View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3882_high_15 (Length: 237)
Name: NF3882_high_15
Description: NF3882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3882_high_15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 12418259 - 12418479
Alignment:
| Q |
17 |
agctagcagccatataatctcaaacaccaatcaacaacacataataggaaacatcctaacatacatttgaatacatgcctgttttagcttatccaagaca |
116 |
Q |
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| T |
12418259 |
agctagcagccatataatctcaaacaccaatcaacaacacataataggaaacatcctaacatacatttgaatacatgcctgttttagcttatccaagaca |
12418358 |
T |
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| Q |
117 |
tcagtatagaaaaatgcatgattaattcaaatagaactggtttacaaaattttcctgcagaaaaaatagagg-aattttaccatatttcaacctccaaaa |
215 |
Q |
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| T |
12418359 |
tcagtatagaaaaatgcatgattaattcaaatagaactggtttacaaaattttcctgcagaaaaaatagaggaaattttaccata-ttgaacctccaaaa |
12418457 |
T |
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| Q |
216 |
gacctttagattcaacaagtgg |
237 |
Q |
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|||||||||||||||||||||| |
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| T |
12418458 |
gacctttagattcaacaagtgg |
12418479 |
T |
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