428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 10326978 - 10327022
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  10326978 acaatgcataatatatgcaaggtcc-aggttcaaacctcggccacc 10327022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 7670458 - 7670502
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||    
T  7670458 acaatgcataatatatgcaaggtccggggttcaaacctcgaccac 7670502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 358
Target Start/End: Complemental strand, 42219418 - 42219379
Alignment:
Q  319 cataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  42219418 cataatatatgcaaggtccgaggttcaaacatcggccacc 42219379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 8237670 - 8237624
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| ||  |||||||||||||||| ||||||||    
T  8237670 gacaatgcataatatatacaaagtccgaggttcaaaccccggccacc 8237624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 10244750 - 10244795
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  10244750 gacaatgcataatatatgcaaggtccggggttcaaacc-cggccacc 10244795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 16577898 - 16577852
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||| ||||||||||||| |||| | |||||||||||||||||||    
T  16577898 gacaatacataatatatgcaaggtctggggttcaaacctcggccacc 16577852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 16587764 - 16587810
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||| ||||||||||||| |||| | |||||||||||||||||||    
T  16587764 gacaatacataatatatgcaaggtctggggttcaaacctcggccacc 16587810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 19416537 - 19416583
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||| ||||||| |||||| |||||||||| ||||||||    
T  19416537 gacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 19416583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 19599168 - 19599214
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| || |||||    
T  19599168 gacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 19988730 - 19988688
Alignment:
Q  315 aatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    ||||||||||||||||| |||||| |||| |||||||||||||    
T  19988730 aatgcataatatatgcaaggtccgtggtttaaacctcggccac 19988688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 42095977 - 42095935
Alignment:
Q  316 atgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||| |||||| |||||||||||| ||||||    
T  42095977 atgcataatatatgcaaggtccggggttcaaacctctgccacc 42095935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 18714471 - 18714508
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  18714471 gacaatgcataatatatgcaaggtccggggttcaaacc 18714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 19626563 - 19626518
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||||||||||| |||||| |||||||||  |||||||    
T  19626563 gacaatgcataatatatgcaaggtccggggttcaaacaccggccac 19626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 20085797 - 20085760
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  20085797 gacaatgcataatatatgcaaggtccggggttcaaacc 20085760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 28736671 - 28736634
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  28736671 gacaatgcatgatatatgcaaggtccgaggttcaaacc 28736634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 46737808 - 46737853
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||||||||||| |||||| |||||||||  |||||||    
T  46737808 gacaatgcataatatatgcaaggtccggggttcaaacaccggccac 46737853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 1079729 - 1079685
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    ||||||||||| ||||||| |||||| |||||||| |||||||||    
T  1079729 acaatgcataaaatatgcaaggtccggggttcaaatctcggccac 1079685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 2512338 - 2512378
Alignment:
Q  318 gcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||| ||| ||||||||||||| ||||||||    
T  2512338 gcataatatatgcaaggtacgaggttcaaaccccggccacc 2512378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 22522839 - 22522793
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  22522839 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 22522793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 25979867 - 25979913
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||    
T  25979867 gacaatgcataatgtatgcaaggtccggggttcaaacctcggccacc 25979913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 40715987 - 40715941
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  40715987 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 40715941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 42473918 - 42473962
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||    
T  42473918 acaatgcataatatatgcaaggtccggggttcaaaccacggccac 42473962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 3052302 - 3052348
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||| |||||||||||| ||| |||||||||||||||| |||||    
T  3052302 gacaatgtataatatatgcaaggttcgaggttcaaacctcgaccacc 3052348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 6489030 - 6489076
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||    
T  6489030 gacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 6489076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 6624799 - 6624845
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| ||||| |||| ||||||||    
T  6624799 gacaatgcataatatatgcaaggtccggggttcgaaccccggccacc 6624845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 18391623 - 18391669
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||| ||||||| |||||||||||| ||||||| |||||    
T  18391623 gacaatgcataaaatatgcaaggtccgaggttcgaacctcgaccacc 18391669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 354
Target Start/End: Original strand, 18557877 - 18557919
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggc 354  Q
    ||||||||||||||| |||| |||||||| |||||||||||||    
T  18557877 gacaatgcataatatgtgcaaggtccgagattcaaacctcggc 18557919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 23218983 - 23219029
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||| |||| ||||||| |||||||||||||||| |||||||||    
T  23218983 gacaatgtataaaatatgcaaggtccgaggttcaaacttcggccacc 23219029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 25509334 - 25509380
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||  ||||||| |||||||||||| |||||||||||||    
T  25509334 gacaatgcatataatatgcaaggtccgaggttcgaacctcggccacc 25509380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 30893956 - 30894002
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||  |||||||||||||||| ||||    
T  30893956 gacaatgcataatatatgcaaggtatgaggttcaaacctcggacacc 30894002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 37614465 - 37614419
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||| |||||||||||||| ||| |||||||||||| |||||||||    
T  37614465 gacaacgcataatatatgcaaggttcgaggttcaaacttcggccacc 37614419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 42817150 - 42817104
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||| || |||||| ||||||||||||| |||||    
T  42817150 gacaatgcataatatatacaaggtccggggttcaaacctcgaccacc 42817104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 10531563 - 10531600
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  10531563 gacaatgcataatatatgcacggtccgtggttcaaacc 10531600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 34191456 - 34191501
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||| ||||||| |||||| |||||||||| |||||||    
T  34191456 gacaatgcataaaatatgcaaggtccggggttcaaaccccggccac 34191501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 1406258 - 1406314
Alignment:
Q  50 aagaggaaatgagagtgtaattcaatcttctctaaggggagggg-gtgtaatttact 105  Q
    ||||||| ||||||||||||||||| ||||||| || | ||||| ||||||||||||    
T  1406258 aagaggagatgagagtgtaattcaagcttctcttagagaaggggagtgtaatttact 1406314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 16133103 - 16133059
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    |||||||||||||||||||| |||| |||||| ||||| ||||||    
T  16133103 gacaatgcataatatatgcaaggtcagaggtttaaaccccggcca 16133059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 16579411 - 16579375
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  16579411 acaatgcataatatatgcaaggtccgtggttcaaacc 16579375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 40446006 - 40446046
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcg 352  Q
    |||||||||||||||||||| |||| |||||||||| ||||    
T  40446006 gacaatgcataatatatgcaaggtctgaggttcaaatctcg 40446046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 8075808 - 8075854
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||    
T  8075808 gacaatgcataatatatgcaaggtctgaggttcaaaccccggccacc 8075854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 38130997 - 38130951
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  38130997 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 38130951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 39100121 - 39100075
Alignment:
Q  313 acaatgcataatatatgcagggtccga-ggttcaaacctcggccacc 358  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  39100121 acaatgcataatatatgcaaggtccgatggttcaaacctcggccacc 39100075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 48849801 - 48849755
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||    
T  48849801 gacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 48849755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 913636 - 913592
Alignment:
Q  314 caatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||| |||||| |||||||||||| ||||||    
T  913636 caatgcataatatatgcaaggtccggggttcaaacctctgccacc 913592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 48656937 - 48656893
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggcca 356  Q
    |||||||||||||||||||| |||||| |||||||||||| ||||    
T  48656937 gacaatgcataatatatgcaaggtccggggttcaaacctcagcca 48656893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 1456578 - 1456532
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||| |||||||||||| |||| |||||||||| ||||||||||    
T  1456578 gacaatgtataatatatgcaaggtctgaggttcaaaactcggccacc 1456532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 3755362 - 3755408
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||  |||| ||||||||||||||    
T  3755362 gacaatgcataatatatgcaaggtccagggtttaaacctcggccacc 3755408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 4601867 - 4601913
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||| ||||| |||||| |||||||||| ||||||||    
T  4601867 gacaatgcataataaatgcaaggtccggggttcaaaccccggccacc 4601913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 5349551 - 5349597
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||| ||||||||| |||||||||||||||||  |||||||    
T  5349551 gacaatgcattatatatgcaaggtccgaggttcaaaccctggccacc 5349597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 18870763 - 18870717
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||  | |||||||||||||||||    
T  18870763 gacaatgcataatatatgcaaggtccatgattcaaacctcggccacc 18870717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 22799764 - 22799718
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||| | ||||| |||||||||||||||||||| |||||    
T  22799764 gacaatgcataaaacatgcaaggtccgaggttcaaacctcgaccacc 22799718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 25340962 - 25340916
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||| ||||||| |||||| |||||||||| ||||||||    
T  25340962 gacaatgcataaaatatgcaaggtccggggttcaaaccccggccacc 25340916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 25441538 - 25441492
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||    
T  25441538 gacaatgcataatatatgcaaggtctggggttcaaaccccggccacc 25441492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 34899120 - 34899166
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| |||||||||| || |||||    
T  34899120 gacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 34899166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 35863851 - 35863805
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||| ||||||||||||| |||| | |||||||||||||||||||    
T  35863851 gacaatacataatatatgcaaggtctggggttcaaacctcggccacc 35863805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 45431971 - 45432017
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||||||||||||||| |||||| ||||||||||  |||||||    
T  45431971 gacaatgcataatatatgcaaggtccggggttcaaaccctggccacc 45432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 52453295 - 52453249
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||||||||  || |||||||||||||||| |||||    
T  52453295 gacaatgcataatatatgcaaagttcgaggttcaaacctcgtccacc 52453249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 20018220 - 20018265
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||| ||||||| |||| | ||||||||||||||||||    
T  20018220 gacaatgcataaaatatgcaaggtctggggttcaaacctcggccac 20018265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 22722426 - 22722471
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||    
T  22722426 acaatgcataaaatatgcaaggtccgaggttcaaaccccgaccacc 22722471  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 24428511 - 24428474
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  24428511 gacaatgcataatatatgcaaagtccgaggttcaaacc 24428474  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 38034847 - 38034802
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||| ||||| ||||||| |||||| ||||||||||||||||||    
T  38034847 gacaatacataaaatatgcaaggtccggggttcaaacctcggccac 38034802  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 41817522 - 41817559
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  41817522 gacaatgcataatatatgcaaggtccggggttcaaacc 41817559  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 42886547 - 42886502
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggccac 357  Q
    |||||||||||| ||||||| ||| || ||||||||||||||||||    
T  42886547 gacaatgcataaaatatgcaaggttcggggttcaaacctcggccac 42886502  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 45885510 - 45885469
Alignment:
Q  317 tgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    ||||||||||||||| |||| |||||||||||| ||||||||    
T  45885510 tgcataatatatgcaaggtctgaggttcaaaccccggccacc 45885469  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 11358255 - 11358303
Alignment:
Q  310 gcgacaatgcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||||| ||||||||||||| | |||| |||||||||| ||||||||    
T  11358255 gcgacaattcataatatatgcaagatccggggttcaaaccccggccacc 11358303  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 35210163 - 35210123
Alignment:
Q  318 gcataatatatgcagggtccgaggttcaaacctcggccacc 358  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  35210163 gcataaaatatgcaaggtccggggttcaaacctcggccacc 35210123  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 47536518 - 47536482
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaac 348  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  47536518 gacaatgcataaaatatgcaaggtccgaggttcaaac 47536482  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 48842056 - 48842100
Alignment:
Q  62 gagtgtaattcaatcttctctaaggggagggg-gtgtaatttact 105  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||    
T  48842056 gagtgtaattcaatcatctttaaggggaggggagtgtaatttact 48842100  T

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Target: scaffold1694 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1694
Description:

Target: scaffold1694; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 354
Target Start/End: Original strand, 178 - 220
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcggc 354  Q
    ||||||||||||| |||||| |||| |||||||||||||||||    
T  178 gacaatgcataatgtatgcaaggtctgaggttcaaacctcggc 220  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 223714 - 223676
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacctc 351  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  223714 acaatgcataatatatgcatggtccgaagttcaaacctc 223676  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 5205 - 5242
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  5205 gacaatgcataatatatgcaaggtctgaggttcaaacc 5242  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 40021 - 40062
Alignment:
Q  312 gacaatgcataatatatgcagggtccgaggttcaaacctcgg 353  Q
    |||||||||||||||||||| |||  ||||||||||||||||    
T  40021 gacaatgcataatatatgcaaggttagaggttcaaacctcgg 40062  T

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Target: scaffold1127 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 1202 - 1166
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  1202 acaatgcataatatatgcaaggtccggggttcaaacc 1166  T

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Target: scaffold0160 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 22935 - 22971
Alignment:
Q  313 acaatgcataatatatgcagggtccgaggttcaaacc 349  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  22935 acaatgcataaaatatgcaaggtccgaggttcaaacc 22971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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