View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3884_high_5 (Length: 451)

Name: NF3884_high_5
Description: NF3884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3884_high_5
NF3884_high_5
[»] chr2 (55 HSPs)
chr2 (13-451)||(37737986-37738425)
chr2 (25-394)||(27708144-27708513)
chr2 (159-381)||(39117324-39117545)
chr2 (158-381)||(9840671-9840893)
chr2 (103-381)||(30505565-30505842)
chr2 (262-381)||(18766679-18766797)
chr2 (186-346)||(44735982-44736141)
chr2 (255-381)||(27009200-27009325)
chr2 (250-378)||(35590220-35590347)
chr2 (198-381)||(33645808-33645990)
chr2 (401-451)||(9647144-9647194)
chr2 (401-443)||(27695975-27696017)
chr2 (400-451)||(24727425-24727477)
chr2 (401-451)||(6646835-6646886)
chr2 (405-451)||(10060443-10060489)
chr2 (252-381)||(36176614-36176741)
chr2 (401-449)||(3012856-3012905)
chr2 (397-433)||(22888860-22888896)
chr2 (401-437)||(27490765-27490801)
chr2 (404-451)||(32972915-32972963)
chr2 (401-451)||(2971823-2971874)
chr2 (397-451)||(7121386-7121441)
chr2 (162-217)||(18948704-18948759)
chr2 (308-367)||(24739871-24739930)
chr2 (401-451)||(28013967-28014018)
chr2 (401-451)||(29795447-29795498)
chr2 (401-451)||(33737342-33737393)
chr2 (401-451)||(42081048-42081099)
chr2 (401-451)||(42678761-42678812)
chr2 (401-451)||(4263873-4263923)
chr2 (399-437)||(9760015-9760053)
chr2 (402-451)||(23352913-23352963)
chr2 (392-426)||(37631246-37631280)
chr2 (398-447)||(45202145-45202195)
chr2 (308-353)||(841548-841593)
chr2 (174-219)||(5589526-5589571)
chr2 (401-451)||(6049353-6049405)
chr2 (404-437)||(8848730-8848763)
chr2 (395-451)||(24361499-24361553)
chr2 (175-220)||(35590145-35590190)
chr2 (252-289)||(38332109-38332146)
chr2 (333-381)||(2167484-2167532)
chr2 (401-437)||(6511251-6511287)
chr2 (404-447)||(11828833-11828877)
chr2 (168-220)||(12606776-12606828)
chr2 (393-451)||(15141464-15141524)
chr2 (402-446)||(17999691-17999735)
chr2 (401-437)||(18254244-18254280)
chr2 (400-451)||(25801822-25801874)
chr2 (401-448)||(27329121-27329169)
chr2 (400-451)||(27538925-27538977)
chr2 (401-437)||(30831756-30831792)
chr2 (249-381)||(31640235-31640366)
chr2 (309-353)||(40426926-40426970)
chr2 (401-437)||(41042254-41042290)
[»] chr1 (65 HSPs)
chr1 (25-381)||(34703454-34703809)
chr1 (174-380)||(36098593-36098798)
chr1 (167-381)||(44675009-44675222)
chr1 (255-381)||(4889452-4889577)
chr1 (192-377)||(10686161-10686345)
chr1 (251-356)||(6723708-6723812)
chr1 (252-350)||(12688177-12688274)
chr1 (401-451)||(48103398-48103448)
chr1 (174-219)||(46271933-46271978)
chr1 (400-451)||(40139125-40139177)
chr1 (400-451)||(41507203-41507255)
chr1 (401-451)||(8200087-8200138)
chr1 (401-451)||(33358167-33358218)
chr1 (401-451)||(40596063-40596114)
chr1 (174-221)||(44889202-44889249)
chr1 (401-451)||(45272169-45272220)
chr1 (401-451)||(48220152-48220203)
chr1 (401-451)||(50781578-50781629)
chr1 (402-451)||(19969570-19969620)
chr1 (402-451)||(45065910-45065960)
chr1 (400-451)||(51718635-51718688)
chr1 (176-221)||(10252146-10252191)
chr1 (397-437)||(3159372-3159412)
chr1 (401-437)||(15083085-15083121)
chr1 (400-451)||(16252768-16252820)
chr1 (400-451)||(18336157-18336209)
chr1 (401-448)||(43612092-43612140)
chr1 (401-451)||(27687528-27687579)
chr1 (401-451)||(30414875-30414926)
chr1 (174-217)||(33134295-33134338)
chr1 (399-449)||(35030773-35030824)
chr1 (174-217)||(42476236-42476279)
chr1 (401-451)||(44632540-44632591)
chr1 (401-451)||(46903481-46903532)
chr1 (401-451)||(49241513-49241564)
chr1 (401-451)||(49453491-49453542)
chr1 (401-451)||(50797791-50797842)
chr1 (401-446)||(4857922-4857968)
chr1 (394-451)||(5477172-5477230)
chr1 (394-451)||(5975541-5975599)
chr1 (259-381)||(25392294-25392415)
chr1 (398-451)||(36494472-36494526)
chr1 (401-451)||(36954671-36954720)
chr1 (400-445)||(48872043-48872089)
chr1 (402-451)||(50460721-50460771)
chr1 (397-443)||(51080107-51080153)
chr1 (402-447)||(51571416-51571462)
chr1 (256-365)||(17128488-17128596)
chr1 (168-221)||(26260666-26260719)
chr1 (174-219)||(27099720-27099765)
chr1 (400-437)||(37685330-37685367)
chr1 (400-437)||(37700151-37700188)
chr1 (401-437)||(2571635-2571671)
chr1 (174-214)||(2653861-2653901)
chr1 (401-437)||(8350231-8350267)
chr1 (400-451)||(16836124-16836176)
chr1 (336-372)||(27363736-27363772)
chr1 (400-451)||(31433501-31433553)
chr1 (400-451)||(32319317-32319369)
chr1 (401-437)||(33100808-33100844)
chr1 (391-427)||(40439885-40439921)
chr1 (159-219)||(40708576-40708636)
chr1 (401-437)||(44519186-44519222)
chr1 (399-427)||(47642652-47642680)
chr1 (174-274)||(48610880-48610980)
[»] chr4 (71 HSPs)
chr4 (196-394)||(29969787-29969985)
chr4 (159-377)||(20510299-20510516)
chr4 (252-381)||(30972360-30972488)
chr4 (250-381)||(27269978-27270108)
chr4 (250-381)||(21204870-21205000)
chr4 (107-305)||(22653141-22653338)
chr4 (401-451)||(39605979-39606029)
chr4 (250-353)||(9831381-9831483)
chr4 (250-365)||(37772909-37773023)
chr4 (402-451)||(5386385-5386435)
chr4 (401-451)||(46686245-46686295)
chr4 (400-451)||(24310530-24310582)
chr4 (167-214)||(8813914-8813961)
chr4 (255-350)||(25130444-25130538)
chr4 (401-451)||(28657449-28657500)
chr4 (401-451)||(31657658-31657709)
chr4 (401-451)||(42490920-42490971)
chr4 (401-451)||(43769723-43769774)
chr4 (260-375)||(48336967-48337081)
chr4 (174-220)||(5634773-5634819)
chr4 (394-451)||(26718373-26718431)
chr4 (394-451)||(26731001-26731059)
chr4 (398-451)||(39241310-39241364)
chr4 (174-364)||(43001630-43001819)
chr4 (308-353)||(10552692-10552737)
chr4 (399-451)||(17683357-17683410)
chr4 (398-451)||(50608633-50608686)
chr4 (400-447)||(32365680-32365728)
chr4 (401-437)||(45082981-45083017)
chr4 (399-451)||(49906141-49906193)
chr4 (401-451)||(1868902-1868953)
chr4 (401-451)||(2109443-2109494)
chr4 (401-451)||(4511825-4511876)
chr4 (401-451)||(9827992-9828043)
chr4 (173-220)||(13609079-13609126)
chr4 (401-451)||(32621638-32621689)
chr4 (401-451)||(37731926-37731977)
chr4 (401-451)||(54036538-54036589)
chr4 (397-451)||(1580292-1580346)
chr4 (400-449)||(7795024-7795074)
chr4 (402-451)||(28676161-28676211)
chr4 (392-437)||(36177896-36177942)
chr4 (399-437)||(37997254-37997292)
chr4 (401-451)||(41347476-41347526)
chr4 (174-220)||(52577905-52577951)
chr4 (400-437)||(5622457-5622494)
chr4 (174-219)||(13157352-13157397)
chr4 (399-451)||(17683234-17683287)
chr4 (399-451)||(30778273-30778326)
chr4 (401-449)||(31413797-31413846)
chr4 (400-437)||(39440483-39440520)
chr4 (264-353)||(40153925-40154013)
chr4 (401-448)||(1840595-1840643)
chr4 (401-437)||(12706163-12706199)
chr4 (173-221)||(13137000-13137048)
chr4 (400-451)||(15515794-15515846)
chr4 (395-427)||(23220329-23220361)
chr4 (401-437)||(23369367-23369403)
chr4 (400-447)||(28899228-28899276)
chr4 (401-437)||(29531640-29531676)
chr4 (404-451)||(29974336-29974384)
chr4 (168-220)||(32807564-32807616)
chr4 (401-437)||(37297049-37297085)
chr4 (175-219)||(40435066-40435110)
chr4 (401-437)||(43174984-43175020)
chr4 (394-437)||(44925164-44925208)
chr4 (397-444)||(45143688-45143736)
chr4 (397-444)||(45152457-45152505)
chr4 (174-214)||(45637351-45637391)
chr4 (401-448)||(48494924-48494972)
chr4 (400-451)||(52851339-52851391)
[»] chr5 (38 HSPs)
chr5 (159-382)||(12831484-12831706)
chr5 (159-382)||(12863459-12863681)
chr5 (196-377)||(27482647-27482827)
chr5 (173-381)||(19314975-19315182)
chr5 (401-451)||(14923083-14923133)
chr5 (168-356)||(804395-804582)
chr5 (267-381)||(4396644-4396757)
chr5 (174-220)||(31124184-31124230)
chr5 (400-451)||(38036711-38036763)
chr5 (401-451)||(14206400-14206451)
chr5 (167-217)||(8487964-8488014)
chr5 (174-219)||(17971989-17972034)
chr5 (404-448)||(21210833-21210878)
chr5 (401-437)||(1274358-1274394)
chr5 (404-451)||(1839353-1839401)
chr5 (401-437)||(18660759-18660795)
chr5 (252-356)||(39839903-39840006)
chr5 (401-451)||(372729-372780)
chr5 (401-451)||(3640205-3640256)
chr5 (401-451)||(6865796-6865847)
chr5 (401-451)||(9226313-9226364)
chr5 (401-451)||(12203158-12203209)
chr5 (401-451)||(13734369-13734420)
chr5 (401-451)||(39458668-39458719)
chr5 (398-451)||(5386081-5386132)
chr5 (174-220)||(6612295-6612341)
chr5 (311-377)||(16610625-16610691)
chr5 (401-447)||(16972112-16972158)
chr5 (402-451)||(33910097-33910147)
chr5 (174-219)||(4926730-4926775)
chr5 (252-353)||(7961144-7961244)
chr5 (397-426)||(19824118-19824147)
chr5 (400-437)||(28306167-28306204)
chr5 (399-443)||(38387608-38387653)
chr5 (401-437)||(7076425-7076461)
chr5 (401-437)||(33037520-33037556)
chr5 (404-451)||(33567232-33567280)
chr5 (401-437)||(35634871-35634907)
[»] chr8 (36 HSPs)
chr8 (159-377)||(5048393-5048609)
chr8 (168-381)||(37929022-37929234)
chr8 (252-381)||(8462485-8462613)
chr8 (174-354)||(31686427-31686606)
chr8 (402-451)||(39211054-39211104)
chr8 (401-451)||(30439514-30439565)
chr8 (401-451)||(37392137-37392188)
chr8 (175-382)||(39435425-39435630)
chr8 (404-449)||(157070-157116)
chr8 (398-451)||(36675333-36675387)
chr8 (399-451)||(6243043-6243096)
chr8 (397-437)||(43397777-43397817)
chr8 (401-451)||(5740794-5740845)
chr8 (400-446)||(9047084-9047131)
chr8 (401-451)||(13924022-13924073)
chr8 (160-219)||(16840208-16840267)
chr8 (401-451)||(37657001-37657052)
chr8 (401-451)||(41541869-41541920)
chr8 (401-451)||(41776186-41776237)
chr8 (174-217)||(43776139-43776182)
chr8 (175-221)||(1590291-1590337)
chr8 (399-437)||(22719438-22719476)
chr8 (399-437)||(27325756-27325794)
chr8 (399-437)||(31249559-31249597)
chr8 (402-451)||(32954853-32954903)
chr8 (400-437)||(34018807-34018845)
chr8 (400-451)||(38174242-38174295)
chr8 (399-451)||(1796494-1796547)
chr8 (398-427)||(12284315-12284344)
chr8 (401-441)||(16487610-16487651)
chr8 (402-450)||(32020475-32020524)
chr8 (308-353)||(38685814-38685859)
chr8 (400-436)||(4054322-4054358)
chr8 (404-451)||(11138910-11138958)
chr8 (404-451)||(14710902-14710950)
chr8 (401-437)||(24479236-24479272)
[»] chr3 (48 HSPs)
chr3 (159-377)||(33692876-33693093)
chr3 (250-365)||(25845645-25845759)
chr3 (198-379)||(9601702-9601882)
chr3 (167-219)||(25408679-25408731)
chr3 (392-451)||(29846900-29846960)
chr3 (192-367)||(20017408-20017582)
chr3 (400-451)||(24256780-24256831)
chr3 (401-451)||(28700472-28700523)
chr3 (401-451)||(29057659-29057710)
chr3 (174-221)||(44781789-44781836)
chr3 (401-451)||(47683801-47683852)
chr3 (401-451)||(49761319-49761370)
chr3 (204-382)||(9609653-9609830)
chr3 (401-451)||(19149002-19149052)
chr3 (174-220)||(31050593-31050639)
chr3 (174-220)||(35503848-35503894)
chr3 (401-451)||(38957521-38957571)
chr3 (256-381)||(25408767-25408891)
chr3 (173-220)||(3857743-3857790)
chr3 (397-451)||(9753226-9753281)
chr3 (397-451)||(11234199-11234254)
chr3 (174-221)||(20848267-20848314)
chr3 (167-214)||(21408267-21408314)
chr3 (401-451)||(31300816-31300864)
chr3 (401-451)||(35368622-35368673)
chr3 (264-371)||(36803169-36803275)
chr3 (401-451)||(43169762-43169813)
chr3 (401-451)||(46952949-46953000)
chr3 (401-451)||(48490522-48490573)
chr3 (401-451)||(50745560-50745611)
chr3 (402-437)||(55151751-55151786)
chr3 (401-451)||(55361242-55361293)
chr3 (399-437)||(16969601-16969639)
chr3 (395-437)||(26014806-26014848)
chr3 (391-437)||(37453189-37453235)
chr3 (402-447)||(53871045-53871091)
chr3 (167-220)||(3694855-3694908)
chr3 (174-219)||(11452976-11453021)
chr3 (401-450)||(23553786-23553834)
chr3 (399-451)||(26548783-26548836)
chr3 (399-448)||(32205605-32205654)
chr3 (400-451)||(1337847-1337899)
chr3 (400-451)||(9719461-9719513)
chr3 (404-451)||(24645371-24645419)
chr3 (401-437)||(27541537-27541573)
chr3 (400-451)||(28884490-28884542)
chr3 (401-437)||(46623907-46623943)
chr3 (401-437)||(52939653-52939689)
[»] chr6 (38 HSPs)
chr6 (256-382)||(12688190-12688315)
chr6 (252-382)||(27105270-27105399)
chr6 (252-382)||(27147079-27147208)
chr6 (251-381)||(9907156-9907285)
chr6 (251-381)||(22469420-22469549)
chr6 (255-381)||(34714917-34715042)
chr6 (397-449)||(18737578-18737630)
chr6 (168-219)||(17292898-17292949)
chr6 (401-451)||(28748124-28748175)
chr6 (159-221)||(5667496-5667558)
chr6 (249-367)||(11324463-11324580)
chr6 (308-353)||(32533064-32533109)
chr6 (401-445)||(6110528-6110572)
chr6 (400-451)||(32644622-32644674)
chr6 (401-451)||(2060642-2060693)
chr6 (398-437)||(8098630-8098669)
chr6 (401-451)||(12427236-12427287)
chr6 (401-451)||(31517189-31517240)
chr6 (401-450)||(2165310-2165360)
chr6 (401-450)||(2176943-2176993)
chr6 (334-372)||(7824118-7824156)
chr6 (397-447)||(15974617-15974666)
chr6 (400-449)||(16121162-16121212)
chr6 (308-354)||(18672088-18672134)
chr6 (174-228)||(22732715-22732769)
chr6 (167-217)||(29599302-29599352)
chr6 (398-451)||(32135440-32135494)
chr6 (399-451)||(9395346-9395399)
chr6 (175-220)||(9907080-9907125)
chr6 (159-220)||(12688093-12688154)
chr6 (400-437)||(25811873-25811910)
chr6 (400-437)||(34047386-34047423)
chr6 (401-437)||(1156721-1156757)
chr6 (168-216)||(10303297-10303345)
chr6 (396-451)||(12177572-12177628)
chr6 (297-381)||(14001786-14001870)
chr6 (252-380)||(14215993-14216120)
chr6 (401-437)||(22079598-22079634)
[»] chr7 (48 HSPs)
chr7 (186-327)||(4997969-4998108)
chr7 (189-377)||(41529326-41529513)
chr7 (401-451)||(26749017-26749067)
chr7 (251-381)||(38153903-38154032)
chr7 (255-381)||(17116375-17116500)
chr7 (255-366)||(24563147-24563259)
chr7 (401-451)||(41989751-41989801)
chr7 (401-451)||(43942649-43942699)
chr7 (402-451)||(7817650-7817700)
chr7 (394-451)||(33465048-33465106)
chr7 (252-365)||(12092675-12092787)
chr7 (400-451)||(8459613-8459665)
chr7 (401-437)||(13152593-13152629)
chr7 (161-373)||(23710454-23710665)
chr7 (400-451)||(27866546-27866598)
chr7 (401-441)||(47391345-47391385)
chr7 (401-451)||(2323304-2323355)
chr7 (401-451)||(2469703-2469754)
chr7 (401-451)||(3937130-3937181)
chr7 (401-451)||(6822542-6822593)
chr7 (173-220)||(9628120-9628167)
chr7 (401-451)||(11352982-11353033)
chr7 (401-451)||(22330640-22330691)
chr7 (401-451)||(33224835-33224886)
chr7 (250-381)||(34237151-34237281)
chr7 (401-451)||(37351999-37352050)
chr7 (401-447)||(45420073-45420120)
chr7 (401-451)||(47078259-47078310)
chr7 (402-451)||(3062343-3062393)
chr7 (398-451)||(8742391-8742445)
chr7 (174-220)||(16560012-16560058)
chr7 (174-220)||(16605604-16605650)
chr7 (174-220)||(37237931-37237977)
chr7 (400-449)||(37848631-37848681)
chr7 (400-437)||(31329386-31329423)
chr7 (308-353)||(40616734-40616779)
chr7 (401-449)||(43444635-43444684)
chr7 (252-365)||(47543425-47543537)
chr7 (168-220)||(9490974-9491026)
chr7 (401-437)||(25192919-25192955)
chr7 (400-451)||(25272601-25272653)
chr7 (401-437)||(30941386-30941422)
chr7 (396-451)||(35293123-35293179)
chr7 (256-380)||(40347982-40348105)
chr7 (387-427)||(41538468-41538508)
chr7 (334-374)||(42017867-42017907)
chr7 (399-427)||(44189355-44189383)
chr7 (401-437)||(44895607-44895643)
[»] scaffold0047 (1 HSPs)
scaffold0047 (251-367)||(64273-64388)
[»] scaffold0204 (1 HSPs)
scaffold0204 (260-375)||(24489-24603)
[»] scaffold0054 (1 HSPs)
scaffold0054 (401-451)||(31609-31660)
[»] scaffold0100 (1 HSPs)
scaffold0100 (401-449)||(44786-44835)
[»] scaffold0225 (1 HSPs)
scaffold0225 (250-350)||(6502-6601)
[»] scaffold0155 (1 HSPs)
scaffold0155 (401-451)||(3280-3331)
[»] scaffold0286 (1 HSPs)
scaffold0286 (401-450)||(17049-17099)
[»] scaffold0020 (1 HSPs)
scaffold0020 (401-437)||(165473-165509)


Alignment Details
Target: chr2 (Bit Score: 392; Significance: 0; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 13 - 451
Target Start/End: Complemental strand, 37738425 - 37737986
Alignment:
Q  13 gtgatatgaatctacattgtaacttttttgggtttgtttgacatttaatttatgggtggttgggcatctctgcggtgccacctcagtttttgccagatta 112  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  37738425 gtgatatgagtctacattgtaacttttttgggtttgtttgacatttaatttatgggtggttgggcatctctgcagtgccacctcaggttttgccggatta 37738326  T
Q  113 ttttattcaattcagttatattggtagatcagaaaaggtttggaggtcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaaga 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37738325 ttttattcaattcagttatattggtagatcagaaaaggtttggaggccaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaaga 37738226  T
Q  213 aataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactact 312  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37738225 aataacagactatttatggataaaacatgctcgacacttcaggtggctgataagattaagtcgctcactttcatgtggcctgaaggcgaaattcactact 37738126  T
Q  313 cttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagtta-ttttgttctagttttaaattttgagaaatgata 411  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  37738125 cttccctttaactttcatggctggtggcttagtccgttcaccattttgggcataggctaatagttatttttgttctagttttaaattttgagaaatgata 37738026  T
Q  412 tttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37738025 tttgaacaaccattttcgacaactttctctctcatactca 37737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 25 - 394
Target Start/End: Complemental strand, 27708513 - 27708144
Alignment:
Q  25 tacattgtaacttttttgggtttgtttgacatttaatttatgggtggttgggcatctctgcggtgccacctcagtttttgccagattattttattcaatt 124  Q
    |||||||||| |||||||||||||| || |||||||||||| | ||||||||||| ||||||||    ||||||| | |||  ||| ||| |||||||||    
T  27708513 tacattgtaatttttttgggtttgtctgccatttaatttatagatggttgggcatttctgcggttgtccctcagtatatgctggatcattctattcaatt 27708414  T
Q  125 cagttatattggtagatcagaaaaggtttggaggtcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagacta 224  Q
    |||||||| |||| |  ||  ||| ||| |  ||||||||| ||||| ||| |||||| | ||  |||| ||||||||||||||||||||||||||| ||    
T  27708413 cagttatagtggtggtccaacaaaagttcgtcggtcaattttacaggttatatggttttctaccatctgagaaatctggaaagaaagaaataacagatta 27708314  T
Q  225 tttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaac 324  Q
    ||||  || |||||||| | |  | ||||||||||||||||||||||||||||| |||| | |||| || |||||||||||  ||||||||||||| ||     
T  27708313 tttacagacaaaacatgcttggtaattcaggtggttgataagattaagtcgctcgcttttacgtgg-ttaaaggcgaaatttgctactcttcccttcaat 27708215  T
Q  325 tttcattgctggtggcttagtccgttcaccattttgggcatagactaatagttattt-tgttctagtttta 394  Q
     ||||| | |||||||||| || ||||||| |  ||||||||| ||||||||||||| |||||| ||||||    
T  27708214 cttcatggttggtggcttaatctgttcaccgtactgggcataggctaatagttatttatgttcttgtttta 27708144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 159 - 381
Target Start/End: Original strand, 39117324 - 39117545
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtgg 258  Q
    ||||||| ||||| |||||||| ||| ||| | |||||||||||||||||||||||||||||  | ||||     ||| | || |||     ||||||||    
T  39117324 tcaattttacaggttatttggtatgctactatgtgggaaatctggaaagaaagaaataacaggttgtttaccatcaaatcttgctcggtgactcaggtgg 39117423  T
Q  259 ttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattt 358  Q
    | |||||||||||||| ||||| || |||||| |||| || |||||| ||||||||| |||| ||||| ||| |||||||||||||||||||||| || |    
T  39117424 tggataagattaagtccctcacatttatgtgg-ttgagggagaaatttactactctttccttcaacttacatggctggtggcttagtccgttcacaatgt 39117522  T
Q  359 tgggcatagactaatagttattt 381  Q
    ||| ||||| ||||| |||||||    
T  39117523 tggacataggctaattgttattt 39117545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 381
Target Start/End: Original strand, 9840671 - 9840893
Alignment:
Q  158 gtcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtg 257  Q
    |||||||| ||||| ||| |||||||| ||  | |||||||| ||||||||||||||||||||  |||| |   | ||| |||| |||  | |||| |||    
T  9840671 gtcaattttacaggttatatggtttgctaccatttgggaaatttggaaagaaagaaataacaggatattcacaaacaaatcatgctcggtaattcaagtg 9840770  T
Q  258 gttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccatt 357  Q
    |||||||||||||| |||||| |||| |||||  |||||||| |||||  |||||||||| || || | |||| | |||||||||| ||||||||||||     
T  9840771 gttgataagattaaatcgctcgcttttatgtga-ttgaaggcaaaatttgctactcttccattcaattatcatggttggtggcttaatccgttcaccatg 9840869  T
Q  358 ttgggcatagactaatagttattt 381  Q
     ||||||||  |||||||||||||    
T  9840870 atgggcatatgctaatagttattt 9840893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 381
Target Start/End: Original strand, 30505565 - 30505842
Alignment:
Q  103 tgccagattattttattcaattcagttatattggtagatcagaaaaggtttggaggtcaatttcacaggatatttggtttgcaactgtctgggaaatctg 202  Q
    |||| ||| |||||| |||||| ||||||| |||| |  | | ||||||| || | ||||| | ||||| |||||||||||| ||||| || ||||| ||    
T  30505565 tgccggatcattttaatcaatttagttatagtggtggtaccgcaaaggttcggtgttcaatattacaggttatttggtttgctactgtttgagaaatttg 30505664  T
Q  203 gaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaa 302  Q
    |||||||||||||||||| ||||| |  || |||| ||  |||| | | || |||||||||||||||||||  ||| | || || | | ||||||| |||    
T  30505665 gaaagaaagaaataacaggctattcaaagacaaaaaatactcgataatacatgtggttgataagattaagtttctcgcatttatctag-ttgaaggagaa 30505763  T
Q  303 attcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagttattt 381  Q
    |||  || | |||||||| || | |||| | |||||| |||||| ||| ||||| |||||||||| |||||||||||||    
T  30505764 attttcttcacttcccttcaattatcatggttggtggtttagtctgtttaccatgttgggcataggctaatagttattt 30505842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 381
Target Start/End: Original strand, 18766679 - 18766797
Alignment:
Q  262 ataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgg 361  Q
    ||||||||||||| ||||| || |||||| |||| ||||||||| |||| |||||||||||| |||||| |||||||||||| ||||||||| ||  |||    
T  18766679 ataagattaagtccctcacatttatgtgg-ttgatggcgaaatttactaatcttccctttaattttcatggctggtggcttaatccgttcacaatactgg 18766777  T
Q  362 gcatagactaatagttattt 381  Q
    |||||  ||||| |||||||    
T  18766778 gcatatgctaattgttattt 18766797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 44736141 - 44735982
Alignment:
Q  186 actgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttca 285  Q
    ||||| |||||||| | ||||||||||||||||||  | ||||  || |||| ||| |||  | |||||||||| || ||||||||||| |||||||| |    
T  44736141 actgtttgggaaatttagaaagaaagaaataacaggttttttacagacaaaatatgctcggtagttcaggtggtcgacaagattaagtccctcactttta 44736042  T
Q  286 tgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtc 346  Q
    ||||| ||||||||||| || | |||||||||||| || |||||| | | |||||||||||    
T  44736041 tgtgg-ttgaaggcgaagtttaatactcttcccttcaattttcatggttagtggcttagtc 44735982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 27009200 - 27009325
Alignment:
Q  255 gtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacc 354  Q
    |||||||||||||||||||| ||| |||| | |||  |||||||||||||| ||| |||||||||| || |  ||| | ||||||||||||||||| |||    
T  27009200 gtggttgataagattaagtctctcgcttttaggtga-ttgaaggcgaaatttacttctcttcccttcaattaccatggttggtggcttagtccgtttacc 27009298  T
Q  355 attttgggcatagactaatagttattt 381  Q
    ||  ||| ||||| |||||||||||||    
T  27009299 atactggacataggctaatagttattt 27009325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 378
Target Start/End: Original strand, 35590220 - 35590347
Alignment:
Q  250 ttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgt 349  Q
    |||||||||||||||| ||||||| ||| ||||||| |||||| ||||||||| |   |   ||||||||| |||| |||| | ||||||||||| || |    
T  35590220 ttcaggtggttgataaaattaagttgctgactttcaggtggct-gaaggcgaagtatccgtgtcttcccttcaactatcatggttggtggcttagcccct 35590318  T
Q  350 tcaccattttgggcatagactaatagtta 378  Q
    || | ||||||||||||| ||||||||||    
T  35590319 tctctattttgggcataggctaatagtta 35590347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 381
Target Start/End: Complemental strand, 33645990 - 33645808
Alignment:
Q  198 atctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttgaag 297  Q
    ||||||||||||||||||||||  |  ||||  ||||||  ||| |||| |  |||| ||||||||||||||||||||||| | || | |||| ||||||    
T  33645990 atctggaaagaaagaaataacatgcattttaacgataaagaatgctcgataagtcagatggttgataagattaagtcgctcgcatttaggtgg-ttgaag 33645892  T
Q  298 gcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagttattt 381  Q
    |  |||||  |||||||||| || || |  ||| | |||||| |||||| |||||||||||||  ||||| || ||||||||||    
T  33645891 gaaaaatttgctactcttcctttcaattaccatggttggtgggttagtctgttcaccattttgaacataggctgatagttattt 33645808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 9647144 - 9647194
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  9647144 gagaaatgatatttgaacaactattttttacaactttctctctcatactca 9647194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 443
Target Start/End: Complemental strand, 27696017 - 27695975
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctct 443  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  27696017 gagaaatgatatttgaacaaccatttttgacaactttctctct 27695975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 24727425 - 24727477
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  24727425 tgagaaatgatatttgtacaaccattttggtacaactttctctctcatactca 24727477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 6646835 - 6646886
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  6646835 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 6646886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 451
Target Start/End: Complemental strand, 10060489 - 10060443
Alignment:
Q  405 aatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||    
T  10060489 aatgatatttgaacaaccatttttaacaactttatctctcatactca 10060443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 381
Target Start/End: Complemental strand, 36176741 - 36176614
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    ||||||||||||||||||||||||||||| || ||||||  | | || ||||||  || |||||| ||| || | |||| | |||||  ||||||| ||     
T  36176741 caggtggttgataagattaagtcgctcacatttatgtgg--ttatggtgaaatttgcttctcttctcttcaattatcatggttggtgttttagtccattt 36176644  T
Q  352 accattttgggcatagactaatagttattt 381  Q
    ||||| ||||| |||| |||||||||||||    
T  36176643 accatgttgggtataggctaatagttattt 36176614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 3012905 - 3012856
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatact 449  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  3012905 gagaaatgatatttgaacatccattttgtgacaactttctctctcatact 3012856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 22888896 - 22888860
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattttcgacaa 433  Q
    ||||||||||||||||||||||||||||||| |||||    
T  22888896 ttttgagaaatgatatttgaacaaccatttttgacaa 22888860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 27490801 - 27490765
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||| |||||||||    
T  27490801 gagaaatgatatttgaacaaccatttttgacaacttt 27490765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 32972963 - 32972915
Alignment:
Q  404 aaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||    
T  32972963 aaatgatatttgaacatccattttgtgacaactttctctctcatactca 32972915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 2971874 - 2971823
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||| |||||||||||| |||||||  |||||||||||||||||||||||    
T  2971874 gagaaaagatatttgaacatccattttgtgacaactttctctctcatactca 2971823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 7121386 - 7121441
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| | |||||||||   ||||||||||||||||||||||    
T  7121386 ttttgagaaatgatatttgtataaccattttgtaacaactttctctctcatactca 7121441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 18948704 - 18948759
Alignment:
Q  162 atttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataa 217  Q
    |||| ||||| ||||| ||||||||| || |||||||| |||||||||||||||||    
T  18948704 attttacaggttatttagtttgcaacggtatgggaaatatggaaagaaagaaataa 18948759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 367
Target Start/End: Original strand, 24739871 - 24739930
Alignment:
Q  308 ctactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatag 367  Q
    |||| ||||||||||||| |||| | |||||||||||||||||||| ||| | |||||||    
T  24739871 ctacccttccctttaactatcatggttggtggcttagtccgttcactattctaggcatag 24739930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 28013967 - 28014018
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||| ||||||| ||||||| |||| |||||||||||||||||||||||    
T  28013967 gagaaattatatttgtacaaccaatttttgacaactttctctctcatactca 28014018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 29795447 - 29795498
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  |||||||||||||| ||||||||    
T  29795447 gagaaatgatatttgtacaaccattttgtgacaactttctctcacatactca 29795498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 33737393 - 33737342
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  33737393 gagaaatgatatttgaactaccattttgtgacaaatttctctctcatactca 33737342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 42081048 - 42081099
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||| ||| |||| |||||||||||||||||||||||    
T  42081048 gagaaatgatatttgtacagccactttttgacaactttctctctcatactca 42081099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 42678761 - 42678812
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| ||||||   |||||||||||||||||||||||    
T  42678761 gagaaatgatatttgaacatccatttagtgacaactttctctctcatactca 42678812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 4263923 - 4263873
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||  |||| ||||||||||||| |||||||||    
T  4263923 gagaaatgatatttgtacaacattttttgacaactttctctttcatactca 4263873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 9760015 - 9760053
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  9760015 ttgagaaatgatatttgaacaaccattttttacaacttt 9760053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 23352963 - 23352913
Alignment:
Q  402 agaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||| ||||||| |||||||  |||||||||||||||||||||||    
T  23352963 agaaatgatacttgaacagccattttgtgacaactttctctctcatactca 23352913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 37631246 - 37631280
Alignment:
Q  392 ttaaattttgagaaatgatatttgaacaaccattt 426  Q
    |||||||||||| ||||||||||||||||||||||    
T  37631246 ttaaattttgagcaatgatatttgaacaaccattt 37631280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 45202195 - 45202145
Alignment:
Q  398 tttgagaaatgatatttgaacaacca-ttttcgacaactttctctctcata 447  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||||||||||    
T  45202195 tttgagaaatgatatttgtacaaccatttttttacaactttctctctcata 45202145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 841593 - 841548
Alignment:
Q  308 ctactcttccctttaactttcattgctggtggcttagtccgttcac 353  Q
    |||||||||||||||||| |||| | ||||||||||||| ||||||    
T  841593 ctactcttccctttaactatcatggttggtggcttagtctgttcac 841548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 5589526 - 5589571
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    ||||||||||| ||||| |||||||  |||||||||||||||||||    
T  5589526 atttggtttgctactgtttgggaaagatggaaagaaagaaataaca 5589571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 6049405 - 6049353
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt--cgacaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||||||   || ||||||||||||||||||||    
T  6049405 gagaaatgatatttgatcaaccatttttgtgataactttctctctcatactca 6049353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Complemental strand, 8848763 - 8848730
Alignment:
Q  404 aaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||| |||||||||    
T  8848763 aaatgatatttgaacaaccatttttgacaacttt 8848730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 451
Target Start/End: Original strand, 24361499 - 24361553
Alignment:
Q  395 aattttgagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||| ||||||||||||||| |||||  |||| ||||||||||| |||||||||||    
T  24361499 aatttagagaaatgatatttgtacaac--tttttgacaactttctatctcatactca 24361553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 35590145 - 35590190
Alignment:
Q  175 tttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    |||||| |||||||   |||||||||||||||||||||||||||||    
T  35590145 tttggtatgcaactacgtgggaaatctggaaagaaagaaataacag 35590190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 38332146 - 38332109
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtg 289  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  38332146 caggtggttgataagataaagtcgctctctttcatgtg 38332109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 2167532 - 2167484
Alignment:
Q  333 ctggtggcttagtccgttcaccattttgggcatagactaatagttattt 381  Q
    |||||||||||||||||| ||||| |||| ||| ||||||| |||||||    
T  2167532 ctggtggcttagtccgtttaccatgttggacatggactaattgttattt 2167484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 6511251 - 6511287
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  6511251 gagaaatgatatttgaacaaccattttttacaacttt 6511287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 447
Target Start/End: Complemental strand, 11828877 - 11828833
Alignment:
Q  404 aaatgatatttgaacaaccattttcg-acaactttctctctcata 447  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||    
T  11828877 aaatgatatttgtacaaccatttttgtacaactttctctctcata 11828833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 12606776 - 12606828
Alignment:
Q  168 caggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    |||| |||||| |||||||| || |||||||| |||||||||||||| |||||    
T  12606776 caggttatttgatttgcaacagtttgggaaatttggaaagaaagaaacaacag 12606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 15141464 - 15141524
Alignment:
Q  393 taaatttt-gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||| ||||||||||||||| ||| | |||||  |||||||||||||||||||||||    
T  15141464 taaattttagagaaatgatatttgtacatctattttatgacaactttctctctcatactca 15141524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 17999735 - 17999691
Alignment:
Q  402 agaaatgatatttgaacaaccattttcgacaactttctctctcat 446  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||    
T  17999735 agaaatgatacttgtacaaccattttgtacaactttctctctcat 17999691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 18254280 - 18254244
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  18254280 gagaaatgatatttgaacaaccattttttacaacttt 18254244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 25801874 - 25801822
Alignment:
Q  400 tgagaaatgatatttgaacaacc-attttcgacaactttctctctcatactca 451  Q
    |||||||||||||||| |||||| ||||  ||||||||| |||||||||||||    
T  25801874 tgagaaatgatatttgtacaaccaatttgtgacaactttatctctcatactca 25801822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 27329169 - 27329121
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatac 448  Q
    ||||||||||||||| |||| |||||| | |||||||||||||||||||    
T  27329169 gagaaatgatatttgtacaatcattttggtacaactttctctctcatac 27329121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 27538977 - 27538925
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||||||| | |||||||||||| | |||||||    
T  27538977 tgagaaatgatatttgtacaaccatttttgtacaactttctctatgatactca 27538925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 30831756 - 30831792
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  30831756 gagaaattatatttgaacaaccatttttgacaacttt 30831792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 381
Target Start/End: Original strand, 31640235 - 31640366
Alignment:
Q  249 cttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccg 348  Q
    ||||| ||||| |||||||||||||| ||  |||| | |||| ||||||||||||||  || |||||||| | || |  ||| | |||||||||||||||    
T  31640235 cttcaagtggtagataagattaagtcacttgcttttacgtgg-ttgaaggcgaaatttgcttctcttcccctcaattaccatggatggtggcttagtccg 31640333  T
Q  349 ttcaccattttgggcatagactaatagttattt 381  Q
    || || ||| | ||||||| ||| | |||||||    
T  31640334 tttacaattataggcataggctagtggttattt 31640366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 40426970 - 40426926
Alignment:
Q  309 tactcttccctttaactttcattgctggtggcttagtccgttcac 353  Q
    ||||||||||||||||| |||| | |||||||||| |||||||||    
T  40426970 tactcttccctttaactatcatggttggtggcttaatccgttcac 40426926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 41042254 - 41042290
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  41042254 gagaaatgatatttgaacaaccatttttaacaacttt 41042290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 5e-57; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 25 - 381
Target Start/End: Complemental strand, 34703809 - 34703454
Alignment:
Q  25 tacattgtaacttttttgggtttgtttgacatttaatttatgggtggttgggcatctctgcggtgccacctcagtttttgccagattattttattcaatt 124  Q
    ||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||  ||   |||||||||| ||||| ||| |||| ||||||||    
T  34703809 tacattgtaacttttttgggtctgtctgggatttaatttatgggtggttgggcatctctatggctgcacctcagttcttgccggatcatttgattcaatt 34703710  T
Q  125 cagttatattggtagatcagaaaaggtttggaggtcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagacta 224  Q
     ||| || || || |||||   |    |||  | ||||||| ||| | ||| |||| ||| |||||||||||||| |||||||||||||||||||   ||    
T  34703709 tagtaattttcgtggatcatggagaacttgtcgatcaattttacaagttatctggtatgctactgtctgggaaatatggaaagaaagaaataacatgtta 34703610  T
Q  225 tttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaac 324  Q
    || |  |||| |||||| |||   |||||||||||||||||||||||||| |||||||| |||||| |||||||||||||   | |||||||||||||||    
T  34703609 ttcacagatagaacatgctcggttcttcaggtggttgataagattaagtccctcacttttatgtgg-ttgaaggcgaaatatgcaactcttccctttaac 34703511  T
Q  325 tttcattgctggtggcttagtccgttcaccattttgggcatagactaatagttattt 381  Q
    |||||| | |||||||| ||| |||||||||| |||| ||||| |||||||||||||    
T  34703510 tttcatggttggtggctaagttcgttcaccatgttggacataggctaatagttattt 34703454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 174 - 380
Target Start/End: Complemental strand, 36098798 - 36098593
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagt 273  Q
    ||||||||||| || || |||||| | |||||||||||||||||||   | ||||  |||||   ||| |||  | |||||||||||| ||| |||||||    
T  36098798 atttggtttgctacggtttgggaattttggaaagaaagaaataacatgttgtttaatgataaggaatgatcggtaattcaggtggttggtaatattaagt 36098699  T
Q  274 cgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaat 373  Q
    | ||| | || | |||||| |||||| ||||||| ||| |||||||| || | |||| ||||||||||||||||||||||||| |||||||||| ||||     
T  36098698 ctctcgcctttaggtggct-gaaggcaaaattcattacacttcccttcaattatcatggctggtggcttagtccgttcaccatgttgggcataggctaag 36098600  T
Q  374 agttatt 380  Q
    |||||||    
T  36098599 agttatt 36098593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 381
Target Start/End: Original strand, 44675009 - 44675222
Alignment:
Q  167 acaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactattta-tggataaaacatgttcgacacttcaggtggttgataa 265  Q
    ||||| |||||||||||||||||| || ||||| |  ||||||| |||||||||  |||| | ||| ||| | ||| ||||   | || |||||||||||    
T  44675009 acaggttatttggtttgcaactgtgtgagaaatttataaagaaataaataacaggttattcaatggctaaga-atgctcgatcgtgcaagtggttgataa 44675107  T
Q  266 gattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcat 365  Q
    ||||||| | ||  | ||||||||| ||||||||||||||  || | |||||||| || | |||| | ||||||||||||||||| | ||| ||||||||    
T  44675108 gattaagccacttgcattcatgtgg-ttgaaggcgaaatttgcttcccttcccttcaattatcatggttggtggcttagtccgtttatcatgttgggcat 44675206  T
Q  366 agactaatagttattt 381  Q
    ||||||||||||||||    
T  44675207 agactaatagttattt 44675222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 4889452 - 4889577
Alignment:
Q  255 gtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacc 354  Q
    ||||||||||| |||||||||||  | ||||||||| || |||||||| ||| || ||||||||||||||| |||| | ||||| |||||||| |||||     
T  4889452 gtggttgataaaattaagtcgcttgcattcatgtgg-ttcaaggcgaagttcccttctcttccctttaactatcatgggtggtgacttagtccattcact 4889550  T
Q  355 attttgggcatagactaatagttattt 381  Q
    ||||||| ||||| |||| ||||||||    
T  4889551 attttggacataggctaaaagttattt 4889577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 377
Target Start/End: Complemental strand, 10686345 - 10686161
Alignment:
Q  192 tgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcga-cacttcaggtggttgataagattaagtcgctcactttcatgtgg 290  Q
    ||||||||||||||| |||||||||| ||| | ||||  || ||||| || |||  |||| |||||||| |||||||||||||| || || ||   ||||    
T  10686345 tgggaaatctggaaataaagaaataatagattgtttacagacaaaacttgctcggtcact-caggtggtggataagattaagtcccttacatttgcgtgg 10686247  T
Q  291 cttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagtt 377  Q
     ||||||||||| || |||| ||||||| ||||  ||||| | |||||| || |||||||||| || |||||||||| |||||||||    
T  10686246 -ttgaaggcgaagtttactaatcttcccattaatcttcatggttggtggttttgtccgttcacaatgttgggcataggctaatagtt 10686161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 6723812 - 6723708
Alignment:
Q  251 tcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgtt 350  Q
    ||||||||| || ||||||||||| |||||||| |||||| ||||||| ||| || | ||||| ||| || || |||||| | |||||||||||||||||    
T  6723812 tcaggtggtcgacaagattaagtccctcacttttatgtgg-ttgaaggtgaagtttaatactcctcctttcaattttcatggatggtggcttagtccgtt 6723714  T
Q  351 caccat 356  Q
    ||||||    
T  6723713 caccat 6723708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 350
Target Start/End: Original strand, 12688177 - 12688274
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgtt 350  Q
    |||||||| ||||||||||||| ||| ||||| | |||| ||||||| ||| ||  | |||||||||||||||| |||| | |||||||||||||||||    
T  12688177 caggtggtggataagattaagttgctaacttttaagtgg-ttgaaggtgaagtttccaactcttccctttaactatcatggatggtggcttagtccgtt 12688274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 48103448 - 48103398
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  48103448 gagaaatgatatttgaacaactatttgtgacaactttctctctcatactca 48103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 46271933 - 46271978
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  46271933 atttggtttgctactgtgtgggaaatctggaaagaaagaaataaca 46271978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 40139125 - 40139177
Alignment:
Q  400 tgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  40139125 tgagaaatgatatttgtacaaccattttatgacaactttctctctcatactca 40139177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 41507255 - 41507203
Alignment:
Q  400 tgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  41507255 tgagaaatgatatttgtacaaccattttgtgacaactttctctctcatactca 41507203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 8200087 - 8200138
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  8200087 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 8200138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 33358218 - 33358167
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  33358218 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 33358167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 40596114 - 40596063
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  40596114 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactca 40596063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 44889249 - 44889202
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacaga 221  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  44889249 atttggtttgctactgtttgggaaatatggaaagaaagaaataacaga 44889202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 45272220 - 45272169
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  45272220 gagaaatgatatttgtacaaccactttttgacaactttctctctcatactca 45272169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 48220203 - 48220152
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  48220203 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 48220152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 50781629 - 50781578
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  50781629 gagaaatgatatttgaacatccattttatgacaactttctctctcatactca 50781578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 19969620 - 19969570
Alignment:
Q  402 agaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  19969620 agaaatgatatttgaacatccattttatgacaactttctctctcatactca 19969570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 45065960 - 45065910
Alignment:
Q  402 agaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  45065960 agaaatgatatttgaacatccattttgtgacaactttctctctcatactca 45065910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 51718688 - 51718635
Alignment:
Q  400 tgagaaatgatatttgaacaacca--ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||||||  ||||  ||||||||||||||||||||||    
T  51718688 tgagaaatgatatttgaacaaccatttttttcacaactttctctctcatactca 51718635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 10252146 - 10252191
Alignment:
Q  176 ttggtttgcaactgtctgggaaatctggaaagaaagaaataacaga 221  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  10252146 ttggtttgctactgtgtggaaaatctggaaagaaagaaataacaga 10252191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 3159372 - 3159412
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  3159372 ttttgagaaatgatatttgaacaaccattttttacaacttt 3159412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 15083121 - 15083085
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||| |||||||||    
T  15083121 gagaaatgatatttgaacaaccatttttgacaacttt 15083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 16252820 - 16252768
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||||||| | |||||||||||| |||||||||    
T  16252820 tgagaaatgatatttgtacaaccatttttgtacaactttctctttcatactca 16252768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 18336157 - 18336209
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  18336157 tgagaaatgatatttgaacattcattttgtgacaactttctctctcatactca 18336209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 43612140 - 43612092
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatac 448  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  43612140 gagaaatgatatttgtacaaccattttatgacaactttctctctcatac 43612092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 27687579 - 27687528
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  ||||||||| |||||||||||||    
T  27687579 gagaaatgatatttgtacaaccattttgtgacaactttatctctcatactca 27687528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 30414875 - 30414926
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||||||| | ||||| ||||||||||||||||    
T  30414875 gagaaatgatatttgtacaaccatttttgtacaaccttctctctcatactca 30414926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 33134295 - 33134338
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataa 217  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||    
T  33134295 atttggtttgctactgtttgggaaatatggaaagaaagaaataa 33134338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 35030824 - 35030773
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcg-acaactttctctctcatact 449  Q
    |||||||||| |||||| ||||||||||| | ||||||||||||||||||||    
T  35030824 ttgagaaatgttatttgtacaaccatttttgtacaactttctctctcatact 35030773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 42476236 - 42476279
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataa 217  Q
    |||||||||||||| || |||||||| |||||||||||||||||    
T  42476236 atttggtttgcaacagtgtgggaaatatggaaagaaagaaataa 42476279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 44632540 - 44632591
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| ||||||   |||||||||||||||||||||||    
T  44632540 gagaaatgatatttgaacatccatttggtgacaactttctctctcatactca 44632591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 46903481 - 46903532
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||||||||    
T  46903481 gagaaatgatatttgtacaaccattttgatacaactttctctctcatactca 46903532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 49241564 - 49241513
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| ||| |||  |||||||||||||||||||||||    
T  49241564 gagaaatgatatttgaacatccactttgtgacaactttctctctcatactca 49241513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 49453491 - 49453542
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  49453491 gagaaatgatatttgtacaaccactttgtgacaactttctctctcatactca 49453542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 50797791 - 50797842
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| |||| ||||||  |||||||||||||||||||||||    
T  50797791 gagaaatgatatttgtacaatcattttgtgacaactttctctctcatactca 50797842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 4857922 - 4857968
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcat 446  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||    
T  4857922 gagaaatgatatttgaacaatcactttttgacaactttctctctcat 4857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 451
Target Start/End: Complemental strand, 5477230 - 5477172
Alignment:
Q  394 aaattttgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||| ||| |||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  5477230 aaattatgataaatgatatttgtacaaccactttgtgacaactttctctctcatactca 5477172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 5975541 - 5975599
Alignment:
Q  394 aaattttgagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    |||||| |||||||||||| || ||| ||| |||| |||||||||||||||||||||||    
T  5975541 aaatttagagaaatgatatatgtacatccactttttgacaactttctctctcatactca 5975599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 381
Target Start/End: Complemental strand, 25392415 - 25392294
Alignment:
Q  259 ttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattt 358  Q
    |||||||||||||||||||| | |  |||||| ||||||||||| ||  ||  | ||||||| || | |||||| | |||||||||| |||| |||||      
T  25392415 ttgataagattaagtcgctcgcatgtatgtgg-ttgaaggcgaagttttcttattttcccttcaattatcattgttagtggcttagttcgtttaccatga 25392317  T
Q  359 tgggcatagactaatagttattt 381  Q
    |||| ||| ||||||||||||||    
T  25392316 tgggaataaactaatagttattt 25392294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 36494472 - 36494526
Alignment:
Q  398 tttgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||| |||||||||||||||| ||||||   |||||||||||||||||||||||    
T  36494472 tttgataaatgatatttgaacatccatttagtgacaactttctctctcatactca 36494526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 36954671 - 36954720
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||| ||||| ||||||||||| |||||||||||    
T  36954671 gagaaatgatatttgtacaac-atttttgacaactttctttctcatactca 36954720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 48872089 - 48872043
Alignment:
Q  400 tgagaaatgatatttgaacaacca-ttttcgacaactttctctctca 445  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||||    
T  48872089 tgagaaatgatatttgtacaaccattttttgacaactttctctctca 48872043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 50460771 - 50460721
Alignment:
Q  402 agaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||| ||||||||||| | |||||||||| |||||||||||    
T  50460771 agaaatgatatttgtacaaccatttttgtacaactttctttctcatactca 50460721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 443
Target Start/End: Complemental strand, 51080153 - 51080107
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattttcgacaactttctctct 443  Q
    |||| |||||||||||||| ||||| ||||| |||||||||||||||    
T  51080153 ttttaagaaatgatatttgtacaactatttttgacaactttctctct 51080107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 51571416 - 51571462
Alignment:
Q  402 agaaatgatatttgaacaacca-ttttcgacaactttctctctcata 447  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||||    
T  51571416 agaaatgatatttgtacaaccactttttgacaactttctctctcata 51571462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 365
Target Start/End: Original strand, 17128488 - 17128596
Alignment:
Q  256 tggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacca 355  Q
    ||||||| |||||||||||| | ||||||||||||| |||||| ||||| |   | ||||||||| || |  ||||| |||||||||||||| || ||||    
T  17128488 tggttgacaagattaagtcgttaactttcatgtggc-tgaaggggaaatacgtcaatcttcccttcaattaccattgttggtggcttagtccttttacca 17128586  T
Q  356 ttttgggcat 365  Q
    | || |||||    
T  17128587 tgttaggcat 17128596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 26260666 - 26260719
Alignment:
Q  168 caggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacaga 221  Q
    |||| ||||||||||||||| || || ||||| ||||| |||||||||||||||    
T  26260666 caggttatttggtttgcaacggtttgagaaatttggaaggaaagaaataacaga 26260719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 27099765 - 27099720
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    ||||||||||| ||||| ||| |||| |||||||||||||||||||    
T  27099765 atttggtttgctactgtgtggaaaatatggaaagaaagaaataaca 27099720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 37685330 - 37685367
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  37685330 tgagaaatgatatttgaacaaccattttttacaacttt 37685367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 37700188 - 37700151
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  37700188 tgagaaatgatatttgaacaaccattttttacaacttt 37700151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 2571635 - 2571671
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  2571635 gagaaatgatatttgaacaaccattttttacaacttt 2571671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 2653901 - 2653861
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaa 214  Q
    |||||||||||||| || |||||||| ||||||||||||||    
T  2653901 atttggtttgcaacggtgtgggaaatttggaaagaaagaaa 2653861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 8350267 - 8350231
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  8350267 gagaaatgatatttgaacaaccattttttacaacttt 8350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 16836176 - 16836124
Alignment:
Q  400 tgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||| |||| ||||||  ||||||||| |||||||||||||    
T  16836176 tgagaaatgatatttgtacaatcattttgtgacaactttttctctcatactca 16836124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 27363772 - 27363736
Alignment:
Q  336 gtggcttagtccgttcaccattttgggcatagactaa 372  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  27363772 gtggcttagtccgtttaccattttgggcataggctaa 27363736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 31433501 - 31433553
Alignment:
Q  400 tgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||| ||||||| ||||||||||| |||||| ||| |||||||||||||    
T  31433501 tgagaaattatatttgtacaaccattttacgacaattttttctctcatactca 31433553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 32319369 - 32319317
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| |||| ||||||   |||||||||||||||||||||||    
T  32319369 tgagaaatgatatttaaacatccatttggtgacaactttctctctcatactca 32319317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 33100808 - 33100844
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  33100808 gagaaatgatatttgaacaaccattttttacaacttt 33100844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Complemental strand, 40439921 - 40439885
Alignment:
Q  391 tttaaattttgagaaatgatatttgaacaaccatttt 427  Q
    |||| |||||||||||||||| |||||||||||||||    
T  40439921 tttacattttgagaaatgatacttgaacaaccatttt 40439885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 40708636 - 40708576
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    ||||||| ||||  ||||||||||||||| || | |||||| || ||||||||||||||||    
T  40708636 tcaattttacagactatttggtttgcaaccgtgtaggaaatttgaaaagaaagaaataaca 40708576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 44519222 - 44519186
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||| |||||||||||||| |||||||||    
T  44519222 gagaaatgatatatgaacaaccatttttgacaacttt 44519186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 47642680 - 47642652
Alignment:
Q  399 ttgagaaatgatatttgaacaaccatttt 427  Q
    |||||||||||||||||||||||||||||    
T  47642680 ttgagaaatgatatttgaacaaccatttt 47642652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 274
Target Start/End: Complemental strand, 48610980 - 48610880
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagt 273  Q
    ||||||| ||| |||||  ||||||| |||||||||||||||| |||| | || |  || |||  ||||||||||  |||| | ||||||||||||||||    
T  48610980 atttggtatgctactgtgggggaaatatggaaagaaagaaatagcagaattttcaatgacaaagaatgttcgacatatcagattgttgataagattaagt 48610881  T
Q  274 c 274  Q
    |    
T  48610880 c 48610880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 196 - 394
Target Start/End: Original strand, 29969787 - 29969985
Alignment:
Q  196 aaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttga 295  Q
    ||||||||||||||||||||||||| || ||||  ||||||||||| |||| | | |||||||||||||||| |||||| |  ||||| |||||| ||||    
T  29969787 aaatctggaaagaaagaaataacaggctttttacagataaaacatgctcgatattacaggtggttgataagaataagtcccatacttttatgtgg-ttga 29969885  T
Q  296 aggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagttattt-tgttctagtttta 394  Q
    |||||||||| ||||||||||||||  ||||| || | |||||||||||||||||||||||  | | ||||||||||||||||||| |||||||||||||    
T  29969886 aggcgaaatttactactcttcccttctacttttatggttggtggcttagtccgttcaccatgatagacatagactaatagttatttctgttctagtttta 29969985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 159 - 377
Target Start/End: Original strand, 20510299 - 20510516
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtgg 258  Q
    |||||||||||||  || |||||||| || |||| ||| ||||||||||||||||| ||||  | ||||| ||||||||| || |||  | | |||||||    
T  20510299 tcaatttcacaggtcatctggtttgctacagtctaggagatctggaaagaaagaaacaacatgcaatttacggataaaacttgctcggtattacaggtgg 20510398  T
Q  259 ttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattt 358  Q
    ||||||||||||||||  || |||| |||||| ||||||| |||||| |  || |||||||| || |||||| | |||||||||||||||||||||||      
T  20510399 ttgataagattaagtccatctcttttatgtgg-ttgaaggtgaaatttaacacgcttcccttcaattttcatggttggtggcttagtccgttcaccatgc 20510497  T
Q  359 tgggcatagactaatagtt 377  Q
    |||||||||  ||||||||    
T  20510498 tgggcataggttaatagtt 20510516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 381
Target Start/End: Complemental strand, 30972488 - 30972360
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||  || |||||||||| |||| |||| |||||||||||||||  |||    
T  30972488 caggtggttgataaaattaagtcgctgactttcatgtggct-gaaggcgaaatttccttctcttcccttcaactatcatggctggtggcttagtcatttc 30972390  T
Q  352 accattttgggcatagactaatagttattt 381  Q
    || ||||| ||||||| |||||||||||||    
T  30972389 actatttttggcataggctaatagttattt 30972360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 381
Target Start/End: Complemental strand, 27270108 - 27269978
Alignment:
Q  250 ttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgt 349  Q
    |||| ||||||||||| ||||||||  |||||||||||||| ||||||||||||||  || | |||||||| || | |||| | |||||||||||||| |    
T  27270108 ttcacgtggttgataaaattaagtcaatcactttcatgtgg-ttgaaggcgaaatttccttcacttcccttcaattatcatggttggtggcttagtccat 27270010  T
Q  350 tcaccattttgggcatagactaatagttattt 381  Q
    |||| ||||||| ||||  |||||||||||||    
T  27270009 tcacaattttggacatatgctaatagttattt 27269978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 250 - 381
Target Start/End: Complemental strand, 21205000 - 21204870
Alignment:
Q  250 ttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgt 349  Q
    ||||| |||||||||| ||||||||  |||||||||||||| ||||| ||||||||  || | |||||||| || | |||| | |||||||||||| | |    
T  21205000 ttcagatggttgataaaattaagtcaatcactttcatgtgg-ttgaatgcgaaattttcttcacttcccttcaattatcatggttggtggcttagttcat 21204902  T
Q  350 tcaccattttgggcatagactaatagttattt 381  Q
    |||| ||||||| ||||| |||||||||||||    
T  21204901 tcacaattttggacataggctaatagttattt 21204870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 305
Target Start/End: Original strand, 22653141 - 22653338
Alignment:
Q  107 agattattttattcaattcagttatattggtagatcagaaaaggtttggaggtcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaa 206  Q
    |||| ||||||||||||||||||||| |||| |  | | ||||||| |    ||||||| ||| | ||||| |||||| |  || |||||||| || |||    
T  22653141 agatcattttattcaattcagttatagtggtggtaccgcaaaggttcgacaatcaattttacaagctatttagtttgctatagtttgggaaatttgaaaa 22653240  T
Q  207 gaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaatt 305  Q
    |||||||||||||| ||||| |  || |||  ||| |||  | | |||||||||||||||||||| |||||||| || |||||| ||||||||||||||    
T  22653241 gaaagaaataacaggctattcaaagacaaactatgctcggtaatacaggtggttgataagattaaatcgctcacatttatgtgg-ttgaaggcgaaatt 22653338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 39605979 - 39606029
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  39605979 gagaaatgatatatgaacaaccatttttgacaactttctctctcatactca 39606029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 9831381 - 9831483
Alignment:
Q  250 ttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgt 349  Q
    |||||||||| |||||||| ||||| ||  |||| | |||| |||||||||||||||  ||| |||||||| || | |||| ||||||||||||||||||    
T  9831381 ttcaggtggtggataagatcaagtctcttgcttttaggtgg-ttgaaggcgaaattcgttacacttcccttcaattatcatggctggtggcttagtccgt 9831479  T
Q  350 tcac 353  Q
    ||||    
T  9831480 tcac 9831483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 365
Target Start/End: Original strand, 37772909 - 37773023
Alignment:
Q  250 ttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgt 349  Q
    ||||| |||||||||| |||||||||||||||||| | ||| |||||   ||||||  || |||||||||| || |  ||| | |||||||||||||| |    
T  37772909 ttcagatggttgataacattaagtcgctcactttcttatgg-ttgaaaaagaaatttccttctcttcccttcaattaccatggttggtggcttagtcctt 37773007  T
Q  350 tcaccattttgggcat 365  Q
    ||||||||||||||||    
T  37773008 tcaccattttgggcat 37773023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 5386385 - 5386435
Alignment:
Q  402 agaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactca 5386435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 46686245 - 46686295
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  46686245 gagaaatgatatttgtacaaccattttgtacaactttctctctcatactca 46686295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 24310582 - 24310530
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  24310582 tgagaaatgatatttgtacaaccatttttgtacaactttctctctcatactca 24310530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 8813914 - 8813961
Alignment:
Q  167 acaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaa 214  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  8813914 acaggttatttggtttgcaacagtctgggaaatttggaaagaaagaaa 8813961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 350
Target Start/End: Complemental strand, 25130538 - 25130444
Alignment:
Q  255 gtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgtt 350  Q
    ||||| |||||||| ||||| ||| ||||||||||| ||||||| ||||||  |||||||| || | |||| |||| | |||||||||||||||||    
T  25130538 gtggtcgataagatcaagtccctcgctttcatgtgg-ttgaaggagaaatttgctactctttccctcaactatcatggttggtggcttagtccgtt 25130444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 28657500 - 28657449
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  28657500 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 28657449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 31657658 - 31657709
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  31657658 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 31657709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 42490920 - 42490971
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  42490920 gagaaatgatatttgtacaaccactttttgacaactttctctctcatactca 42490971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 43769723 - 43769774
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  43769723 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 43769774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 48336967 - 48337081
Alignment:
Q  260 tgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccatttt 359  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||  || |||||||||| ||   |||| | |||||| ||||| | ||||| || ||    
T  48336967 tgataaaattaagtcgctaactttcatgtgg-ttgaaggcgaaatttccttctcttcccttcaatcatcatagttggtggtttagttcattcactatatt 48337065  T
Q  360 gggcatagactaatag 375  Q
     ||||||| |||||||    
T  48337066 aggcataggctaatag 48337081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 5634773 - 5634819
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||||    
T  5634773 atttggtttgcaactgtgtgggaattgtggaaagaaagaaataacag 5634819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 26718373 - 26718431
Alignment:
Q  394 aaattttgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||| ||||||||||||||||||| |||||||  ||||| |||||||||||||||||    
T  26718373 aaatttagagaaatgatatttgaacatccattttatgacaattttctctctcatactca 26718431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 26731001 - 26731059
Alignment:
Q  394 aaattttgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||| ||||||||||||||||||| |||||||  ||||| |||||||||||||||||    
T  26731001 aaatttagagaaatgatatttgaacatccattttatgacaattttctctctcatactca 26731059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Complemental strand, 39241364 - 39241310
Alignment:
Q  398 tttgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  39241364 tttgagaaatgatatttgtacaaccaatttgtgacaactttctctctcatactca 39241310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 364
Target Start/End: Original strand, 43001630 - 43001819
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagt 273  Q
    ||||||| ||| || || |||||||| |||||| ||||||| || ||| |||| |  ||||||  ||| ||||||  |||  | || |||||||||||||    
T  43001630 atttggtatgctacagtgtgggaaatttggaaaaaaagaaacaatagattattcaatgataaagaatgctcgacatctcaaatcgtggataagattaagt 43001729  T
Q  274 cgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggca 364  Q
    | || || || |||||| ||||||||||| || ||||||||||  || || | ||||   ||||||||||||||||||| ||| |||||||    
T  43001730 cactaacatttatgtgg-ttgaaggcgaagtttactactcttcatttcaattatcatatgtggtggcttagtccgttcagcatgttgggca 43001819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 10552692 - 10552737
Alignment:
Q  308 ctactcttccctttaactttcattgctggtggcttagtccgttcac 353  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||    
T  10552692 ctactcttccctttaactatcatggttggtggcttagtccgttcac 10552737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 17683357 - 17683410
Alignment:
Q  399 ttgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||| |||||||  ||||||||| |||||||||||||    
T  17683357 ttgagaaatgatatttgaacatccattttatgacaactttatctctcatactca 17683410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 398 - 451
Target Start/End: Complemental strand, 50608686 - 50608633
Alignment:
Q  398 tttgagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    |||||||||| ||||||||||||  ||||| ||||||||||||| |||||||||    
T  50608686 tttgagaaattatatttgaacaattatttttgacaactttctctttcatactca 50608633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 447
Target Start/End: Complemental strand, 32365728 - 32365680
Alignment:
Q  400 tgagaaatgatatttgaacaaccatttt-cgacaactttctctctcata 447  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||    
T  32365728 tgagaaatgatatttgtacaaccattttgtgacaactttctctctcata 32365680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 45082981 - 45083017
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||| |||||||||    
T  45082981 gagaaatgatatttgaacaaccatttttgacaacttt 45083017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 49906141 - 49906193
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||| ||||||||||  ||||| |||||||| ||||||||    
T  49906141 ttgagaaatgatatttgtacaaccatttgtgacaattttctctcacatactca 49906193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 1868953 - 1868902
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||||||| | |||||||||| |||||||||||    
T  1868953 gagaaatgatatttgtacaaccatttttgtacaactttctatctcatactca 1868902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 2109443 - 2109494
Alignment:
Q  401 gagaaatgatatttgaacaaccat-tttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||| ||| ||||||||||||| |||||||||    
T  2109443 gagaaatgatatttgtacaaccatcttttgacaactttctctttcatactca 2109494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 4511825 - 4511876
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| | |||||||||  |||||||||||||||||||||||    
T  4511825 gagaaatgatatttgtataaccattttatgacaactttctctctcatactca 4511876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 9828043 - 9827992
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||| |||||    
T  9828043 gagaaatgatatttgtacaaccattttagtacaactttctctctcacactca 9827992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 13609126 - 13609079
Alignment:
Q  173 tatttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||||||| || |||||||| |||||||| |||||||||||    
T  13609126 tatttggtttgcaacagtgtgggaaatttggaaagagagaaataacag 13609079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 32621638 - 32621689
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  ||||||||||||||| |||||||    
T  32621638 gagaaatgatatttgcacaaccattttgtgacaactttctctctaatactca 32621689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 37731926 - 37731977
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| |||| |||||| | ||||||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaactttctctctcatactca 37731977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 54036589 - 54036538
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  ||||||||| |||||||||||||    
T  54036589 gagaaatgatatttgtacaaccattttgtgacaactttatctctcatactca 54036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 1580346 - 1580292
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||  |||  ||||| |||||||||||||||||    
T  1580346 ttttgagaaatgatatttgtacaacactttgtgacaattttctctctcatactca 1580292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 7795024 - 7795074
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatact 449  Q
    |||||||||||||||| ||||||||||| | |||||||||| |||||||||    
T  7795024 tgagaaatgatatttgtacaaccatttttgtacaactttctttctcatact 7795074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 28676211 - 28676161
Alignment:
Q  402 agaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||| |||||||||||  ||||||||||||| |||||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaactttctctttcatactca 28676161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 36177896 - 36177942
Alignment:
Q  392 ttaaatttt-gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||    
T  36177896 ttaaattttagagaaatgatatttgaacaaccattttttacaacttt 36177942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 37997254 - 37997292
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  37997254 ttgagaaatgatatttgaacaaccattttttacaacttt 37997292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 41347526 - 41347476
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||| ||||||| |||| |||||| |||||||||||||||||| ||||    
T  41347526 gagaaattatatttgtacaatcatttttgacaactttctctctcatgctca 41347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 52577905 - 52577951
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||| || || |||||||||||||| ||||||||||||||    
T  52577905 atttggtttgctacggtgtgggaaatctggaaggaaagaaataacag 52577951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 5622457 - 5622494
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  5622457 tgagaaatgatatttgaacaaccattttttacaacttt 5622494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 13157352 - 13157397
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    |||||||||||||| || |||||||| |||||||||||||| ||||    
T  13157352 atttggtttgcaacagtgtgggaaatatggaaagaaagaaacaaca 13157397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 17683234 - 17683287
Alignment:
Q  399 ttgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||| |||||||    
T  17683234 ttgagaaatgatatttgaacattcattttatgacaactttctctcttatactca 17683287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 451
Target Start/End: Complemental strand, 30778326 - 30778273
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||| ||| ||| |||  |||||||||||||||||||||||    
T  30778326 ttgagaaatgatatttgtacagccaatttgtgacaactttctctctcatactca 30778273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 31413846 - 31413797
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatact 449  Q
    ||||||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  31413846 gagaaatgatatttgtacaactatttttgtacaactttctctctcatact 31413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 39440483 - 39440520
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  39440483 tgagaaatgatatttgaacaaccattttttacaacttt 39440520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 353
Target Start/End: Complemental strand, 40154013 - 40153925
Alignment:
Q  264 aagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcac 353  Q
    |||||||||||| | |||| || |||| ||||||| ||||||  ||| |||||||||||||| |||| | |||||||||| | |||||||    
T  40154013 aagattaagtcggtaacttacaggtgg-ttgaaggtgaaatttgctaatcttccctttaactatcatagttggtggcttaatacgttcac 40153925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 1840595 - 1840643
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatac 448  Q
    |||||||||||||||||||||||||||  || |||||||||||| ||||    
T  1840595 gagaaatgatatttgaacaaccattttgtgataactttctctcttatac 1840643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 12706163 - 12706199
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  12706163 gagaaatgatatttgaacatccattttcaacaacttt 12706199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 13137000 - 13137048
Alignment:
Q  173 tatttggtttgcaactgtctgggaaatctggaaagaaagaaataacaga 221  Q
    ||||||||||||||  || |||||||| || ||||||||||||||||||    
T  13137000 tatttggtttgcaagagtgtgggaaatatgaaaagaaagaaataacaga 13137048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 15515794 - 15515846
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||||| | ||||| |||||  |||||||||||||||||||||||    
T  15515794 tgagaaatgatattggtacaactattttatgacaactttctctctcatactca 15515846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 427
Target Start/End: Original strand, 23220329 - 23220361
Alignment:
Q  395 aattttgagaaatgatatttgaacaaccatttt 427  Q
    ||||||||||||||||||||| |||||||||||    
T  23220329 aattttgagaaatgatatttgtacaaccatttt 23220361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 23369403 - 23369367
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  23369403 gagaaatgatatttgaacaaccattttttacaacttt 23369367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 447
Target Start/End: Complemental strand, 28899276 - 28899228
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcata 447  Q
    |||||||||||||||| |||| |||||| | ||||||||||||||||||    
T  28899276 tgagaaatgatatttgtacaatcattttggtacaactttctctctcata 28899228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 29531676 - 29531640
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  29531676 gagaaatgatatttgaacaaccattttttacaacttt 29531640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 29974384 - 29974336
Alignment:
Q  404 aaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||||| |||||  ||||||||||||| |||||||||    
T  29974384 aaatgatatttgaacaactattttgtgacaactttctctttcatactca 29974336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 32807616 - 32807564
Alignment:
Q  168 caggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    |||| ||||||||||||||| || | |||||| |||||||| |||||||||||    
T  32807616 caggttatttggtttgcaacggtgttggaaatttggaaagagagaaataacag 32807564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 37297049 - 37297085
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  37297049 gagaaatgatatttgaacaaccattttttacaacttt 37297085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 40435066 - 40435110
Alignment:
Q  175 tttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    |||||||||| | | | ||||||||||||||||||||||||||||    
T  40435066 tttggtttgctattatgtgggaaatctggaaagaaagaaataaca 40435110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 43174984 - 43175020
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  43174984 gagaaatgatatttgaacaaccattttttacaacttt 43175020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 437
Target Start/End: Complemental strand, 44925208 - 44925164
Alignment:
Q  394 aaattttgagaaatgatatttgaacaacca-ttttcgacaacttt 437  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||    
T  44925208 aaattatgagaaatgatatttgaacaaccactttttgacaacttt 44925164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 45143736 - 45143688
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccatttt-cgacaactttctctctc 444  Q
    |||| |||||||||||||||||| |||||||  ||||||||||||||||    
T  45143736 tttttagaaatgatatttgaacatccattttatgacaactttctctctc 45143688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 45152505 - 45152457
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccatttt-cgacaactttctctctc 444  Q
    |||| |||||||||||||||||| |||||||  ||||||||||||||||    
T  45152505 tttttagaaatgatatttgaacatccattttatgacaactttctctctc 45152457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 45637351 - 45637391
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaa 214  Q
    |||||||||||||| || |||||||| ||||||||||||||    
T  45637351 atttggtttgcaacggtgtgggaaatttggaaagaaagaaa 45637391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 48494972 - 48494924
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatac 448  Q
    ||||||||||||||||||||||| ||||  |||||||| ||||||||||    
T  48494972 gagaaatgatatttgaacaaccactttttaacaactttatctctcatac 48494924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 52851339 - 52851391
Alignment:
Q  400 tgagaaatgatatttgaacaaccattt-tcgacaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||||||   |||||||||||||| ||||||||    
T  52851339 tgagaaatgatatttgcacaaccatttcatgacaactttctctcacatactca 52851391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 382
Target Start/End: Complemental strand, 12831706 - 12831484
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtgg 258  Q
    |||||||||||||  || |||||||| || |||||||| ||||||||||||||||| ||||  | ||||| ||||||||| || |||  | | |||||||    
T  12831706 tcaatttcacaggtcatctggtttgctacagtctgggagatctggaaagaaagaaacaacatgcaatttacggataaaacttgctcggtattacaggtgg 12831607  T
Q  259 ttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattt 358  Q
    ||||||||||||||||| || |||| |||||| ||||||| |||||| |  || |||||||| || |||||| | |||||||||||||||||||| || |    
T  12831606 ttgataagattaagtcgatctcttttatgtgg-ttgaaggtgaaatttaacacgcttcccttcaattttcatggttggtggcttagtccgttcactatgt 12831508  T
Q  359 tgggcatagactaatagttatttt 382  Q
    |||||||||  |||||||| ||||    
T  12831507 tgggcataggttaatagttttttt 12831484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 382
Target Start/End: Complemental strand, 12863681 - 12863459
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtgg 258  Q
    |||||||||||||  || |||||||| || |||| ||| ||||||||||||||||| ||||  | ||||| ||||||||| || |||  | | |||||||    
T  12863681 tcaatttcacaggtcatctggtttgctacagtctaggagatctggaaagaaagaaacaacatgcaatttacggataaaacttgctcggtattacaggtgg 12863582  T
Q  259 ttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattt 358  Q
    ||||||||||||||||  || |||| |||||| ||||||| |||||| |  || |||||||| || |||||| | |||||||||||||||||||| || |    
T  12863581 ttgataagattaagtccatctcttttatgtgg-ttgaaggtgaaatttaacacgcttcccttcaattttcatggttggtggcttagtccgttcactatgt 12863483  T
Q  359 tgggcatagactaatagttatttt 382  Q
    |||||||||  |||||||| ||||    
T  12863482 tgggcataggttaatagttttttt 12863459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 196 - 377
Target Start/End: Complemental strand, 27482827 - 27482647
Alignment:
Q  196 aaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttga 295  Q
    |||| ||||||||||||||||||||  | ||||  ||||||  ||| |||  | ||||||||||||||||||||||||| ||| | ||   |||| ||||    
T  27482827 aaatttggaaagaaagaaataacaggttgtttaatgataaagaatgctcggtaattcaggtggttgataagattaagtccctcgccttttggtgg-ttga 27482729  T
Q  296 aggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagtt 377  Q
    ||| ||||| |  ||| |||||||| || | |||| ||||||||||||||||||||||||| |||||||||| |||| ||||    
T  27482728 aggtgaaatacgttacacttcccttcaattatcatggctggtggcttagtccgttcaccatgttgggcataggctaagagtt 27482647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 381
Target Start/End: Complemental strand, 19315182 - 19314975
Alignment:
Q  173 tatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaag 272  Q
    |||||||||||| || || |||||||| ||||||||||||||||||||  |||| |  |  |||  ||| |||  | | |||||||||||||||||||||    
T  19315182 tatttggtttgctaccgtttgggaaatttggaaagaaagaaataacaggttattcaaaggcaaagaatggtcggtaatgcaggtggttgataagattaag 19315083  T
Q  273 tcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaa 372  Q
    || ||||| || |||||| ||||||||||||||  ||    ||||||  || | |||| | ||||||||||| ||||| |||||  | ||||||| ||||    
T  19315082 tcactcacatttatgtgg-ttgaaggcgaaatttgctttatttccctggaattatcatggttggtggcttagcccgtttaccatgctaggcataggctaa 19314984  T
Q  373 tagttattt 381  Q
    |||||||||    
T  19314983 tagttattt 19314975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 14923083 - 14923133
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  14923083 gagaaatgatatttgaacaaccattttttacaactttctctctcatactca 14923133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 804582 - 804395
Alignment:
Q  168 caggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataaga 267  Q
    |||| ||||||||||||||| || || ||||| ||||||||||||||||||||| |||| |  |||||||  || || | | | || ||||| || ||||    
T  804582 caggttatttggtttgcaacagtgtgagaaatttggaaagaaagaaataacagaatattcactgataaaaattgctctatattgcaagtggtagacaaga 804483  T
Q  268 ttaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccat 356  Q
    | |||||  | |||||||||||| ||||||| |||||    |||||| |||| |||||  ||| |||||||||| |||||||| |||||    
T  804482 taaagtccttaactttcatgtgg-ttgaaggagaaatgtgttactctcccctctaactaccatggctggtggctaagtccgtttaccat 804395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 267 - 381
Target Start/End: Complemental strand, 4396757 - 4396644
Alignment:
Q  267 attaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcata 366  Q
    |||||||| ||||| || || ||| |||| || |||||| |||||||||||||||||||| |||  ||||| ||||||||||||||| || |||| ||||    
T  4396757 attaagtccctcacatttatatgg-ttgagggagaaatttactactcttccctttaacttacatgactggtagcttagtccgttcacaatgttggacata 4396659  T
Q  367 gactaatagttattt 381  Q
    |  |||| |||||||    
T  4396658 gcttaattgttattt 4396644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 31124184 - 31124230
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||    
T  31124184 atttggtttgctactgtgtgggaaatctggaaagaaagaaataacag 31124230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 38036711 - 38036763
Alignment:
Q  400 tgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  38036711 tgagaaatgatatttaaacaaccattttacgacaactttctctctcatgctca 38036763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 14206400 - 14206451
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  14206400 gagaaatgatatttgtacaaccattttttgacaactttctctctcatactca 14206451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 8487964 - 8488014
Alignment:
Q  167 acaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataa 217  Q
    ||||| ||||||||||||||| || |||||||| |||||||||||||||||    
T  8487964 acaggttatttggtttgcaacagtgtgggaaatatggaaagaaagaaataa 8488014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 17972034 - 17971989
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||    
T  17972034 atttggtttgctactgtgtgggaaatatggaaagaaagaaataaca 17971989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 21210833 - 21210878
Alignment:
Q  404 aaatgatatttgaacaacca-ttttcgacaactttctctctcatac 448  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  21210833 aaatgatatttgaacaaccactttttgacaactttctctctcatac 21210878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 1274358 - 1274394
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||| |||||||||    
T  1274358 gagaaatgatatttgaacaaccatttttgacaacttt 1274394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 1839401 - 1839353
Alignment:
Q  404 aaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||    
T  1839401 aaatgatatttgaacatccattttgtgacaactttctctctcatactca 1839353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 18660759 - 18660795
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||| |||||||||    
T  18660759 gagaaatgatatttgaacaaccatttttgacaacttt 18660795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 356
Target Start/End: Original strand, 39839903 - 39840006
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    |||||||||||||| |||||||||    | ||||||||| |||||| |||| ||  |  ||||||||||||||| |||| | |||||||||||||| |||    
T  39839903 caggtggttgataaaattaagtcgacgtcgttcatgtgg-ttgaagacgaagtttccatctcttccctttaactatcatggttggtggcttagtcccttc 39840001  T
Q  352 accat 356  Q
    |||||    
T  39840002 accat 39840006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 372780 - 372729
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||| |||| |||||||||||  |||||||||||||||||||||||    
T  372780 gagaaatgatttttgtacaaccattttgtgacaactttctctctcatactca 372729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 3640256 - 3640205
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| | |||||  |||||||||||||||||||||||    
T  3640256 gagaaatgatatttgaacatctattttgagacaactttctctctcatactca 3640205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 6865847 - 6865796
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  6865847 gagaaatgatatttgtacaaccactttgtgacaactttctctctcatactca 6865796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 9226313 - 9226364
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| ||||||   |||||||||||||||||||||||    
T  9226313 gagaaatgatatttgaacatccatttaatgacaactttctctctcatactca 9226364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 12203158 - 12203209
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||| ||||    
T  12203158 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctca 12203209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 13734420 - 13734369
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  13734420 gagaaatgatatttgtacaaccactttatgacaactttctctctcatactca 13734369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 39458668 - 39458719
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    |||||||||||| || ||||||| |||| |||||||||||||||||||||||    
T  39458668 gagaaatgatatctgtacaaccagtttttgacaactttctctctcatactca 39458719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 5386081 - 5386132
Alignment:
Q  398 tttgagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    |||||||||||||||||| |||||  ||||  ||||||||||||||||||||||    
T  5386081 tttgagaaatgatatttgtacaac--ttttaaacaactttctctctcatactca 5386132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 6612295 - 6612341
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||| ||||| || ||||| ||||||||||||||||||||    
T  6612295 atttggtttgctactgtgtgagaaatatggaaagaaagaaataacag 6612341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 16610625 - 16610691
Alignment:
Q  311 ctcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagtt 377  Q
    |||||||||| || | |||| | ||||||||||||||||| |||||||| ||||| | |||||||||    
T  16610625 ctcttcccttcaattatcatgggtggtggcttagtccgtttaccattttaggcattggctaatagtt 16610691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 447
Target Start/End: Complemental strand, 16972158 - 16972112
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcata 447  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  16972158 gagaaatgatattttaacaaccattttttacaaccttctctctcata 16972112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 33910147 - 33910097
Alignment:
Q  402 agaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||  ||||||||||  |||||||||||||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctcatactca 33910097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 4926730 - 4926775
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    ||||||||||| ||||| || ||||| |||||||||||||||||||    
T  4926730 atttggtttgctactgtgtgagaaatttggaaagaaagaaataaca 4926775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 7961244 - 7961144
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    |||||||| |||| |||||||| ||| || |||| |||| ||||||||||| |   |||||||||  ||||||| |||| | |||||||||||| |||||    
T  7961244 caggtggtggataggattaagttgctaacattcaagtgg-ttgaaggcgaagtatgctactcttcattttaactatcatggttggtggcttagttcgttc 7961146  T
Q  352 ac 353  Q
    ||    
T  7961145 ac 7961144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 426
Target Start/End: Original strand, 19824118 - 19824147
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattt 426  Q
    ||||||||||||||||||||||||||||||    
T  19824118 ttttgagaaatgatatttgaacaaccattt 19824147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 28306204 - 28306167
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  28306204 tgagaaatgatatttgaacaaccattttttacaacttt 28306167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 38387608 - 38387653
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcg-acaactttctctct 443  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||    
T  38387608 ttgagaaatgatatttgtacaaccatttttgtacaactttctctct 38387653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 7076425 - 7076461
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  7076425 gagaaatgatatttgaacaaccattttttacaacttt 7076461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 33037520 - 33037556
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  33037520 gagaaatgatatttgaacaaccattttttacaacttt 33037556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 33567280 - 33567232
Alignment:
Q  404 aaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  33567280 aaatgatatttgtacaaccactttgtgacaactttctctctcatactca 33567232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 35634907 - 35634871
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||| |||||| |||||||||    
T  35634907 gagaaatgatatttgaacaatcatttttgacaacttt 35634871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 377
Target Start/End: Original strand, 5048393 - 5048609
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtgg 258  Q
    |||||||||||||  ||||||||||| || |||||||| || |||||||||| ||||||||| | ||||| ||||||||| || |||  | |  |||| |    
T  5048393 tcaatttcacaggtcatttggtttgctacagtctgggagatttggaaagaaa-aaataacaggcaatttacggataaaacttgctcggtattaaaggtcg 5048491  T
Q  259 ttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattt 358  Q
    |||||||||||||| | ||| |||| |||||| ||||||| |||||| | ||| |||||||| ||||||||| | |||||||||||||||||||||||      
T  5048492 ttgataagattaagcccctctcttttatgtgg-ttgaaggtgaaattaaatacgcttcccttcaactttcatggttggtggcttagtccgttcaccatac 5048590  T
Q  359 tgggcatagactaatagtt 377  Q
    |||||||||  ||||||||    
T  5048591 tgggcataggttaatagtt 5048609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 168 - 381
Target Start/End: Original strand, 37929022 - 37929234
Alignment:
Q  168 caggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataaga 267  Q
    |||| |||||||||||| || || ||||||| ||||||||||||||||||||| |  ||||  ||  |||  || |  | |  ||||||||| |||| ||    
T  37929022 caggttatttggtttgcgacagtttgggaaacctggaaagaaagaaataacaggcattttaacgactaaatttgcttaataagtcaggtggtcgatagga 37929121  T
Q  268 ttaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatag 367  Q
    ||||||| ||| | || | |||| ||||||| ||||||  |||||||||||||||||| |||| | ||||||||||||||||||||| | || |||||||    
T  37929122 ttaagtctctcgcatttaggtgg-ttgaaggtgaaatttcctactcttccctttaactatcatggttggtggcttagtccgttcaccttgttaggcatag 37929220  T
Q  368 actaatagttattt 381  Q
     || ||||||||||    
T  37929221 gctgatagttattt 37929234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 381
Target Start/End: Complemental strand, 8462613 - 8462485
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||  || |||||||||| || | |||| | ||||||||||||| |||     
T  8462613 caggtggttgataagattaagtcactcacattcatgtgg-ttgaaggcgaaatttgcttctcttcccttcaattatcatggttggtggcttagtctgttt 8462515  T
Q  352 accattttgggcatagactaatagttattt 381  Q
    |||||  ||  ||||| ||||| |||||||    
T  8462514 accatgatgaacataggctaattgttattt 8462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 174 - 354
Target Start/End: Complemental strand, 31686606 - 31686427
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagt 273  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||  ||||  || |||| ||| |  | |  ||||||||| ||||  |||||||    
T  31686606 atttggtttgcgacagtttgggaaatctggaaagaaagaaataacagacattttaacgacaaaatatgcttaataagtcaggtggtcgatagaattaagt 31686507  T
Q  274 cgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacc 354  Q
    | | | |||| | |||| ||||||| ||||||  ||||||||||||||||||  ||| | ||| |||||||||||||||||    
T  31686506 ctcgcgcttttaggtgg-ttgaaggagaaatttcctactcttccctttaactaccatgggtggcggcttagtccgttcacc 31686427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 39211054 - 39211104
Alignment:
Q  402 agaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactca 39211104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 30439565 - 30439514
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  30439565 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 30439514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 37392188 - 37392137
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  37392188 gagaaatgatatttgtacaaccattttttgacaactttctctctcatactca 37392137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 382
Target Start/End: Complemental strand, 39435630 - 39435425
Alignment:
Q  175 tttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtc 274  Q
    |||||||||||| ||| || ||||| |||||||||||||||||||   |||| |  || |||  ||| |||    | |||||||||||||||||||||||    
T  39435630 tttggtttgcaagtgtgtgagaaatttggaaagaaagaaataacatgttattcaatgacaaagaatgctcggttttgcaggtggttgataagattaagtc 39435531  T
Q  275 gctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaata 374  Q
     |||   ||||||||| ||||||||||||||  || ||||| ||||| | | |||| | |||||| | |||| ||||||| || ||| ||||| ||||||    
T  39435530 actcgagttcatgtgg-ttgaaggcgaaatttgcttctctt-cctttcattatcatggttggtggttgagtctgttcacctttctggacataggctaata 39435433  T
Q  375 gttatttt 382  Q
    ||| ||||    
T  39435432 gttttttt 39435425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 157070 - 157116
Alignment:
Q  404 aaatgatatttgaacaaccatttt-cgacaactttctctctcatact 449  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  157070 aaatgatatttgtacaaccattttgcgacaactttctctctcatact 157116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 36675333 - 36675387
Alignment:
Q  398 tttgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||||||| ||||||||||| | |||||||| |||||||||||||    
T  36675333 tttgagaaatgatatttgtacaaccatttttgtacaactttttctctcatactca 36675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 6243043 - 6243096
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||||| |||| |||||| | ||||||||||||||||||||||    
T  6243043 ttgagaaatgatatttgtacaatcatttttgtacaactttctctctcatactca 6243096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 43397777 - 43397817
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  43397777 ttttgagaaatgatatttgaacaaccattttttacaacttt 43397817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 5740845 - 5740794
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||| ||||||||| |||||||||||||    
T  5740845 gagaaatgatatttgtacaaccactttttgacaactttttctctcatactca 5740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 446
Target Start/End: Complemental strand, 9047131 - 9047084
Alignment:
Q  400 tgagaaatgatatttgaacaacca-ttttcgacaactttctctctcat 446  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  9047131 tgagaaatgatatttgtacaaccactttttgacaactttctctctcat 9047084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 13924022 - 13924073
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||| ||||    
T  13924022 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctca 13924073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 16840208 - 16840267
Alignment:
Q  160 caatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    |||||| ||||| ||| ||||||||||||   |||||||| |||||||||||||||||||    
T  16840208 caattttacaggttatctggtttgcaactacgtgggaaatttggaaagaaagaaataaca 16840267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 37657001 - 37657052
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| ||||||   |||||||||||||||||||||||    
T  37657001 gagaaatgatatttgaacatccatttagtgacaactttctctctcatactca 37657052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 41541869 - 41541920
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  ||||||||||||||| |||||||    
T  41541869 gagaaatgatatttgaacatccattttgtgacaactttctctcttatactca 41541920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 41776186 - 41776237
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||| ||||| | ||||||||||||||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactca 41776237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 43776139 - 43776182
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataa 217  Q
    |||||||||||||| || |||||||| |||||||||||||||||    
T  43776139 atttggtttgcaacagtgtgggaaatttggaaagaaagaaataa 43776182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 1590291 - 1590337
Alignment:
Q  175 tttggtttgcaactgtctgggaaatctggaaagaaagaaataacaga 221  Q
    |||||||||| ||||| |||||||| |||||| ||||||||||||||    
T  1590291 tttggtttgctactgtttgggaaatatggaaaaaaagaaataacaga 1590337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 22719438 - 22719476
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  22719438 ttgagaaatgatatttgaacaaccattttttacaacttt 22719476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 27325756 - 27325794
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  27325756 ttgagaaatgatatttgaacaaccattttttacaacttt 27325794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 31249597 - 31249559
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  31249597 ttgagaaatgatatttgaacaaccattttttacaacttt 31249559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 32954853 - 32954903
Alignment:
Q  402 agaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||||    
T  32954853 agaaatgatatttgaacatccattttgtgacaactttctctctgatactca 32954903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 34018807 - 34018845
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttc-gacaacttt 437  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  34018807 tgagaaatgatatttgaacaaccattttctgacaacttt 34018845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 38174295 - 38174242
Alignment:
Q  400 tgagaaatgatatttgaacaaccat--tttcgacaactttctctctcatactca 451  Q
    |||||||||||||||| ||||| ||  ||| |||||||||||||||||||||||    
T  38174295 tgagaaatgatatttgtacaactatcttttagacaactttctctctcatactca 38174242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 1796494 - 1796547
Alignment:
Q  399 ttgagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||| ||||||| |||  ||||||||||| |||||||||||    
T  1796494 ttgagaaatgatatttgtacaaccactttgtgacaactttctttctcatactca 1796547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 427
Target Start/End: Complemental strand, 12284344 - 12284315
Alignment:
Q  398 tttgagaaatgatatttgaacaaccatttt 427  Q
    ||||||||||||||||||||||||||||||    
T  12284344 tttgagaaatgatatttgaacaaccatttt 12284315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 16487610 - 16487651
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctct 441  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  16487610 gagaaatgatatttgaacaaccattttatgacaactttctct 16487651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 32020524 - 32020475
Alignment:
Q  402 agaaatgatatttgaacaacca-ttttcgacaactttctctctcatactc 450  Q
    |||||||||||||| ||||||| |||| || |||||||||||||||||||    
T  32020524 agaaatgatatttgtacaaccattttttgataactttctctctcatactc 32020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 38685814 - 38685859
Alignment:
Q  308 ctactcttccctttaactttcattgctggtggcttagtccgttcac 353  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||    
T  38685814 ctactcttccctttaactatcatggttggtggattagtccgttcac 38685859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 4054358 - 4054322
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaactt 436  Q
    ||||||||||||||||||||||||||||  |||||||    
T  4054358 tgagaaatgatatttgaacaaccattttttacaactt 4054322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 11138910 - 11138958
Alignment:
Q  404 aaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||| ||||| |||||  |||||||||||||||||||||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactttctctctcatactca 11138958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 14710950 - 14710902
Alignment:
Q  404 aaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||| |||| ||||||  |||||||||||||||||||||||    
T  14710950 aaatgatatttgtacaatcattttgtgacaactttctctctcatactca 14710902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 24479236 - 24479272
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||| || ||||||    
T  24479236 gagaaatgatatttgaacaaccatttttgataacttt 24479272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 377
Target Start/End: Complemental strand, 33693093 - 33692876
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtgg 258  Q
    |||||||||||||  || |||||||| |  |||||||| ||||||||||||||||| ||||||| ||||| ||||||||| || |||  | |  ||||||    
T  33693093 tcaatttcacaggtcatctggtttgctatagtctgggagatctggaaagaaagaaacaacagacaatttacggataaaacttgctcggtattataggtgg 33692994  T
Q  259 ttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattt 358  Q
    ||||||||||||||||  || |||| |||||| ||||||| |||||| |  || |||||||| ||||||||| | ||||||||||| |||||||||||      
T  33692993 ttgataagattaagtccatctcttttatgtgg-ttgaaggtgaaatttaacacgcttcccttcaactttcatggttggtggcttagcccgttcaccatgc 33692895  T
Q  359 tgggcatagactaatagtt 377  Q
    |||||||||  ||||||||    
T  33692894 tgggcataggttaatagtt 33692876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 365
Target Start/End: Original strand, 25845645 - 25845759
Alignment:
Q  250 ttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgt 349  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||||||||||| ||  || |||| ||||| ||||  ||| | |||||||||||||| |    
T  25845645 ttcaggtggttgataaaattaagtcgctctctttcatgtgg-ttgaaggcgaagtttccttctctgcccttgaactaccatggttggtggcttagtccat 25845743  T
Q  350 tcaccattttgggcat 365  Q
     |||||||||||||||    
T  25845744 acaccattttgggcat 25845759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 379
Target Start/End: Complemental strand, 9601882 - 9601702
Alignment:
Q  198 atctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttgaag 297  Q
    ||||| |||||||||||||| ||||| ||||  || ||||||||||||  | |||||||| |||| || |||||||| ||||| || |||||| ||||||    
T  9601882 atctgaaaagaaagaaataatagactttttacagacaaaacatgttcggtaattcaggtgtttgacaacattaagtccctcacgtttatgtgg-ttgaag 9601784  T
Q  298 gcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagttat 379  Q
    || || || || | |||| |||| ||  ||||| | |||| ||||||| ||||||||    ||| |||||||||||||||||    
T  9601783 gcaaagtttacaattctttccttcaatcttcatggttggttgcttagttcgttcaccgagctggacatagactaatagttat 9601702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 25408679 - 25408731
Alignment:
Q  167 acaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  25408679 acaggttatttggtttgcaaccgtgtgggaaatctggaaagaaagaaataaca 25408731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 451
Target Start/End: Complemental strand, 29846960 - 29846900
Alignment:
Q  392 ttaaattttgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||  ||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  29846960 ttaaattaagagaaatgatatttgtacaaccatttttgtacaactttctctctcatactca 29846900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 367
Target Start/End: Complemental strand, 20017582 - 20017408
Alignment:
Q  192 tgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggc 291  Q
    |||||||| ||||| |||||||||||||| || || |  ||||||  ||| ||||   |||||||||| || ||||||||||| ||  |||  | ||||     
T  20017582 tgggaaatatggaaggaaagaaataacaggctcttcaatgataaagtatgctcgaattttcaggtggtagaaaagattaagtctcttgcttatacgtgg- 20017484  T
Q  292 ttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatag 367  Q
    ||||||  ||||||   | | |||||||| ||||  ||| ||||||||||| ||||||||||||||||||||||||    
T  20017483 ttgaagaagaaatttgtttcacttcccttaaactaccatggctggtggctttgtccgttcaccattttgggcatag 20017408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 24256831 - 24256780
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||| |||||| ||||| ||||||| |||||||||    
T  24256831 tgagaaatgatatttgaacaatcatttttgacaaatttctctatcatactca 24256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 28700472 - 28700523
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||||||||    
T  28700472 gagaaatgatatttgaacaaccattttttgacaactttatctctcatactca 28700523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 29057659 - 29057710
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  29057659 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactca 29057710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 44781836 - 44781789
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacaga 221  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  44781836 atttggtttgctactgtgtgggaaatttggaaagaaagaaataacaga 44781789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 47683801 - 47683852
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  47683801 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactca 47683852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 49761319 - 49761370
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  49761319 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 49761370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 382
Target Start/End: Complemental strand, 9609830 - 9609653
Alignment:
Q  204 aaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaa 303  Q
    |||||||||||||| ||||| |||| ||| ||||||||||||  | |||||||| |||| || |||||| | ||||| || |||||| |||||| | ||     
T  9609830 aaagaaagaaataatagactttttacggacaaaacatgttcggtaattcaggtgtttgacaacattaaggccctcacgtttatgtgg-ttgaagccaaag 9609732  T
Q  304 ttcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagttatttt 382  Q
    || |   ||||| |||| ||  ||||| | |||| ||||||| ||||||||    | ||||||||||||||||||||||    
T  9609731 tttaagcctctttccttcaatcttcatggttggttgcttagttcgttcaccgagctaggcatagactaatagttatttt 9609653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 19149002 - 19149052
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    |||||||||||||||||||| ||||||  | ||||||||||||||||||||    
T  19149002 gagaaatgatatttgaacaatcattttttataactttctctctcatactca 19149052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 31050593 - 31050639
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  31050593 atttggtttgctactgtgtgggaaacctggaaagaaagaaataacag 31050639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 35503848 - 35503894
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  35503848 atttggtttgctactgtttgggaaatatggaaagaaagaaataacag 35503894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 38957571 - 38957521
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||| ||||| ||||||||| |||||||||||||    
T  38957571 gagaaatgatatttgtacaactatttttgacaactttttctctcatactca 38957521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 381
Target Start/End: Original strand, 25408767 - 25408891
Alignment:
Q  256 tggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacca 355  Q
    |||| ||||||||||||||  | || ||| ||||| |||||||||||||||||| |  || |||| || | |||| | |||||||||||||| || ||||    
T  25408767 tggtcgataagattaagtctataacattcgtgtgg-ttgaaggcgaaattcacttcaatttccttcaattatcatggttggtggcttagtccatttacca 25408865  T
Q  356 ttttgggcatagactaatagttattt 381  Q
    | ||||| |||| ||||| |||||||    
T  25408866 tgttgggtataggctaattgttattt 25408891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 3857790 - 3857743
Alignment:
Q  173 tatttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    |||||||||||||||  | |||||||| ||||||||||||||||||||    
T  3857790 tatttggtttgcaacactgtgggaaatttggaaagaaagaaataacag 3857743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 9753226 - 9753281
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||||||||||| ||||||  ||||| ||| |||||||||||||    
T  9753226 ttttgagaaatgatatttgaacaatcattttgtgacaattttatctctcatactca 9753281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 11234199 - 11234254
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||||||| |||||| | ||||||||| |||||||| ||||    
T  11234199 ttttgagaaatgatatttgaacatccatttactgacaactttttctctcattctca 11234254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 20848314 - 20848267
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacaga 221  Q
    ||||||||||||||||| |||||||| ||||||||||| ||| |||||    
T  20848314 atttggtttgcaactgtatgggaaatatggaaagaaaggaatgacaga 20848267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 21408314 - 21408267
Alignment:
Q  167 acaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaa 214  Q
    ||||| ||||| ||||||||| ||||||||||| ||||||||||||||    
T  21408314 acaggttattttgtttgcaacagtctgggaaatttggaaagaaagaaa 21408267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 31300816 - 31300864
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||  |||| |||||||||||||||||||||||    
T  31300816 gagaaatgatatttgtacaac--ttttagacaactttctctctcatactca 31300864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 35368622 - 35368673
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||| ||||| | ||||||||||||||||||||||    
T  35368622 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactca 35368673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 36803169 - 36803275
Alignment:
Q  264 aagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggc 363  Q
    |||||||| ||||| ||||| |||||| ||||||||||| || || ||| |||| || || ||||||   |||||||||||||||||||| || ||| ||    
T  36803169 aagattaaatcgcttacttttatgtgg-ttgaaggcgaagtttaccactattcctttcaattttcatgcttggtggcttagtccgttcacaatgttgagc 36803267  T
Q  364 atagacta 371  Q
    || |||||    
T  36803268 attgacta 36803275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 43169813 - 43169762
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  ||||||||| |||||||||||||    
T  43169813 gagaaatgatatttgtacaaccattttgtgacaactttttctctcatactca 43169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 46952949 - 46953000
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  46952949 gagaaatgatatttgtacaaccattttttgataactttctctctcatactca 46953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 48490573 - 48490522
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  48490573 gagaaatgatatttgtacaaccacttttgtacaactttctctctcatactca 48490522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 50745560 - 50745611
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| |||| |||||| | ||||||||||||||||||||||    
T  50745560 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactca 50745611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 437
Target Start/End: Complemental strand, 55151786 - 55151751
Alignment:
Q  402 agaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||| |||||||||    
T  55151786 agaaatgatatttgaacaaccatttttgacaacttt 55151751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 55361293 - 55361242
Alignment:
Q  401 gagaaatgatatttgaacaaccattt-tcgacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||| | ||||||||||||||| |||||||    
T  55361293 gagaaatgatatttgtacaaccatttcttgacaactttctctcttatactca 55361242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 16969639 - 16969601
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  16969639 ttgagaaatgatattttaacaaccatttttgacaacttt 16969601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 437
Target Start/End: Original strand, 26014806 - 26014848
Alignment:
Q  395 aattttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||| ||||||||||||||||||||||||||||  ||||||||    
T  26014806 aattatgagaaatgatatttgaacaaccattttttacaacttt 26014848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 37453189 - 37453235
Alignment:
Q  391 tttaaattttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||| | |||||||||||||||||||||||||||  ||||||||    
T  37453189 tttaaatatagagaaatgatatttgaacaaccatttttaacaacttt 37453235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 447
Target Start/End: Complemental strand, 53871091 - 53871045
Alignment:
Q  402 agaaatgatatttgaacaaccatttt-cgacaactttctctctcata 447  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||    
T  53871091 agaaatgatatttgaacaaccattttatgacaattttctctctcata 53871045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 3694908 - 3694855
Alignment:
Q  167 acaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||| ||| ||||||||| |||| |||||||| |||||||||||||| |||||    
T  3694908 acaggttatatggtttgcatctgtatgggaaatttggaaagaaagaaacaacag 3694855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 11453021 - 11452976
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    ||||||||||| | ||| ||| ||||||||||||||||||||||||    
T  11453021 atttggtttgctagtgtgtggaaaatctggaaagaaagaaataaca 11452976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 23553834 - 23553786
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactc 450  Q
    |||||||||||||||||||||  || | ||||||||||||||||||||||    
T  23553834 gagaaatgatatttgaacaacttttgt-gacaactttctctctcatactc 23553786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 451
Target Start/End: Complemental strand, 26548836 - 26548783
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||| ||||||| ||||| ||||| | ||||||||||||||||||||||    
T  26548836 ttgagaaataatatttggacaactattttggtacaactttctctctcatactca 26548783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 32205605 - 32205654
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcgacaactttctctctcatac 448  Q
    |||||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  32205605 ttgagaaatgatatttgaacaatcatgttttacaactttatctctcatac 32205654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 1337899 - 1337847
Alignment:
Q  400 tgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||||||| |||||||  ||||| ||||| |||||||||||    
T  1337899 tgagaaatgatatttgaacatccattttatgacaattttctatctcatactca 1337847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 9719513 - 9719461
Alignment:
Q  400 tgagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||| |||| ||||| |||| ||||||||||||    
T  9719513 tgagaaatgatatttgtacaaccactttttgacaattttccctctcatactca 9719461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 24645371 - 24645419
Alignment:
Q  404 aaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||| |||||||  ||||||||| |||||||||||||    
T  24645371 aaatgatatttgaacatccattttatgacaactttttctctcatactca 24645419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 27541573 - 27541537
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  27541573 gagaaatgatatttgaacaaccattttttacaacttt 27541537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 28884490 - 28884542
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||| ||||||| ||||||||| |  |||||||||||||||||||||||    
T  28884490 tgagaaataatatttgtacaaccattatgtgacaactttctctctcatactca 28884542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 46623907 - 46623943
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  46623907 gagaaatgatatttgaacaaccattttttacaacttt 46623943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 52939653 - 52939689
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  52939653 gagaaatgatatttgaacaaccattttttacaacttt 52939689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 256 - 382
Target Start/End: Original strand, 12688190 - 12688315
Alignment:
Q  256 tggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacca 355  Q
    |||| |||||||||||||| ||||| ||  ||||| ||||||| |||||| ||||||||||||||||| || ||| |||||||||||||||||||| | |    
T  12688190 tggtggataagattaagtccctcacatttgtgtgg-ttgaaggagaaatttactactcttccctttaatttacatggctggtggcttagtccgttcgcaa 12688288  T
Q  356 ttttgggcatagactaatagttatttt 382  Q
    | |||||||||| ||||| ||||||||    
T  12688289 tgttgggcataggctaattgttatttt 12688315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 382
Target Start/End: Original strand, 27105270 - 27105399
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    |||||||| |||||||||||||| ||||| ||  ||||| ||||||| ||| || |||||| |||||||||| || ||| |||||||||||| |||||||    
T  27105270 caggtggtggataagattaagtccctcacatttgtgtgg-ttgaaggagaagtttactactattccctttaatttacatggctggtggcttaatccgttc 27105368  T
Q  352 accattttgggcatagactaatagttatttt 382  Q
    |  || |||||||||| ||||| ||||||||    
T  27105369 aaaatattgggcataggctaattgttatttt 27105399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 382
Target Start/End: Original strand, 27147079 - 27147208
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    |||||||| |||||||||||||| ||||| ||  ||||| ||||||| ||| || |||||| |||||||||| || ||| |||||||||||| |||||||    
T  27147079 caggtggtggataagattaagtccctcacatttgtgtgg-ttgaaggagaagtttactactattccctttaatttacatggctggtggcttaatccgttc 27147177  T
Q  352 accattttgggcatagactaatagttatttt 382  Q
    |  || |||||||||| ||||| ||||||||    
T  27147178 aaaatattgggcataggctaattgttatttt 27147208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 381
Target Start/End: Original strand, 9907156 - 9907285
Alignment:
Q  251 tcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgtt 350  Q
    ||||||||| ||||| |||||||||||| ||||||||||| ||||||| ||||| | || || ||||||| || | ||||   |||||||||| ||| ||    
T  9907156 tcaggtggtagataaaattaagtcgctcgctttcatgtgg-ttgaaggagaaatacccttctattcccttcaattatcatgcgtggtggcttaatccatt 9907254  T
Q  351 caccattttgggcatagactaatagttattt 381  Q
    ||||||||| ||||||| ||||| |||||||    
T  9907255 caccattttaggcataggctaattgttattt 9907285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 381
Target Start/End: Original strand, 22469420 - 22469549
Alignment:
Q  251 tcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgtt 350  Q
    ||||||||| ||||| |||||||||||| ||||||||||| |||||||  |||| | || |||||||||| || | ||||   |||||||||||||| ||    
T  22469420 tcaggtggtagataaaattaagtcgctcgctttcatgtgg-ttgaaggataaatacccttctcttcccttcaattatcatgcttggtggcttagtccatt 22469518  T
Q  351 caccattttgggcatagactaatagttattt 381  Q
    |||||||||| ||||||  |||| |||||||    
T  22469519 caccattttgagcataggttaattgttattt 22469549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 34714917 - 34715042
Alignment:
Q  255 gtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacc 354  Q
    |||||||||||||||||||| |||||||| | |||| ||||| || ||||| ||| |||||||| | || |  ||| | ||||||||||||| ||| |||    
T  34714917 gtggttgataagattaagtctctcacttttaggtgg-ttgaaagcaaaatttacttctcttcccatcaattaccatggttggtggcttagtctgtttacc 34715015  T
Q  355 attttgggcatagactaatagttattt 381  Q
    ||  ||| |||||||||||||||||||    
T  34715016 atactggacatagactaatagttattt 34715042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 18737630 - 18737578
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattttcgacaactttctctctcatact 449  Q
    |||||||||||||||||||||||||||||||  | |||||| |||||||||||    
T  18737630 ttttgagaaatgatatttgaacaaccattttttataactttttctctcatact 18737578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 17292949 - 17292898
Alignment:
Q  168 caggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataaca 219  Q
    |||| ||||||||||||||| || |||||||| |||||||||||||||||||    
T  17292949 caggttatttggtttgcaaccgtatgggaaatttggaaagaaagaaataaca 17292898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 28748124 - 28748175
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  28748124 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactca 28748175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 5667558 - 5667496
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacaga 221  Q
    ||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||| |||||||||    
T  5667558 tcaattttacaggttatttggtttgcaacagtttgggaaatttggaaggaaaggaataacaga 5667496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 367
Target Start/End: Original strand, 11324463 - 11324580
Alignment:
Q  249 cttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccg 348  Q
    |||||| |||| || |||||||||| |||  |||| | |||| ||||||||||||||  || |||||||||| || | |||| | |||||||||||||||    
T  11324463 cttcagatggtagacaagattaagttgcttgcttttacgtgg-ttgaaggcgaaatttgcttctcttcccttcaattatcatgggtggtggcttagtccg 11324561  T
Q  349 ttcaccattttgggcatag 367  Q
    ||  ||||| |||||||||    
T  11324562 tttgccattatgggcatag 11324580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 32533109 - 32533064
Alignment:
Q  308 ctactcttccctttaactttcattgctggtggcttagtccgttcac 353  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||    
T  32533109 ctactcttccctttaactatcatggttggtggcttagtccgttcac 32533064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 6110572 - 6110528
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctca 445  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||    
T  6110572 gagaaatgatatttgtacaatctttttcgacaactttctctctca 6110528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 32644622 - 32644674
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||||||| ||||| |||||  |||||||||||||||||||||||    
T  32644622 tgagaaatgatatttgtacaactattttttgacaactttctctctcatactca 32644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 2060693 - 2060642
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||||    
T  2060693 gagaaatgatatttgaataaccattttatgacaactttttctctcatactca 2060642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 437
Target Start/End: Complemental strand, 8098669 - 8098630
Alignment:
Q  398 tttgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  8098669 tttgagaaatgatatttgaacaaccattttttacaacttt 8098630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 12427287 - 12427236
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||| ||| |||||||||||||||||| |||||||||    
T  12427287 gagaaatgatatttgtacatccacttttcgacaactttctctttcatactca 12427236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 31517240 - 31517189
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||| ||||||||| |||||||||||||    
T  31517240 gagaaatgatatttgtacaaccactttttgacaactttttctctcatactca 31517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 2165360 - 2165310
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactc 450  Q
    ||||||||||||||| ||||||||||| | |||||||| ||||||||||||    
T  2165360 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2165310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 2176993 - 2176943
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactc 450  Q
    ||||||||||||||| ||||||||||| | |||||||| ||||||||||||    
T  2176993 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 372
Target Start/End: Complemental strand, 7824156 - 7824118
Alignment:
Q  334 tggtggcttagtccgttcaccattttgggcatagactaa 372  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  7824156 tggtggcttagcccgttcaccattttgggcataggctaa 7824118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 15974617 - 15974666
Alignment:
Q  397 ttttgagaaatgatatttgaacaaccattttcgacaactttctctctcata 447  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||||    
T  15974617 ttttgagaaatgatatttgaacaa-catttgttacaactttctctctcata 15974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 16121162 - 16121212
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatact 449  Q
    |||||||||||||||| ||||||||||| | |||||||||||| |||||||    
T  16121162 tgagaaatgatatttgtacaaccatttttgtacaactttctctttcatact 16121212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 18672088 - 18672134
Alignment:
Q  308 ctactcttccctttaactttcattgctggtggcttagtccgttcacc 354  Q
    |||||||||||||||||| |||| | |||||||| ||||||||||||    
T  18672088 ctactcttccctttaactatcatggttggtggctgagtccgttcacc 18672134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 22732769 - 22732715
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactattta 228  Q
    |||| |||||||||||| || ||||| ||||||||||||||||| ||| ||||||    
T  22732769 atttcgtttgcaactgtgtgagaaatatggaaagaaagaaataatagaatattta 22732715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 29599352 - 29599302
Alignment:
Q  167 acaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataa 217  Q
    ||||| ||||||||||||||  || |||||||| |||||||||||||||||    
T  29599352 acaggttatttggtttgcaagcgtgtgggaaatttggaaagaaagaaataa 29599302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 451
Target Start/End: Complemental strand, 32135494 - 32135440
Alignment:
Q  398 tttgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||||||| |||| |||||| | |||||||||||| |||||||||    
T  32135494 tttgagaaatgatatttgtacaatcatttttgtacaactttctctatcatactca 32135440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 451
Target Start/End: Complemental strand, 9395399 - 9395346
Alignment:
Q  399 ttgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||||| ||||| ||||| | |||||||||||| |||||||||    
T  9395399 ttgagaaatgatatttgtacaactatttttgtacaactttctctttcatactca 9395346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 9907080 - 9907125
Alignment:
Q  175 tttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||||||   |||||||| ||||||||||||||||||||    
T  9907080 tttggtttgcaacttcgtgggaaatttggaaagaaagaaataacag 9907125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 12688093 - 12688154
Alignment:
Q  159 tcaatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||| ||||| |||||||| |||  || | |||||||||||||||||| ||||||||||    
T  12688093 tcaattttacaggttatttggtatgctgctatgtgggaaatctggaaagaacgaaataacag 12688154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 25811910 - 25811873
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  25811910 tgagaaatgatatttgaacaaccattttttacaacttt 25811873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 34047386 - 34047423
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  34047386 tgagaaatgatatttgaacaaccattttttacaacttt 34047423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 1156721 - 1156757
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  1156721 gagaaatgatatttgaacaaccattttttacaacttt 1156757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 10303345 - 10303297
Alignment:
Q  168 caggatatttggtttgcaactgtctgggaaatctggaaagaaagaaata 216  Q
    |||| |||||||||||| | ||| |||||||| ||||||||||||||||    
T  10303345 caggttatttggtttgctattgtgtgggaaatatggaaagaaagaaata 10303297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 451
Target Start/End: Original strand, 12177572 - 12177628
Alignment:
Q  396 attttgagaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    ||||||||||||| |||||| ||||| |||||  ||||||||||||| |||||||||    
T  12177572 attttgagaaatgttatttgtacaactattttgtgacaactttctctttcatactca 12177628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 381
Target Start/End: Original strand, 14001786 - 14001870
Alignment:
Q  297 ggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagttattt 381  Q
    ||||||||||| || |||| |||| || | |||| | |||||||||||| | || |||||||||||| ||  |||||||||||||    
T  14001786 ggcgaaattcattaatcttgccttcaattatcatagttggtggcttagttcatttaccattttgggcgtaagctaatagttattt 14001870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 14216120 - 14215993
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    |||||| |||||||  |||||||||| || ||||||||| ||||||  ||||||  || |||||| |||  ||| |||| | ||||||||||  || ||     
T  14216120 caggtgattgataaagttaagtcgctgacgttcatgtgg-ttgaagaagaaatttccttctcttctcttcgactatcatagttggtggcttaaccctttt 14216022  T
Q  352 accattttgggcatagactaatagttatt 380  Q
    ||||| ||||| |||| ||||||||||||    
T  14216021 accatgttgggaataggctaatagttatt 14215993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 22079634 - 22079598
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  22079634 gagaaatgatatttgaacaaccattttttacaacttt 22079598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 327
Target Start/End: Complemental strand, 4998108 - 4997969
Alignment:
Q  186 actgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttca 285  Q
    ||||| ||| |||||||||||||||||||||||| | | || |  |||||||| ||  ||| | |||||||||| |||||||||||||| |||||||| |    
T  4998108 actgtatggaaaatctggaaagaaagaaataaca-attgttcacagataaaacttgcccgataattcaggtggtggataagattaagtccctcactttta 4998010  T
Q  286 tgtggcttgaaggcgaaattcactactcttccctttaacttt 327  Q
    ||||| |||||||||||||| |||||| ||| ||| ||||||    
T  4998009 tgtgg-ttgaaggcgaaatttactactattctcttcaacttt 4997969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 377
Target Start/End: Original strand, 41529326 - 41529513
Alignment:
Q  189 gtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggttgataagattaagtcgctcactttcatgt 288  Q
    |||| ||| ||||||||||||||||| ||||| | ||||| ||||||||  || |||    | |||||||||||||||||||||||  || |||| ||||    
T  41529326 gtctaggagatctggaaagaaagaaacaacaggcaatttacggataaaaattgctcggttttacaggtggttgataagattaagtccatctcttttatgt 41529425  T
Q  289 ggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttgggcatagactaatagtt 377  Q
    || ||||||  |||||| |  || |||||||| || |||||| | ||||| |||||||||||||||||  |||||||||  ||||||||    
T  41529426 gg-ttgaagatgaaatttaacacgcttcccttcaattttcatggttggtgacttagtccgttcaccatgctgggcataggttaatagtt 41529513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 26749017 - 26749067
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  26749017 gagaaatgatatttgaacaacaatttttgacaactttctctctcatactca 26749067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 381
Target Start/End: Original strand, 38153903 - 38154032
Alignment:
Q  251 tcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgtt 350  Q
    ||||||||| |||| ||||||||| ||| |||| | |||| ||||||| ||||||  ||||||||||||||||||  ||| | ||||||||||||| |||    
T  38153903 tcaggtggtcgataggattaagtctctcgcttttaggtgg-ttgaaggtgaaatttcctactcttccctttaactaccatagatggtggcttagtctgtt 38154001  T
Q  351 caccattttgggcatagactaatagttattt 381  Q
    |||| | || |||||||  | ||||||||||    
T  38154002 caccttgttaggcataggttgatagttattt 38154032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 17116500 - 17116375
Alignment:
Q  255 gtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacc 354  Q
    |||||||||||||||||||| ||| | || |||||| |||||||||||||   || |||||||||| |  | |||| | ||||||||||||| ||| |||    
T  17116500 gtggttgataagattaagtcactcgcatttatgtgg-ttgaaggcgaaatatgcttctcttcccttcagttatcatggttggtggcttagtctgtttacc 17116402  T
Q  355 attttgggcatagactaatagttattt 381  Q
    || ||||| |||  |||||||||||||    
T  17116401 atattgggtataagctaatagttattt 17116375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 255 - 366
Target Start/End: Original strand, 24563147 - 24563259
Alignment:
Q  255 gtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcact--actcttccctttaactttcattgctggtggcttagtccgttca 352  Q
    |||||||||||||||||||| |||||||| || ||| |||||| ||| |||   |  ||| ||| |||||||||| || |||||||||||||||||||||    
T  24563147 gtggttgataagattaagtcactcacttttatatgg-ttgaagacgagattttttcaacttttctctttaacttttatggctggtggcttagtccgttca 24563245  T
Q  353 ccattttgggcata 366  Q
    ||||| || |||||    
T  24563246 ccattctgagcata 24563259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 41989801 - 41989751
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  41989801 gagaaatgatattttaacaaccattttttacaactttctctctcatactca 41989751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 43942649 - 43942699
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctctctcatactca 451  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  43942649 gagaaatgatatttgaacaactattttttacaactttctctctcatactca 43942699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 7817650 - 7817700
Alignment:
Q  402 agaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  7817650 agaaatgatatttgaacatccattttgtgacaactttctctctcatactca 7817700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 451
Target Start/End: Complemental strand, 33465106 - 33465048
Alignment:
Q  394 aaattttgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||| |||||||||||||||| ||||||||||| | |||| |||||||||||||||||    
T  33465106 aaattatgagaaatgatatttgtacaaccatttttgtacaattttctctctcatactca 33465048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 12092675 - 12092787
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    |||||||| |||||||||||||| ||  | ||||||||| ||||||||||||||  |  |||||||||| |||| |||| | | |||||||||||| ||     
T  12092675 caggtggtagataagattaagtcactttccttcatgtgg-ttgaaggcgaaattttcctctcttcccttaaactatcatggatagtggcttagtccattt 12092773  T
Q  352 accattttgggcat 365  Q
    || || ||||||||    
T  12092774 actatgttgggcat 12092787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 8459613 - 8459665
Alignment:
Q  400 tgagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  8459613 tgagaaatgatatttgtacaaccactttttaacaactttctctctcatactca 8459665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 13152593 - 13152629
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13152593 gagaaatgatatttgaacaaccatttttgacaacttt 13152629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 373
Target Start/End: Complemental strand, 23710665 - 23710454
Alignment:
Q  161 aatttcacaggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacagactatttatggataaaacatgttcgacacttcaggtggtt 260  Q
    ||||| ||||| ||| |||||||| || || ||| |||| ||||| | || |||||| || || ||||| |||||| |||  |||   |||||| ||||     
T  23710665 aattttacaggttatatggtttgctacagtttggaaaatttggaagggaataaataataggctttttatagataaatcatactcggttcttcagatggtg 23710566  T
Q  261 gataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccattttg 360  Q
    |||||||| |||| |||| | ||  ||||| ||||||||||||||| || |||||||||| |  || ||| | ||||  |||||||||||||||||  ||    
T  23710565 gataagataaagttgctcgcatttgtgtgg-ttgaaggcgaaattcgcttctcttcccttcagtttacatggttggtcacttagtccgttcaccatgatg 23710467  T
Q  361 ggcatagactaat 373  Q
    | ||||| |||||    
T  23710466 gacataggctaat 23710454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 27866598 - 27866546
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||||||| | |||||||| |||||||||||||    
T  27866598 tgagaaatgatatttgtacaaccatttttgtacaactttatctctcatactca 27866546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 441
Target Start/End: Complemental strand, 47391385 - 47391345
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaactttctct 441  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  47391385 gagaaatgatatttgaacaaccatttttaacaactttctct 47391345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 2323304 - 2323355
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||| |||||  |||||||||||||||||||||||    
T  2323304 gagaaatgatatttgtacaacaattttatgacaactttctctctcatactca 2323355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 2469703 - 2469754
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  2469703 gagaaatgatatttgtacaaccactttgtgacaactttctctctcatactca 2469754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 3937181 - 3937130
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| | |||||  |||||||||||||||||||||||    
T  3937181 gagaaatgatatttgaacatctattttgtgacaactttctctctcatactca 3937130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 6822593 - 6822542
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||||||||||    
T  6822593 gagaaatgatatttgtacaaccattttctaacaactttttctctcatactca 6822542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 9628120 - 9628167
Alignment:
Q  173 tatttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||||||| || |||||||| |||||||| |||||||||||    
T  9628120 tatttggtttgcaacagtgtgggaaatttggaaagagagaaataacag 9628167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 11353033 - 11352982
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| | |||||  |||||||||||||||||||||||    
T  11353033 gagaaatgatatttgaacatcaattttgtgacaactttctctctcatactca 11352982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 22330691 - 22330640
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  22330691 gagaaatgatatttgtacaaccactttgtgacaactttctctctcatactca 22330640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 33224835 - 33224886
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| | |||||  |||||||||||||||||||||||    
T  33224835 gagaaatgatatttgaacatctattttgtgacaactttctctctcatactca 33224886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 381
Target Start/End: Original strand, 34237151 - 34237281
Alignment:
Q  250 ttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgt 349  Q
    ||||||||||||| || |||||||| |||  |||   |||| ||||||||||||||   || | ||||||| || | |||| | |||||||||||||| |    
T  34237151 ttcaggtggttgacaaaattaagtctctcgttttttggtgg-ttgaaggcgaaatttcatattattcccttcaattatcatggttggtggcttagtcctt 34237249  T
Q  350 tcaccattttgggcatagactaatagttattt 381  Q
    ||||||| |||||||||| |||| | ||||||    
T  34237250 tcaccatgttgggcataggctaaaaattattt 34237281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 37352050 - 37351999
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  37352050 gagaaatgatatttgtacaaccactttgtgacaactttctctctcatactca 37351999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 447
Target Start/End: Complemental strand, 45420120 - 45420073
Alignment:
Q  401 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcata 447  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||    
T  45420120 gagaaatgatatttgaacaactattttttgacaactttctctctcata 45420073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 47078310 - 47078259
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||||||| | |||||  |||||||||||||||||||||||    
T  47078310 gagaaatgatatttgaacatctattttatgacaactttctctctcatactca 47078259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 3062343 - 3062393
Alignment:
Q  402 agaaatgatatttgaacaaccatttt-cgacaactttctctctcatactca 451  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||||    
T  3062343 agaaatgatatttgaacatccattttgtgacaactttctctcttatactca 3062393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 451
Target Start/End: Original strand, 8742391 - 8742445
Alignment:
Q  398 tttgagaaatgatatttgaacaaccat-tttcgacaactttctctctcatactca 451  Q
    |||||||||||||||||| ||||| || ||| ||||||||| |||||||||||||    
T  8742391 tttgagaaatgatatttgtacaactatgttttgacaactttttctctcatactca 8742445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 16560012 - 16560058
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||| || || |||||||| ||||||||||||||||||||    
T  16560012 atttggtttgctacggtgtgggaaatatggaaagaaagaaataacag 16560058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 16605650 - 16605604
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||| || || |||||||| ||||||||||||||||||||    
T  16605650 atttggtttgctacggtgtgggaaatatggaaagaaagaaataacag 16605604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 37237977 - 37237931
Alignment:
Q  174 atttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    ||||||||||| ||||| |||||||| || |||||||||||||||||    
T  37237977 atttggtttgctactgtgtgggaaatatgtaaagaaagaaataacag 37237931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 449
Target Start/End: Complemental strand, 37848681 - 37848631
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatact 449  Q
    |||||||||||||||| |||| |||||| | ||||||||||||||||||||    
T  37848681 tgagaaatgatatttgtacaatcatttttgtacaactttctctctcatact 37848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 31329423 - 31329386
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  31329423 tgagaaattatatttgtacaaccattttcgacaacttt 31329386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 40616779 - 40616734
Alignment:
Q  308 ctactcttccctttaactttcattgctggtggcttagtccgttcac 353  Q
    |||||||||||||||||| || | | ||||||||||||||||||||    
T  40616779 ctactcttccctttaactatcttggttggtggcttagtccgttcac 40616734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 43444635 - 43444684
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatact 449  Q
    ||||||||||||||| ||||||| |||  |||||||||||||||||||||    
T  43444635 gagaaatgatatttgtacaaccactttatgacaactttctctctcatact 43444684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 47543425 - 47543537
Alignment:
Q  252 caggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttc 351  Q
    |||||||| || ||||||||||||||  |||| | |||| |||||| |||| || | | |||||||||| || | |||| | || ||||||||||||||     
T  47543425 caggtggtcgacaagattaagtcgcttgcttttacgtgg-ttgaagacgaagtttagttctcttcccttcaattatcatgggtgatggcttagtccgttt 47543523  T
Q  352 accattttgggcat 365  Q
    |||||||| |||||    
T  47543524 accattttaggcat 47543537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 9491026 - 9490974
Alignment:
Q  168 caggatatttggtttgcaactgtctgggaaatctggaaagaaagaaataacag 220  Q
    |||| |||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  9491026 caggttatttggtttgcaacactgtggaaaatttggaaagaaagaaataacag 9490974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 25192955 - 25192919
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  25192955 gagaaatgatatttgaacaaccattttttacaacttt 25192919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 25272601 - 25272653
Alignment:
Q  400 tgagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    |||||||||||||||| ||||||||||| | |||||||||||||  |||||||    
T  25272601 tgagaaatgatatttgtacaaccatttttgtacaactttctctcatatactca 25272653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 30941386 - 30941422
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  30941386 gagaaatgatatttgaacaaccattttttacaacttt 30941422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 451
Target Start/End: Original strand, 35293123 - 35293179
Alignment:
Q  396 attttgagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactca 451  Q
    |||| ||||||||||||||||||| ||| |||| ||||||||||| ||| |||||||    
T  35293123 atttagagaaatgatatttgaacatccattttttgacaactttctttcttatactca 35293179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 40347982 - 40348105
Alignment:
Q  256 tggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcacca 355  Q
    |||| ||||| ||||||||||| || ||||||||| ||||||||||| ||  |   |||||| || |||| |||| | || |||||||  || ||||| |    
T  40347982 tggtagataaaattaagtcgctgacgttcatgtgg-ttgaaggcgaagtttccatttcttcctttcaactatcatggttgatggcttaaccctttcacta 40348080  T
Q  356 ttttgggcatagactaatagttatt 380  Q
    | |||| ||||||||||||||||||    
T  40348081 tgttggacatagactaatagttatt 40348105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 41538468 - 41538508
Alignment:
Q  387 tagttttaaattttgagaaatgatatttgaacaaccatttt 427  Q
    ||||||||||||  ||||||||||||||| |||||||||||    
T  41538468 tagttttaaattaagagaaatgatatttgtacaaccatttt 41538508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 42017867 - 42017907
Alignment:
Q  334 tggtggcttagtccgttcaccattttgggcatagactaata 374  Q
    |||||||||||||||||||| || |||||||||| ||||||    
T  42017867 tggtggcttagtccgttcactatgttgggcataggctaata 42017907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 44189383 - 44189355
Alignment:
Q  399 ttgagaaatgatatttgaacaaccatttt 427  Q
    |||||||||||||||||||||||||||||    
T  44189383 ttgagaaatgatatttgaacaaccatttt 44189355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 44895643 - 44895607
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  44895643 gagaaatgatatttgaacaaccattttttacaacttt 44895607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 64388 - 64273
Alignment:
Q  251 tcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgtt 350  Q
    ||||||||| ||||| |||||||| ||| ||||| ||||| ||||||| ||||| | || ||||| |||| || | ||||   |||||||||||||| ||    
T  64388 tcaggtggtagataaaattaagtccctcgctttcttgtgg-ttgaaggagaaatacccttctctttccttcaattatcatgcttggtggcttagtccttt 64290  T
Q  351 caccattttgggcatag 367  Q
    |||||||||||||||||    
T  64289 caccattttgggcatag 64273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 24489 - 24603
Alignment:
Q  260 tgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgttcaccatttt 359  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||  || |||||||||| ||   |||| | |||||| ||||| | ||||| || ||    
T  24489 tgataaaattaagtcgctaactttcatgtgg-ttgaaggcgaaatttccttctcttcccttcaatcatcatagttggtggtttagttcattcactatatt 24587  T
Q  360 gggcatagactaatag 375  Q
     ||||||| |||||||    
T  24588 aggcataggctaatag 24603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 31660 - 31609
Alignment:
Q  401 gagaaatgatatttgaacaaccattttc-gacaactttctctctcatactca 451  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  31660 gagaaatgatatttgtacaaccattttttgacaactttctctctcatactca 31609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 44786 - 44835
Alignment:
Q  401 gagaaatgatatttgaacaaccatttt-cgacaactttctctctcatact 449  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  44786 gagaaatgatatttgaacatccattttgtgacaactttctctctcatact 44835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 350
Target Start/End: Original strand, 6502 - 6601
Alignment:
Q  250 ttcaggtggttgataagattaagtcgctcactttcatgtggcttgaaggcgaaattcactactcttccctttaactttcattgctggtggcttagtccgt 349  Q
    |||||||||| |||| |||||||| ||| |||||||  ||| || |||| ||| || || |||||||||||||||| |||| | |||||||| |||||||    
T  6502 ttcaggtggtagataggattaagttgctaactttcaattgg-ttaaaggtgaagtttacaactcttccctttaactatcatggttggtggctaagtccgt 6600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 3331 - 3280
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactca 451  Q
    ||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  3331 gagaaatgatatttgtacaaccactttctcacaactttctctctcatactca 3280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 17049 - 17099
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcg-acaactttctctctcatactc 450  Q
    ||||||||||||||| ||||||||||| | |||||||| ||||||||||||    
T  17049 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 17099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 165473 - 165509
Alignment:
Q  401 gagaaatgatatttgaacaaccattttcgacaacttt 437  Q
    |||||||||||||||||||||||||||  ||||||||    
T  165473 gagaaatgatatttgaacaaccatttttaacaacttt 165509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University