View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3884_high_8 (Length: 344)

Name: NF3884_high_8
Description: NF3884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3884_high_8
NF3884_high_8
[»] chr2 (86 HSPs)
chr2 (1-329)||(37737637-37737963)
chr2 (223-344)||(18254095-18254216)
chr2 (224-344)||(41195648-41195768)
chr2 (220-342)||(2076635-2076757)
chr2 (223-344)||(32477396-32477517)
chr2 (223-344)||(41042318-41042439)
chr2 (220-344)||(43487443-43487567)
chr2 (223-344)||(9194305-9194426)
chr2 (223-344)||(9647196-9647317)
chr2 (225-344)||(3838768-3838887)
chr2 (222-344)||(1248750-1248872)
chr2 (226-344)||(9207654-9207772)
chr2 (223-329)||(22888703-22888809)
chr2 (223-344)||(9760082-9760203)
chr2 (223-344)||(9990755-9990876)
chr2 (223-340)||(42421784-42421901)
chr2 (226-341)||(34944979-34945094)
chr2 (228-337)||(6049236-6049343)
chr2 (215-344)||(21611533-21611665)
chr2 (224-344)||(27490617-27490737)
chr2 (228-344)||(42091393-42091511)
chr2 (224-344)||(1907650-1907770)
chr2 (219-338)||(3097743-3097856)
chr2 (224-343)||(7663954-7664072)
chr2 (225-344)||(7698235-7698354)
chr2 (237-344)||(19108993-19109100)
chr2 (219-310)||(25270464-25270555)
chr2 (219-310)||(41056629-41056720)
chr2 (219-338)||(13333052-13333165)
chr2 (225-344)||(19633346-19633466)
chr2 (225-344)||(19830247-19830367)
chr2 (220-344)||(39147830-39147954)
chr2 (229-344)||(19642662-19642777)
chr2 (223-344)||(22416277-22416386)
chr2 (279-338)||(23690450-23690509)
chr2 (217-344)||(28494924-28495051)
chr2 (225-344)||(44977387-44977506)
chr2 (230-344)||(42430714-42430828)
chr2 (223-344)||(31296602-31296723)
chr2 (264-344)||(6511315-6511395)
chr2 (229-337)||(14255374-14255482)
chr2 (264-336)||(44287369-44287441)
chr2 (224-343)||(18846676-18846795)
chr2 (223-344)||(1352453-1352574)
chr2 (222-338)||(8848582-8848696)
chr2 (257-337)||(8427624-8427704)
chr2 (294-337)||(7503964-7504007)
chr2 (225-328)||(44654704-44654807)
chr2 (274-344)||(16011496-16011566)
chr2 (289-335)||(17569658-17569704)
chr2 (226-344)||(29349570-29349688)
chr2 (279-344)||(33583164-33583227)
chr2 (279-344)||(12070912-12070977)
chr2 (223-344)||(16973647-16973768)
chr2 (280-325)||(22445967-22446012)
chr2 (223-344)||(44050080-44050200)
chr2 (224-344)||(13711253-13711373)
chr2 (293-344)||(5427178-5427229)
chr2 (225-336)||(7258449-7258560)
chr2 (279-338)||(10216920-10216979)
chr2 (297-344)||(14328446-14328493)
chr2 (223-344)||(10833533-10833652)
chr2 (306-344)||(13766278-13766316)
chr2 (299-329)||(14876796-14876826)
chr2 (258-344)||(31414974-31415060)
chr2 (108-166)||(31640434-31640492)
chr2 (229-329)||(3412446-3412547)
chr2 (299-344)||(5361858-5361903)
chr2 (299-332)||(14871715-14871748)
chr2 (303-344)||(18737839-18737880)
chr2 (303-344)||(19843549-19843590)
chr2 (303-344)||(29449276-29449317)
chr2 (300-337)||(31578506-31578543)
chr2 (300-337)||(32944466-32944503)
chr2 (297-338)||(34119612-34119653)
chr2 (307-344)||(36774603-36774640)
chr2 (279-336)||(42821444-42821500)
chr2 (304-344)||(7084681-7084721)
chr2 (288-344)||(10521308-10521364)
chr2 (294-334)||(11965868-11965908)
chr2 (297-337)||(17395036-17395076)
chr2 (279-327)||(18300839-18300887)
chr2 (271-327)||(33273521-33273577)
chr2 (255-338)||(34134688-34134772)
chr2 (223-338)||(37037310-37037423)
chr2 (225-277)||(42434250-42434302)
[»] chr1 (90 HSPs)
chr1 (223-344)||(19055645-19055766)
chr1 (224-344)||(33100872-33100992)
chr1 (223-344)||(649833-649954)
chr1 (225-344)||(48470703-48470822)
chr1 (219-344)||(44519033-44519158)
chr1 (220-344)||(26469423-26469547)
chr1 (222-341)||(27464942-27465061)
chr1 (229-340)||(35369768-35369879)
chr1 (222-344)||(31088245-31088367)
chr1 (223-344)||(23645475-23645596)
chr1 (225-341)||(3981914-3982030)
chr1 (225-344)||(50726136-50726255)
chr1 (225-344)||(37619608-37619727)
chr1 (223-344)||(37274919-37275040)
chr1 (223-344)||(43775270-43775391)
chr1 (222-329)||(45121366-45121472)
chr1 (231-341)||(50932373-50932481)
chr1 (231-344)||(3851222-3851335)
chr1 (223-344)||(51718516-51718633)
chr1 (223-338)||(45640372-45640486)
chr1 (219-344)||(44914453-44914579)
chr1 (225-341)||(8350087-8350200)
chr1 (224-344)||(52576188-52576309)
chr1 (225-344)||(2571698-2571819)
chr1 (223-344)||(18434859-18434980)
chr1 (228-335)||(45333784-45333891)
chr1 (225-343)||(15082939-15083056)
chr1 (218-316)||(21401490-21401588)
chr1 (222-344)||(30467418-30467540)
chr1 (223-344)||(9566846-9566967)
chr1 (225-344)||(37685395-37685512)
chr1 (225-344)||(37700006-37700123)
chr1 (225-344)||(15469945-15470063)
chr1 (224-338)||(8828011-8828122)
chr1 (271-344)||(27533418-27533491)
chr1 (256-344)||(14983837-14983925)
chr1 (224-344)||(30735180-30735300)
chr1 (224-344)||(31827015-31827135)
chr1 (229-344)||(40861154-40861267)
chr1 (219-338)||(46907271-46907384)
chr1 (223-343)||(50149011-50149131)
chr1 (224-344)||(50775043-50775163)
chr1 (226-344)||(9988016-9988134)
chr1 (225-338)||(51571234-51571347)
chr1 (224-344)||(10627697-10627817)
chr1 (231-338)||(26020970-26021077)
chr1 (229-344)||(39712443-39712558)
chr1 (226-344)||(49065253-49065371)
chr1 (271-344)||(3159440-3159513)
chr1 (264-344)||(12657286-12657367)
chr1 (255-344)||(48261204-48261293)
chr1 (224-337)||(49647038-49647150)
chr1 (255-343)||(4776821-4776909)
chr1 (273-344)||(6693223-6693292)
chr1 (231-327)||(6809661-6809757)
chr1 (224-344)||(11597701-11597821)
chr1 (108-175)||(14490573-14490640)
chr1 (226-344)||(30570590-30570706)
chr1 (225-327)||(19947632-19947734)
chr1 (274-344)||(37985323-37985393)
chr1 (219-344)||(2269454-2269579)
chr1 (279-344)||(39849095-39849160)
chr1 (303-344)||(49570061-49570102)
chr1 (225-344)||(4466759-4466877)
chr1 (223-338)||(18512229-18512344)
chr1 (281-344)||(25509123-25509186)
chr1 (281-344)||(48858888-48858951)
chr1 (223-261)||(41677222-41677260)
chr1 (223-277)||(50333339-50333393)
chr1 (279-336)||(29877370-29877427)
chr1 (280-337)||(30745058-30745115)
chr1 (280-337)||(30766509-30766566)
chr1 (225-333)||(48103250-48103361)
chr1 (296-344)||(51080049-51080097)
chr1 (297-344)||(26208193-26208240)
chr1 (266-344)||(29359703-29359779)
chr1 (279-338)||(33070673-33070732)
chr1 (223-338)||(44517847-44517962)
chr1 (253-344)||(49660244-49660335)
chr1 (297-338)||(611595-611636)
chr1 (215-260)||(29359773-29359818)
chr1 (279-344)||(31975056-31975120)
chr1 (303-344)||(34818010-34818051)
chr1 (297-338)||(41070893-41070934)
chr1 (297-338)||(47721479-47721520)
chr1 (297-338)||(47728471-47728512)
chr1 (229-338)||(50239056-50239165)
chr1 (299-343)||(23665687-23665731)
chr1 (303-339)||(35136913-35136949)
chr1 (279-315)||(51436621-51436657)
[»] chr5 (62 HSPs)
chr5 (220-344)||(26791127-26791251)
chr5 (225-344)||(33037584-33037703)
chr5 (222-344)||(1671606-1671728)
chr5 (225-344)||(7287077-7287196)
chr5 (222-344)||(36739012-36739134)
chr5 (220-344)||(1274422-1274545)
chr5 (220-344)||(41321319-41321443)
chr5 (224-344)||(5168247-5168367)
chr5 (225-344)||(28306020-28306139)
chr5 (223-344)||(18258679-18258800)
chr5 (223-344)||(28467339-28467460)
chr5 (224-344)||(35634722-35634843)
chr5 (225-344)||(15479533-15479652)
chr5 (228-338)||(2972394-2972504)
chr5 (224-338)||(14051202-14051316)
chr5 (225-341)||(14923140-14923256)
chr5 (233-344)||(7076464-7076575)
chr5 (226-340)||(1764292-1764406)
chr5 (226-344)||(13168586-13168704)
chr5 (223-344)||(8686955-8687076)
chr5 (223-344)||(39591744-39591865)
chr5 (223-344)||(39592136-39592257)
chr5 (222-344)||(39054651-39054773)
chr5 (223-336)||(22972189-22972302)
chr5 (219-338)||(17626062-17626175)
chr5 (253-344)||(33958175-33958266)
chr5 (223-344)||(7552853-7552972)
chr5 (225-343)||(18660824-18660941)
chr5 (284-344)||(19521950-19522010)
chr5 (226-344)||(42174985-42175101)
chr5 (223-344)||(13309947-13310068)
chr5 (223-344)||(35646447-35646556)
chr5 (229-344)||(19952064-19952179)
chr5 (108-175)||(37645174-37645241)
chr5 (108-175)||(37826849-37826916)
chr5 (224-302)||(3565190-3565268)
chr5 (218-344)||(33599027-33599152)
chr5 (279-344)||(21943637-21943702)
chr5 (279-344)||(39807655-39807720)
chr5 (224-344)||(4719715-4719835)
chr5 (256-344)||(35567565-35567653)
chr5 (108-175)||(37720987-37721054)
chr5 (274-344)||(1079889-1079959)
chr5 (274-336)||(27487959-27488021)
chr5 (303-344)||(884506-884547)
chr5 (284-337)||(34546487-34546540)
chr5 (279-344)||(35649930-35649994)
chr5 (297-338)||(42643170-42643211)
chr5 (279-327)||(20270650-20270698)
chr5 (297-344)||(31683455-31683502)
chr5 (108-175)||(37597294-37597361)
chr5 (279-338)||(41699524-41699583)
chr5 (279-344)||(6596397-6596460)
chr5 (297-331)||(8097329-8097363)
chr5 (297-338)||(20770201-20770242)
chr5 (297-338)||(29463066-29463107)
chr5 (303-344)||(31748401-31748442)
chr5 (297-338)||(36563012-36563053)
chr5 (300-344)||(611929-611973)
chr5 (255-338)||(6940067-6940151)
chr5 (300-344)||(13089744-13089788)
chr5 (288-344)||(22649612-22649668)
[»] chr3 (107 HSPs)
chr3 (223-344)||(27541388-27541509)
chr3 (228-344)||(42358529-42358645)
chr3 (225-344)||(16969454-16969573)
chr3 (223-344)||(38926692-38926813)
chr3 (224-341)||(52939718-52939835)
chr3 (225-344)||(19149054-19149173)
chr3 (226-344)||(35597226-35597344)
chr3 (224-342)||(41309183-41309301)
chr3 (222-344)||(46623971-46624093)
chr3 (223-344)||(44856017-44856138)
chr3 (224-340)||(52254025-52254141)
chr3 (225-344)||(26014876-26014995)
chr3 (225-344)||(36670902-36671021)
chr3 (225-344)||(47472393-47472512)
chr3 (221-344)||(52326083-52326206)
chr3 (223-344)||(5114142-5114263)
chr3 (225-338)||(37503635-37503748)
chr3 (225-341)||(42356972-42357086)
chr3 (223-344)||(33939300-33939423)
chr3 (225-344)||(288790-288909)
chr3 (248-343)||(20547901-20547996)
chr3 (219-338)||(37056939-37057058)
chr3 (225-344)||(44413283-44413402)
chr3 (226-344)||(24256660-24256778)
chr3 (222-344)||(35376966-35377088)
chr3 (225-321)||(32924169-32924265)
chr3 (229-344)||(5244293-5244408)
chr3 (223-344)||(7668074-7668194)
chr3 (218-338)||(13348015-13348135)
chr3 (225-344)||(7934039-7934157)
chr3 (223-344)||(31157563-31157684)
chr3 (223-344)||(37302610-37302731)
chr3 (224-337)||(55151604-55151717)
chr3 (253-344)||(45711355-45711446)
chr3 (108-213)||(10829165-10829270)
chr3 (228-344)||(8847174-8847289)
chr3 (264-344)||(41505555-41505635)
chr3 (219-310)||(21217610-21217701)
chr3 (225-295)||(13735843-13735913)
chr3 (219-311)||(44383286-44383378)
chr3 (221-329)||(44813215-44813323)
chr3 (221-344)||(51982163-51982286)
chr3 (226-344)||(28539629-28539747)
chr3 (226-338)||(23592534-23592640)
chr3 (271-344)||(45000127-45000200)
chr3 (226-330)||(35201323-35201427)
chr3 (266-344)||(33791699-33791777)
chr3 (223-313)||(44445389-44445479)
chr3 (223-344)||(6178311-6178432)
chr3 (223-338)||(23770631-23770746)
chr3 (213-343)||(46965976-46966106)
chr3 (264-344)||(44413849-44413927)
chr3 (279-344)||(55361175-55361240)
chr3 (228-344)||(39629729-39629845)
chr3 (219-294)||(23600707-23600782)
chr3 (221-344)||(44463421-44463544)
chr3 (299-337)||(19150281-19150319)
chr3 (229-343)||(27511790-27511903)
chr3 (226-344)||(50559101-50559218)
chr3 (225-326)||(14226593-14226694)
chr3 (225-338)||(42889055-42889168)
chr3 (300-344)||(9692790-9692834)
chr3 (292-344)||(50314689-50314741)
chr3 (223-310)||(25641469-25641556)
chr3 (279-334)||(32145927-32145982)
chr3 (297-344)||(34456855-34456902)
chr3 (229-340)||(42997353-42997464)
chr3 (254-344)||(536192-536282)
chr3 (300-334)||(31104739-31104773)
chr3 (302-344)||(39338692-39338734)
chr3 (303-337)||(41443156-41443190)
chr3 (296-338)||(48346897-48346939)
chr3 (279-344)||(34627823-34627888)
chr3 (264-344)||(50318316-50318390)
chr3 (279-344)||(50876304-50876369)
chr3 (303-344)||(52714798-52714839)
chr3 (271-343)||(16129587-16129659)
chr3 (279-327)||(35299816-35299864)
chr3 (115-159)||(39771115-39771159)
chr3 (304-344)||(48353061-48353101)
chr3 (297-344)||(6093838-6093885)
chr3 (297-344)||(9311105-9311152)
chr3 (254-344)||(19960551-19960639)
chr3 (297-344)||(28700525-28700572)
chr3 (225-260)||(41505627-41505662)
chr3 (230-325)||(54007545-54007640)
chr3 (258-344)||(37035446-37035532)
chr3 (306-344)||(54099325-54099363)
chr3 (303-344)||(1436881-1436922)
chr3 (300-337)||(4494199-4494236)
chr3 (229-338)||(12762581-12762690)
chr3 (297-338)||(22237217-22237258)
chr3 (279-344)||(26452664-26452729)
chr3 (297-338)||(26772439-26772480)
chr3 (303-344)||(36756016-36756057)
chr3 (297-338)||(37894201-37894242)
chr3 (223-277)||(42478088-42478144)
chr3 (279-344)||(42672776-42672841)
chr3 (271-320)||(49087041-49087090)
chr3 (297-325)||(3648661-3648689)
chr3 (229-344)||(11630642-11630755)
chr3 (300-344)||(13735193-13735237)
chr3 (294-330)||(29525942-29525978)
chr3 (297-341)||(32322064-32322108)
chr3 (279-327)||(32587739-32587787)
chr3 (295-339)||(39671055-39671099)
chr3 (302-334)||(39714001-39714033)
[»] chr7 (87 HSPs)
chr7 (225-344)||(38956506-38956625)
chr7 (225-343)||(44895460-44895578)
chr7 (224-344)||(43025404-43025524)
chr7 (224-344)||(40112841-40112961)
chr7 (224-344)||(41189428-41189550)
chr7 (223-344)||(3937009-3937128)
chr7 (225-342)||(22918057-22918174)
chr7 (224-344)||(24614203-24614323)
chr7 (224-338)||(35072249-35072363)
chr7 (223-327)||(25192803-25192907)
chr7 (225-344)||(46578023-46578142)
chr7 (224-338)||(35098590-35098704)
chr7 (225-344)||(41989628-41989749)
chr7 (223-344)||(43942701-43942817)
chr7 (223-344)||(48062121-48062242)
chr7 (225-344)||(40417838-40417957)
chr7 (219-310)||(46022149-46022240)
chr7 (250-344)||(44189223-44189317)
chr7 (221-341)||(32529740-32529858)
chr7 (224-344)||(31445382-31445502)
chr7 (219-310)||(7701642-7701733)
chr7 (225-337)||(45851095-45851204)
chr7 (226-338)||(47391214-47391326)
chr7 (225-344)||(43159463-43159581)
chr7 (264-344)||(38861160-38861240)
chr7 (224-344)||(41018728-41018848)
chr7 (254-344)||(22817003-22817093)
chr7 (264-329)||(38073299-38073364)
chr7 (297-344)||(27568082-27568129)
chr7 (223-344)||(33578202-33578321)
chr7 (279-344)||(4292492-4292557)
chr7 (279-344)||(36352526-36352591)
chr7 (303-344)||(45420026-45420067)
chr7 (224-344)||(46095015-46095137)
chr7 (284-344)||(3683596-3683656)
chr7 (254-337)||(17945139-17945222)
chr7 (297-344)||(18505838-18505885)
chr7 (297-344)||(34507165-34507212)
chr7 (229-344)||(35600736-35600851)
chr7 (297-344)||(35822934-35822981)
chr7 (108-175)||(41529576-41529643)
chr7 (293-344)||(49069314-49069365)
chr7 (254-336)||(10700103-10700184)
chr7 (258-344)||(38656600-38656686)
chr7 (307-344)||(18856534-18856571)
chr7 (255-344)||(33776424-33776513)
chr7 (254-343)||(36533793-36533882)
chr7 (284-344)||(38259128-38259186)
chr7 (303-344)||(40854620-40854661)
chr7 (279-344)||(41430093-41430158)
chr7 (228-329)||(42552977-42553078)
chr7 (294-334)||(15325596-15325636)
chr7 (300-344)||(24532905-24532949)
chr7 (228-327)||(35207582-35207679)
chr7 (224-287)||(3614333-3614396)
chr7 (297-344)||(9944179-9944226)
chr7 (279-334)||(12007127-12007182)
chr7 (292-344)||(30941450-30941506)
chr7 (256-327)||(36207117-36207188)
chr7 (225-260)||(38073356-38073391)
chr7 (273-344)||(38347608-38347679)
chr7 (123-178)||(42977927-42977982)
chr7 (303-338)||(46812871-46812906)
chr7 (303-344)||(13152657-13152699)
chr7 (294-344)||(22540982-22541032)
chr7 (304-338)||(32453564-32453598)
chr7 (300-334)||(37352185-37352219)
chr7 (279-344)||(38340323-38340389)
chr7 (297-338)||(2300154-2300195)
chr7 (279-344)||(11325965-11326030)
chr7 (297-338)||(31274500-31274541)
chr7 (303-344)||(34978361-34978402)
chr7 (279-344)||(36703813-36703878)
chr7 (279-344)||(42584867-42584932)
chr7 (254-338)||(46532572-46532656)
chr7 (303-339)||(3062399-3062435)
chr7 (297-337)||(4225823-4225863)
chr7 (229-305)||(13401555-13401631)
chr7 (294-338)||(16708230-16708274)
chr7 (294-338)||(17682466-17682510)
chr7 (279-331)||(22315364-22315416)
chr7 (271-327)||(22925218-22925274)
chr7 (298-330)||(32952411-32952443)
chr7 (302-334)||(33057454-33057486)
chr7 (284-344)||(40227113-40227173)
chr7 (299-343)||(43370489-43370533)
chr7 (298-334)||(47684236-47684272)
[»] chr6 (49 HSPs)
chr6 (225-344)||(552857-552976)
chr6 (224-344)||(32316815-32316935)
chr6 (230-344)||(18737460-18737574)
chr6 (223-344)||(15974672-15974793)
chr6 (225-344)||(5694039-5694158)
chr6 (223-344)||(26595413-26595534)
chr6 (223-344)||(34047451-34047572)
chr6 (225-344)||(13689882-13690001)
chr6 (225-340)||(14818000-14818115)
chr6 (225-344)||(22079451-22079570)
chr6 (225-343)||(31077858-31077977)
chr6 (224-344)||(1156784-1156904)
chr6 (223-315)||(33430248-33430340)
chr6 (219-338)||(16199526-16199639)
chr6 (236-343)||(3853206-3853313)
chr6 (225-343)||(277056-277174)
chr6 (220-344)||(17551262-17551385)
chr6 (226-344)||(11612252-11612370)
chr6 (224-338)||(30457575-30457689)
chr6 (220-327)||(4820448-4820555)
chr6 (271-344)||(5080501-5080574)
chr6 (228-344)||(6271414-6271527)
chr6 (223-344)||(24900838-24900959)
chr6 (264-340)||(8098524-8098600)
chr6 (254-336)||(31883220-31883302)
chr6 (225-321)||(33603168-33603264)
chr6 (279-337)||(20998087-20998145)
chr6 (231-344)||(30956136-30956249)
chr6 (289-337)||(11072242-11072290)
chr6 (303-340)||(8990976-8991013)
chr6 (303-340)||(9015423-9015460)
chr6 (303-344)||(25811804-25811845)
chr6 (228-321)||(30423443-30423536)
chr6 (108-172)||(3534212-3534276)
chr6 (258-325)||(2241946-2242013)
chr6 (281-344)||(3772420-3772483)
chr6 (297-344)||(16368006-16368053)
chr6 (279-338)||(32295294-32295353)
chr6 (297-336)||(33195279-33195318)
chr6 (108-166)||(11324662-11324720)
chr6 (300-338)||(17496054-17496092)
chr6 (294-344)||(31749429-31749479)
chr6 (279-344)||(10335615-10335680)
chr6 (229-338)||(10826573-10826682)
chr6 (304-344)||(8505740-8505780)
chr6 (308-344)||(8645373-8645409)
chr6 (297-325)||(10375738-10375766)
chr6 (298-338)||(20578016-20578056)
chr6 (296-344)||(25142509-25142557)
[»] chr4 (97 HSPs)
chr4 (218-344)||(23369213-23369339)
chr4 (223-344)||(26732289-26732410)
chr4 (222-344)||(37297113-37297234)
chr4 (223-344)||(11068752-11068873)
chr4 (223-344)||(51986106-51986227)
chr4 (224-344)||(27050973-27051093)
chr4 (225-344)||(53801647-53801764)
chr4 (223-344)||(29175291-29175410)
chr4 (228-340)||(24575742-24575854)
chr4 (225-337)||(39440555-39440667)
chr4 (225-344)||(43175048-43175167)
chr4 (223-344)||(10250401-10250522)
chr4 (223-344)||(37997318-37997439)
chr4 (221-344)||(44539800-44539921)
chr4 (224-343)||(26724859-26724975)
chr4 (225-344)||(15175610-15175729)
chr4 (218-344)||(27965051-27965175)
chr4 (217-344)||(31641445-31641572)
chr4 (233-344)||(38134417-38134528)
chr4 (225-344)||(46213034-46213153)
chr4 (222-344)||(2268404-2268514)
chr4 (225-338)||(38376378-38376491)
chr4 (222-344)||(39478499-39478623)
chr4 (224-344)||(5622522-5622642)
chr4 (224-344)||(36177970-36178090)
chr4 (222-344)||(42853641-42853763)
chr4 (223-344)||(40348858-40348974)
chr4 (223-327)||(26492088-26492192)
chr4 (219-338)||(34616637-34616750)
chr4 (219-338)||(38382397-38382510)
chr4 (219-310)||(47181939-47182030)
chr4 (219-310)||(48402079-48402170)
chr4 (223-327)||(2575676-2575780)
chr4 (264-344)||(50608551-50608631)
chr4 (224-336)||(50831642-50831754)
chr4 (225-344)||(7632349-7632468)
chr4 (225-344)||(46634164-46634271)
chr4 (219-309)||(56363927-56364017)
chr4 (226-328)||(56474656-56474758)
chr4 (223-344)||(19473842-19473963)
chr4 (220-344)||(19232017-19232140)
chr4 (264-344)||(29531533-29531613)
chr4 (224-344)||(50721631-50721751)
chr4 (279-344)||(12387607-12387672)
chr4 (223-344)||(39195121-39195242)
chr4 (221-329)||(39654903-39655011)
chr4 (223-337)||(12595516-12595630)
chr4 (254-344)||(53796720-53796810)
chr4 (279-344)||(25123213-25123278)
chr4 (225-344)||(39606031-39606155)
chr4 (256-343)||(10474031-10474118)
chr4 (223-344)||(1627441-1627565)
chr4 (299-344)||(16019541-16019586)
chr4 (297-344)||(5249933-5249980)
chr4 (289-344)||(26910266-26910321)
chr4 (228-344)||(31995804-31995922)
chr4 (255-338)||(35874820-35874903)
chr4 (225-264)||(53786103-53786142)
chr4 (233-338)||(3316421-3316529)
chr4 (222-344)||(24509272-24509394)
chr4 (279-344)||(52895292-52895358)
chr4 (222-338)||(11672008-11672122)
chr4 (279-344)||(31574881-31574946)
chr4 (303-344)||(51577679-51577720)
chr4 (300-344)||(1816638-1816682)
chr4 (281-337)||(5386444-5386500)
chr4 (244-344)||(27354261-27354361)
chr4 (253-344)||(21025666-21025757)
chr4 (297-344)||(31559603-31559650)
chr4 (297-344)||(44257689-44257736)
chr4 (231-294)||(45083086-45083149)
chr4 (297-344)||(50890033-50890080)
chr4 (279-334)||(51255821-51255876)
chr4 (224-338)||(336694-336808)
chr4 (254-336)||(21775259-21775341)
chr4 (226-344)||(25221613-25221731)
chr4 (223-337)||(27371212-27371326)
chr4 (222-344)||(29891909-29892031)
chr4 (254-344)||(38380993-38381083)
chr4 (300-334)||(52204925-52204959)
chr4 (299-332)||(8810648-8810681)
chr4 (297-338)||(9393836-9393877)
chr4 (297-338)||(14113573-14113614)
chr4 (300-337)||(18316009-18316046)
chr4 (297-338)||(28458337-28458378)
chr4 (303-344)||(34757874-34757915)
chr4 (303-344)||(34759148-34759189)
chr4 (279-344)||(35897765-35897830)
chr4 (303-344)||(36123425-36123466)
chr4 (225-322)||(42491160-42491257)
chr4 (297-338)||(48796492-48796533)
chr4 (297-338)||(49896626-49896667)
chr4 (300-344)||(5932726-5932770)
chr4 (224-344)||(19174661-19174781)
chr4 (297-344)||(24045309-24045354)
chr4 (303-339)||(38338888-38338924)
chr4 (279-331)||(42395979-42396031)
[»] scaffold0056 (1 HSPs)
scaffold0056 (223-344)||(76505-76626)
[»] chr8 (64 HSPs)
chr8 (223-344)||(12898815-12898936)
chr8 (220-341)||(27325825-27325946)
chr8 (224-344)||(11253429-11253549)
chr8 (225-344)||(4054174-4054293)
chr8 (223-344)||(37133748-37133869)
chr8 (228-344)||(32501087-32501203)
chr8 (224-344)||(34186671-34186791)
chr8 (225-344)||(22719504-22719623)
chr8 (221-344)||(36660334-36660457)
chr8 (224-338)||(29025330-29025444)
chr8 (223-344)||(37449311-37449432)
chr8 (228-344)||(36816507-36816623)
chr8 (231-344)||(5277393-5277506)
chr8 (223-344)||(43397845-43397966)
chr8 (225-329)||(7271929-7272033)
chr8 (225-344)||(42768270-42768387)
chr8 (231-340)||(36251395-36251503)
chr8 (264-344)||(10731610-10731690)
chr8 (223-343)||(13106545-13106665)
chr8 (224-308)||(24479323-24479407)
chr8 (222-344)||(31249421-31249531)
chr8 (220-344)||(10839365-10839489)
chr8 (225-344)||(5740673-5740792)
chr8 (224-344)||(10692503-10692615)
chr8 (225-344)||(23754594-23754713)
chr8 (223-344)||(10902769-10902884)
chr8 (279-344)||(45405596-45405661)
chr8 (225-344)||(7598773-7598891)
chr8 (294-338)||(6445247-6445291)
chr8 (284-344)||(24798304-24798364)
chr8 (274-344)||(27854705-27854773)
chr8 (223-344)||(21526165-21526287)
chr8 (279-344)||(34873901-34873966)
chr8 (297-338)||(39211112-39211153)
chr8 (294-331)||(39856115-39856152)
chr8 (296-344)||(2621850-2621898)
chr8 (300-344)||(10592243-10592287)
chr8 (300-344)||(11134661-11134705)
chr8 (296-344)||(37942865-37942913)
chr8 (302-334)||(45405948-45405980)
chr8 (274-329)||(2883267-2883322)
chr8 (297-344)||(5574320-5574367)
chr8 (297-344)||(6440146-6440193)
chr8 (281-344)||(44061782-44061845)
chr8 (294-344)||(2730917-2730967)
chr8 (300-338)||(22811479-22811517)
chr8 (300-334)||(44090961-44090995)
chr8 (297-338)||(12284229-12284270)
chr8 (226-344)||(32133392-32133505)
chr8 (303-344)||(33279514-33279555)
chr8 (303-344)||(35067225-35067266)
chr8 (279-344)||(37754626-37754691)
chr8 (297-338)||(38585472-38585513)
chr8 (279-344)||(38958493-38958558)
chr8 (279-344)||(40517322-40517387)
chr8 (297-337)||(4312620-4312660)
chr8 (109-168)||(8547337-8547397)
chr8 (296-344)||(8671514-8671562)
chr8 (299-335)||(11584170-11584206)
chr8 (300-344)||(25987749-25987793)
chr8 (303-339)||(31597017-31597053)
chr8 (224-336)||(34639605-34639717)
chr8 (299-344)||(41639759-41639806)
chr8 (299-331)||(44064435-44064467)
[»] scaffold0098 (1 HSPs)
scaffold0098 (225-344)||(49359-49478)
[»] scaffold0199 (1 HSPs)
scaffold0199 (223-344)||(8732-8853)
[»] scaffold0519 (1 HSPs)
scaffold0519 (224-340)||(11850-11966)
[»] scaffold0087 (2 HSPs)
scaffold0087 (225-344)||(53249-53368)
scaffold0087 (289-344)||(24490-24545)
[»] scaffold0041 (1 HSPs)
scaffold0041 (264-344)||(10890-10970)
[»] scaffold0067 (1 HSPs)
scaffold0067 (264-344)||(35585-35667)
[»] scaffold0184 (1 HSPs)
scaffold0184 (224-344)||(16676-16794)
[»] scaffold0078 (1 HSPs)
scaffold0078 (224-344)||(56050-56168)
[»] scaffold0416 (1 HSPs)
scaffold0416 (253-338)||(6928-7013)
[»] scaffold0148 (1 HSPs)
scaffold0148 (223-344)||(20787-20908)
[»] scaffold0006 (1 HSPs)
scaffold0006 (222-343)||(72940-73061)
[»] scaffold0343 (1 HSPs)
scaffold0343 (297-337)||(8911-8951)
[»] scaffold0432 (1 HSPs)
scaffold0432 (275-334)||(6457-6516)
[»] scaffold0276 (1 HSPs)
scaffold0276 (281-344)||(1709-1772)
[»] scaffold0618 (1 HSPs)
scaffold0618 (300-334)||(8915-8949)


Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 86)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 37737637 - 37737963
Alignment:
Q  1 cattcatcaataaaaatataaaggcgagataaagatacaattatcttcgataaaacgtgactaaccccattaatttatgagtctcnnnnnnnnnnnnnnn 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||                   
T  37737637 cattcatcaataaaaatataaaggcgagataaagatacaattatcttcgataaaacgtgactaaccccattgatttatgagtctctttttttcttttttc 37737736  T
Q  101 nnnnnnnaagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaagacactgcaagatccgggcaatattta 200  Q
           |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37737737 ttttt--aagaagttaaaatagaatatattaccaaaacaatgtgactttcctagcacaagatgtactaagaaagacactgcaagatccgagcaatattta 37737834  T
Q  201 caaggaaactatacaaaaatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatatt 300  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37737835 caaggaaactatacaaaaatttgagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacaaccaaaactttacaaaggaaatgagatatt 37737934  T
Q  301 gacacaaaaatcaaaacaatagagagaga 329  Q
    ||||||||||||||| |||||||||||||    
T  37737935 gacacaaaaatcaaagcaatagagagaga 37737963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 18254095 - 18254216
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||||||| |||| ||||||    
T  18254095 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagcaatag 18254194  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  18254195 agagagaaagtaaaaagataat 18254216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 41195768 - 41195648
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  41195768 agagttgtgttatttgaacattcatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaaccaaagcaataga 41195669  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||||||||||||||| ||||    
T  41195668 gagagaaagtaaaaaggtaat 41195648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 2076757 - 2076635
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||||| |||    
T  2076757 tttaagagttgtgttatttgaacatcaatagatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaa 2076658  T
Q  320 tagagagagaaagtaaaaagata 342  Q
    |||| ||||||||||||||||||    
T  2076657 tagaaagagaaagtaaaaagata 2076635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 32477517 - 32477396
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||| || |||||||||||||| |||| | |||||||||||| |||||     
T  32477517 aagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttgacaaaggaaatgaggtattcatacaaaaatcaaagcaatat 32477418  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  32477417 agagagaaagtaaaaagataat 32477396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 41042439 - 41042318
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||| |||||||||||| |||||||||||||||| |||| |||| ||||||| |||| ||||||||||||||||||||| ||||| |||| ||||||    
T  41042439 aagagttctgttatttgaacatccatatatgtgacaatttttatgacaaccaaaattttataaaggaaatgagatattgacataaaaaccaaagcaatag 41042340  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  41042339 agagagaaagtaaaaagataat 41042318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 43487567 - 43487443
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| || ||||||| ||||||||||||||||| || ||||||||||| |||| |||    
T  43487567 tttaagagttgtgttatttgaacatccatatatgtgacaatttttgtaacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaa 43487468  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    |||||| |||||||||||| |||||    
T  43487467 tagagaaagaaagtaaaaaaataat 43487443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 9194426 - 9194305
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| | ||||||||| |||| ||||||||| ||||||| |||||||| |||||||| || || |||||||| |||||||||||    
T  9194426 aagagttgtgttatttgaacattcatatatgtaacaatttttgtgacaaccaaaattttacaaaagaaatgaggtaatggcacaaaaaccaaaacaatag 9194327  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  9194326 agagagaaagtaaaaagataat 9194305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 9647317 - 9647196
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| | |||||||| || |||||||||||| ||||||| ||||||||||||||||  || ||||||||||| |||| ||||||    
T  9647317 aagagttgtgttatttgaacattcatatatgcgataacttttgtgacaaccaaaattttacaaaggaaatgaagtagtgacacaaaaaccaaagcaatag 9647218  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  9647217 agagagaaagtaaaaagataat 9647196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 3838768 - 3838887
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| || ||||||||||||||||||||||  |  |||| ||||||||||||||||   | |||||||||||||||||||||||||    
T  3838768 gagttgtgttatttgaacatctatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaagcagtgacacaaaaatcaaaacaatagag 3838867  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  3838868 agagaaagtaaaaagataat 3838887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 1248872 - 1248750
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |  |||| ||||||||||||||||| || || |||||||| |||| |||||    
T  1248872 taagagttgtgttatttgaacatccatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 1248773  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||||| ||||||||||||||||    
T  1248772 gagagataaagtaaaaagataat 1248750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 9207772 - 9207654
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| || |||||||||| || ||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| |||||||||    
T  9207772 agttgtgttatttgaacatctatatatgtgataatttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagaga 9207673  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  9207672 gagaaagtaaaaaaataat 9207654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 223 - 329
Target Start/End: Original strand, 22888703 - 22888809
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||| |||||||| |||| |||||     
T  22888703 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaataa 22888802  T
Q  323 agagaga 329  Q
    |||||||    
T  22888803 agagaga 22888809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 9760203 - 9760082
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| ||||||| ||| | ||||||||||| || || |||||||   ||| ||||||    
T  9760203 aagagttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaatttttccaaggaaatgaggtagtggcacaaaatctaaagcaatag 9760104  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  9760103 agagagaaagtaaaaagataat 9760082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 9990876 - 9990755
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| |  |||| ||||||||||||||||  || ||  ||||||| |||| ||||||    
T  9990876 aagagttgtgttatttgaacatccatatatgtgataacttttgtgacaattaaaattttacaaaggaaatgaagtagtggtacaaaaaccaaagcaatag 9990777  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  9990776 agagagaaagtaaaaagataat 9990755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 42421784 - 42421901
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||| |||| |||||||||||| || || |||||| | |||| |||||     
T  42421784 aagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaacaccaaagcaataa 42421883  T
Q  323 agagagaaagtaaaaaga 340  Q
    ||||||||||||||||||    
T  42421884 agagagaaagtaaaaaga 42421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 226 - 341
Target Start/End: Original strand, 34944979 - 34945094
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||| |||||  | |||||||||||||||||| ||||| ||||||| |||||||| |||||||| || || ||||||||||||| |||||||||    
T  34944979 agttgtgttaattgaatattcatatatgtgacaactttcgtgacaaccaaaattttacaaaagaaatgaggtagtggcacaaaaatcaaagcaatagaga 34945078  T
Q  326 gagaaagtaaaaagat 341  Q
    ||||||||||||||||    
T  34945079 gagaaagtaaaaagat 34945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 6049236 - 6049343
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||| |||||||| |||| ||  |||||||    
T  6049236 ttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagca--agagaga 6049333  T
Q  328 gaaagtaaaa 337  Q
    ||||||||||    
T  6049334 gaaagtaaaa 6049343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 215 - 344
Target Start/End: Original strand, 21611533 - 21611665
Alignment:
Q  215 aaaaatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaa-----tgagatattgacacaaaa 309  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||     |||| || || |||||||    
T  21611533 aaaaattaaagagttgtgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttacaaatgaaataaggtgaggtagtggcacaaaa 21611632  T
Q  310 atcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| ||||  ||||||||||||||||||||||    
T  21611633 atcaaagcaat--agagagaaagtaaaaagataat 21611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 27490617 - 27490737
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| ||||| |   |||||||||||||||| | ||||| ||||||||| ||||||  |||| |||||||||||||| |||||||    
T  27490617 agagttgtgttatttgaacatccattttgatgacaacttttgtgacaatcaaaattttacaaagaaaatgatgtattaacacaaaaatcaaagcaataga 27490716  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||||||| |||||| |||||    
T  27490717 gagagaaattaaaaacataat 27490737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 42091393 - 42091511
Alignment:
Q  228 ttgtgttatttgaacgtccatat--atgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||| || ||||  ||||||||| ||||||||| ||||||| ||||||||||||| ||| || ||||||||||| |||| |||||||||    
T  42091393 ttgtgttatttgaacatctatatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaaccaaagcaatagaga 42091492  T
Q  326 gagaaagtaaaaagataat 344  Q
    |  |||||||| |||||||    
T  42091493 ggaaaagtaaagagataat 42091511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 1907650 - 1907770
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||||||||||||||   ||| ||  ||||||||| | |||| |||| || ||||||||| ||| | |  ||||||||||||||||||||||||||    
T  1907650 agagttgtgttatttgaacaatcatttagatgacaacttgtatgacaaccataaatttacaaagaaaaagcggaattgacacaaaaatcaaaacaataga 1907749  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||    
T  1907750 gagagaaagtaaaaacataat 1907770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 3097743 - 3097856
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| |||| |||||      ||||||    
T  3097743 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagttatttacaca------aaaaca 3097836  T
Q  319 atagagagagaaagtaaaaa 338  Q
    ||||||||||||| ||||||    
T  3097837 atagagagagaaaataaaaa 3097856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 224 - 343
Target Start/End: Original strand, 7663954 - 7664072
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||||||||||||||   ||| || ||||||| |||| |||| |||| || ||||||||| ||| ||| |||||||||||||| |||| |||||||    
T  7663954 agagttgtgttatttgaacaatcatttaggtgacaa-ttttatgacaaccataaatttacaaagaaaaagaggtattgacacaaaaaccaaagcaataga 7664052  T
Q  324 gagagaaagtaaaaagataa 343  Q
    ||||||||||||||| ||||    
T  7664053 gagagaaagtaaaaatataa 7664072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 7698354 - 7698235
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||| |||| || ||| |||||| |||||||||||  |  |||| |||||||||||||| || || || ||||||||||||| |||||||     
T  7698354 gagttgtgttattagaacatctatacatgtgataacttttgtgataattaaaattttacaaaggaaattaggtagtggcacaaaaatcaaagcaatagaa 7698255  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  7698254 agagaaagtaaaaaaataat 7698235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 19108993 - 19109100
Alignment:
Q  237 ttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    |||||| | |||||||||||||||||||||||| || ||   ||| ||||||||||||  || || ||||||||||||| ||||||||||||||| ||||    
T  19108993 ttgaacattcatatatgtgacaacttttgtgacaacaaattttttgcaaaggaaatgaagtagtggcacaaaaatcaaagcaatagagagagaaaataaa 19109092  T
Q  337 aagataat 344  Q
    ||||||||    
T  19109093 aagataat 19109100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 25270464 - 25270555
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaa 310  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||| | ||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  25270464 atttaagagttgtgttatttgaacatccatttatatgacaactttcgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 25270555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 41056629 - 41056720
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaa 310  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  41056629 atttaatagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 41056720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 13333052 - 13333165
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||| || || ||| |||||||||||| ||| ||||||| |||| |||| ||||||  ||||||||||      ||||||    
T  13333052 atttaagagttgtgttatttgaacatcgatttatatgacaacttttgagacaaccaaaattttataaagaaaatgatgtattgacaca------aaaaca 13333145  T
Q  319 atagagagagaaagtaaaaa 338  Q
    ||||||||||||| ||||||    
T  13333146 atagagagagaaaataaaaa 13333165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 19633466 - 19633346
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgt-gacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||| |||||||||| |  |||||||| || |||||||||||| | ||||| ||||||||||||||||| || ||| ||||||| |||| ||| |||    
T  19633466 gagttgtattatttgaacatttatatatgttgataacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaaccaaagcaacaga 19633367  T
Q  324 gagagaaagtaaaaagataat 344  Q
    || |||||||||| |||||||    
T  19633366 gaaagaaagtaaacagataat 19633346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 19830367 - 19830247
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgt-gacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||| |||||||||| |  |||||||| || |||||||||||| | ||||| ||||||||||||||||| || ||| ||||||| |||| ||| |||    
T  19830367 gagttgtattatttgaacatttatatatgttgataacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaaccaaagcaacaga 19830268  T
Q  324 gagagaaagtaaaaagataat 344  Q
    || |||||||||| |||||||    
T  19830267 gaaagaaagtaaacagataat 19830247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 39147954 - 39147830
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    |||| ||| ||||||||||||||  |||| |   |||||||||||| ||| | || || ||||||||  ||||||| |||||||||||||||||||||||    
T  39147954 tttatgagatgtgttatttgaacaaccattttaatgacaacttttgggacaatcataaatttacaaaaaaaatgaggtattgacacaaaaatcaaaacaa 39147855  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    || | |||||||||||||| |||||    
T  39147854 tacaaagagaaagtaaaaacataat 39147830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 344
Target Start/End: Complemental strand, 19642777 - 19642662
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    |||||||||| ||| ||||| ||| ||| |||||||| ||| |||| || ||| ||||| ||||||   |||||||||||||||||| ||||||||||||    
T  19642777 tgtgttatttaaacatccatttatatgagaacttttgagacaaccacaattttgcaaagaaaatgaagcattgacacaaaaatcaaagcaatagagagag 19642678  T
Q  329 aaagtaaaaagataat 344  Q
    ||||| |||| |||||    
T  19642677 aaagtgaaaacataat 19642662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 22416386 - 22416277
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||            ||||||| ||||||||| |||||||  | || |||||||| |||| ||||||    
T  22416386 aagagttgtgttatttgaacatccatatatgtgaca------------accaaaattttacaaagaaaatgaggcagtggcacaaaaaccaaagcaatag 22416299  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  22416298 agagagaaagtaaaaagataat 22416277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 23690450 - 23690509
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||||||    
T  23690450 tttacaaaggaaaagaggtattgacacaaaaaccaaaacaatagagtgagaaagtaaaaa 23690509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 344
Target Start/End: Complemental strand, 28495051 - 28494924
Alignment:
Q  217 aaatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaa 316  Q
    |||||||  |||||||||||||||||  |||| ||  | |||||||||||||| |||| || |||||| || |||| || |||||||||||||| |||||    
T  28495051 aaatttattagttgtgttatttgaacaaccatttaaattacaacttttgtgacaaccataaatttacacagaaaattaggtattgacacaaaaaccaaaa 28494952  T
Q  317 caatagagagagaaagtaaaaagataat 344  Q
     |||  ||||||||| |||||| |||||    
T  28494951 taatttagagagaaaataaaaacataat 28494924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 44977387 - 44977506
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||||||||  |||| |    || ||||| || ||| |||| || ||||||||| ||||| | |||||||||||||| |||| ||||||||    
T  44977387 gagttgtgttatttgaacaaccatttgaacgaaaacttatgagacaaccataaatttacaaagaaaatggggtattgacacaaaaaccaaagcaatagag 44977486  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  44977487 agagaaagtaaaaacataat 44977506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 344
Target Start/End: Complemental strand, 42430828 - 42430714
Alignment:
Q  230 gtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagaga 329  Q
    |||||||||||||  |||| | ||||||||||||||  || |||| || ||||||||| |||  || |||||||||  ||| |||||||||||||||||     
T  42430828 gtgttatttgaacaaccatttgtgtgacaacttttggaacaaccataagtttacaaagaaaagtaggtattgacacggaaaccaaaacaatagagagagg 42430729  T
Q  330 aagtaaaaagataat 344  Q
    ||||||||| |||||    
T  42430728 aagtaaaaacataat 42430714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 31296723 - 31296602
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||| ||||||||||||||  ||||   ||||||||||||| |||| |||| || ||||||||| |||  ||||||| |||   ||| |||||||||||    
T  31296723 aagagatgtgttatttgaacaaccattagtgtgacaacttttatgacaaccataaatttacaaagaaaaatagatattaacatggaaaccaaaacaatag 31296624  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||| |||||||||||| |||||    
T  31296623 agacagaaagtaaaaatataat 31296602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 6511395 - 6511315
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| | ||||| |||| |||||||||||| || ||||||||||| |||| ||||||| ||||||| ||||||||||||    
T  6511395 tgtgacaatcaaaattttataaaggaaatgaggtagtgacacaaaaaccaaagcaatagaaagagaaaataaaaagataat 6511315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 337
Target Start/End: Complemental strand, 14255482 - 14255374
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    ||||||||||||||  |||| |||| ||||||||||| ||| |||| || ||||||||| |||  || |||| ||||| ||| |||  ||||||||||||    
T  14255482 tgtgttatttgaacaaccatttatgcgacaacttttgggacaaccataaatttacaaagaaaagtaggtattaacacataaaccaatgcaatagagagag 14255383  T
Q  329 aaagtaaaa 337  Q
    |||||||||    
T  14255382 aaagtaaaa 14255374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 44287369 - 44287441
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    |||||| ||||||| ||||||||||||||||| |  || ||||| || |||||||||||||||||||||||||    
T  44287369 tgtgacaaccaaaattttacaaaggaaatgaggttgtggcacaataaccaaaacaatagagagagaaagtaaa 44287441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 343
Target Start/End: Complemental strand, 18846795 - 18846676
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||| |||||||||||| ||||| ||  |||||| |||| |||| | ||||| ||| ||||  ||||||  |||||  ||||||||||||  ||||||    
T  18846795 agagttatgttatttgaacatccatttagatgacaatttttatgacaatcaaaattttgcaaaaaaaatgatgtattggtacaaaaatcaaagtaataga 18846696  T
Q  324 gagagaaagtaaaaagataa 343  Q
    ||||||||||||||| ||||    
T  18846695 gagagaaagtaaaaacataa 18846676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 1352574 - 1352453
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||  | ||| | ||||| ||||  || || |||| ||||||||| |||||||  |||| |||||||| |||| ||||||    
T  1352574 aagagttgtgttatttgaacatcattttatataacaacctttgcaacaactaaaattttacaaagaaaatgagtgattggcacaaaaaccaaagcaatag 1352475  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||| | |||||||||| |||||    
T  1352474 agaaataaagtaaaaatataat 1352453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 338
Target Start/End: Original strand, 8848582 - 8848696
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| || || ||  ||| || ||||||||| | ||||| ||| ||||| ||||||  |||||  |||||||||||| |||||    
T  8848582 taagagttgtgttatttgaacatctatttagatgataatttttgtgacaatcaaaattttgcaaagaaaatgatgtattggtacaaaaatcaaagcaata 8848681  T
Q  322 gagagagaaagtaaaaa 338  Q
    |||  ||||||||||||    
T  8848682 gag--agaaagtaaaaa 8848696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 8427704 - 8427624
Alignment:
Q  257 caacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||  || |||| || |||| ||||||||| || ||||||||| |||| ||||| ||||||||||||||||||||    
T  8427704 caacttttggaacaaccataaatttataaaggaaattagttattgacacgaaaaccaaaataatagagagagaaagtaaaa 8427624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 7504007 - 7503964
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||    
T  7504007 agatattaacacaaaaatcaaaacaatagagagggaaagtaaaa 7503964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 328
Target Start/End: Complemental strand, 44654807 - 44654704
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||     || ||| ||| |||||||  ||| || |||| |||| |||| |||||||| || ||||||||||||||||||||||||    
T  44654807 gagttgtgttatttgaaaaataatttatatgataacttttaagacaactaaaattttataaagaaaatgagaaatcgacacaaaaatcaaaacaatagag 44654708  T
Q  325 agag 328  Q
    ||||    
T  44654707 agag 44654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 344
Target Start/End: Complemental strand, 16011566 - 16011496
Alignment:
Q  274 aaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||||  ||| |||||| |||||||| |||||||||||||||| |||||||| |||| |||||    
T  16011566 aaaattttacaaaaaaaaagagatagtgacacaagaatcaaaacaatagagtgagaaagtgaaaacataat 16011496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 17569658 - 17569704
Alignment:
Q  289 aaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaa 335  Q
    ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  17569658 aaatgaggtattgacacaaaaagcaaaacaataaagagagaaagtaa 17569704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 29349688 - 29349570
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||| |||||||| ||| ||||| ||  |||||||||||||||| | ||||| ||||||||| |||| |  ||| | |||||||||||||  || |||||    
T  29349688 agttatgttatttcaacatccatttagatgacaacttttgtgacaatcaaaattttacaaagaaaataatgtatcggcacaaaaatcaaagtaacagaga 29349589  T
Q  326 gagaaagtaaaaagataat 344  Q
    || || ||||||| |||||    
T  29349588 gaaaaggtaaaaacataat 29349570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 33583164 - 33583227
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||  |||||||||||||||| |||||    
T  33583164 tttacaaagaaaatgaggtattgacaaaaaaaacaaaacaat--agagagaaagtaaaaacataat 33583227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 12070977 - 12070912
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| |  ||||||||| ||||||||| ||||||| |||||||||||||| |||||    
T  12070977 tttacaaagaaaatcatgtattgacacgaaaatcaaagcaatagaaagagaaagtaaaaatataat 12070912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 16973647 - 16973768
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||| |||||||| ||| || || |||  ||||||| |||  || ||||||| ||||||||  |||||||| |||||| |||||||||||  |||||    
T  16973647 aagagttttgttatttaaacatctatttattggacaactattgatacaaccaaaattttacaaataaaatgagaaattgacccaaaaatcaaagtaatag 16973746  T
Q  323 agagagaaagtaaaaagataat 344  Q
      ||||||| |||||| |||||    
T  16973747 taagagaaaataaaaatataat 16973768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 22445967 - 22446012
Alignment:
Q  280 ttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||    
T  22445967 ttacaaaggaaatgaggtattgacacaaaaattaaagcaatagaga 22446012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 44050200 - 44050080
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||| ||||||||||||||  |||| | || ||||||||||| ||| |||| || ||||||||| |||| |  |||||||||  ||| |||| |||||     
T  44050200 aagaggtgtgttatttgaacaaccatttgtgcgacaacttttgagacaaccataaatttacaaagaaaat-atgtattgacacggaaaccaaagcaataa 44050102  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||| |||||||||||| |||||    
T  44050101 agaaagaaagtaaaaacataat 44050080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 13711253 - 13711373
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||| ||||||| ||||||  |||| |  ||||||| ||||||||| | ||  | |||||||||||||  ||||| ||||||  ||| ||||  ||||||    
T  13711253 agaggtgtgttaattgaacaaccatttgagtgacaatttttgtgacaatcactaatttacaaaggaaagtagatagtgacacggaaaccaaagtaataga 13711352  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||    
T  13711353 gagagaaagtaaaaaaataat 13711373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 5427178 - 5427229
Alignment:
Q  293 gagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| ||||| ||| |||||||||||| |||||||||| |||||    
T  5427178 gagatattgacaaaaaaaccaacacaatagagagaaaaagtaaaaacataat 5427229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 336
Target Start/End: Original strand, 7258449 - 7258560
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||||||||  |||| |   | |||| ||||| ||| || | || |||| |||| ||| ||| | |||||| |||||||||| ||||||||    
T  7258449 gagttgtgttatttgaacaaccatttgattaacaatttttgggacaactataattttataaagaaaaagaggtcttgacataaaaatcaaagcaatagag 7258548  T
Q  325 agagaaagtaaa 336  Q
    ||||||||||||    
T  7258549 agagaaagtaaa 7258560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 10216979 - 10216920
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| |||  || |||||||||||||| | || ||||||||||||||||||||||    
T  10216979 tttacaaagaaaaaaaggtattgacacaaaaaccgaagcaatagagagagaaagtaaaaa 10216920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 14328493 - 14328446
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  14328493 tattgacacgaaaatcaaagcaacagagagagaaagtaaaaatataat 14328446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 10833533 - 10833652
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||| ||||||||||||||  |||  |  ||||||||||||||||| ||||  | |||||||||||||  ||||| | ||||  ||| |||| ||||      
T  10833533 aagagatgtgttatttgaacaaccaattgagtgacaacttttgtgacaaccactaatttacaaaggaaagtagatagttacacggaaaccaaagcaat-- 10833630  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  10833631 agagagaaagtaaaaaaataat 10833652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 13766278 - 13766316
Alignment:
Q  306 aaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  13766278 aaaaaacaaaacaatagagagagaaagtaaaaacataat 13766316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 329
Target Start/End: Complemental strand, 14876826 - 14876796
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagaga 329  Q
    |||||||||||||||||||||||||||||||    
T  14876826 ttgacacaaaaatcaaaacaatagagagaga 14876796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 31415060 - 31414974
Alignment:
Q  258 aacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||| ||| |||| || |||| |||| ||  |||||||||||||||||| |||  ||| |||||||| ||||||||| |||||    
T  31415060 aacttttgagacaaccataattttaaaaagaaagagagatattgacacaaaaaccaatgcaacagagagagtaagtaaaaacataat 31414974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 31640492 - 31640434
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtac 166  Q
    |||||| |||||| ||||||||||||||| ||| ||| |||| |||| |||||||||||    
T  31640492 aagaagttaaaatggaatatattaccaaatcaaagtgtctttcctagtacaagatgtac 31640434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 3412446 - 3412547
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacac-aaaaatcaaaacaatagagaga 327  Q
    |||||| |||||||  | || ||||||||||||||||  || |||| || ||||||||| |||  |||||||| ||| |||||||||| ||||||| |||    
T  3412446 tgtgttgtttgaacaactatttatgtgacaacttttgaaacaaccataaatttacaaagaaaagtagatattgccacaaaaaatcaaagcaatagaaaga 3412545  T
Q  328 ga 329  Q
    ||    
T  3412546 ga 3412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 5361903 - 5361858
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| |||||||||||| | |||||||||||| |||||    
T  5361903 ttgacacaaaaaccaaaacaatagaaaaagaaagtaaaaatataat 5361858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Complemental strand, 14871748 - 14871715
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaag 332  Q
    ||||||||||||||||| ||||||||||||||||    
T  14871748 ttgacacaaaaatcaaagcaatagagagagaaag 14871715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 18737839 - 18737880
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||| ||| |||||||||||| |||||    
T  18737839 cacaaaaatcaaaacaataaagaaagaaagtaaaaatataat 18737880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 19843590 - 19843549
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||||||||||||| ||||| |||||    
T  19843590 cacaaaaatcaaagcaatagagagagaaaggaaaaatataat 19843549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 29449317 - 29449276
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||  ||||||||||||||||||||| |||||    
T  29449317 cacaaaaatcaaagtaatagagagagaaagtaaaaatataat 29449276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 31578543 - 31578506
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  31578543 tgacacaaaaatcaaagcaatagagagataaagtaaaa 31578506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 32944466 - 32944503
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  32944466 tgacacaaaaatcaaagcaatagagagaaaaagtaaaa 32944503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 34119612 - 34119653
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||| |||| ||||||||||||||||||||| ||||||||||    
T  34119612 tattcacacgaaaatcaaaacaatagagagataaagtaaaaa 34119653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 36774640 - 36774603
Alignment:
Q  307 aaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  36774640 aaaatcaaagcaatagagagagaaagtaaaaatataat 36774603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 42821500 - 42821444
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    ||||||||| ||||||  |||||||||||||||| || ||||| ||||||||||||||    
T  42821500 tttacaaagaaaatgatgtattgacacaaaaatc-aagcaataaagagagaaagtaaa 42821444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 7084681 - 7084721
Alignment:
Q  304 acaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| ||||||| |||||||||||||| |||||    
T  7084681 acaaaaatcaaagcaatagaaagagaaagtaaaaatataat 7084721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 10521308 - 10521364
Alignment:
Q  288 gaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| |||| ||||||||||||||| |||||||  ||||| ||||||| |||||    
T  10521308 gaaatgatatatagacacaaaaatcaaagcaatagatggagaaggtaaaaacataat 10521364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 11965908 - 11965868
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    ||||| || ||||||||||||| ||||||||||||||||||    
T  11965908 agatagtggcacaaaaatcaaagcaatagagagagaaagta 11965868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 17395036 - 17395076
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    ||||||||| ||||||||||||||||| ||| |||||||||    
T  17395036 tattgacacgaaaatcaaaacaatagaaagataaagtaaaa 17395076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 18300887 - 18300839
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||| |||| || |||| | ||||||||||||||||||||||||    
T  18300887 tttacaaagaaaataaggtattaatacaaaaatcaaaacaatagagaga 18300839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 33273521 - 33273577
Alignment:
Q  271 accaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||| |||| |||| ||||||||||||||||||||||  |||| |||| |||||    
T  33273521 accaaaattttataaagaaaatgagatattgacacaaaaactaaaataataaagaga 33273577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 34134688 - 34134772
Alignment:
Q  255 gacaacttttgtgacgaccaaaactttacaaaggaaatg-agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||| | |||| |||| || ||||||||||||  | || | ||||||| ||||||||| ||||||||||| ||||||||||    
T  34134688 gacaacttatttgacaaccataaatttacaaaggaagagtaggttttgacacgaaaatcaaagcaatagagagataaagtaaaaa 34134772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 37037423 - 37037310
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||||||||||||||||  |||  | | | ||||||||||  || |||| ||  |||||||| || ||||||||  ||||||||||||||  ||||     
T  37037423 aagagttgtgttatttgaacaaccaattttataacaacttttggtacaaccataaacttacaaagaaagtgagatat--acacaaaaatcaaagtaataa 37037326  T
Q  323 agagagaaagtaaaaa 338  Q
    ||||||||| ||||||    
T  37037325 agagagaaaataaaaa 37037310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 42434302 - 42434250
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaa 277  Q
    |||||||||||||||||| || || ||| |||||||||||| ||||| |||||    
T  42434302 gagttgtgttatttgaacatctatttatatgacaacttttgagacgatcaaaa 42434250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 8e-46; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 19055645 - 19055766
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  19055645 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgagatattgtcacaaaaaccaaaacaatag 19055744  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| ||||    
T  19055745 agagagaaagtaaaaaggtaat 19055766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 33100992 - 33100872
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||||| |||| |||||||||||| || ||||||||||||||||||||||||    
T  33100992 agagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaaacaataga 33100893  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||    
T  33100892 gagagaaagtaaaaagataat 33100872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 649954 - 649833
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| |||| ||||||    
T  649954 aagagttgtgttatttgaacatccacatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatag 649855  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  649854 agagagaaagtaaaaagataat 649833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 48470822 - 48470703
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||| ||| |||||||||||||    
T  48470822 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatattggcacagaaaccaaaacaatagag 48470723  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||| ||||    
T  48470722 agagaaagtaaaaaggtaat 48470703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 44519033 - 44519158
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||  ||||||||||||| ||    
T  44519033 atttatgagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtattagcacaaaaatcaaagca 44519132  T
Q  319 atagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||||||    
T  44519133 atagagagagaaagtaaaaagataat 44519158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 26469547 - 26469423
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| | || |||    
T  26469547 tttatgagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccgaagcaa 26469448  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    |||||||||||| ||||||||||||    
T  26469447 tagagagagaaaataaaaagataat 26469423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 222 - 341
Target Start/End: Original strand, 27464942 - 27465061
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| |||||    
T  27464942 taagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 27465041  T
Q  322 gagagagaaagtaaaaagat 341  Q
    |||||| |||||||||||||    
T  27465042 gagagacaaagtaaaaagat 27465061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 35369879 - 35369768
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||||| || |||||||||||||||| ||||||||||||    
T  35369879 tgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaagcaatagagagag 35369780  T
Q  329 aaagtaaaaaga 340  Q
    ||||||||||||    
T  35369779 aaagtaaaaaga 35369768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 31088367 - 31088245
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||  ||||||| || || |||||||| |||| |||||    
T  31088367 taagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaaaaaatgaggtagtggcacaaaaaccaaagcaata 31088268  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||    
T  31088267 gagagagaaagtaaaaagataat 31088245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 23645596 - 23645475
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||| |||||||||||| | ||||||||| |||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||||||||||    
T  23645596 aagagttatgttatttgaacatacatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaaacaatag 23645497  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  23645496 agagagaaagtaaaaagataat 23645475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 225 - 341
Target Start/End: Original strand, 3981914 - 3982030
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||| |||||||||| |||||||| | ||||| ||||||||| ||||||||||||||||||| || |||||||||||||    
T  3981914 gagttgtgttatttgaacatccataaatgtgacaacatttgtgacaatcaaaattttacaaagaaaatgagatattgacacaataaccaaaacaatagag 3982013  T
Q  325 agagaaagtaaaaagat 341  Q
    |||||||||||||||||    
T  3982014 agagaaagtaaaaagat 3982030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 50726136 - 50726255
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| ||||||||||||| || ||||||||| ||||||| ||| ||||| ||||||| || || ||||||||||||||||||||||    
T  50726136 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttgcaaagaaaatgaggtagtggcacaaaaatcaaaacaatagag 50726235  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  50726236 agagaaagtaaaaagataat 50726255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 37619727 - 37619608
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||| |||||||||||| ||||||||||||||||||||| | || ||||||| ||||||||||||||||| ||||| ||||||||||||  ||||||||    
T  37619727 gagttatgttatttgaacatccatatatgtgacaacttttattacaaccaaaattttacaaaggaaatgaggtattggcacaaaaatcaacgcaatagag 37619628  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||| ||||||||||||    
T  37619627 agagaaattaaaaagataat 37619608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 37274919 - 37275040
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||| | ||||| ||| ||||||||||||| || ||||||||||| |||| ||||||    
T  37274919 aagagttgtgttatttgaacatccttacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagcaatag 37275018  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||| ||||||||||||||||||    
T  37275019 agaaagaaagtaaaaagataat 37275040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 43775391 - 43775270
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||| ||||||||||||||  | ||||||||||||||||||| |||| | ||||| ||||||||| |||||||||||||| |||||||  ||||||||||    
T  43775391 aagacttgtgttatttgaatattcatatatgtgacaacttttatgacaatcaaaattttacaaagaaaatgagatattgatacaaaaactaaaacaatag 43775292  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  43775291 agagagaaagtaaaaagataat 43775270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 222 - 329
Target Start/End: Original strand, 45121366 - 45121472
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| |||||    
T  45121366 taagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgag-tagtggcacaaaaaccaaagcaata 45121464  T
Q  322 gagagaga 329  Q
    ||||||||    
T  45121465 gagagaga 45121472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 231 - 341
Target Start/End: Complemental strand, 50932481 - 50932373
Alignment:
Q  231 tgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaa 330  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||      
T  50932481 tgttatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattgacacaaaaatcaaagcaatagaaagag-- 50932384  T
Q  331 agtaaaaagat 341  Q
    |||||||||||    
T  50932383 agtaaaaagat 50932373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 344
Target Start/End: Complemental strand, 3851335 - 3851222
Alignment:
Q  231 tgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaa 330  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||| |||| |||||||||||| || ||||| ||||| ||||||||||||||||  |    
T  3851335 tgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttataaaggaaatgaggtagtgacagaaaaaccaaaacaatagagagatca 3851236  T
Q  331 agtaaaaagataat 344  Q
    ||||||||||||||    
T  3851235 agtaaaaagataat 3851222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 51718516 - 51718633
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||    ||||||||||||||||  || |||||||||||||||||||||  || ||||||||||||||||| |||||    
T  51718516 aagagttgtgttatttgaacatccat----gtgacaacttttgtgataactaaaactttacaaaggaaatgaagtagtgacacaaaaatcaaaataatag 51718611  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||| |||||||||||||    
T  51718612 agagagaaggtaaaaagataat 51718633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 45640486 - 45640372
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || ||||||||||||||||||||  | ||||||| |||||||| |||||||||||||| ||||||||||||| ||||||    
T  45640486 aagagttgtgttatttgaacatctatatatgtgacaacttttgttgcaaccaaaattttacaaa-gaaatgagatattggcacaaaaatcaaagcaatag 45640388  T
Q  323 agagagaaagtaaaaa 338  Q
    ||||| |||| |||||    
T  45640387 agagataaagcaaaaa 45640372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 44914453 - 44914579
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaactttt-gtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaac 317  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||| | ||| | ||||| ||||||||||||||||| || |||||||||||  ||| |    
T  44914453 atttaggagttgtgttatttgaacatccatatatgtgacaattttttgcgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaactaaagc 44914552  T
Q  318 aatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||| ||||||||||||    
T  44914553 aatagagagagaaaataaaaagataat 44914579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 341
Target Start/End: Original strand, 8350087 - 8350200
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||| || || ||||||||||| |||| ||||  ||    
T  8350087 gagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaa-tttacaaaggaaataaggtagtgacacaaaaaccaaagcaat--ag 8350183  T
Q  325 agagaaagtaaaaagat 341  Q
    |||||||||||||||||    
T  8350184 agagaaagtaaaaagat 8350200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 52576188 - 52576309
Alignment:
Q  224 agagttgtgttatttgaacg-tccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||  | |||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||  | |||||||| |||| ||||||    
T  52576188 agagttgtgttatttgaacaattcatataggtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaccggcacaaaaaccaaagcaatag 52576287  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  52576288 agagagaaagtaaaaaaataat 52576309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 2571819 - 2571698
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaacttt-acaaaggaaatgagatattgacacaaaaat-caaaacaatag 322  Q
    |||||||||||||||||| |||||  || |||||||||||||||| ||||||| ||| |||||| ||||||| || |||||||||||| |||||||||||    
T  2571819 gagttgtgttatttgaacatccatgcatatgacaacttttgtgacaaccaaaattttaacaaagaaaatgaggtagtgacacaaaaatacaaaacaatag 2571720  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||| ||||||||| ||||||    
T  2571719 agagaaaaagtaaaaggataat 2571698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 18434980 - 18434859
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||  || || ||  |||||||||||||||| ||||||| ||| ||||| ||||||  ||||| |||||||||||||||||||     
T  18434980 aagagttgtgttatttgaaaatctatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattggcacaaaaatcaaaacaataa 18434881  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  18434880 agagagaaagtaaaaacataat 18434859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 45333891 - 45333784
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| || |||||||||| || ||||||||| |  |||| ||||||||||||||||| || |||||||||||||||| ||||| |||||    
T  45333891 ttgtgttatttgaacatctatatatgtgataatttttgtgacaattaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagcaataaagaga 45333792  T
Q  328 gaaagtaa 335  Q
    ||||||||    
T  45333791 gaaagtaa 45333784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 343
Target Start/End: Original strand, 15082939 - 15083056
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||| ||||| |||| | ||||||||| | ||||||||| || | ||||  ||||||||||||||||  |||||||||||||| |||| ||||||||    
T  15082939 gagttgtattattcgaacattcatatatgtcaaaacttttgt-acaatcaaacttttacaaaggaaatgaagtattgacacaaaaaccaaagcaatagag 15083037  T
Q  325 agagaaagtaaaaagataa 343  Q
    |||||||||||||||||||    
T  15083038 agagaaagtaaaaagataa 15083056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 21401588 - 21401490
Alignment:
Q  218 aatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaa 316  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||||  || | ||||| ||||||||| ||||||| |||||||||||||| |||||    
T  21401588 aattgaagagttgtgttatttgaacatccatttatgtgacaacttttgaaacaatcaaaattttacaaagaaaatgaggtattgacacaaaaaccaaaa 21401490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 30467418 - 30467540
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| || |  ||| |||||||||||||||| || |||  ||||||||| ||| |||| ||||||||| |||||||| |||||    
T  30467418 taagagttgtgttatttgaacatctaattatatgacaacttttgtgacaactaaagttttacaaagaaaacgagagattgacacacaaatcaaagcaata 30467517  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||||| ||||||| || |||||    
T  30467518 gagagaaaaagtaacaacataat 30467540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 9566846 - 9566967
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| | ||  ||| |||||||||||| ||| ||||||| |||||| || ||||  | |||||||||||||| |||| ||||||    
T  9566846 aagagttgtgttatttgaacattcaattatatgacaacttttgagacaaccaaaattttacatagaaaatagggtattgacacaaaaaccaaagcaatag 9566945  T
Q  323 agagagaaagtaaaaagataat 344  Q
    || ||||||||||||| |||||    
T  9566946 agtgagaaagtaaaaacataat 9566967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 37685512 - 37685395
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||| |||||||||||| | |||| |||||| || ||||||||| |  |||| |||||||| |||||||| || |||||||||||||||| |||||||     
T  37685512 gagttatgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaatcaaagcaataga- 37685414  T
Q  325 agagaaagtaaaaagataat 344  Q
     |||||||||||||||||||    
T  37685413 -gagaaagtaaaaagataat 37685395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 37700006 - 37700123
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||| |||||||||||| | |||| |||||| || ||||||||| |  |||| |||||||| |||||||| || |||||||||||||||| ||||  ||    
T  37700006 gagttatgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaatcaaagcaat--ag 37700103  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  37700104 agagaaagtaaaaagataat 37700123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 15469945 - 15470063
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| | ||||||||||| || ||||||||| |  |||| |||| |||||||||||| || |  | |||||| |||||||||||||    
T  15469945 gagttgtgttatttgaacattcatatatgtgataa-ttttgtgacaattaaaattttataaaggaaatgaggtagtagcgcaaaaaccaaaacaatagag 15470043  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||| ||||||||||||    
T  15470044 agagaaaataaaaagataat 15470063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 224 - 338
Target Start/End: Original strand, 8828011 - 8828122
Alignment:
Q  224 agagttgtgttatttgaacgtccatat-atgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||    |||| ||||||||| ||||| ||| ||||||| |||| ||| |||||||| ||||| |||||||| |||| ||||||    
T  8828011 agagttgtgttatttgaac----atatcatgtgacaatttttgcgacaaccaaaattttataaaagaaatgaggtattggcacaaaaaccaaagcaatag 8828106  T
Q  323 agagagaaagtaaaaa 338  Q
    ||||||||||||||||    
T  8828107 agagagaaagtaaaaa 8828122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 271 - 344
Target Start/End: Original strand, 27533418 - 27533491
Alignment:
Q  271 accaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||    
T  27533418 accaaaattttacaaagaaaatgaggtattgacataaaaatcaaaacaataaagagagaaagtaaaaacataat 27533491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 14983925 - 14983837
Alignment:
Q  256 acaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||| ||| |||| || || |||||| ||| ||||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  14983925 acaacttttgggacaaccataatttcacaaagaaaaagagatattgacacaaaaactaaaacaatagagagagaaagtaaaaacataat 14983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 30735180 - 30735300
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||  ||||| ||||||| || ||||||||| | ||||| |||| |||| ||||||| || |  || |||||  |||||||||||    
T  30735180 agagttgtgttatttgaatatccatgtatgtgataatttttgtgacaatcaaaattttataaagtaaatgaggtagtagcataaaaactaaaacaataga 30735279  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||    
T  30735280 gagagaaagtaaaaaaataat 30735300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 31827135 - 31827015
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| || || ||  ||||||||||||  || ||||||| ||||||||  ||||||| |||||||||||||| |||| |||||||    
T  31827135 agagttgtgttatttgaacatctatttagatgacaacttttgatacaaccaaaattttacaaaaaaaatgagttattgacacaaaaaccaaatcaataga 31827036  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||| |  ||||||| |||||    
T  31827035 gagaaagggtaaaaacataat 31827015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 344
Target Start/End: Original strand, 40861154 - 40861267
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    |||||||||||||| || ||||||||| ||||||||||||| || |||| |||| ||||||||| ||||| || |||||||| ||||  |  | ||||||    
T  40861154 tgtgttatttgaacatctatatatgtgtcaacttttgtgacaactaaaattttataaaggaaataagatagtggcacaaaaaccaaagta--acagagag 40861251  T
Q  329 aaagtaaaaagataat 344  Q
    ||||||||||||||||    
T  40861252 aaagtaaaaagataat 40861267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 46907384 - 46907271
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||| ||||| |||  ||||||||||| ||| | ||||| |||| |||| ||||||| ||||||||||      ||||||    
T  46907384 atttaagagttgtgttatttgaacatccatttatacgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacaca------aaaaca 46907291  T
Q  319 atagagagagaaagtaaaaa 338  Q
    ||||||||||||| ||||||    
T  46907290 atagagagagaaaataaaaa 46907271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 343
Target Start/End: Complemental strand, 50149131 - 50149011
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||  | ||| ||||||||||||  || | ||||| ||||||||| ||||||   ||||||||||||| |||| ||||||    
T  50149131 aagagttgtgttatttgaacatcattttatatgacaacttttgcaacaatcaaaattttacaaagaaaatgattgattgacacaaaaaccaaagcaatag 50149032  T
Q  323 agagagaaagtaaaaagataa 343  Q
    ||| |||||||||||| ||||    
T  50149031 agaaagaaagtaaaaatataa 50149011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 50775043 - 50775163
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||||||||||||||| |||| |   |||||| ||||||||| |||| || ||||||||| ||| ||  | |||||||||||| |||| |||||||    
T  50775043 agagttgtgttatttgaacgaccatttgattgacaaattttgtgacaaccataattttacaaagaaaaagatgtgttgacacaaaaaccaaagcaataga 50775142  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||| |||||||||| |||||    
T  50775143 gagataaagtaaaaacataat 50775163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 9988134 - 9988016
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| ||  | ||| | ||||| ||||  || ||||||| ||||||||  |||||||  |||| ||||||||||||| |||||||||    
T  9988134 agttgtgttatttgaacatcattttatattacaacctttgcaacaaccaaaattttacaaataaaatgagtgattggcacaaaaatcaaagcaatagaga 9988035  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  9988034 gagaaagtaaaaatataat 9988016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 51571234 - 51571347
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||||||||  |||| |   |||||| ||||| ||| |||| || ||||||||| ||| ||| |||||||||||||| |||| |||||||     
T  51571234 gagttgtgttatttgaacaaccatttgattgacaatttttgggacaaccataattttacaaagaaaaagaggtattgacacaaaaaccaaagcaatagaa 51571333  T
Q  325 agagaaagtaaaaa 338  Q
    ||||||||||||||    
T  51571334 agagaaagtaaaaa 51571347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 10627697 - 10627817
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||| |||||||| ||| |  || |||||||||| ||||| ||| | ||||| |||| |||| ||||| | |||||| ||||||||||||||||||||    
T  10627697 agagttctgttatttcaacatatatctatgtgacaatttttgagacaaacaaaattttataaagaaaatgtggtattgatacaaaaatcaaaacaataga 10627796  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||| ||||| |||| |||||    
T  10627797 gagataaagtgaaaatataat 10627817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 338
Target Start/End: Original strand, 26020970 - 26021077
Alignment:
Q  231 tgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaa 330  Q
    |||||||||||| | ||| ||| ||||| |||||| ||| | ||||| ||||||||  ||| ||||||||||||||| ||||||| ||||||||| | ||    
T  26020970 tgttatttgaacattcatttatatgacatcttttgagacaatcaaaattttacaaaaaaaaagagatattgacacaataatcaaatcaatagagatataa 26021069  T
Q  331 agtaaaaa 338  Q
    ||||||||    
T  26021070 agtaaaaa 26021077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 344
Target Start/End: Complemental strand, 39712558 - 39712443
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    ||||||||||||||  |||| |  |||| |||||||||||| ||||  | |||||||||||||  ||||| ||||||  ||||||||| |||||| ||||    
T  39712558 tgtgttatttgaacaaccatttgagtgataacttttgtgacaaccactaatttacaaaggaaagtagatagtgacacggaaatcaaaataatagaaagag 39712459  T
Q  329 aaagtaaaaagataat 344  Q
    |||||||||| |||||    
T  39712458 aaagtaaaaaaataat 39712443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 49065253 - 49065371
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||  || || ||| |||||| |||   ||  ||||||| ||||||||| ||||||  ||||| |||||||| |||| |||||||||    
T  49065253 agttgtgttatttgaatatctatttatatgacaattttaaagataaccaaaattttacaaagaaaatgaagtattggcacaaaaaccaaagcaatagaga 49065352  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  49065353 gagaaagtaaaaacataat 49065371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 3159513 - 3159440
Alignment:
Q  271 accaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| ||||||||||||||||| || || ||||||||  ||| |||||||||||| |||||||||||||||    
T  3159513 accaaaattttacaaaggaaatgaggtagtggcacaaaaacaaaagcaatagagagaggaagtaaaaagataat 3159440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 12657367 - 12657286
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattg-acacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| ||||||| |||| |||||||||||| || || ||||||||| |||| ||||||| ||||||||||||||||||||    
T  12657367 tgtgacaaccaaaattttataaaggaaatgaggtagtggacacaaaaaccaaagcaatagaaagagaaagtaaaaagataat 12657286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 48261293 - 48261204
Alignment:
Q  255 gacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||| ||| | || |  ||||||||||||| ||| ||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  48261293 gacaacttttgagacaatcatatttttacaaaggaaaagaggtattggcacaaaaaccaaagcaatagagagagaaagtaaaaacataat 48261204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 49647038 - 49647150
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||| |||||||||||| | ||| ||| ||||||||||||  || || |||| ||||  ||  ||| ||| |||||||||||||| ||||||||||||    
T  49647038 agagttatgttatttgaacattcatttatatgacaacttttgaaacaactaaaattttatgaaa-aaacgagttattgacacaaaaaccaaaacaataga 49647136  T
Q  324 gagagaaagtaaaa 337  Q
    ||||||||||||||    
T  49647137 gagagaaagtaaaa 49647150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 4776909 - 4776821
Alignment:
Q  255 gacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataa 343  Q
    ||||||||||||||| |   ||| |||| |||||||||||| || || |||||||||||||  |||||||||| |||||||||||||||    
T  4776909 gacaacttttgtgacaatttaaattttataaaggaaatgaggtagtggcacaaaaatcaaagtaatagagagataaagtaaaaagataa 4776821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 6693292 - 6693223
Alignment:
Q  273 caaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||||||||||  ||||||||||||| |||||    
T  6693292 caaaattttacaaaggaaatgaggtattgacataaaaaccaaaacaataga--gagaaagtaaaaaaataat 6693223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 327
Target Start/End: Complemental strand, 6809757 - 6809661
Alignment:
Q  231 tgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    |||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| | || |||||| | |||  |||||||||||||||||| ||||||    
T  6809757 tgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttatatagaaaatgatacattagcacaaaaatcaaaacaatggagaga 6809661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 11597821 - 11597701
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||| |||||||||||||| ||||| |   ||||||||| || ||| |||| |  ||||||||| |||  |||||||  ||| |||| ||||||||||||    
T  11597821 agaggtgtgttatttgaacatccatttgcttgacaacttatgggacaaccatagatttacaaagaaaagtagatattagcacgaaaaccaaaacaataga 11597722  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||    
T  11597721 gagagaaagtaaaaacataat 11597701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 14490573 - 14490640
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaaga 175  Q
    |||||| |||||| ||||||||||| ||| ||||| | |||| |||||||||||||||||||||||||    
T  14490573 aagaagttaaaatggaatatattacgaaatcaatgagtctttcctagcacaagatgtactaagaaaga 14490640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 30570706 - 30570590
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| | ||| ||| ||| || |||||  || | ||||| ||||||||| ||  ||||||||  |||||||||||||||||||||      
T  30570706 agttgtgttatttgaacattcatttatatgataatttttgaaacaatcaaaattttacaaagaaatcgagatattagcacaaaaatcaaaacaataga-- 30570609  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  30570608 gagaaagtaaaaacataat 30570590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 327
Target Start/End: Original strand, 19947632 - 19947734
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |  || ||| |||||||||||| ||| ||||||| |||| |||| ||| ||| |||||  ||||||| |||| ||||||||    
T  19947632 gagttgtgttatttgaacatttatttatatgacaacttttgagacaaccaaaattttataaagaaaaggaggtattgggacaaaaaccaaagcaatagag 19947731  T
Q  325 aga 327  Q
    |||    
T  19947732 aga 19947734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 37985323 - 37985393
Alignment:
Q  274 aaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| |||| |||||||||||| || || ||||||||| ||| ||||||| ||||||||||||||||||||    
T  37985323 aaaattttataaaggaaatgaggtagtgtcacaaaaattaaagcaatagaaagagaaagtaaaaagataat 37985393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 2269454 - 2269579
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||  | ||  ||| ||||||||||||  || ||||||| ||||   || |||| || |||||||||||||| |||| ||    
T  2269454 atttaagagttgtgttatttgaatattcaattatatgacaacttttgatacaaccaaaattttatttagaaaataaggtattgacacaaaaaccaaagca 2269553  T
Q  319 atagagagagaaagtaaaaagataat 344  Q
    ||  || ||||||||||||| |||||    
T  2269554 atcaagtgagaaagtaaaaacataat 2269579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 39849095 - 39849160
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| |||| |||||||| ||||||||||||| ||||||||||| |||| |||||||||| |||||    
T  39849095 tttataaagaaaatgagacattgacacaaaaaacaaaacaatagtgagaaaaagtaaaaatataat 39849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 49570102 - 49570061
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  49570102 cacaaaaatcaaaacaatagagagagaaagtaaaaatataat 49570061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 4466877 - 4466759
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||||||||  |||| |   |||||| |||||  || |||| || |||||||||||||   | ||||||||||||||||||| ||||| |     
T  4466877 gagttgtgttatttgaacaaccatttga-tgacaatttttggaacaaccataattttacaaaggaaaaatggtattgacacaaaaatcaaagcaataaaa 4466779  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  4466778 agagaaagtaaaaacataat 4466759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 338
Target Start/End: Original strand, 18512229 - 18512344
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||| ||| || || ||| ||| || ||||  ||| || |||| |||| |||| ||||||| |||||||| |||||  ||| ||||||    
T  18512229 aagagttgtgttatttcaacatcaatttatatgataatttttaagacaactaaaattttataaagaaaatgaggtattgacataaaaactaaagcaatag 18512328  T
Q  323 agagagaaagtaaaaa 338  Q
    ||||| ||||||||||    
T  18512329 agagataaagtaaaaa 18512344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 344
Target Start/End: Original strand, 25509123 - 25509186
Alignment:
Q  281 tacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| ||||||| |||||||||||||| |||||||||||| | ||||| |||||| |||||    
T  25509123 tacaaagaaaatgaggtattgacacaaaaaccaaaacaatagaaaaagaaaataaaaacataat 25509186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 48858951 - 48858888
Alignment:
Q  281 tacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| || | ||||| |||||||||||||||| |||||||||||| |||||||| ||||||    
T  48858951 tacaaagaaatttagatagtgacacaaaaatcaaagcaatagagagaggaagtaaaatgataat 48858888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 41677222 - 41677260
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaact 261  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  41677222 aagagttgtgttatttgaacatccatatatgtgacaact 41677260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 50333393 - 50333339
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaa 277  Q
    |||| ||||||||||| | | |||||||||||||||||||||||||| |||||||    
T  50333393 aagaattgtgttatttaaccatccatatatgtgacaacttttgtgacaaccaaaa 50333339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 29877427 - 29877370
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    ||||||||| |||| |  ||||||||| |||| |||||||||||||||||||||||||    
T  29877427 tttacaaagaaaattatgtattgacacgaaaaccaaaacaatagagagagaaagtaaa 29877370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 30745115 - 30745058
Alignment:
Q  280 ttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||| |||| |  |||||||||||||| |||||||||||||||| |||||||||    
T  30745115 ttacaaagaaaattatgtattgacacaaaaaccaaaacaatagagagataaagtaaaa 30745058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 30766566 - 30766509
Alignment:
Q  280 ttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||| |||| |  |||||||||||||| |||||||||||||||| |||||||||    
T  30766566 ttacaaagaaaattatgtattgacacaaaaaccaaaacaatagagagataaagtaaaa 30766509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 333
Target Start/End: Original strand, 48103250 - 48103361
Alignment:
Q  225 gagttgtgttatttgaa-cgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattg--acacaaaaatcaaaacaata 321  Q
    |||||||| |||||||| | || || ||| |||||||||||| ||| ||||||| ||||||||| |||| || |||||  | | ||||| ||||| ||||    
T  48103250 gagttgtgatatttgaaacatctatttatatgacaacttttgagacaaccaaaattttacaaagaaaataaggtattggcaaaaaaaaaccaaaataata 48103349  T
Q  322 gagagagaaagt 333  Q
    ||||||||||||    
T  48103350 gagagagaaagt 48103361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 51080049 - 51080097
Alignment:
Q  296 atattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| |||||    
T  51080049 atatttacacaaaaaccaaagcaatagagagagaaagtaaaaatataat 51080097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 26208193 - 26208240
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||||||||  |||| |||||| |||||    
T  26208193 tattgacacaaaaatcaaaacaatagagaaggaaaataaaaacataat 26208240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 344
Target Start/End: Complemental strand, 29359779 - 29359703
Alignment:
Q  266 tgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||| ||||||||| ||||||  || || |||||||| |||| |||||||  |||||||||||||||||||    
T  29359779 tgacaaccaaaattttacaaagaaaatgatgtaatggcacaaaaaccaaagcaataga--gagaaagtaaaaagataat 29359703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 33070732 - 33070673
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||||  ||||| ||||||  ||||||||  |||||||||||||||||||||    
T  33070732 tttacaaaggaaagtagatagtgacacggaaatcaaagtaatagagagagaaagtaaaaa 33070673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 338
Target Start/End: Original strand, 44517847 - 44517962
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||||||||||||||||  ||||   ||||| |||||||| ||  || | || ||||||||| |||  |  |||||||||||||||||||| ||||     
T  44517847 aagagttgtgttatttgaacaaccattcgtgtgataacttttgggataactataaatttacaaagaaaaatatgtattgacacaaaaatcaaaataataa 44517946  T
Q  323 agagagaaagtaaaaa 338  Q
    ||| | ||||||||||    
T  44517947 agataaaaagtaaaaa 44517962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 344
Target Start/End: Complemental strand, 49660335 - 49660244
Alignment:
Q  253 gtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| || |  | |||||||||||||  ||| | ||||||  ||| ||||  ||||||||||||||||||||| |||||    
T  49660335 gtgacaacttttgtgacaactactaatttacaaaggaaagtagacagtgacacggaaaccaaagtaatagagagagaaagtaaaaaaataat 49660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 611595 - 611636
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||||| |||||||||| ||||| ||||||||||    
T  611595 tattgacacaaaaaccaaaacaatatagagataaagtaaaaa 611636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 260
Target Start/End: Complemental strand, 29359818 - 29359773
Alignment:
Q  215 aaaaatttaagagttgtgttatttgaacgtccatatatgtgacaac 260  Q
    |||||| ||||||||||||||||||||| | ||||||| |||||||    
T  29359818 aaaaatataagagttgtgttatttgaacattcatatatatgacaac 29359773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 31975120 - 31975056
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||| |||| | ||||||||| |||||||| |||||||| ||||||| |||||    
T  31975120 tttacaaagaaaatgaggtattaatacaaaaatc-aaacaataaagagagaaggtaaaaacataat 31975056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 34818010 - 34818051
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    
T  34818010 cacaaaaatcaaagcaatagaaagagaaagtaaaaatataat 34818051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 41070934 - 41070893
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||| |||||||||| ||||||| ||||||||||||||    
T  41070934 tattgacataaaaatcaaagcaatagatagagaaagtaaaaa 41070893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 47721520 - 47721479
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  47721520 tattgacacgaaaatcaaagcaatagagagataaagtaaaaa 47721479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 47728512 - 47728471
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  47728512 tattgacacgaaaatcaaagcaatagagagataaagtaaaaa 47728471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 50239056 - 50239165
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    ||||||||||||||  |||| |  ||||||||||||||||| ||||  | |||||||| ||||  ||||| ||||||  |||  |||  ||| |||||||    
T  50239056 tgtgttatttgaacaaccatttgagtgacaacttttgtgacaaccactaatttacaaaagaaagtagataatgacacggaaaataaagtaattgagagag 50239155  T
Q  329 aaagtaaaaa 338  Q
    ||||||||||    
T  50239156 aaagtaaaaa 50239165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 23665687 - 23665731
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaagtaaaaagataa 343  Q
    |||||||||||| |||| |||| ||||||||||||||||| ||||    
T  23665687 ttgacacaaaaaccaaagcaattgagagagaaagtaaaaatataa 23665731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 35136949 - 35136913
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaag 339  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  35136949 cacaaaaatcaaagcaatagagagataaagtaaaaag 35136913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 51436621 - 51436657
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaa 315  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  51436621 tttacaaagaaaacgagatattgacacaaaaatcaaa 51436657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 26791127 - 26791251
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| |||    
T  26791127 tttaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagttagtggcacaaaaaccaaagcaa 26791226  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||||    
T  26791227 tagagagagaaagtaaaaagataat 26791251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 33037703 - 33037584
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||||||||||||||| ||||||||    
T  33037703 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagcaatagag 33037604  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||| ||||||||||||||||    
T  33037603 agaaaaagtaaaaagataat 33037584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 1671728 - 1671606
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||| || ||||||||||| ||||||||||    
T  1671728 taagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtactgacacaaaaaccaaaacaata 1671629  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    || ||||||||||||||||||||    
T  1671628 gaaagagaaagtaaaaagataat 1671606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 7287077 - 7287196
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| | |||||||||||||||||||||||| ||||||| ||||||||| ||||||| || ||||||||||| |||||||||||||    
T  7287077 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaatagag 7287176  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  7287177 agagaaagtaaaaatataat 7287196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 36739134 - 36739012
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||| |||||||| |||||||| || ||||||||||| |||| |||||    
T  36739134 taagagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaaagaaatgaggtagtgacacaaaaaccaaagcaata 36739035  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||    
T  36739034 gagagagaaagtaaaaagataat 36739012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 1274545 - 1274422
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||| |||||||||| ||||||||||||||||||||| |||| |||    
T  1274545 tttaagagttgtgttatttgaacatccatatatgtgacaacttttatg-caaccaaaattttacaaagggaatgagatattgacacaaaaaccaaagcaa 1274447  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||||||||| ||||    
T  1274446 tagagagaggaagtaaaaaggtaat 1274422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 41321443 - 41321319
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    |||| |||||||||||||||||  |||||||||||||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||| ||||  ||    
T  41321443 tttatgagttgtgttatttgaatatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaaccaaagtaa 41321344  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||||||    
T  41321343 tagagagagaaagtacaaagataat 41321319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 5168367 - 5168247
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||| || |||| ||||||||| ||||||| || || ||||||||||||| |||||||    
T  5168367 agagttgtgttatttgaacattcatatatatgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtggcacaaaaatcaaagcaataga 5168268  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||    
T  5168267 gagagaaagtaaaaagataat 5168247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 28306020 - 28306139
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| || || |||||| | |||| ||||||||    
T  28306020 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaagaccaaagcaatagag 28306119  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||| ||||||||    
T  28306120 agagaaagtaagaagataat 28306139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 18258679 - 18258800
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| ||||  ||||     
T  18258679 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagaaatat 18258778  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||| ||| ||||||||||||    
T  18258779 agagaaaaaataaaaagataat 18258800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 28467339 - 28467460
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||| ||||| | |||||||||||||| ||||||||| ||||||| |||| ||||||||||||  | ||||||||||| |||||||||||    
T  28467339 aagagttgtgttatctgaacattcatatatgtgacaatttttgtgacaaccaaaattttataaaggaaatgaggcagtgacacaaaaaccaaaacaatag 28467438  T
Q  323 agagagaaagtaaaaagataat 344  Q
    || |||||||||||||||||||    
T  28467439 agtgagaaagtaaaaagataat 28467460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 35634722 - 35634843
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaagg-aaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||  ||||||| |||||||||| ||||||  ||||| |||||||| |||||||||||    
T  35634722 agagttgtgttatttgaacatccatatatgtgacaacttttatgataaccaaaattttacaaaggaaaatgaattattggcacaaaaaccaaaacaatag 35634821  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||||||||    
T  35634822 agagagaaactaaaaagataat 35634843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 15479652 - 15479533
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| |  |||| ||||||||  ||||||| |||||||| || || |||||||||||||    
T  15479652 gagttgtgttatttgaacatccataaatgtgacaacttttgtgacaattaaaattttacaaaaaaaatgaggtattgacaaaataaccaaaacaatagag 15479553  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  15479552 agagaaagtaaaaagataat 15479533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 228 - 338
Target Start/End: Complemental strand, 2972504 - 2972394
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| |  ||||||||||||||||||||||| | ||||| || || ||||||||||| ||||||||||||||||||| |||||||||||    
T  2972504 ttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaatttcacgaaggaaatgaggtattgacacaaaaatcaaagcaatagagaga 2972405  T
Q  328 gaaagtaaaaa 338  Q
    |||||||||||    
T  2972404 gaaagtaaaaa 2972394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 224 - 338
Target Start/End: Original strand, 14051202 - 14051316
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| || || |||||||| ||||||||||||    
T  14051202 agagttgtgttattcaaacatccatatatgtgataacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaaacaataga 14051301  T
Q  324 gagagaaagtaaaaa 338  Q
    |||||||||||||||    
T  14051302 gagagaaagtaaaaa 14051316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 225 - 341
Target Start/End: Complemental strand, 14923256 - 14923140
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| || ||||||||||||||||| ||||  ||||||| |||||||| |||||||| || || |||||||| |||| ||||||||    
T  14923256 gagttgtgttatttgaacatcgatatatgtgacaactttcgtgaaaaccaaaattttacaaaagaaatgaggtagtggcacaaaaaccaaagcaatagag 14923157  T
Q  325 agagaaagtaaaaagat 341  Q
    |||||||||||||||||    
T  14923156 agagaaagtaaaaagat 14923140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 233 - 344
Target Start/End: Original strand, 7076464 - 7076575
Alignment:
Q  233 ttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaag 332  Q
    |||||||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||  || || |||||||| |||| ||||||||||||||||    
T  7076464 ttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaagtaatggcacaaaaaccaaagcaatagagagagaaag 7076563  T
Q  333 taaaaagataat 344  Q
    |||||| |||||    
T  7076564 taaaaaaataat 7076575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 226 - 340
Target Start/End: Complemental strand, 1764406 - 1764292
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| | |||||||||||||||||||||||| ||||||| |||| |||||||||||| || || || ||||| |||| ||||| |||    
T  1764406 agttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcataaaaaccaaagcaataaaga 1764307  T
Q  326 gagaaagtaaaaaga 340  Q
    |||||||||||||||    
T  1764306 gagaaagtaaaaaga 1764292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 13168704 - 13168586
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||| ||| | |||||||||||||||||||||||| | ||||| |||||||||||||||||||| || |||||||| ||||  |||||| |    
T  13168704 agttgtgttatttcaacattcatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagtaatagaaa 13168605  T
Q  326 gagaaagtaaaaagataat 344  Q
    || |||||||||| |||||    
T  13168604 gaaaaagtaaaaaaataat 13168586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 8687076 - 8686955
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||| ||||||||||||| | ||||||||||||||||||| | || | ||||| ||||||||| ||||||| |||||||||||||| ||||||||||     
T  8687076 aagagtagtgttatttgaacattcatatatgtgacaacttttataacaatcaaaattttacaaagaaaatgaggtattgacacaaaaaccaaaacaataa 8686977  T
Q  323 agagagaaagtaaaaagataat 344  Q
    | | | ||||||||||||||||    
T  8686976 aaaaataaagtaaaaagataat 8686955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 39591865 - 39591744
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || || ||| ||||||| |||||||| ||||||  ||||||||| |||||||| ||||||||| ||| |||| ||||||    
T  39591865 aagagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaatag 39591766  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||| || |||||    
T  39591765 agagagaaagtaacaacataat 39591744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 39592257 - 39592136
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || || ||| ||||||| |||||||| ||||||  ||||||||| |||||||| ||||||||| ||| |||| ||||||    
T  39592257 aagagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaatag 39592158  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||| || |||||    
T  39592157 agagagaaagtaacaacataat 39592136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 39054773 - 39054651
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    |||| |||||||||||||||| ||||| ||  |||||||||||||||  | ||||| ||| ||||| |||||| |||||  ||||||||||||| |||||    
T  39054773 taagcgttgtgttatttgaacatccatttagatgacaacttttgtgataatcaaaattttgcaaagaaaatgatatatttgcacaaaaatcaaagcaata 39054674  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| |||||    
T  39054673 gagagagaaagtaaaaacataat 39054651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 336
Target Start/End: Complemental strand, 22972302 - 22972189
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||| ||| | |||||||||| ||| || |||| ||||||||| |||| || |||| | ||||||| |||||||||||    
T  22972302 aagagttgtgttatttgaacatccatttatataacaacttttgagacaactaaaattttacaaagaaaataaggtattaatacaaaaaccaaaacaatag 22972203  T
Q  323 agagagaaagtaaa 336  Q
    ||||||||||||||    
T  22972202 agagagaaagtaaa 22972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 17626175 - 17626062
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||      ||||||    
T  17626175 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacaca------aaaaca 17626082  T
Q  319 atagagagagaaagtaaaaa 338  Q
    ||||||||||||| ||||||    
T  17626081 atagagagagaaaataaaaa 17626062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 33958175 - 33958266
Alignment:
Q  253 gtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| |||| |||| || ||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  33958175 gtgacaacttttatgacaaccataaatttacaaagaaaaagagatattgacacaaaaaccaaagcaatagagagagaaagtaaaaatataat 33958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 7552853 - 7552972
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||| ||  |||||||||||||||| ||||||| ||| ||||| ||||||  ||||||||||||||||||  || |      
T  7552853 aagagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatcaatgcagt-- 7552950  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  7552951 agagagaaagtaaaaacataat 7552972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 18660941 - 18660824
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||| ||||| |||| | ||||||||| | ||||||||| || | ||||  ||||||||||||||||  ||||| |||||||| |||| ||||||||    
T  18660941 gagttgtattattcgaacattcatatatgtcataacttttgt-acaatcaaacttttacaaaggaaatgaagtattggcacaaaaaccaaagcaatagag 18660843  T
Q  325 agagaaagtaaaaagataa 343  Q
    |||||||||||||||||||    
T  18660842 agagaaagtaaaaagataa 18660824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 19521950 - 19522010
Alignment:
Q  284 aaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  19521950 aaaggaaatgaggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagataat 19522010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 42175101 - 42174985
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| || ||||||||| |||||||| ||||   ||||| |||| |||||||||  | || ||||||||| ||||||  ||||||||    
T  42175101 agttgtgttatttgaacatcgatatatgtgtcaacttttatgacagtcaaaattttataaaggaaat--ggtagtgacacaaagatcaaaggaatagaga 42175004  T
Q  326 gagaaagtaaaaagataat 344  Q
    || ||||||||||||||||    
T  42175003 gaaaaagtaaaaagataat 42174985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 13310068 - 13309947
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||| ||||||||||||||| ||||| ||  |||||| ||||| ||| | ||||  ||||||||| ||||||| |||| ||||||||| ||||  | |||    
T  13310068 aagaattgtgttatttgaacatccatttagatgacaatttttgagacaatcaaatttttacaaagaaaatgaggtattaacacaaaaaccaaagtagtag 13309969  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  13309968 agagagaaagtaaaaacataat 13309947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 35646556 - 35646447
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||| ||| ||||||||||||||||||            |||| ||||||||||||||||| || ||||||||||| |||| |||||     
T  35646556 aagagttgtgttatttaaacatccatatatgtgacaact------------aaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatat 35646469  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  35646468 agagagaaagtaaaaaaataat 35646447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 344
Target Start/End: Complemental strand, 19952179 - 19952064
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    |||||||||||||   |||| ||||| ||||||||   ||| |||| || ||||||||| |||| || ||||||| |  |||||||||||||||||| ||    
T  19952179 tgtgttatttgaaaaaccatttatgtcacaactttatggacaaccataaatttacaaagaaaattaggtattgacgcggaaatcaaaacaatagagatag 19952080  T
Q  329 aaagtaaaaagataat 344  Q
    |||||||||| |||||    
T  19952079 aaagtaaaaacataat 19952064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 37645241 - 37645174
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaaga 175  Q
    |||||| |||||| ||||||||||| ||| ||||| | |||| |||||||||||||||||||||||||    
T  37645241 aagaagttaaaatggaatatattacgaaatcaatgagtctttcctagcacaagatgtactaagaaaga 37645174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 37826916 - 37826849
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaaga 175  Q
    ||||||||||||| ||||||||||| |||  |||| | |||| |||||||||||||||||||||||||    
T  37826916 aagaagctaaaatggaatatattacgaaattaatgagtctttcctagcacaagatgtactaagaaaga 37826849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 302
Target Start/End: Complemental strand, 3565268 - 3565190
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattga 302  Q
    ||||||||||||||||||| ||||  |  ||||||||||||| ||| ||||||| ||||||||| ||||||| ||||||    
T  3565268 agagttgtgttatttgaacatccacttgagtgacaacttttgagacaaccaaaattttacaaagaaaatgaggtattga 3565190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 344
Target Start/End: Complemental strand, 33599152 - 33599027
Alignment:
Q  218 aatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaac 317  Q
    |||||| ||||||  ||||||||||  |||| ||| ||| || |||| |||| || | || ||||||||| ||| ||||||||||||| ||||| ||| |    
T  33599152 aatttatgagttgcattatttgaacaaccatttatatgataatttttatgacaactataaatttacaaagaaaaagagatattgacac-aaaattaaagc 33599054  T
Q  318 aatagagagagaaagtaaaaagataat 344  Q
    |||||||||| |||||||||| |||||    
T  33599053 aatagagagaaaaagtaaaaacataat 33599027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 21943637 - 21943702
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| ||||||||||| |||||||||| ||||| ||||||||| |||||| |||||    
T  21943637 tttacaaagaaaataagatattgacagaaaaatcaaagcaataaagagagaaaataaaaacataat 21943702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 39807655 - 39807720
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| || ||||||||||| | ||| |||| ||||||||| ||||||||||||    
T  39807655 tttacaaaggaaatgaggtactgacacaaaaaccgaaataataaagagagaaaataaaaagataat 39807720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 4719835 - 4719715
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||| ||||||||||||  |||  |||||||||||||||   ||  |||||| ||| ||||| |||  |  ||||| ||||||||||||| |||||||    
T  4719835 agagttatgttatttgaacaaccaattatgtgacaacttttagtacatccaaaattttgcaaagaaaagaaagtattggcacaaaaatcaaagcaataga 4719736  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||| |||||||||| |||||    
T  4719735 gagaaaaagtaaaaacataat 4719715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 35567653 - 35567565
Alignment:
Q  256 acaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||  || |||| || ||||||||  |||| || | ||||||||||| ||||| |||||||||||||||||||||| |||||    
T  35567653 acaacttttgacacaaccataattttacaaataaaataaggttttgacacaaaattcaaagcaatagagagagaaagtaaaaatataat 35567565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 37721054 - 37720987
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaaga 175  Q
    ||||||||||||| ||||||||||| ||| ||||| | | |||||| ||||| |||||||||||||||    
T  37721054 aagaagctaaaatggaatatattacgaaatcaatgagtcctttctaacacaaaatgtactaagaaaga 37720987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 1079889 - 1079959
Alignment:
Q  274 aaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||||| ||||||| ||||| |||||||  |||| ||||| ||| ||||||||||||||||||    
T  1079889 aaaattttacaaagaaaatgaggtattggcacaaaatccaaagcaatatagaaagaaagtaaaaagataat 1079959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 27488021 - 27487959
Alignment:
Q  274 aaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    |||| ||||||||| |||| | |||||| |||||||| |||| ||||||||||||||||||||    
T  27488021 aaaattttacaaagaaaattaaatattggcacaaaaaccaaagcaatagagagagaaagtaaa 27487959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 884547 - 884506
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  884547 cacaaaaatcaaaacaatagaaagagaaagtaaaaatataat 884506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 34546540 - 34546487
Alignment:
Q  284 aaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||| ||||||| |||||||| |||||||||| ||||||||| |||||||||||    
T  34546540 aaagaaaatgaggtattgacataaaaatcaaatcaatagagatagaaagtaaaa 34546487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 35649930 - 35649994
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||||| |||||||||||||||| | ||  |||||||||||||||||||||| |||||    
T  35649930 tttataaaggaaataagatattgacacaaaatt-aatgcaatagagagagaaagtaaaaacataat 35649994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 42643170 - 42643211
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  42643170 tattgacacaaaaaacaaatcaatagagagagaaagtaaaaa 42643211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 20270698 - 20270650
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  20270698 tttacaaagaaaatgaggtattgacacataaatcaaaacaataaagaga 20270650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 31683455 - 31683502
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||||||| | |||||||||||||| |||||    
T  31683455 tattgacacaaaaaccaaaacaataaaaagagaaagtaaaaacataat 31683502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 37597361 - 37597294
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaaga 175  Q
    |||||||||||||  |||||||||| ||| ||||| | | |||||| ||||| |||||||||||||||    
T  37597361 aagaagctaaaatgaaatatattacgaaatcaatgagtcatttctaacacaaaatgtactaagaaaga 37597294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 41699583 - 41699524
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| |||| |  ||||||||| |||||||||  |||||||||||||||||||||    
T  41699583 tttacaaagaaaattatgtattgacacgaaaatcaaattaatagagagagaaagtaaaaa 41699524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 6596460 - 6596397
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||| |||| ||||||||| |||| |||||||  ||||||||||||| |||||    
T  6596460 tttacaaagaaaatgaggtattaacacaaaaaccaaagcaataga--gagaaagtaaaaacataat 6596397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 8097363 - 8097329
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaa 331  Q
    ||||||||||||||||||| |||||||||||||||    
T  8097363 tattgacacaaaaatcaaagcaatagagagagaaa 8097329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 20770242 - 20770201
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  20770242 tattgacacgaaaatcaaagcaatagagagataaagtaaaaa 20770201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 29463107 - 29463066
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||    
T  29463107 tattggcacaaaaatcaaagcaatagagagagaaaataaaaa 29463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 31748442 - 31748401
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||    
T  31748442 cacaaaaatcaaagcaatagatagagaaagtgaaaagataat 31748401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 36563012 - 36563053
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||||| | || ||||||||||||||||||||||    
T  36563012 tattgacacaaaaacctaagcaatagagagagaaagtaaaaa 36563053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 611973 - 611929
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||| || |||||||||||| ||||| ||||||    
T  611973 tgacacaaaaatcaaagcagtagagagagaaaataaaatgataat 611929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 6940067 - 6940151
Alignment:
Q  255 gacaacttttgtgacgaccaaaactttacaaaggaaatg-agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||| | |||| |||| || ||||||||||||| | || | ||| ||| ||||||||| ||||||||||| ||||||||||    
T  6940067 gacaacttatttgacaaccataaatttacaaaggaaaagtaggttttggcacgaaaatcaaagcaatagagagataaagtaaaaa 6940151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 13089744 - 13089788
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||| ||||||||||| |||||| || ||||||    
T  13089744 tgacacaaaaatcaaagcaatagagagataaagtagaatgataat 13089788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 22649612 - 22649668
Alignment:
Q  288 gaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||| || |||||||||||  ||| |||||  |||||||||||||||||||||    
T  22649612 gaaatgaggtagtgacacaaaaactaaagcaatatggagagaaagtaaaaagataat 22649668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 107)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 27541388 - 27541509
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| ||||||    
T  27541388 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatag 27541487  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  27541488 agagagaaagtaaaaagataat 27541509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 42358529 - 42358645
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| |||||||||||||||||||||||||| | ||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  42358529 ttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtattgacacaaaaatcaaagcaatagagaga 42358628  T
Q  328 gaaagtaaaaagataat 344  Q
     ||||||||||||||||    
T  42358629 taaagtaaaaagataat 42358645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 16969454 - 16969573
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||| || || || ||||||||||||||||||     
T  16969454 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgaggtagtggcataaaaatcaaaacaatagaa 16969553  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  16969554 agagaaagtaaaaagataat 16969573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 38926813 - 38926692
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||| ||||||| |||||||||||||| || || ||||||||||| |||| ||||||    
T  38926813 aagagttgtgttatttgaacatctatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaataaggtagtgacacaaaaaccaaagcaatag 38926714  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  38926713 agagagaaagtaaaaagataat 38926692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 341
Target Start/End: Complemental strand, 52939835 - 52939718
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||||| || || |||||||| |||| |||||||    
T  52939835 agagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaataga 52939736  T
Q  324 gagagaaagtaaaaagat 341  Q
    ||||||||||||||||||    
T  52939735 gagagaaagtaaaaagat 52939718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 19149173 - 19149054
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| | ||||| ||||||||||||||||| || || |||||||| |||||||||| ||    
T  19149173 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgagttagtggcacaaaaaccaaaacaataaag 19149074  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  19149073 agagaaagtaaaaagataat 19149054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 35597344 - 35597226
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||  | |||||||||||||||||||||||| ||||||| ||||||||||||| ||| || ||||||||||| ||||||||||||||    
T  35597344 agttgtgttatttgaatattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaaccaaaacaatagaga 35597245  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  35597244 gagaaagtaaaaaaataat 35597226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 41309301 - 41309183
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| |||||||||| || |||||||||||| | ||||| ||||||||| ||||||| || |||||||||||||||| |||||||    
T  41309301 agagttgtgttatttgaacatccatatatgcgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaagcaataga 41309202  T
Q  324 gagagaaagtaaaaagata 342  Q
    |||||||||||||||||||    
T  41309201 gagagaaagtaaaaagata 41309183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 46624093 - 46623971
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||| | ||||| ||||||||| ||||||| || ||||||||||| ||||||||||    
T  46624093 taagagttgtgttatttgaacatccatacatgtgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaata 46623994  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    || ||||||||||||||||||||    
T  46623993 gaaagagaaagtaaaaagataat 46623971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 44856138 - 44856017
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||| ||||||||||||||||| || || |||||||||||||  |||||    
T  44856138 aagagttgtgttatttgaacatccatatatgtgacaacttgtatgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagaaatag 44856039  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| ||||    
T  44856038 agagagaaagtaaaaaggtaat 44856017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 52254025 - 52254141
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||| || |||| ||||||||||||||||| || ||||||||||| |||| |||||||    
T  52254025 agagttgtgtcatttgaacatccatatatgtgacaatttttgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaataga 52254124  T
Q  324 gagagaaagtaaaaaga 340  Q
    |||||||||||||||||    
T  52254125 gagagaaagtaaaaaga 52254141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 26014995 - 26014876
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||| ||| || ||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||  | |||||||| |||||||||||||    
T  26014995 gagttgtgttatttaaacatctatacatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaagggcacaaaaaccaaaacaatagag 26014896  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  26014895 agagaaagtaaaaagataat 26014876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 36670902 - 36671021
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||| |||||||| |||||||| || || |||||||| |||| ||||||||    
T  36670902 gagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaatgaaatgaggtagtggcacaaaaaccaaagcaatagag 36671001  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||| ||||||||||||||||    
T  36671002 agaaaaagtaaaaagataat 36671021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 47472512 - 47472393
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||| |||||||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||| || || ||||||||  ||||||| ||||    
T  47472512 gagttatgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaactaaaacaacagag 47472413  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  47472412 agagaaagtaaaaagataat 47472393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 221 - 344
Target Start/End: Complemental strand, 52326206 - 52326083
Alignment:
Q  221 ttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| |||| | ||||| ||||||||||||||||| ||    |||||||| |||||||||    
T  52326206 ttaagagttgtgttatttgaacatccatatatatgacaacttttatgacaatcaaaattttacaaaggaaatgaggtaagtgcacaaaaaccaaaacaat 52326107  T
Q  321 agagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||||    
T  52326106 agagagagaaagtaaaaagataat 52326083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 5114263 - 5114142
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || || |||||||||| |||| |||| | ||||| ||||||||| ||||||| || |||||||||||||||| ||||||    
T  5114263 aagagttgtgttatttgaacatctatttatgtgacaatttttatgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaagcaatag 5114164  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  5114163 agagagaaagtaaaaagataat 5114142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 37503635 - 37503748
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |  |||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| |||||||     
T  37503635 gagttgtgttatttgaacatttatatatgtgataacttttgtgacaaccaaaattttgcaaaggaaatgagatattgacacaaaaatcaaagcaatagaa 37503734  T
Q  325 agagaaagtaaaaa 338  Q
    | ||||||||||||    
T  37503735 aaagaaagtaaaaa 37503748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 225 - 341
Target Start/End: Original strand, 42356972 - 42357086
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||| || ||||||||||| |||| ||||||||    
T  42356972 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagag 42357071  T
Q  325 agagaaagtaaaaagat 341  Q
    ||||  |||||||||||    
T  42357072 agag--agtaaaaagat 42357086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 33939423 - 33939300
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| | | ||||||||||||  || ||||||||||| |||| ||||||    
T  33939423 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattattcaaaggaaatgaagtagtgacacaaaaaccaaagcaatag 33939324  T
Q  323 aga--gagaaagtaaaaagataat 344  Q
    |||  |||||||||||||||||||    
T  33939323 agagagagaaagtaaaaagataat 33939300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 288909 - 288790
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||  |||||||||||||||||| |||| || | ||||| |||||||| ||||||||||| ||||||||||| |||| ||||||||    
T  288909 gagttgtgttatttgaaaatccatatatgtgacaactattgtaacaatcaaaattttacaaaagaaatgagatagtgacacaaaaaccaaagcaatagag 288810  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  288809 agagaaagtaaaaaaataat 288790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 20547901 - 20547996
Alignment:
Q  248 tatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataa 343  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| || || ||||||||||||| |||||||||||||||||||||||||||    
T  20547901 tatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagataa 20547996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 338
Target Start/End: Original strand, 37056939 - 37057058
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||| | ||||||||| ||||||| ||||||||||||||  ||||||    
T  37056939 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaatattttacaaagaaaatgaggtattgacacaaaaacaaaaaca 37057038  T
Q  319 atagagagagaaagtaaaaa 338  Q
    ||||||||| ||||||||||    
T  37057039 atagagagataaagtaaaaa 37057058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 44413283 - 44413402
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| || ||||||||||||||||||||||| |  |||| ||||||||||||||||| ||||| |||||||| | || ||||| ||    
T  44413283 gagttgtgttatttgaacatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattggcacaaaaaccgaagcaataaag 44413382  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  44413383 agagaaagtaaaaagataat 44413402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 24256660 - 24256778
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||  || ||||||||||||||||||||||| |  |||| ||||||||||||||||| |||||| |||||||||||||||||| |||    
T  24256660 agttgtgttatttgaaaatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattgatacaaaaatcaaaacaataaaga 24256759  T
Q  326 gagaaagtaaaaagataat 344  Q
    |||||||||| ||| ||||    
T  24256760 gagaaagtaagaaggtaat 24256778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 35376966 - 35377088
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| ||||| ||  |||||||||||||||| ||||||| ||||||||| ||||||  ||||| ||||||||||||| |||||    
T  35376966 taagagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatgtattggcacaaaaatcaaagcaata 35377065  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||| |||||||||||| |||||    
T  35377066 gagaaagaaagtaaaaacataat 35377088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 32924169 - 32924265
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| |||| |||||    
T  32924169 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 32924265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 344
Target Start/End: Complemental strand, 5244408 - 5244293
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    |||||||||||||| |  ||||||||||||| ||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| ||||||||||||    
T  5244408 tgtgttatttgaacatttatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagag 5244309  T
Q  329 aaagtaaaaagataat 344  Q
    |||||||||| |||||    
T  5244308 aaagtaaaaaaataat 5244293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 7668074 - 7668194
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||| ||| | |||||||| ||||| || || ||||| |||| ||||||    
T  7668074 aagaattgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttgc-aaggaaataagatagtggcataaaaaccaaagcaatag 7668172  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  7668173 agagagaaagtaaaaagataat 7668194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 338
Target Start/End: Original strand, 13348015 - 13348135
Alignment:
Q  218 aatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaac 317  Q
    |||| ||||||| |||||||||||| ||||| ||| |||||||||||| ||| ||||||| ||||||||| ||||||| |||||| ||||||| |||| |    
T  13348015 aattaaagagttatgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgatacaaaaaccaaagc 13348114  T
Q  318 aatagagagagaaagtaaaaa 338  Q
    ||||||||||||| |||||||    
T  13348115 aatagagagagaaggtaaaaa 13348135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 7934157 - 7934039
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| || |||| ||||||||||| |||||||| ||||| ||||| |||| ||||| |     
T  7934157 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaactaaaattttacaaaggatatgagatagtgaca-aaaaaccaaagcaataaaa 7934059  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||| ||||||||    
T  7934058 agagaaagtaagaagataat 7934039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 31157563 - 31157684
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||| | ||||| |||||||||||||| || |||||  ||||||||||||||||||     
T  31157563 aagagttgtgttatttgaacatccatatatgtgataacttctgtgactatcaaaattttacaaaggaaattaggtattggtacaaaaatcaaaacaataa 31157662  T
Q  323 agagagaaagtaaaaagataat 344  Q
     |||  ||| ||||||||||||    
T  31157663 ggaggaaaaataaaaagataat 31157684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 37302731 - 37302610
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||||| |||||||||| |||||| || |||||||||||||||| | ||||| ||| ||||||||||||| || || |||||||| ||||  |||||    
T  37302731 aagagttgtcttatttgaacatccatacatttgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtggcacaaaaaccaaagtaatag 37302632  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| ||||    
T  37302631 agagagaaagtaaaaaggtaat 37302610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 337
Target Start/End: Original strand, 55151604 - 55151717
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| |  |||||||||||||||||||| || |  |||| ||||||||||||||||  |||||||||||||| |||| || ||||    
T  55151604 agagttgtgttatttgaacatttatatatgtgacaacttttgttacaattaaaattttacaaaggaaatgaagtattgacacaaaaaccaaagcactaga 55151703  T
Q  324 gagagaaagtaaaa 337  Q
    ||||||||||||||    
T  55151704 gagagaaagtaaaa 55151717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 45711355 - 45711446
Alignment:
Q  253 gtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||| || ||||||| ||||||||| ||||||  ||||||||||| || |||||||||||||||||||||||||||||||||    
T  45711355 gtgacaacttttgtaacaaccaaaattttacaaagaaaatgaagtattgacacaataaccaaaacaatagagagagaaagtaaaaagataat 45711446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 10829270 - 10829165
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaagacactgcaagatccgggcaatatttacaaggaa 207  Q
    ||||| |||||||  ||||||||| ||| ||||||||||||| |||| |||||  ||||||||||||||||| |||||||||  ||||||||||||||||    
T  10829270 aagaaactaaaatgaaatatattaacaacacaatgtgactttcctagtacaaggcgtactaagaaagacactccaagatccgaacaatatttacaaggaa 10829171  T
Q  208 actata 213  Q
    ||||||    
T  10829170 actata 10829165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 228 - 344
Target Start/End: Complemental strand, 8847289 - 8847174
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| ||||||||||| |||||||||||||  | ||||| ||||||||  ||||||| ||||| |||||||| |||||||||||| |||    
T  8847289 ttgtgttatttgaacatccatatatgt-acaacttttgtgataatcaaaattttacaaataaaatgaggtattggcacaaaaaccaaaacaatagaaaga 8847191  T
Q  328 gaaagtaaaaagataat 344  Q
     |||||||||| |||||    
T  8847190 aaaagtaaaaaaataat 8847174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 41505635 - 41505555
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| ||||||| ||||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||    
T  41505635 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataat 41505555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 21217701 - 21217610
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaa 310  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  21217701 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 21217610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 13735913 - 13735843
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgag 295  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  13735913 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttgcaaaggaaatgag 13735843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 311
Target Start/End: Complemental strand, 44383378 - 44383286
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaat 311  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| | ||||| |||| |||| ||||||| |||||||||||||||    
T  44383378 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaat 44383286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 329
Target Start/End: Complemental strand, 44813323 - 44813215
Alignment:
Q  221 ttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||| | | ||||| |||||||||||||| || || || |||||||| | || ||||    
T  44813323 ttaagagttgtgtgatttgaacatctatatatgtgacaacttttgtggcaatcaaaattttacaaaggaaattaggtagtggcacaaaaacccaagcaat 44813224  T
Q  321 agagagaga 329  Q
    |||||||||    
T  44813223 agagagaga 44813215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 221 - 344
Target Start/End: Complemental strand, 51982286 - 51982163
Alignment:
Q  221 ttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    |||||||||||||||||||||  ||||| ||| | |||| ||||| ||| || |||| |||| |||| |||| || ||||||||||||||  ||| ||||    
T  51982286 ttaagagttgtgttatttgaaaatccatttatataacaatttttgagacaactaaaattttataaagaaaataaggtattgacacaaaaactaaagcaat 51982187  T
Q  321 agagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||| |||||    
T  51982186 agagagagaaagtaaaaacataat 51982163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 28539629 - 28539747
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| ||||| ||  ||| |||||||||||  ||||||| ||| ||||| ||||||  | ||| ||||||| ||||| |||||||||    
T  28539629 agttgtgttatttgaacatccatttagatgataacttttgtgataaccaaaattttgcaaagaaaatgatgttttggcacaaaagtcaaagcaatagaga 28539728  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  28539729 gagaaagtaaaaacataat 28539747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 338
Target Start/End: Complemental strand, 23592640 - 23592534
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||      |||||||||||||    
T  23592640 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacaca------aaaacaatagaga 23592547  T
Q  326 gagaaagtaaaaa 338  Q
    |||||| ||||||    
T  23592546 gagaaaataaaaa 23592534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 45000200 - 45000127
Alignment:
Q  271 accaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| ||||||||||||||||| || || |||||||| |||| ||||||||||||||||||||||||||||    
T  45000200 accaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaatcaatagagagagaaagtaaaaagataat 45000127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 35201323 - 35201427
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| ||||| ||  |||||||||||| ||| |  |||| | ||||||| |||| ||||||||||||||||| |||||||||||| |    
T  35201323 agttgtgttatttgaacatccatttaaatgacaacttttgagacaattaaaattatacaaagaaaataagatattgacacaaaaaccaaaacaatagaaa 35201422  T
Q  326 gagaa 330  Q
    |||||    
T  35201423 gagaa 35201427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 344
Target Start/End: Original strand, 33791699 - 33791777
Alignment:
Q  266 tgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||| || |||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  33791699 tgacaaccaaaatttcacaaagaaaatgaggtattgacacaaaagtcaaaacaatagagagggaaagtaaaaacataat 33791777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 44445479 - 44445389
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatca 313  Q
    ||||||| |||||||||||| || |||||||| ||||||||| |||| ||||||| |||| |||| ||||||||||||  |||||||||||    
T  44445479 aagagttatgttatttgaacatcgatatatgtaacaacttttatgacaaccaaaattttataaagaaaatgagatatttgcacaaaaatca 44445389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 6178311 - 6178432
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||||||||||||||||  |||| | | |||||||||| |  || |||| || |||  |||| ||| | | ||||||||||||||||||| ||||||    
T  6178311 aagagttgtgttatttgaacaaccatttttatgacaactttcgatacaaccataaatttgtaaagaaaaagtggtattgacacaaaaatcaaagcaatag 6178410  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  6178411 agagagaaagtaaaaacataat 6178432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 338
Target Start/End: Original strand, 23770631 - 23770746
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||| ||||||||||||||  |||| |  ||||||||||||||||| ||||  | |||| ||||||||  ||||||||||||  ||| ||||  |||||    
T  23770631 aagagatgtgttatttgaacaaccatttgagtgacaacttttgtgacaaccactaatttataaaggaaagtagatattgacacggaaaccaaagtaatag 23770730  T
Q  323 agagagaaagtaaaaa 338  Q
    ||||||||||||||||    
T  23770731 agagagaaagtaaaaa 23770746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 343
Target Start/End: Original strand, 46965976 - 46966106
Alignment:
Q  213 acaaaaatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatc 312  Q
    ||||||| | ||||| ||||||||||||||  |||| | |||||||||||||  ||| | || || ||||||||| ||   |||||| ||||| |||| |    
T  46965976 acaaaaactaaagaggtgtgttatttgaacaaccatttgtgtgacaacttttcggacaatcataaatttacaaagaaagatagatatcgacacgaaaacc 46966075  T
Q  313 aaaacaatagagagagaaagtaaaaagataa 343  Q
    ||||||||||| |||||||||||||| ||||    
T  46966076 aaaacaatagatagagaaagtaaaaacataa 46966106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 44413849 - 44413927
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| | ||||| ||||||||| |||||||||||||||||||||| |||| ||||  |||||||| |||||||||||||    
T  44413849 tgtgacaatcaaaattttacaaagaaaatgagatattgacacaaaaaccaaagcaat--agagagaaggtaaaaagataat 44413927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 55361175 - 55361240
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||  |||||||||||||| |||| |||||||||||||||||||||| |||||    
T  55361175 tttacaaagaaaatgaagtattgacacaaaaaccaaagcaatagagagagaaagtaaaaaaataat 55361240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 39629729 - 39629845
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    |||||||||||||||   ||  |||||||||||||||   |  ||||||| |||| |||| |||  |  |||||||| ||||||||||||||||||||||    
T  39629729 ttgtgttatttgaacaatcaattatgtgacaacttttagtataaccaaaattttataaagaaaagaaattattgacataaaaatcaaaacaatagagaga 39629828  T
Q  328 gaaagtaaaaagataat 344  Q
    ||||||||||| |||||    
T  39629829 gaaagtaaaaacataat 39629845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 23600782 - 23600707
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatga 294  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||    
T  23600782 atttaaaagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatga 23600707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 344
Target Start/End: Complemental strand, 44463544 - 44463421
Alignment:
Q  221 ttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    ||||| |||||||||||||||| || |  ||| ||| |||||||| ||  | ||||| ||||||||| ||||| |||||||| ||||||||||||  ||     
T  44463544 ttaagtgttgtgttatttgaacatcaaattatatgataacttttgagataatcaaaattttacaaagaaaatgtgatattgatacaaaaatcaaagtaac 44463445  T
Q  321 agagagagaaagtaaaaagataat 344  Q
    ||| ||||||| |||||| |||||    
T  44463444 agaaagagaaaataaaaatataat 44463421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 19150281 - 19150319
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19150281 ttgacacaaaaatcaaaacaatagagagagaaagtaaaa 19150319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 27511903 - 27511790
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    ||||||||||||||  | || | |||||||||||||| ||| |||| || ||||||||| |||  ||||||||||||  ||| ||||||||||||||| |    
T  27511903 tgtgttatttgaacaacaatttgtgtgacaacttttg-gacaaccataaatttacaaagaaaagtagatattgacacggaaaccaaaacaatagagagtg 27511805  T
Q  329 aaagtaaaaagataa 343  Q
    ||||| |||| ||||    
T  27511804 aaagtgaaaacataa 27511790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 50559101 - 50559218
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||||||||||  | || ||||||| || |||| |||| |||| || |||| |||| |||  || |||||  | ||||||||||||||||||||    
T  50559101 agttgtgttatttgaacaactatttatgtgataatttttatgacaaccataaatttataaagaaaaa-aggtattggtataaaaatcaaaacaatagaga 50559199  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  50559200 gagaaagtaaaaacataat 50559218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 14226593 - 14226694
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||||||||   ||  ||||| |||| ||||  ||| | ||||| ||||||||| |||||| ||||||||||||||| |||||||| ||||    
T  14226593 gagttgtgttatttgaacaatcaattatgtaacaatttttaagacaatcaaaattttacaaagaaaatgaaatattgacacaaaaaccaaaacaacagag 14226692  T
Q  325 ag 326  Q
    ||    
T  14226693 ag 14226694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 42889168 - 42889055
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||| ||| || || ||  ||||||||||||  |  ||||||| ||||||||| ||||||| ||||| |||||||| |||| ||| ||||    
T  42889168 gagttgtgttatttaaacatctatttagatgacaacttttgatataaccaaaattttacaaagaaaatgagttattggcacaaaaaccaaagcaacagag 42889069  T
Q  325 agagaaagtaaaaa 338  Q
    |||  |||||||||    
T  42889068 agaataagtaaaaa 42889055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 9692834 - 9692790
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||    
T  9692834 tgacacaaaaatcaaagcaatagagagagaaagtaaaatgataat 9692790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 50314741 - 50314689
Alignment:
Q  292 tgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||| |||||    
T  50314741 tgaggtattgacacaaaaatcaaagtaatagagagagaaagtaaaaacataat 50314689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 310
Target Start/End: Original strand, 25641469 - 25641556
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaa 310  Q
    ||||||||| |||||||||| ||||| ||| |||||||||||| ||| ||||||  |||||| || |||| || ||||| ||||||||    
T  25641469 aagagttgtattatttgaacatccatttatatgacaacttttgagacaaccaaagttttacatagaaaataaggtattggcacaaaaa 25641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 32145927 - 32145982
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    ||||||||| || | || || |||||||||||||||||||||||||||||||||||    
T  32145927 tttacaaagaaatttaggtagtgacacaaaaatcaaaacaatagagagagaaagta 32145982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 34456902 - 34456855
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  34456902 tattggcacaaaaattaaagcaatagagagagaaagtaaaaagataat 34456855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 42997464 - 42997353
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    |||||||||| ||| | ||| ||| |||||||||||  ||| ||||||| | || |||| |||| ||||||| ||| ||| | |||||||||| |||||     
T  42997464 tgtgttatttaaacattcatttatatgacaacttttaagacaaccaaaattgtataaagaaaataagatattaacaaaaagaccaaaacaataaagagat 42997365  T
Q  329 aaagtaaaaaga 340  Q
    ||||||||||||    
T  42997364 aaagtaaaaaga 42997353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 536192 - 536282
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| |||||||| ||||  | |||||||||||||  ||||| |||| |  ||| |||| |||||||||||||||||||||| |||||    
T  536192 tgacaacgtttgtgacaaccactaatttacaaaggaaagtagataatgacgcggaaaccaaagcaatagagagagaaagtaaaaaaataat 536282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 31104773 - 31104739
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    |||||||||||||||||||||||||||||||||||    
T  31104773 tgacacaaaaatcaaaacaatagagagagaaagta 31104739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 344
Target Start/End: Original strand, 39338692 - 39338734
Alignment:
Q  302 acacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  39338692 acacaaaaatcaaaacaatagagagaaaaagtaaaaatataat 39338734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 41443156 - 41443190
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||||||||||||||||||||||||||||    
T  41443156 cacaaaaatcaaaacaatagagagagaaagtaaaa 41443190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 48346939 - 48346897
Alignment:
Q  296 atattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  48346939 atattgacacaaaaaccaaagcaatagagagagaaagtaaaaa 48346897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 34627823 - 34627888
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| ||||||| | |||||||||||| || || |||||||||||||||| |||||    
T  34627823 tttacaaagaaaataagatatttatacaaaaatcaaagcagtaaagagagaaagtaaaaatataat 34627888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 50318316 - 50318390
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| ||||||| |||||||||||||||||||| || ||||||| |      |||||||||| ||||||||||||||||    
T  50318316 tgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaagt------aatagagagaaaaagtaaaaagataat 50318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 50876304 - 50876369
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||| ||| |||||| |||||||||||| ||||||| ||||||| |||||| |||||    
T  50876304 tttacaaagaaaaagaggtattgatacaaaaatcaaagcaatagaaagagaaaataaaaacataat 50876369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 52714839 - 52714798
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  52714839 cacaaaaatcaaagcaatagagagagaaagtaaaaatataat 52714798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 16129659 - 16129587
Alignment:
Q  271 accaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataa 343  Q
    ||||||| |||||| |||||||||| ||| | || |||||||||||||| | ||| |||||| ||||||||||    
T  16129659 accaaaattttacagaggaaatgaggtatcggcataaaaatcaaaacaacaaagacagaaaggaaaaagataa 16129587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 35299816 - 35299864
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    |||| |||| ||||||| ||||||||||||||||||| |||||||||||    
T  35299816 tttataaagaaaatgaggtattgacacaaaaatcaaagcaatagagaga 35299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 39771159 - 39771115
Alignment:
Q  115 taaaatagaatatattaccaaaacaatgtgacttttctagcacaa 159  Q
    |||||||||||||||||||||||||||||| | || |||||||||    
T  39771159 taaaatagaatatattaccaaaacaatgtgtcattcctagcacaa 39771115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 48353101 - 48353061
Alignment:
Q  304 acaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  48353101 acaaaaatcaaagcaatagagagagaaagtaaaaatataat 48353061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 6093838 - 6093885
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||| ||| |||| ||||||||||||||||||||||||||||    
T  6093838 tattaacacagaaaccaaagcaatagagagagaaagtaaaaagataat 6093885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 9311152 - 9311105
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| |||||    
T  9311152 tattgacacgaaaaccaaaacaatagggagagaaagtaaaaacataat 9311105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 19960551 - 19960639
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| ||| | || || ||||| ||| |||  |||||||||||||||   |||||||||||||||| |||||||||| |||||    
T  19960551 tgacaacttttgagacaaacataattttacgaagaaaagaagatattgacacaaac--caaaacaatagagagaaaaagtaaaaacataat 19960639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 28700572 - 28700525
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| |||||||| |||| |||||||||||||||||||||| |||||    
T  28700572 tattggcacaaaaaccaaagcaatagagagagaaagtaaaaacataat 28700525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Complemental strand, 41505662 - 41505627
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaac 260  Q
    |||||||||||||||||| |||||||||||||||||    
T  41505662 gagttgtgttatttgaacatccatatatgtgacaac 41505627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 325
Target Start/End: Complemental strand, 54007640 - 54007545
Alignment:
Q  230 gtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||||||| |||| | | ||||||||| |  ||| |||| || |||| |||| |||  |||||||||||||||||| |||| ||||||||    
T  54007640 gtgttatttgaacgaccatctgtatgacaacttataagacaaccataaatttataaagaaaaatagatattgacacaaaaataaaaagaatagaga 54007545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 344
Target Start/End: Original strand, 37035446 - 37035532
Alignment:
Q  258 aacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| ||||  | |||||||||||||  ||||| ||||||  ||| ||||  |||||||||| |||||||||| |||||    
T  37035446 aacttttgtgacaaccactaatttacaaaggaaagtagatagtgacacggaaaccaaagtaatagagagataaagtaaaaaaataat 37035532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 54099325 - 54099363
Alignment:
Q  306 aaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  54099325 aaaaatcaaagcaatagagagagaaagtaaaaatataat 54099363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 1436922 - 1436881
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||  |||||||||||||||||||||||||| |||||    
T  1436922 cacaaaaaataaaacaatagagagagaaagtaaaaatataat 1436881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 4494199 - 4494236
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  4494199 tgacacaaaaatcaaagcaatagaaagagaaagtaaaa 4494236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 12762581 - 12762690
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    ||||||||||||||   ||| ||  |||||| || || ||| |||| || ||||||||| |||  || |||||||||||||||||||  |||| ||||||    
T  12762581 tgtgttatttgaacaatcatttacatgacaatttatgggacaaccataaatttacaaagaaaaatagttattgacacaaaaatcaaagtaataaagagag 12762680  T
Q  329 aaagtaaaaa 338  Q
    ||| ||||||    
T  12762681 aaaataaaaa 12762690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 22237258 - 22237217
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||||||  |||| |||||||||||||||||||||    
T  22237258 tattgacacaaaaactaaaataatagagagagaaagtaaaaa 22237217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 26452664 - 26452729
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| |  ||||||||   |||||||| |||||||||||||||||||||| |||||    
T  26452664 tttacaaagaaaatcatgtattgacagggaaatcaaagcaatagagagagaaagtaaaaatataat 26452729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 26772480 - 26772439
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| |||||||||| |||||||||||||| ||||||    
T  26772480 tattgacacgaaaatcaaaataatagagagagaaaataaaaa 26772439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 36756016 - 36756057
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| ||||||||||||||| |||||| |||||    
T  36756016 cacaaaaatcaaagcaatagagagagaaaataaaaatataat 36756057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 37894201 - 37894242
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  37894201 tattgacacaaatatcaaagtaatagagagagaaagtaaaaa 37894242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 42478144 - 42478088
Alignment:
Q  223 aagagttgtgttatttgaacgtcc--atatatgtgacaacttttgtgacgaccaaaa 277  Q
    |||||||||||||||||||| |||  |||||| ||| |||||||||||| |||||||    
T  42478144 aagagttgtgttatttgaacatccatatatatatgataacttttgtgacaaccaaaa 42478088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 42672776 - 42672841
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| |||| |||||||||||||  | | ||| ||||||||| ||||||||||||||||| |||||    
T  42672776 tttaaaaagaaaatgagatattggtatataaaacaaaacaatggagagagaaagtaaaaacataat 42672841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 49087041 - 49087090
Alignment:
Q  271 accaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    ||||||| ||| ||||| ||||||| |||||||||||||| |||||||||    
T  49087041 accaaaatttttcaaagaaaatgaggtattgacacaaaaaccaaaacaat 49087090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 325
Target Start/End: Complemental strand, 3648689 - 3648661
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||||||||||||||||||||||    
T  3648689 tattgacacaaaaatcaaaacaatagaga 3648661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 344
Target Start/End: Original strand, 11630642 - 11630755
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    |||||||||||||| | ||| ||| |||||| ||||| ||| |  |||| ||||||||| ||||||  |||||| | ||||| ||||  |||  ||||||    
T  11630642 tgtgttatttgaacattcatttatatgacaatttttgagacaattaaaattttacaaagaaaatgaagtattgatataaaaaccaaagtaat--agagag 11630739  T
Q  329 aaagtaaaaagataat 344  Q
    |||||||||| |||||    
T  11630740 aaagtaaaaatataat 11630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 13735237 - 13735193
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||| |||| ||||||||| ||||| ||||||||||||    
T  13735237 tgacacaaaaaccaaagcaatagagaaagaaaataaaaagataat 13735193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 29525978 - 29525942
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaa 330  Q
    ||||| || ||||||||||||||||||||||||||||    
T  29525978 agatagtggcacaaaaatcaaaacaatagagagagaa 29525942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 32322108 - 32322064
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagat 341  Q
    |||||| | |||||||||| ||||||| |||||||||||||||||    
T  32322108 tattgatataaaaatcaaagcaatagaaagagaaagtaaaaagat 32322064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 32587739 - 32587787
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||| |||||| |||||| |||||||| |||| |||||||||||    
T  32587739 tttacaaagaaaatgaaatattggcacaaaaaccaaagcaatagagaga 32587787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 39671055 - 39671099
Alignment:
Q  295 gatattgacacaaaaatcaaaacaatagagagagaaagtaaaaag 339  Q
    |||||||||||  |||||| ||||||||||||| |||||||||||    
T  39671055 gatattgacacggaaatcataacaatagagagataaagtaaaaag 39671099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 39714001 - 39714033
Alignment:
Q  302 acacaaaaatcaaaacaatagagagagaaagta 334  Q
    |||||||||||||| ||||||||||||||||||    
T  39714001 acacaaaaatcaaagcaatagagagagaaagta 39714033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 38956506 - 38956625
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| ||||||||    
T  38956506 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaacaaagcaatagag 38956605  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  38956606 agagaaagtaaaaagataat 38956625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 225 - 343
Target Start/End: Original strand, 44895460 - 44895578
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| ||||||||    
T  44895460 gagttatgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagag 44895559  T
Q  325 agagaaagtaaaaagataa 343  Q
    |||||||||||||||||||    
T  44895560 agagaaagtaaaaagataa 44895578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 43025524 - 43025404
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||||||||| |||| || |||||||||||||||||||| || || |||| |||||||||||||||||||| || |||||||| |||| |||||||    
T  43025524 agagttgtgttattcgaacatctatatatgtgacaacttttgtaacaactaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagcaataga 43025425  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||| ||||||||||||||||    
T  43025424 gagaaaaagtaaaaagataat 43025404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 40112841 - 40112961
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| ||||||||||| ||||||| | |||| | ||||| |||||||||||||| || || || |||||||| |||| |||||||    
T  40112841 agagttgtgttatttgaacatccatatatgtaacaacttctctgacaatcaaaattttacaaaggaaataaggtagtggcacaaaaaccaaagcaataga 40112940  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||    
T  40112941 gagagaaagtaaaaagataat 40112961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 41189428 - 41189550
Alignment:
Q  224 agagttgtgttatttgaacgtccatatat--gtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||| | |||||||  |||| ||||||| |||| | ||||| ||||||||||||||||| ||||||||||||||  ||| |||||    
T  41189428 agagttgtgttatttgaacattcatatatatgtgataacttttatgacaatcaaaattttacaaaggaaatgaggtattgacacaaaaactaaagcaata 41189527  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||    
T  41189528 gagagagaaagtaaaaagataat 41189550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 3937009 - 3937128
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| |||| |||||||||||| ||||| |||||||| ||||  |||      
T  3937009 aagagttgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagtaat-- 3937106  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||| ||||||||||||||||    
T  3937107 agagataaagtaaaaagataat 3937128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 22918057 - 22918174
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||| |||||||| | |||||| ||||||||||||||| ||| | ||||| ||||||||||||||||| || || |||||||| |||| ||||||||    
T  22918057 gagttgtattatttgagcatccatacatgtgacaacttttgcgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagag 22918156  T
Q  325 agagaaagtaaaaagata 342  Q
    ||||||||||||||||||    
T  22918157 agagaaagtaaaaagata 22918174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 24614203 - 24614323
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||  | ||||| ||||||||||||||||| || ||||||||||| |||| |||||||    
T  24614203 agagttgtgttatttgaacattcatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaataga 24614302  T
Q  324 gagagaaagtaaaaagataat 344  Q
    | |||||| ||||| ||||||    
T  24614303 gtgagaaaataaaatgataat 24614323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 224 - 338
Target Start/End: Original strand, 35072249 - 35072363
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||| ||||| ||||| ||| ||||||||||||  || ||||||| |||| |||| |||||||| |||||||||||||||||| |||||||    
T  35072249 agagttgtgttatctgaacatccatttatatgacaacttttgaaacaaccaaaattttataaagaaaatgagacattgacacaaaaatcaaagcaataga 35072348  T
Q  324 gagagaaagtaaaaa 338  Q
     ||||||||||||||    
T  35072349 aagagaaagtaaaaa 35072363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 25192803 - 25192907
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||| || |||| ||||||||| ||||||| || ||||||||||| |||||||||||    
T  25192803 aagagttgtgttatttgaatattcatacatgtgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaatag 25192902  T
Q  323 agaga 327  Q
    |||||    
T  25192903 agaga 25192907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 46578023 - 46578142
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||| |||||||||| ||||||||||||| || || | |||| ||||||| |||| ||| |||| ||| ||||| ||||||||||||| ||||||||    
T  46578023 gagttgtcttatttgaacatccatatatgtgataatttctatgacaaccaaaattttataaaagaaacgaggtattggcacaaaaatcaaatcaatagag 46578122  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||| ||||||    
T  46578123 agagaaagtaaaatgataat 46578142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 338
Target Start/End: Original strand, 35098590 - 35098704
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||  || ||||||| |||| | || |||||||| |||||||||||||||||| |||||||    
T  35098590 agagttgtgttatttgaatatccatttatatgacaacttttgaaacaaccaaaattttatatagaaaatgagacattgacacaaaaatcaaagcaataga 35098689  T
Q  324 gagagaaagtaaaaa 338  Q
     ||||||||||||||    
T  35098690 aagagaaagtaaaaa 35098704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 41989628 - 41989749
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttac--aaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||| |||||  |||  ||||||| || || |||||||| |||| |||||     
T  41989628 gagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaaaaaaaaatgaggtagtggcacaaaaaccaaagcaataa 41989727  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  41989728 agagagaaagtaaaaatataat 41989749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 43942817 - 43942701
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||||||||||| || ||||||| | ||||||| ||||||||| |||||||     |  ||||||| |||| ||||||    
T  43942817 aagagttgtgttatttgaacatccatatatgtgataatttttgtggcaaccaaaattttacaaagaaaatgag-----gtgacaaaaaccaaagcaatag 43942723  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  43942722 agagagaaagtaaaaagataat 43942701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 48062242 - 48062121
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||| | |  |||| || ||||| ||| | ||||| |||| |||| ||||||| |||||||||||||| |||||||||||    
T  48062242 aagagttgtgttatttgaacatccgtttgagtgataatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaaccaaaacaatag 48062143  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  48062142 agagagaaagtaaaaacataat 48062121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 40417957 - 40417838
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| || || |||  ||||||||||| ||| ||||||| ||||||||| || |||| |||||||| ||||| |||| ||||||||    
T  40417957 gagttgtgttatttgaacatctatttatacgacaacttttgagacaaccaaaattttacaaagaaagtgaggtattgacataaaaaccaaagcaatagag 40417858  T
Q  325 agagaaagtaaaaagataat 344  Q
    | |||||||||||| |||||    
T  40417857 aaagaaagtaaaaacataat 40417838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 46022149 - 46022240
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaa 310  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  46022149 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 46022240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 250 - 344
Target Start/End: Original strand, 44189223 - 44189317
Alignment:
Q  250 tatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| |||||||||||| | ||||| ||| ||||||||||||| || ||||||||||| ||||  |||||||||||||||||||||||||||    
T  44189223 tatgtgataacttttgtgacaatcaaaaattttcaaaggaaatgagttagtgacacaaaaaccaaagtaatagagagagaaagtaaaaagataat 44189317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 221 - 341
Target Start/End: Original strand, 32529740 - 32529858
Alignment:
Q  221 ttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    |||| ||||||||||||||| | |||||||||||||||| ||||||||| | ||||| ||||||||||||||||| || ||| | ||||| |||| ||||    
T  32529740 ttaaaagttgtgttatttgagcatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgaggtagtgataaaaaaaccaaagcaat 32529839  T
Q  321 agagagagaaagtaaaaagat 341  Q
      | |||||||||||||||||    
T  32529840 --aaagagaaagtaaaaagat 32529858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 31445502 - 31445382
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| ||  | ||| ||| || |||||  || | ||||| ||||||||| |||||||  |||||||||||||||||| |||||||    
T  31445502 agagttgtgttatttgaacatcattttatatgataatttttgcaacaatcaaaattttacaaagaaaatgagtgattgacacaaaaatcaaagcaataga 31445403  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||    
T  31445402 gagagaaagtaaaaatataat 31445382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 7701733 - 7701642
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaa 310  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||  |||| |||| ||||||| ||||||||||||||    
T  7701733 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaagttttataaagaaaatgaggtattgacacaaaaa 7701642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 45851095 - 45851204
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| ||||||| ||| |||| |||| |||| || |||| ||||||||||||||||   | ||||||||||| |||| ||||||||    
T  45851095 gagttgtgttatttgaacatccatatctgtcacaatttttttgacaactaaaattttacaaaggaaatga---agtgacacaaaaaccaaagcaatagag 45851191  T
Q  325 agagaaagtaaaa 337  Q
    | |||||||||||    
T  45851192 aaagaaagtaaaa 45851204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 338
Target Start/End: Original strand, 47391214 - 47391326
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||| |||||| | ||||||||| | |||||||  ||| | ||| | |||| ||||||||||| |||||||||||||||||||||||||| |||    
T  47391214 agttgtgttagttgaacattcatatatgtaataacttttaagacaatcaatattttataaaggaaatgaaatattgacacaaaaatcaaaacaataaaga 47391313  T
Q  326 gagaaagtaaaaa 338  Q
    || |||| |||||    
T  47391314 gaaaaaggaaaaa 47391326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 43159463 - 43159581
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||||||||  |||| || |||||||||||  |||| |||| || ||||||||| ||| ||| |||||| || |||| |||| ||||||||    
T  43159463 gagttgtgttatttgaacaaccatttaggtgacaactttgatgacaaccataaatttacaaagaaaaagaggtattgatac-aaaaccaaagcaatagag 43159561  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  43159562 agagaaagtaaaaatataat 43159581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 38861240 - 38861160
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| | ||||| ||||||||| |||| || || || |||||||| |||||||||||||||||||||||||||||||||    
T  38861240 tgtgacaatcaaaattttacaaagtaaataaggtagtggcacaaaaaccaaaacaatagagagagaaagtaaaaagataat 38861160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 41018848 - 41018728
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||   | || || |||||||||||| |||| | || || ||||||||| ||| ||| |||| ||||||||| ||||  ||||||    
T  41018848 agagttgtgttatttgaataactatttaggtgacaacttttatgacaatcataaatttacaaagaaaaagaggtattaacacaaaaaccaaagtaataga 41018749  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||    
T  41018748 gagagaaagtaaaaatataat 41018728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 22817093 - 22817003
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||  ||||  | |||||||||||||  ||||| ||||||  ||| ||||||||||||||||||||||||||| |||||    
T  22817093 tgacaacttttgtgataaccactaatttacaaaggaaagtagatagtgacacggaaaccaaaacaatagagagagaaagtaaaaaaataat 22817003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 38073364 - 38073299
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagaga 329  Q
    |||||| ||||||| ||||||||||||||||| ||||| |||||||| |||| |||||||||||||    
T  38073364 tgtgacaaccaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaatagagagaga 38073299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 27568129 - 27568082
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  27568129 tattgacacaaaaaccaaaacaatagagagagaaagtaaaaacataat 27568082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 33578202 - 33578321
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||||||||||||||| |||  | ||| ||||||| ||||  || || |||| ||||||||| |||||||  ||||| ||||||| ||||| |||      
T  33578202 aagagttgtgttatttgaatgtcattttatatgacaacctttgcaacaactaaaattttacaaagaaaatgagtgattgatacaaaaaccaaaataat-- 33578299  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  33578300 agagagaaagtaaaaatataat 33578321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 4292557 - 4292492
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| | ||||||  |||||||||||| |||||||||||||||||||||| |||||    
T  4292557 tttacaaagaaaattaaatattggtacaaaaatcaaagcaatagagagagaaagtaaaaacataat 4292492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 36352526 - 36352591
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| | |||||||||| ||||||||| ||||||||||| |||||||||| |||||    
T  36352526 tttacaaagaaaatcatatattgacacgaaaatcaaagcaatagagagataaagtaaaaatataat 36352591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 45420026 - 45420067
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  45420026 cacaaaaatcaaaacaatagagagagaaagtaaaatgataat 45420067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 46095137 - 46095015
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatg---agatattgacacaaaaatcaaaacaat 320  Q
    ||||||||||||||||||  || || ||| ||||||| |||| ||| | ||||| | ||||||| ||||    ||||||||||||||||| ||| |||||    
T  46095137 agagttgtgttatttgaatatctatttatatgacaacctttgagacaatcaaaa-tatacaaagaaaatagtaagatattgacacaaaaaccaatacaat 46095039  T
Q  321 agagagagaaagtaaaaagataat 344  Q
    ||||||||||| |||||| |||||    
T  46095038 agagagagaaaataaaaatataat 46095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 3683656 - 3683596
Alignment:
Q  284 aaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| |||| || ||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  3683656 aaagaaaataagttattgacacaaaaattaaaacaatagagagagaaaataaaaatataat 3683596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 337
Target Start/End: Complemental strand, 17945222 - 17945139
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||||||||| ||||  | |||| ||||||||  ||||| ||||||  ||| |||| |||||||||||||||||||||    
T  17945222 tgacaacttttgtgacaaccactaatttataaaggaaagtagatagtgacaccgaaaccaaagcaatagagagagaaagtaaaa 17945139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 18505885 - 18505838
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||    
T  18505885 tattgatacaaaaatcaaaacaatagagagagaaactaaaaacataat 18505838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 34507165 - 34507212
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  34507165 tattgacacgaaaatcaaagcaatagagagagaaagtaaaaatataat 34507212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 344
Target Start/End: Complemental strand, 35600851 - 35600736
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    ||||||||||||||  |||| |  ||||||||||||||||| ||||  | ||||||||| |||  ||||| ||||||  ||| ||||  ||||||||||     
T  35600851 tgtgttatttgaacaaccatttgagtgacaacttttgtgacaaccactaatttacaaagaaaagtagatagtgacacggaaaccaaagtaatagagagaa 35600752  T
Q  329 aaagtaaaaagataat 344  Q
    |||||||||| |||||    
T  35600751 aaagtaaaaaaataat 35600736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 35822934 - 35822981
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  35822934 tattggcacaaaaatcaaagcaatagagagagaaagtaaaaatataat 35822981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 41529643 - 41529576
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaaga 175  Q
    ||||||||||||| ||||||||||| ||| ||||| | | || |||||||||| ||||||||||||||    
T  41529643 aagaagctaaaatggaatatattacgaaatcaatgagtccttcctagcacaaggtgtactaagaaaga 41529576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 49069365 - 49069314
Alignment:
Q  293 gagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||| |||||    
T  49069365 gagatatttacacaaaaaccaaaacaatagagagagaaaataaaaacataat 49069314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 10700103 - 10700184
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    |||||||||||| ||| |||| || |||| |||| |||  || | ||||||||||||||||| ||||||||||||||||||||    
T  10700103 tgacaacttttgggacaaccataattttataaagaaaaaaag-tcttgacacaaaaatcaaagcaatagagagagaaagtaaa 10700184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 38656686 - 38656600
Alignment:
Q  258 aacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||  ||||  | |||||||||||||  ||||| ||||||  ||| ||||||||| ||||||||||||||||| |||||    
T  38656686 aacttttgtgagaaccattaatttacaaaggaaagtagatagtgacacggaaaccaaaacaattgagagagaaagtaaaaaaataat 38656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 18856571 - 18856534
Alignment:
Q  307 aaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||||||||||| |||||    
T  18856571 aaaatcaaaacaatagagagagaaagtaaaaacataat 18856534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 33776513 - 33776424
Alignment:
Q  255 gacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| ||||||||| ||||  | |||||||||||||  ||||| |||||| |||| ||||  |||||||||||||||| |||| |||||    
T  33776513 gacaatttttgtgacaaccactaatttacaaaggaaaatagatagtgacacgaaaaccaaagtaatagagagagaaagttaaaaaataat 33776424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 36533882 - 36533793
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataa 343  Q
    |||||||||||| ||| |||| || || | ||||||||  || |||| |||| |||||||||  ||||||||||||||||||||| ||||    
T  36533882 tgacaacttttgggacaaccataatttgataaaggaaagtagttattaacacgaaaatcaaagtaatagagagagaaagtaaaaacataa 36533793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 38259186 - 38259128
Alignment:
Q  284 aaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||| ||| |||||||||||||||||||||||||||  ||||||||||||| |||||    
T  38259186 aaagaaaaagaggtattgacacaaaaatcaaaacaataga--gagaaagtaaaaacataat 38259128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 40854620 - 40854661
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  40854620 cacaaaaatcaaagcaatagagagagaaagtaaaaatataat 40854661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 41430093 - 41430158
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| | |||||||||| |||| |||| ||||||||||| |||||||||| |||||    
T  41430093 tttacaaagaaaatcatatattgacacgaaaaccaaagcaatagagagataaagtaaaaatataat 41430158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 42553078 - 42552977
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    |||||||||||||||  |||| ||  ||| |||||||| ||  |||| || ||||||||| ||| ||| ||||| |||||||| |||||||| |||||||    
T  42553078 ttgtgttatttgaacaaccatttaattgataacttttgagaaaaccataattttacaaagaaaaagaggtattggcacaaaaaccaaaacaacagagaga 42552979  T
Q  328 ga 329  Q
    ||    
T  42552978 ga 42552977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 15325596 - 15325636
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  15325596 agatagtgacacaaaaataaaaacaatagagagagaaagta 15325636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 24532905 - 24532949
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||    
T  24532905 tgacacaaaaaccaaagcaatagagagagaaagtaaaaacataat 24532949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 327
Target Start/End: Complemental strand, 35207679 - 35207582
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| ||||| |||  || ||  |||| ||| ||||||| ||||||||  ||||||  |||||||||||| |||||| |||||||||||    
T  35207679 ttgtgttatttgaacatccatttataggataa--tttgagacaaccaaaattttacaaataaaatgaagtattgacacaaatatcaaagcaatagagaga 35207582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 3614333 - 3614396
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaag 287  Q
    |||||| |||||||||||| ||||| ||| ||||||||||||  || ||||||| |||||||||    
T  3614333 agagttatgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaag 3614396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 9944226 - 9944179
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||||||||||| ||||| |||||||||| |||||    
T  9944226 tattgacacgaaaatcaaaacaataaagagaaaaagtaaaaacataat 9944179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 12007127 - 12007182
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    ||||||||| || | ||||| || ||||||||||||| ||||||||||||||||||    
T  12007127 tttacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagagaaagta 12007182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 30941506 - 30941450
Alignment:
Q  292 tgagatattgacacaaaaatcaaaacaatagaga----gagaaagtaaaaagataat 344  Q
    |||| ||||||||||||||||||| |||||||||    |||||||||||||||||||    
T  30941506 tgaggtattgacacaaaaatcaaagcaatagagagagagagaaagtaaaaagataat 30941450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 327
Target Start/End: Complemental strand, 36207188 - 36207117
Alignment:
Q  256 acaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    |||| ||||| ||| || |||| ||||||||| |||| |||||||| || ||||| ||||||||||||||||    
T  36207188 acaatttttgggacaacaaaaaatttacaaagaaaataagatattggcagaaaaaccaaaacaatagagaga 36207117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Complemental strand, 38073391 - 38073356
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaac 260  Q
    |||||||||||||||||| |||||||||||||||||    
T  38073391 gagttgtgttatttgaacatccatatatgtgacaac 38073356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 38347679 - 38347608
Alignment:
Q  273 caaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| ||||||||| |||| |  ||||  ||||||||| |||| |||||||||| ||||||||||||||||    
T  38347679 caaaattttacaaagaaaataaagtattagcacaaaaattaaaataatagagagaaaaagtaaaaagataat 38347608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 42977927 - 42977982
Alignment:
Q  123 aatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaaagacac 178  Q
    |||||||||||||| ||| ||||| || |||| ||||||||||||||| |||||||    
T  42977927 aatatattaccaaatcaaagtgacattcctagtacaagatgtactaaggaagacac 42977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 338
Target Start/End: Original strand, 46812871 - 46812906
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||||||||||||||||| ||||||||||    
T  46812871 cacaaaaatcaaaacaatagagagataaagtaaaaa 46812906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 13152699 - 13152657
Alignment:
Q  303 cacaaaaatcaaaa-caatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  13152699 cacaaaaatcaaaagcaatagagagagaaagtaaaaggataat 13152657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 22540982 - 22541032
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| ||| ||||| ||||| ||||||||||||||||||||| |||||    
T  22540982 agatattaacataaaaaccaaaataatagagagagaaagtaaaaatataat 22541032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 338
Target Start/End: Complemental strand, 32453598 - 32453564
Alignment:
Q  304 acaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||||||||||| ||||||||||||||    
T  32453598 acaaaaatcaaaacaatagaaagagaaagtaaaaa 32453564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 37352219 - 37352185
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    ||||||||||||||||||| |||||||||||||||    
T  37352219 tgacacaaaaatcaaaacagtagagagagaaagta 37352185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 38340323 - 38340389
Alignment:
Q  279 tttacaaaggaaatgagatatt-gacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||| | || || ||||||| |||||||||||||||| |||||||||| |||||    
T  38340323 tttacaaagaaaatgaggtgtttgagacaaaaaccaaaacaatagagagaaaaagtaaaaacataat 38340389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 2300195 - 2300154
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||| |||||||| ||||||||||||||||||||| ||||||    
T  2300195 tattcacacaaaattcaaaacaatagagagagaaaataaaaa 2300154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 11326030 - 11325965
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||| |||||||||||||||| |  ||||||||||| ||| ||| |||||| |||||    
T  11326030 tttacaaagaaaaagagatattgacacaaacacaaaaacaatagaaagaaaaaataaaaatataat 11325965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 31274500 - 31274541
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||| |||||  ||||||||||||||||||||||||||    
T  31274500 tattgacataaaaactaaaacaatagagagagaaagtaaaaa 31274541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 34978402 - 34978361
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||| |||| ||||||||||||||||||||| ||||||    
T  34978402 cacaaaaaacaaagcaatagagagagaaagtaaaaggataat 34978361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 36703813 - 36703878
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||||| ||||| ||||||  |||  ||| |||||||||||||||||||||| |||||    
T  36703813 tttataaaggaaattagatagtgacacggaaactaaagcaatagagagagaaagtaaaaaaataat 36703878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 42584932 - 42584867
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| |  ||||||||| | ||||||| ||||||||||| |||||||||| |||||    
T  42584932 tttacaaagaaaatcatctattgacacgagaatcaaagcaatagagagataaagtaaaaatataat 42584867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 46532656 - 46532572
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaa-tgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||||||| |||| || |||| |||| ||| | || |||| |||| |||| |||||||||||||||| ||||||||||    
T  46532656 tgacaacttttgtgacaaccataa-tttataaagaaaaattaggtatttacacgaaaaccaaaacaatagagagataaagtaaaaa 46532572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 3062435 - 3062399
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaag 339  Q
    |||||||| |||||||||||||||| |||||||||||    
T  3062435 cacaaaaaccaaaacaatagagagataaagtaaaaag 3062399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 4225863 - 4225823
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    ||||||||| |||| |||||||||||||||| |||||||||    
T  4225863 tattgacacgaaaaccaaaacaatagagagataaagtaaaa 4225823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 13401555 - 13401631
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacac 305  Q
    ||||||||||||||  |||| || ||||||| ||||||||| ||||  | |||||||||||||  ||||| ||||||    
T  13401555 tgtgttatttgaacaaccatttaagtgacaatttttgtgacaaccactaatttacaaaggaaaatagatagtgacac 13401631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 16708274 - 16708230
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||  ||||||||||||||||||||||||| ||| ||||||    
T  16708274 agatatttgcacaaaaatcaaaacaatagagagataaaataaaaa 16708230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 17682510 - 17682466
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||  ||||||||||||||||||||||||| ||| ||||||    
T  17682510 agatatttgcacaaaaatcaaaacaatagagagataaaataaaaa 17682466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 22315416 - 22315364
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaa 331  Q
    |||| |||||||| ||| |||| |||||||||||||||||| ||||| |||||    
T  22315416 tttataaaggaaaagagctattaacacaaaaatcaaaacaacagagaaagaaa 22315364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 22925218 - 22925274
Alignment:
Q  271 accaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||| ||||||| | |||| |||||||||||||||||| ||| ||||| |||||    
T  22925218 accaaaattttacaaggaaaataagatattgacacaaaaattaaagcaatatagaga 22925274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 330
Target Start/End: Original strand, 32952411 - 32952443
Alignment:
Q  298 attgacacaaaaatcaaaacaatagagagagaa 330  Q
    |||||||||||||||||| ||||||||||||||    
T  32952411 attgacacaaaaatcaaagcaatagagagagaa 32952443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 33057486 - 33057454
Alignment:
Q  302 acacaaaaatcaaaacaatagagagagaaagta 334  Q
    |||||||||||||| ||||||||||||||||||    
T  33057486 acacaaaaatcaaagcaatagagagagaaagta 33057454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 40227113 - 40227173
Alignment:
Q  284 aaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| |||| ||||||||||| |||||||||||||||| ||||| ||  |||||| |||||    
T  40227113 aaagaaaataagatattgacataaaaatcaaaacaataaagagaaaatataaaaacataat 40227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 43370489 - 43370533
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaagtaaaaagataa 343  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||||    
T  43370489 ttgacacaaaaatcaaaacaataaagagataaaataaaaacataa 43370533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 47684272 - 47684236
Alignment:
Q  298 attgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  47684272 attgacacaaaaatcaaaataatagagaaagaaagta 47684236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 552976 - 552857
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| ||||||||    
T  552976 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagag 552877  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  552876 agagaaagtaaaaagataat 552857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 32316815 - 32316935
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| || ||||||||||| |||| |||||||    
T  32316815 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtactgacacaaaaaccaaagcaataga 32316914  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||| ||||||||||||||||    
T  32316915 gagataaagtaaaaagataat 32316935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 230 - 344
Target Start/End: Original strand, 18737460 - 18737574
Alignment:
Q  230 gtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagaga 329  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||| ||||||||| ||||||| ||||| |||||||| |||||||||| |||||||    
T  18737460 gtgttatttgaacatccatgtatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgtcacaaaaaccaaaacaataaagagaga 18737559  T
Q  330 aagtaaaaagataat 344  Q
    |||||||||||||||    
T  18737560 aagtaaaaagataat 18737574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 15974793 - 15974672
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||  || | ||||||||| |||| ||||||    
T  15974793 aagagttgtgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaagtagtaacacaaaaaccaaagcaatag 15974694  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||||||||    
T  15974693 agagagaaaataaaaagataat 15974672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 5694039 - 5694158
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||| ||| | ||| |||||||||||||||| ||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  5694039 gagttgtgttatttaaacattcatgtatgtgacaacttttgagacaacctaaattttacaaaggaaatgaggtattgacacaaaaatcaaaacaatagag 5694138  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||| |||||||||| |||||    
T  5694139 agaaaaagtaaaaacataat 5694158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 26595534 - 26595413
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||  || ||||||| ||||||||| ||||||| |||||||||||||| |||| ||||||    
T  26595534 aagagttgtgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaatag 26595435  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  26595434 agagagaaagtaaaaacataat 26595413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 34047572 - 34047451
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||| |||||||| |||| ||||||    
T  34047572 aagagttttgttatttgaacatccataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaaagagatattggcacaaaaaccaaagcaatag 34047473  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||| ||  ||||||||||||    
T  34047472 agagataagataaaaagataat 34047451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 13689882 - 13690001
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||| ||||  ||| || |||| |||| |||||||||||| ||||||||||||||||||| ||||||||    
T  13689882 gagttgtgttatttgaacatccatatatgtgacaatttttacgacaactaaaattttataaaggaaatgaggtattgacacaaaaatcaaagcaatagag 13689981  T
Q  325 agagaaagtaaaaagataat 344  Q
    | | |||||||||| |||||    
T  13689982 aaaaaaagtaaaaaaataat 13690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 340
Target Start/End: Complemental strand, 14818115 - 14818000
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |  |||||| |||||||||||||||| ||||||| |||| |||||||||||| || || |||||||| |||||||||| ||    
T  14818115 gagttgtgttatttgaacatttatatatatgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaaaaccaaaacaataaag 14818016  T
Q  325 agagaaagtaaaaaga 340  Q
    ||||||||||||||||    
T  14818015 agagaaagtaaaaaga 14818000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 22079451 - 22079570
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| ||||| ||  |||| ||||||||||| ||||||| ||| ||||| ||||||  ||||||||||||||||||| ||||||||    
T  22079451 gagttgtgttatttgaacatccatttagatgaccacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatcaaagcaatagag 22079550  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  22079551 agagaaagtaaaaacataat 22079570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 31077977 - 31077858
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||  | |||| ||||||||||||||||||| ||||||| |||||||||||| |||| || ||||||||||| |||||||||||||    
T  31077977 gagttgtgttatttgaatattcatacatgtgacaacttttgtgacaaccaaaattttacaaaggaagtgaggtagtgacacaaaaaccaaaacaatagag 31077878  T
Q  325 agag-aaagtaaaaagataa 343  Q
    | || |||||||||||||||    
T  31077877 aaagaaaagtaaaaagataa 31077858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 1156904 - 1156784
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||| | ||||| |||  ||||||||||||||| || |||||||| ||||  ||||||    
T  1156904 agagttgtgttatttgaacatccatatatttgataacttttgtgacaatcaaaattttgtaaaggaaatgagatagtggcacaaaaaccaaagtaataga 1156805  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||    
T  1156804 gagagaaagtaaaaaaataat 1156784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 33430248 - 33430340
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaa 315  Q
    ||||||||||||||||| || | |||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||||||||| ||||    
T  33430248 aagagttgtgttatttggacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaa 33430340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 16199639 - 16199526
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||      ||||||    
T  16199639 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacaca------aaaaca 16199546  T
Q  319 atagagagagaaagtaaaaa 338  Q
    ||||||||||||| ||||||    
T  16199545 atagagagagaaaataaaaa 16199526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 3853206 - 3853313
Alignment:
Q  236 tttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaa 335  Q
    ||||||| | ||| ||| |||||||||||| ||| || || | ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |    
T  3853206 tttgaacattcatttatatgacaacttttgagacaacaaagattttacaaagaaaatgagatattgacacaaaaatcaaagcaatagagagagaaagtta 3853305  T
Q  336 aaagataa 343  Q
    ||| ||||    
T  3853306 aaacataa 3853313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 277174 - 277056
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||| ||| | | | ||  |||||| ||||||||| ||||||| ||||||||| |||||| |||||||||||||||||||| ||||||||    
T  277174 gagttgtgttatttaaacattcctttagatgacaatttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagcaatagag 277075  T
Q  325 agagaaagtaaaaagataa 343  Q
    ||| ||| |||||| ||||    
T  277074 agaaaaattaaaaacataa 277056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 17551262 - 17551385
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    |||| |||||||||||||||||| || || | | ||||| | |||||||| ||||||| |||| |||| |||||||  ||||||||||||| ||||||||    
T  17551262 tttatgagttgtgttatttgaacatctatttttatgacagcatttgtgacaaccaaaa-tttataaagaaaatgagggattgacacaaaaaccaaaacaa 17551360  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    |||||||| |||||||||| |||||    
T  17551361 tagagagataaagtaaaaacataat 17551385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 11612370 - 11612252
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||  |  |||||||||| || ||||||||  | ||||| ||||||||| ||||||| ||||  ||||||||| ||| |||||||||    
T  11612370 agttgtgttatttgaatatttatatatgtgataatttttgtgataatcaaaattttacaaagaaaatgaggtatttgcacaaaaattaaagcaatagaga 11612271  T
Q  326 gagaaagtaaaaagataat 344  Q
     ||||||||||||||||||    
T  11612270 aagaaagtaaaaagataat 11612252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 224 - 338
Target Start/End: Complemental strand, 30457689 - 30457575
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||||||| || ||| ||||| ||| |||||||||||| ||  ||||||| || ||| || ||||||| |||||||||||||| |||||||| | |    
T  30457689 agagttgtgttaattcaacatccatttatatgacaacttttgagataaccaaaatttcacatagaaaatgaggtattgacacaaaaaccaaaacaacaaa 30457590  T
Q  324 gagagaaagtaaaaa 338  Q
    |||||||||||||||    
T  30457589 gagagaaagtaaaaa 30457575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 327
Target Start/End: Complemental strand, 4820555 - 4820448
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    |||||||||||||||||||||||  | || ||  ||| |||||||| ||| | ||||| ||||||||| |||||||  |||||||||||||||||| |||    
T  4820555 tttaagagttgtgttatttgaacaactatttacatgataacttttgagacaatcaaaattttacaaagaaaatgaggcattgacacaaaaatcaaagcaa 4820456  T
Q  320 tagagaga 327  Q
    ||||||||    
T  4820455 tagagaga 4820448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 271 - 344
Target Start/End: Original strand, 5080501 - 5080574
Alignment:
Q  271 accaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| ||||||||||||||||| || |||||||||||  ||| |||||||||||||||||||||| |||||    
T  5080501 accaaaattttacaaaggaaatgaggtagtgacacaaaaactaaagcaatagagagagaaagtaaaaaaataat 5080574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 344
Target Start/End: Complemental strand, 6271527 - 6271414
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    |||||||||||||||  |||| |   ||||||||||||  |||| || || ||||||||| |||  ||||||||||||||||| ||||||||||||||||    
T  6271527 ttgtgttatttgaacaaccattttaatgacaacttttgatacgatcataa-tttacaaagaaaa--agatattgacacaaaaaccaaaacaatagagaga 6271431  T
Q  328 gaaagtaaaaagataat 344  Q
    ||||||||||| |||||    
T  6271430 gaaagtaaaaacataat 6271414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 24900959 - 24900838
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||  | ||| ||||||| ||||  || |  |||| ||||||||| |||||||  |||| |||||||| |||| ||||||    
T  24900959 aagagttgtgttatttgaacatcattttatatgacaacatttgcaacaattaaaattttacaaagaaaatgagtgattggcacaaaaaccaaagcaatag 24900860  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  24900859 agagagaaagtaaaaatataat 24900838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 8098524 - 8098600
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaaga 340  Q
    |||||| ||||||| |||| ||||||||| || || ||||||||||| |||| ||||||||||||||||||||||||    
T  8098524 tgtgacaaccaaaattttagaaaggaaataaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaaga 8098600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 31883220 - 31883302
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    |||||| ||||| ||| |||| || ||||||||| ||| ||| | ||||||||||||||||| ||||||||||||||||||||    
T  31883220 tgacaatttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaagcaatagagagagaaagtaaa 31883302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 33603168 - 33603264
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    |||||||||| ||||||| ||||| ||| |||||||||||  ||    ||||| ||||||||| ||||||| ||||||||||||||||||| |||||    
T  33603168 gagttgtgttttttgaacatccatttatatgacaacttttaagattgtcaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaata 33603264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 20998087 - 20998145
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    ||||||||| ||||||| |||||| ||||||| |||| |||||||||||||||||||||    
T  20998087 tttacaaagaaaatgaggtattgatacaaaaaccaaagcaatagagagagaaagtaaaa 20998145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 344
Target Start/End: Complemental strand, 30956249 - 30956136
Alignment:
Q  231 tgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaa 330  Q
    ||||||||||||  |||| ||| ||| ||||| || ||| |||| |  ||||||||| |||| |||||||| ||| || |||||| ||||||||||| ||    
T  30956249 tgttatttgaacaaccatttatatgaaaacttatgggacaaccatagatttacaaagaaaattagatattggcacgaagatcaaatcaatagagagataa 30956150  T
Q  331 agtaaaaagataat 344  Q
    ||||||| ||||||    
T  30956149 agtaaaatgataat 30956136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 11072290 - 11072242
Alignment:
Q  289 aaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  11072290 aaatcagatattgacacaaaaaccaaaacaataaagagagaaagtaaaa 11072242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 8991013 - 8990976
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaaga 340  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  8991013 cacaaaaatcaaaacaatagaaagagaaagtaaaaaga 8990976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 9015460 - 9015423
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaaga 340  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9015460 cacaaaaatcaaaacaatagaaagagaaagtaaaaaga 9015423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 25811804 - 25811845
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||| |||| ||||||||||||||||||||||||||||    
T  25811804 cacaaaaaccaaagcaatagagagagaaagtaaaaagataat 25811845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 321
Target Start/End: Original strand, 30423443 - 30423536
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||| || || ||||||| ||||||||  || | |||| ||||| |||| ||||||| |||||| |||||| ||||| |||||    
T  30423443 ttgtgttatttgaacatctatttatgtgataacttttgatacaatcaaagctttataaagaaaatgaggtattgatacaaaattcaaagcaata 30423536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 3534212 - 3534276
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtactaagaa 172  Q
    |||| |||||||| |||||||||||||||  || ||| |||| |||||||||| |||||||||||    
T  3534212 aagaggctaaaatggaatatattaccaaattaaagtgtctttcctagcacaaggtgtactaagaa 3534276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 325
Target Start/End: Original strand, 2241946 - 2242013
Alignment:
Q  258 aacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||||| |||||||   ||||||| |||||||  ||||||||||||| |||| |||||||||    
T  2241946 aacttttgtgacaaccaaaataatacaaagaaaatgaggcattgacacaaaaaccaaagcaatagaga 2242013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 3772483 - 3772420
Alignment:
Q  281 tacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| || | ||||| |||||||||||||||| ||||||| ||| || |||||||||||||    
T  3772483 tacaaagaaatttagatagtgacacaaaaatcaaatcaatagaaagaaaaggtaaaaagataat 3772420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 16368006 - 16368053
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||| ||| ||||||| ||||||||||||||| |||||    
T  16368006 tattgacacaaaaaccaagacaatagtgagagaaagtaaaaatataat 16368053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 32295353 - 32295294
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| |||  ||||||||| |||||||||||||||||| ||||| ||| ||||||    
T  32295353 tttacaaagaaaagtagatattgatacaaaaatcaaaacaataaagagataaaataaaaa 32295294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 336
Target Start/End: Original strand, 33195279 - 33195318
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  33195279 tattgacacaaaaatcaaaacaatagaaagagaaaataaa 33195318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 11324720 - 11324662
Alignment:
Q  108 aagaagctaaaatagaatatattaccaaaacaatgtgacttttctagcacaagatgtac 166  Q
    |||||| |||||| ||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  11324720 aagaagttaaaatggaatatattacgaaatcaaagtgtctttcctagcacaagatgtac 11324662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 17496054 - 17496092
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  17496054 tgacacaaaaatcaaaacaataaagagataaagtaaaaa 17496092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 31749479 - 31749429
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| |||| ||||| ||||||||||||||| |||||||||| |||||    
T  31749479 agatatttacacgaaaattaaaacaatagagagataaagtaaaaaaataat 31749429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 10335680 - 10335615
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||  ||||| ||||||  ||| ||||  ||||||||||||||||||||| |||||    
T  10335680 tttacaaaggaaagtagatagtgacacggaaaccaaagtaatagagagagaaagtaaaaaaataat 10335615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 338
Target Start/End: Complemental strand, 10826682 - 10826573
Alignment:
Q  229 tgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagag 328  Q
    ||||||||||||||  |||| |  |||| |||||||||||| ||||  | ||||||||| |||  |||||  |||||  ||| ||||  |||||||||||    
T  10826682 tgtgttatttgaacaaccatttgagtgataacttttgtgacaaccactaatttacaaagaaaagtagatagagacacggaaaacaaagtaatagagagag 10826583  T
Q  329 aaagtaaaaa 338  Q
    ||||||||||    
T  10826582 aaagtaaaaa 10826573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 8505740 - 8505780
Alignment:
Q  304 acaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||| ||||||||||| ||||||||| ||||||    
T  8505740 acaaaaatcaaagcaatagagagaaaaagtaaaaggataat 8505780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 8645409 - 8645373
Alignment:
Q  308 aaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  8645409 aaatcaaagcaatagagagagaaagtaaaaggataat 8645373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 325
Target Start/End: Complemental strand, 10375766 - 10375738
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||||||||||||||||||||||    
T  10375766 tattgacacaaaaatcaaaacaatagaga 10375738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 20578056 - 20578016
Alignment:
Q  298 attgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||||| |||||||||| ||||| ||||||||||    
T  20578056 attgacacaaaaaccaaaacaataaagagaaaaagtaaaaa 20578016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 25142509 - 25142557
Alignment:
Q  296 atattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||| |||||||||  |||||||| |||||||||||| |||||    
T  25142509 atattgacacgaaaatcaaactaatagagaaagaaagtaaaaatataat 25142557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 218 - 344
Target Start/End: Original strand, 23369213 - 23369339
Alignment:
Q  218 aatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaac 317  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||| || || |||||||| |||| |    
T  23369213 aatttaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaatcttacaaaggaaatgaggtagtggcacaaaaaccaaagc 23369312  T
Q  318 aatagagagagaaagtaaaaagataat 344  Q
    |||||||||| ||||||||||||||||    
T  23369313 aatagagagataaagtaaaaagataat 23369339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 26732410 - 26732289
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| || || |||||||| |||||||||||    
T  26732410 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaaacaatag 26732311  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||||||||    
T  26732310 agagagaaaataaaaagataat 26732289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 37297234 - 37297113
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||| ||||||||||| || ||||||||||| |||| |||||    
T  37297234 taagagttgtgttatttgaacatccatatatttgacaacttttgtgacaaccaaaattttac-aaggaaatgaggtagtgacacaaaaaccaaagcaata 37297136  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||    
T  37297135 gagagagaaagtaaaaagataat 37297113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 11068873 - 11068752
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||| ||||||||||||||| | |||||||||||||||||||||| | ||||||| |||||||||||||||||  | |||||||||||||||| ||||||    
T  11068873 aagaattgtgttatttgaacattcatatatgtgacaacttttgtggcaaccaaaattttacaaaggaaatgaggcagtgacacaaaaatcaaagcaatag 11068774  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  11068773 agagagaaagtaaaaagataat 11068752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 51986227 - 51986106
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| ||||  |||||    
T  51986227 aagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagaaatag 51986128  T
Q  323 agagagaaagtaaaaagataat 344  Q
    | ||||||||||||||||||||    
T  51986127 atagagaaagtaaaaagataat 51986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 27050973 - 27051093
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||| |||||||||||||| | |||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||| |    
T  27050973 agagatgtgttatttgaacattcataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgagatattgacacaaaaaccaaaacaataaa 27051072  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||| |||||||||||||    
T  27051073 gagagaaggtaaaaagataat 27051093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 53801647 - 53801764
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||  ||| ||||  ||    
T  53801647 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaactaaagcaat--ag 53801744  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  53801745 agagaaagtaaaaagataat 53801764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 29175410 - 29175291
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||| |||| ||  ||    
T  29175410 aagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagtaaatgagctattgacacaaaaaccaaagca--ag 29175313  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  29175312 agagagaaagtaaaaagataat 29175291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 340
Target Start/End: Original strand, 24575742 - 24575854
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||| |||| |||||||||||| ||||| |||||||| |||| |||||||||||    
T  24575742 ttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagcaatagagaga 24575841  T
Q  328 gaaagtaaaaaga 340  Q
    |||||||||||||    
T  24575842 gaaagtaaaaaga 24575854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 39440667 - 39440555
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| | |||||||||||||||||||||||| | ||||| |||| |||||||||||| || |||||||||||||||| ||||||||    
T  39440667 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaatcaaaattttagaaaggaaatgaggtagtgacacaaaaatcaaagcaatagag 39440568  T
Q  325 agagaaagtaaaa 337  Q
    |||||||||||||    
T  39440567 agagaaagtaaaa 39440555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 43175167 - 43175048
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||  | ||||| ||||||||||||||||| || ||||||||||| |||| | ||||||    
T  43175167 gagttgtgttatttgaacatccatatatgtgacaacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagccatagag 43175068  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  43175067 agagaaagtaaaaaaataat 43175048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 10250401 - 10250522
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||| ||||||  || || |||||||| |||| ||||||    
T  10250401 aagaattgtgttatttgaacatccatatatgcgacaacttttgtgacaaccaaaattttacaaagaaaatgaagtagtggcacaaaaaccaaagcaatag 10250500  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  10250501 agagagaaagtaaaaagataat 10250522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 37997439 - 37997318
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||| |||| ||||||||| || |||||||||| || |||||| || ||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||    
T  37997439 aagagctgtgctatttgaacatctatatatgtgataatttttgttacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaatag 37997340  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  37997339 agagagaaagtaaaaagataat 37997318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 344
Target Start/End: Complemental strand, 44539921 - 44539800
Alignment:
Q  221 ttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| ||||    
T  44539921 ttaagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgtcacaaaaaccaaagcaat 44539822  T
Q  321 agagagagaaagtaaaaagataat 344  Q
    |||  |||||| ||||||||||||    
T  44539821 aga--gagaaaataaaaagataat 44539800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 343
Target Start/End: Original strand, 26724859 - 26724975
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| || || |||| ||||||||||||||||| || ||||||||||| ||||||||||||    
T  26724859 agagttgtgttatttgaacatccatatatgtgataacttttgtaacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaaacaataga 26724958  T
Q  324 gagagaaagtaaaaagataa 343  Q
    |||   ||||||||||||||    
T  26724959 gag---aagtaaaaagataa 26724975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 15175729 - 15175610
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||| |||||||||| ||||||||||||||||||||||| || ||||||| ||||||||||||||||| ||||  ||||||||  ||| |||||||     
T  15175729 gagttgtattatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattagcacaaaaacaaaagcaatagaa 15175630  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||| ||||||||||||||||    
T  15175629 agataaagtaaaaagataat 15175610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 218 - 344
Target Start/End: Complemental strand, 27965175 - 27965051
Alignment:
Q  218 aatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaac 317  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||  || ||||||||| || ||||||||||| |||| |    
T  27965175 aattttagagttgtgttatttgaacatccatatatgtgacaacttctgtgacaaccaaaatttt--aatggaaatgaggtagtgacacaaaaaccaaagc 27965078  T
Q  318 aatagagagagaaagtaaaaagataat 344  Q
    ||||| || ||||||||||||||||||    
T  27965077 aatagggaaagaaagtaaaaagataat 27965051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 344
Target Start/End: Original strand, 31641445 - 31641572
Alignment:
Q  217 aaatttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaa 316  Q
    ||||| |||||||||||||||||||| | |||||| |||| |||||||||||| ||||||| |||| ||||||||| || || ||||||||||||||||     
T  31641445 aaattaaagagttgtgttatttgaacattcatatacgtgataacttttgtgacaaccaaaattttataaaggaaataaggtagtgacacaaaaatcaaag 31641544  T
Q  317 caatagagagagaaagtaaaaagataat 344  Q
    |||| |||| |||||||||||| |||||    
T  31641545 caatggagacagaaagtaaaaatataat 31641572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 233 - 344
Target Start/End: Complemental strand, 38134528 - 38134417
Alignment:
Q  233 ttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaag 332  Q
    |||||||||| | |||| ||||||||||||||||||  ||||||| |||||||||||||||||  | ||||||||||| |||||||||||||| ||||||    
T  38134528 ttatttgaacattcatacatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggcagtgacacaaaaaccaaaacaatagagaaagaaag 38134429  T
Q  333 taaaaagataat 344  Q
    ||||||||||||    
T  38134428 taaaaagataat 38134417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 46213153 - 46213034
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||  ||||||||||||| ||||||||| || ||||||| ||||||||||||||||| || |  |||||||| |||| ||| ||||    
T  46213153 gagttgtgttatttgaaaatccatatatgtgaaaacttttgtaacaaccaaaattttacaaaggaaatgaggtagttgcacaaaaaccaaagcaacagag 46213054  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||| ||||||||||||||||    
T  46213053 agaaaaagtaaaaagataat 46213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 2268404 - 2268514
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| |||||||||||||||||            ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  2268404 taagagttgtgttatttgaacatccatatatgtgacaac------------caaaattttacaaaggaaatgagatattgacacaaaaaccaaaacaata 2268491  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    || ||| ||||||||||||||||    
T  2268492 gaaagaaaaagtaaaaagataat 2268514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 38376378 - 38376491
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| || |||||||||| || ||||||||| | ||||| ||||||||| |||||||||| || |||||||||||||  |||||||    
T  38376378 gagttgtgttatttgaacatctatatatgtgataatttttgtgacaatcaaaattttacaaagaaaatgagatagtggcacaaaaatcaaagtaatagag 38376477  T
Q  325 agagaaagtaaaaa 338  Q
    ||| ||||||||||    
T  38376478 agaaaaagtaaaaa 38376491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 39478623 - 39478499
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaa--acaa 319  Q
    |||||||||||||  || ||| ||||||||| |||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||  |  |    
T  39478623 taagagttgtgtttattaaacatccatatatatgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagtaata 39478524  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    |||||| |||||||||||| |||||    
T  39478523 tagagaaagaaagtaaaaaaataat 39478499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 5622642 - 5622522
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||  || |||||||| |||||||||||||  || |||| ||||||||||||||||| || |  |||||||| |||| |||||||    
T  5622642 agagttgtgttatttgaagatctatatatgtcacaacttttgtgataactaaaattttacaaaggaaatgaggtagttgcacaaaaaccaaagcaataga 5622543  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||| ||||||||||||||||    
T  5622542 gagaaaaagtaaaaagataat 5622522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 36178090 - 36177970
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| |  |||||||||| |||||||||||| || |||| |||| |||||||||||| || ||  ||||||| |||| |||||||    
T  36178090 agagttgtgttatttgaacatttatatatgtgataacttttgtgacaactaaaattttataaaggaaatgaggtagtggtacaaaaaccaaagcaataga 36177991  T
Q  324 gagagaaagtaaaaagataat 344  Q
    || ||||||||||||||||||    
T  36177990 gaaagaaagtaaaaagataat 36177970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 42853763 - 42853641
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| ||||| |  ||||||| ||||| ||| | ||||| |||| |||| ||||||| |||||||||||||| |||| |||||    
T  42853763 taagagttgtgttatttgaacatccatttgagtgacaatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaaccaaagcaata 42853664  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||||||||||| |||| |||||    
T  42853663 gagagagaaagtgaaaacataat 42853641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 40348974 - 40348858
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| | ||     ||||||||||||||||| | ||||| |||  |||| |||||||||| ||||||||||| |||| ||||||    
T  40348974 aagagttgtgttatttgaacattca-----gtgacaacttttgtgacaatcaaaattttttaaagaaaatgagatagtgacacaaaaaccaaagcaatag 40348880  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||    
T  40348879 agagagaaagtaaaaagataat 40348858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 26492192 - 26492088
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||| | ||||| ||||||||||||||||  || || |||||||| |||| ||||||    
T  26492192 aagagttgtgttatttgaacatctatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgaagtagtggcacaaaaaccaaagcaatag 26492093  T
Q  323 agaga 327  Q
    |||||    
T  26492092 agaga 26492088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 34616750 - 34616637
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||| || || ||| |||||||||||| ||| ||||||| |||| |||| ||||||||||||||||||      ||||||    
T  34616750 atttaagagttgtgttatttgaacatctatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagatattgacaca------aaaaca 34616657  T
Q  319 atagagagagaaagtaaaaa 338  Q
    ||||||||||||| ||||||    
T  34616656 atagagagagaaaataaaaa 34616637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 338
Target Start/End: Complemental strand, 38382510 - 38382397
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaaca 318  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||      ||||||    
T  38382510 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacaca------aaaaca 38382417  T
Q  319 atagagagagaaagtaaaaa 338  Q
    ||||||||||||| ||||||    
T  38382416 atagagagagaaaataaaaa 38382397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 47182030 - 47181939
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaa 310  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  47182030 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 47181939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 48402079 - 48402170
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaa 310  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  48402079 atttaagagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaaa 48402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 2575676 - 2575780
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || || ||| |||||||||||||||| || |||  ||||||||| |||||||| ||||||||| ||| |||| ||||||    
T  2575676 aagagttgtgttatttgaacatctatttatatgacaacttttgtgacaactaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaatag 2575775  T
Q  323 agaga 327  Q
    |||||    
T  2575776 agaga 2575780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 50608551 - 50608631
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||    
T  50608551 tgtgacaactaaaattttacaaaggaaatgagatattgacacaaaaatcaaagtaatagagagaggaagtaaaaaaataat 50608631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 224 - 336
Target Start/End: Original strand, 50831642 - 50831754
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||||||||||||||  |||| |   |||||||||||| ||| |||| || ||||||||| ||| ||| | ||||||||||||||||| |||||||    
T  50831642 agagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataattttacaaagaaaaagaggtcttgacacaaaaatcaaagcaataga 50831741  T
Q  324 gagagaaagtaaa 336  Q
    |||||||||||||    
T  50831742 gagagaaagtaaa 50831754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 7632349 - 7632468
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| ||  | ||| ||||||| ||||  || ||||||| ||||||||  |||||||  |||| ||||||||||||| ||||||||    
T  7632349 gagttgtgttatttgaacatcattttatatgacaacctttgcaacaaccaaaattttacaaataaaatgagtgattggcacaaaaatcaaagcaatagag 7632448  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  7632449 agagaaagtaaaaatataat 7632468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 46634271 - 46634164
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| ||||||||||||||||||            |||| ||||||||||||||||| || ||||||||||||||||  ||||||     
T  46634271 gagttgtgttatttgaacatccatatatgtgacaact------------aaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagtaatagaa 46634184  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  46634183 agagaaagtaaaaagataat 46634164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 56363927 - 56364017
Alignment:
Q  219 atttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaa 309  Q
    |||||||||||||||||||||||| ||||| ||  |||||||||||| ||| ||||||| |||| |||| ||||||| |||||||||||||    
T  56363927 atttaagagttgtgttatttgaacatccatttacatgacaacttttgagacaaccaaaattttataaagaaaatgaggtattgacacaaaa 56364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 328
Target Start/End: Original strand, 56474656 - 56474758
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| || ||  |  | |||| ||||| ||| ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  56474656 agttgtgttatttgaacatctattcacataacaatttttgagacaaccaaaactttacaaagaaaatgaggtattgacacaaaaaccaaaacaatagaga 56474755  T
Q  326 gag 328  Q
    |||    
T  56474756 gag 56474758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 19473842 - 19473963
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||| ||||||||||||||  | ||| ||| |||||||||||| ||| | ||||| ||||||||| ||||||  |||||||||||||| ||||||| |||    
T  19473842 aagatttgtgttatttgaagatgcatttatatgacaacttttgagacaatcaaaattttacaaagaaaatgaagtattgacacaaaaaccaaaacattag 19473941  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||| ||||| |||| |||||    
T  19473942 agagaaaaagttaaaacataat 19473963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 19232017 - 19232140
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    |||||||||||||||||||||||  |||  |||||||||| ||||   || ||||||| ||| ||||| |||  || ||||| ||||||||||||| |||    
T  19232017 tttaagagttgtgttatttgaacaaccaattatgtgacaatttttagtacaaccaaaattttgcaaagaaaaaaag-tattggcacaaaaatcaaagcaa 19232115  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||| |||||    
T  19232116 tagagagagaaagtaaaaatataat 19232140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 29531533 - 29531613
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| ||||||| ||||||||||||||||| || ||||||||||| |||||||||||| ||| ||| ||||||||||||    
T  29531533 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaaacaatagaaagaaaaaataaaaagataat 29531613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 50721631 - 50721751
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| ||  | ||| ||||||| ||||  || || |||| ||||||||| |||||||  ||||||||||||| |||| || ||||    
T  50721631 agagttgtgttatttgaacatcattttatatgacaacctttgcaacaactaaaattttacaaagaaaatgagtgattgacacaaaaaccaaagcagtaga 50721730  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||||||| |||||    
T  50721731 gagagaaagtaaaaatataat 50721751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 12387607 - 12387672
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  12387607 tttacaaagaaaatgaggtattgacacaaaaatcaaaacaataaagagacaaagtaaaaatataat 12387672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 39195242 - 39195121
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| || || ||| ||||||| |||||||  | ||||  ||||||||| |||||||| |||| |||| ||| |||| |||||     
T  39195242 aagagttgtgttatttgaacatctatttatatgacaacatttgtgataatcaaagttttacaaagaaaatgagagattggcacacaaaccaaagcaatat 39195143  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||||| || |||||    
T  39195142 agagagaaagtaacaacataat 39195121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 329
Target Start/End: Complemental strand, 39655011 - 39654903
Alignment:
Q  221 ttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    ||||||||||||||||||||||  | || ||  ||| || ||||  ||| |||| || ||||||||| ||||||| ||||||||||||||||||| ||||    
T  39655011 ttaagagttgtgttatttgaacaactatttagatgataatttttaagacaaccataaatttacaaagaaaatgaggtattgacacaaaaatcaaagcaat 39654912  T
Q  321 agagagaga 329  Q
    |||||||||    
T  39654911 agagagaga 39654903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 337
Target Start/End: Original strand, 12595516 - 12595630
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||| ||||||||||||||  |||| |   |||||| ||||| ||| |||| || |||| ||||||||  || ||||||||| |||| |||||||||||    
T  12595516 aagagatgtgttatttgaacaaccattttgatgacaatttttgggacaaccataaatttataaaggaaagtaggtattgacacgaaaaccaaaacaatag 12595615  T
Q  323 agagagaaagtaaaa 337  Q
    |||||||||||||||    
T  12595616 agagagaaagtaaaa 12595630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 53796810 - 53796720
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||| ||||  | |||||||||||||  ||||| ||||||  |||  |||||||||||||||||||||||||| |||||    
T  53796810 tgacaacttttgtgacaaccactaatttacaaaggaaagtagatagtgacacggaaactaaaacaatagagagagaaagtaaaaaaataat 53796720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 25123213 - 25123278
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||| ||||||  |||||||| | || ||||||||||||||||||||||||||||    
T  25123213 tttacaaaggaaatgggatattagcacaaaaacctaagcaatagagagagaaagtaaaaagataat 25123278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 39606155 - 39606031
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgaga-----tattgacacaaaaatcaaaacaa 319  Q
    ||||||| |||||||||| |  ||||||||||||||||||  ||  ||||||| |||| ||||||||||| |     ||||| ||||||||| ||| |||    
T  39606155 gagttgtattatttgaacatttatatatgtgacaacttttacgataaccaaaattttataaaggaaatgaaatattgtattggcacaaaaattaaagcaa 39606056  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    ||||||| |||| ||||||||||||    
T  39606055 tagagagggaaaataaaaagataat 39606031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 10474031 - 10474118
Alignment:
Q  256 acaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataa 343  Q
    ||||||||| |||| |||| || ||||||||| ||| ||  |||||||||||||||||||  |||||||||| |||||||||| ||||    
T  10474031 acaacttttatgacaaccataaatttacaaagaaaaagaagtattgacacaaaaatcaaagtaatagagagaaaaagtaaaaatataa 10474118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 1627441 - 1627565
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgt---gacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    ||||||||||||||||||||  | || |   |||||||||||||   ||| |||| || ||||||||| ||||||| ||||| |||||||| |||| |||    
T  1627441 aagagttgtgttatttgaacaactatttggatgacaacttttgttgtgacaaccataaatttacaaagaaaatgaggtattggcacaaaaaccaaagcaa 1627540  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
     |||||| ||||||||||| |||||    
T  1627541 cagagagggaaagtaaaaacataat 1627565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 16019586 - 16019541
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||    
T  16019586 ttgacacaaaaatcaaagcaatagagagagaaagtaaaaatataat 16019541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 5249980 - 5249933
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  5249980 tattgacacgaaaaccaaaacaatagagagagaaagtaaaaacataat 5249933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 26910321 - 26910266
Alignment:
Q  289 aaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| || || ||||||||||||| |||||||||||||||||||||| |||||    
T  26910321 aaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaaaataat 26910266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 31995804 - 31995922
Alignment:
Q  228 ttgtgttatttgaacgtccat--atatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||||||||  ||||  |||| | |||||||||| ||| |  |||| |||| |||| ||||||| ||||||||||||||  ||||||||| |||    
T  31995804 ttgtgttatttgaacaaccatttatatataacaacttttgagacaattaaaattttagaaagaaaatgaggtattgacacaaaaactaaaacaataaaga 31995903  T
Q  326 gagaaagtaaaaagataat 344  Q
     ||||||| |||| |||||    
T  31995904 aagaaagttaaaacataat 31995922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 35874820 - 35874903
Alignment:
Q  255 gacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||| ||| || | || ||||||||| |||  | ||||||| ||  |||||||||||||||||||||||||||||||    
T  35874820 gacaacttttgggacaactataaatttacaaagaaaagtatatattgatacggaaatcaaaacaatagagagagaaagtaaaaa 35874903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 53786103 - 53786142
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaactttt 264  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  53786103 gagttgtgttatttgaacatccatatatgtgacaactttt 53786142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 338
Target Start/End: Complemental strand, 3316529 - 3316421
Alignment:
Q  233 ttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaat---gagatattgacacaaaaatcaaaacaatagagagaga 329  Q
    |||||||||| ||||| ||  |||||||||||| ||| | ||||| ||||||||  |||    ||| ||||| || ||||| ||||||||||||||||||    
T  3316529 ttatttgaacatccatttagatgacaacttttgagacaatcaaaattttacaaaaaaaaaaaagaggtattggcataaaaaccaaaacaatagagagaga 3316430  T
Q  330 aagtaaaaa 338  Q
    |||||||||    
T  3316429 aagtaaaaa 3316421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 24509272 - 24509394
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    |||||| ||||||||||||||  | || |  |||| || ||||||||| ||||  | ||||||||| |||  ||||| ||||||  ||| ||||| ||||    
T  24509272 taagaggtgtgttatttgaacaactatttgagtgataatttttgtgacaaccactaatttacaaagaaaaatagatagtgacacggaaaccaaaataata 24509371  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| |||||    
T  24509372 gagagagaaagtaaaaaaataat 24509394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 52895358 - 52895292
Alignment:
Q  279 tttacaaaggaaatg-agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||| |||||||||||| ||||||||| ||||||||||| ||| |||||| |||||    
T  52895358 tttacaaagaaaatgtagatattgacacgaaaatcaaagcaatagagagataaaataaaaacataat 52895292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 338
Target Start/End: Original strand, 11672008 - 11672122
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    |||||| |||||||||||||  || || ||| | ||||||||||||||    |||| |||| |||| |||| |  ||||||||||||||||||| |||||    
T  11672008 taagagatgtgttatttgaaaatctatttatattacaacttttgtgacacttaaaattttataaagaaaataaattattgacacaaaaatcaaagcaata 11672107  T
Q  322 gagagagaaagtaaaaa 338  Q
    |||  ||||||||||||    
T  11672108 gag--agaaagtaaaaa 11672122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 31574881 - 31574946
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| |  |||||| |||||||||||| ||||||||||||||| |||||| |||||    
T  31574881 tttacaaagaaaatcatgtattgatacaaaaatcaaagcaatagagagagaaaataaaaatataat 31574946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 51577720 - 51577679
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  51577720 cacaaaaatcaaagcaatagagagagaaagtaaaatgataat 51577679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 1816638 - 1816682
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||    
T  1816638 tgacacaaaaatcaaagcaatagagagataaagtaaaatgataat 1816682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 5386500 - 5386444
Alignment:
Q  281 tacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    ||||||| || | ||||| | |||||||||||||| |||||||||||||||||||||    
T  5386500 tacaaagaaatttagatagtaacacaaaaatcaaagcaatagagagagaaagtaaaa 5386444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 344
Target Start/End: Original strand, 27354261 - 27354361
Alignment:
Q  244 tccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataa 343  Q
    ||||| ||| |||||| ||||  ||| ||||||| ||||||||  ||||||   ||||  ||||||||||||||||| |||||| |||||||||| ||||    
T  27354261 tccatttatatgacaaattttaagacaaccaaaattttacaaaaaaaatgaaggattggtacaaaaatcaaaacaattgagagaaaaagtaaaaacataa 27354360  T
Q  344 t 344  Q
    |    
T  27354361 t 27354361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 344
Target Start/End: Complemental strand, 21025757 - 21025666
Alignment:
Q  253 gtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| ||||  | ||||||||| |||  ||||| | | ||  ||| |||| |||||||||||||||||||||| |||||    
T  21025757 gtgacaacttttgtgacaaccactaatttacaaagaaaagtagatagttatacggaaaccaaagcaatagagagagaaagtaaaaaaataat 21025666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 31559650 - 31559603
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| |||| |||| ||||||||||||||||||||||||||| |||||    
T  31559650 tattaacacgaaaaccaaaacaatagagagagaaagtaaaaatataat 31559603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 44257689 - 44257736
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||| ||||||| ||||||||||||||||||||| |||||    
T  44257689 tattaacacaaatatcaaaataatagagagagaaagtaaaaatataat 44257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 45083149 - 45083086
Alignment:
Q  231 tgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatga 294  Q
    |||||||||||| ||||||||||||||||||||| | || | ||||| |||| |||| ||||||    
T  45083149 tgttatttgaacatccatatatgtgacaacttttattacaatcaaaattttataaagaaaatga 45083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 50890033 - 50890080
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| ||||||||||||| |||||||||||||||| ||||| |||||    
T  50890033 tattggcacaaaaatcaaagcaatagagagagaaagcaaaaatataat 50890080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 51255876 - 51255821
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    ||||||||| || | ||||| || ||||||||||||| ||||||||||||||||||    
T  51255876 tttacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagagaaagta 51255821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 338
Target Start/End: Original strand, 336694 - 336808
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||||||||||||||  |  | | | ||||||||||||  || ||||  | ||| ||||| ||| | | ||||| ||||||||||||| |||||||    
T  336694 agagttgtgttatttgaacaactttttttatgacaacttttgatacaaccattaatttgcaaagaaaaagtggtattggcacaaaaatcaaagcaataga 336793  T
Q  324 gagagaaagtaaaaa 338  Q
    ||||||||| |||||    
T  336794 gagagaaagcaaaaa 336808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 21775259 - 21775341
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaa 336  Q
    |||||| ||||||||| | || || |||| || | |||||| ||||||||||| ||| |||| ||||||||| ||||||||||    
T  21775259 tgacaatttttgtgacaatcataaatttataaggaaaatgaaatattgacacagaaaccaaagcaatagagaaagaaagtaaa 21775341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 25221613 - 25221731
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    |||||||||||||||||  |||| |    ||||||||| | ||| |||| || |||| |||||||| ||  |||||  | ||||| |||||||||||| |    
T  25221613 agttgtgttatttgaacaaccatttgatagacaactttggggacaaccataattttataaaggaaaagatgtattggtataaaaaccaaaacaatagaaa 25221712  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  25221713 gagaaagtaaaaacataat 25221731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 337
Target Start/End: Complemental strand, 27371326 - 27371212
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||| ||||||||||||||  | || ||| ||| ||||| || ||| |||| || ||||||||| |||  || ||||||||  ||||   |||||||||    
T  27371326 aagaggtgtgttatttgaacaacaatttatttgagaacttatgagacaaccataaatttacaaagaaaagtaggtattgacatgaaaactcaaacaatag 27371227  T
Q  323 agagagaaagtaaaa 337  Q
    |||||||||||||||    
T  27371226 agagagaaagtaaaa 27371212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 344
Target Start/End: Complemental strand, 29892031 - 29891909
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||   |||| |   | |||||| ||| ||| |||| || ||||||||  ||| ||| ||| |||| ||||| ||||||||||    
T  29892031 taagagttgtgttatttgaataaccatttgattaacaactattgagacaaccataattttacaaaaaaaaagaggtatagacataaaaaccaaaacaata 29891932  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    || ||||||| |||||| |||||    
T  29891931 gaaagagaaactaaaaacataat 29891909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 38380993 - 38381083
Alignment:
Q  254 tgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||  ||| |||| || || | |||| ||| ||| |||||  |||||||||||| ||||||||||||||| |||||| |||||    
T  38380993 tgacaacttttaagacaaccataatttcataaagaaaaagaggtattggtacaaaaatcaaagcaatagagagagaaaataaaaacataat 38381083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 52204959 - 52204925
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    |||||||||||||||| ||||||||||||||||||    
T  52204959 tgacacaaaaatcaaagcaatagagagagaaagta 52204925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Complemental strand, 8810681 - 8810648
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaag 332  Q
    ||||||| ||||||||||||||||||||||||||    
T  8810681 ttgacacgaaaatcaaaacaatagagagagaaag 8810648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 9393877 - 9393836
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||    
T  9393877 tattgacacaaaaatcaaagcaatagaaagagaaaataaaaa 9393836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 14113573 - 14113614
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  14113573 tattgacacgaaaatcaaagcaatagagagataaagtaaaaa 14113614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 18316046 - 18316009
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  18316046 tgacacaaaaatcaaagcaatagaaagagaaagtaaaa 18316009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 28458337 - 28458378
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  28458337 tattgacacgaaaatcaaagcaatagagagataaagtaaaaa 28458378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 34757874 - 34757915
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    
T  34757874 cacaaaaatcaaatcaatagaaagagaaagtaaaaatataat 34757915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 34759148 - 34759189
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||| ||||||| |||||||||||||| |||||    
T  34759148 cacaaaaatcaaatcaatagaaagagaaagtaaaaatataat 34759189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 35897830 - 35897765
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| | ||||||  ||||||||||||||||||| ||||||| | | |||||||||| |||||    
T  35897830 tttacaatgaaaatgaagtattgacacaaaaatcaaagcaatagaaataaaaagtaaaaacataat 35897765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 36123425 - 36123466
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||  ||||||||||||||||||||| |||||    
T  36123425 cacaaaaatcaaagtaatagagagagaaagtaaaaatataat 36123466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 42491257 - 42491160
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||||||||||||||  |||| |   |||||||||||| ||| |||| || || |||||| ||| ||| ||||| |||||||| |||| ||||||    
T  42491257 gagttgtgttatttgaacaaccatttgattgacaacttttgggacaaccataatttcacaaagaaaaagaggtattggcacaaaaaccaaagcaatag 42491160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 48796492 - 48796533
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  48796492 tattgacacaaatatcaaagcaaaagagagagaaagtaaaaa 48796533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 49896626 - 49896667
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  49896626 tattgacacgaaaatcaaagcaatagagagataaagtaaaaa 49896667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 5932726 - 5932770
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||| ||||| | ||||| ||||||    
T  5932726 tgacacaaaaatcaaaacaatagatagagacactaaaaggataat 5932770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 19174661 - 19174781
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||| ||||||||||||||  |||  | |||||||||||||| ||| | || || ||||||||| |||| || |||  |||| |||||||||| |||| |    
T  19174661 agagatgtgttatttgaacaaccaattgtgtgacaacttttgagacaaacataaatttacaaagaaaattaggtatcaacacgaaaatcaaaataatata 19174760  T
Q  324 gagagaaagtaaaaagataat 344  Q
     ||||||| ||| || |||||    
T  19174761 aagagaaattaataatataat 19174781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 24045354 - 24045309
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||| |||||||  ||||||||||||| |||||    
T  24045354 tattgacacaaaaatcaaagcaataga--gagaaagtaaaaacataat 24045309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 38338888 - 38338924
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaag 339  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  38338888 cacaaaaatcaaagcaatagagagataaagtaaaaag 38338924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 331
Target Start/End: Original strand, 42395979 - 42396031
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaa 331  Q
    ||||||||  ||||||| ||||  ||||||||||||| |||||||||||||||    
T  42395979 tttacaaaaaaaatgaggtatttgcacaaaaatcaaagcaatagagagagaaa 42396031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 76505 - 76626
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| |||| ||||||    
T  76505 aagagttgtgttattttaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaatag 76604  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||||||||| ||||||||||    
T  76605 agagagaaagtgaaaagataat 76626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 12898815 - 12898936
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||| || | |||||| |||| ||||||    
T  12898815 aagagttatgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcgcaaaaaccaaagcaatag 12898914  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||||| ||||||||||||||||    
T  12898915 agagataaagtaaaaagataat 12898936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 341
Target Start/End: Complemental strand, 27325946 - 27325825
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||  | ||||| ||||||||||||||||| || || |||||||| |||| |||    
T  27325946 tttaagagttgtgttatttgaacatccatatatgtgacaactttcgtgataatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaa 27325847  T
Q  320 tagagagagaaagtaaaaagat 341  Q
    ||||||||||||||||||||||    
T  27325846 tagagagagaaagtaaaaagat 27325825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 11253429 - 11253549
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||| |||||||||| || ||| || |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||| |||||||    
T  11253429 agagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaataga 11253528  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||||||| ||||||||||||    
T  11253529 gagagaaaataaaaagataat 11253549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 4054174 - 4054293
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |  ||||||||||||||||||||||| | |||||||||||||| |||||||| || ||||||||||| |||| ||||| ||    
T  4054174 gagttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaactttacaaatgaaatgaggtagtgacacaaaaaccaaagcaataaag 4054273  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  4054274 agagaaagtaaaaagataat 4054293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 37133748 - 37133869
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||| ||| ||||| ||  |||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||||||| ||||||    
T  37133748 aagagttgtgttattttaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagcaatag 37133847  T
Q  323 agagagaaagtaaaaagataat 344  Q
    | |||||||||||||| |||||    
T  37133848 aaagagaaagtaaaaacataat 37133869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 32501087 - 32501203
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| ||||||||||||| || ||||||||| ||||||| ||||||||||||||||| || ||||||||||||||||  ||||||||||    
T  32501087 ttgtgttatttgaacatccatatatgtgagaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagtaatagagaga 32501186  T
Q  328 gaaagtaaaaagataat 344  Q
    ||| ||||||| |||||    
T  32501187 gaacgtaaaaaaataat 32501203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 34186791 - 34186671
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| | ||||| ||| ||||||||||||| || ||||||||||| ||||  ||||||    
T  34186791 agagttgtgttatttgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagtaataga 34186692  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||||||| ||||||||||||    
T  34186691 gagagaaaataaaaagataat 34186671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 22719623 - 22719504
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||||||||  ||||||||||||||||||||||||  ||||||| ||||||||| ||||||| || |  |||||||| |||| ||||||||    
T  22719623 gagttgtgttatttgaacagccatatatgtgacaacttttgtgataaccaaaattttacaaagaaaatgaggtagttgcacaaaaaccaaagcaatagag 22719524  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||    
T  22719523 agagaaagtaaaaagataat 22719504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 221 - 344
Target Start/End: Original strand, 36660334 - 36660457
Alignment:
Q  221 ttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaat 320  Q
    |||| ||||||||||||||||| |||||| |||||| |||||||||||| | ||||| |||| |||| ||||||  ||||||||||| || |||| ||||    
T  36660334 ttaatagttgtgttatttgaacatccataaatgtgataacttttgtgacaatcaaaattttataaagaaaatgaagtattgacacaataaccaaagcaat 36660433  T
Q  321 agagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||||||||    
T  36660434 agagagagaaagtaaaaagataat 36660457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 224 - 338
Target Start/End: Complemental strand, 29025444 - 29025330
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    ||||||||||||||| ||| ||||| ||| |||||||||||| ||| ||||||| ||||||||| ||||||| |||||||||||||| |||| |||||||    
T  29025444 agagttgtgttatttaaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaataga 29025345  T
Q  324 gagagaaagtaaaaa 338  Q
    ||||||| |||||||    
T  29025344 gagagaaggtaaaaa 29025330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 37449311 - 37449432
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||  | ||||| ||||||||||||||||| || |  |||||||| |||| ||||||    
T  37449311 aagagttgtgttatttgaatatccatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtagcacaaaaaccaaagcaatag 37449410  T
Q  323 agagagaaagtaaaaagataat 344  Q
    ||| ||||||||||||||||||    
T  37449411 agacagaaagtaaaaagataat 37449432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 36816507 - 36816623
Alignment:
Q  228 ttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagaga 327  Q
    ||||||||||||||| || ||||||||||||||||||||||  | ||||| ||| ||||| ||||||  |||| |||||||||||||| |||||||||||    
T  36816507 ttgtgttatttgaacatctatatatgtgacaacttttgtgataatcaaaattttgcaaagaaaatgacgtattaacacaaaaatcaaagcaatagagaga 36816606  T
Q  328 gaaagtaaaaagataat 344  Q
     ||||||||||||||||    
T  36816607 aaaagtaaaaagataat 36816623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 344
Target Start/End: Original strand, 5277393 - 5277506
Alignment:
Q  231 tgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaa 330  Q
    |||||||||||| |||||| ||||||||| || |||||| | ||||| ||||||||||||||||| || |||||||||||   || ||||||||||||||    
T  5277393 tgttatttgaacatccatacatgtgacaatttatgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaacttaagcaatagagagagaa 5277492  T
Q  331 agtaaaaagataat 344  Q
    ||||||||||||||    
T  5277493 agtaaaaagataat 5277506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 43397966 - 43397845
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||| ||||||| |||||| |||||| |||||||| |||||||||| ||||||| ||||||||| |||||||||| || |||||||| ||||  |||||    
T  43397966 aagagatgtgttaattgaacatccatacatgtgacagcttttgtgacaaccaaaattttacaaagaaaatgagatagtggcacaaaaaccaaagtaatag 43397867  T
Q  323 agagagaaagtaaaaagataat 344  Q
    | |||||||||||||| |||||    
T  43397866 aaagagaaagtaaaaaaataat 43397845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 225 - 329
Target Start/End: Complemental strand, 7272033 - 7271929
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| | ||||| ||| |||| ||||||||||| ||||||||||| |||| ||||||||    
T  7272033 gagttgtgttatatgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaagaaatgagatagtgacacaaaaaccaaagcaatagag 7271934  T
Q  325 agaga 329  Q
    |||||    
T  7271933 agaga 7271929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 42768387 - 42768270
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| ||||||||||||| || ||||||||| || |||| |||||||||||||||||  | ||||||||||| |||| |||||||     
T  42768387 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaactaaaattttacaaaggaaatgaggcagtgacacaaaaaccaaagcaataga- 42768289  T
Q  325 agagaaagtaaaaagataat 344  Q
     ||||||||||||| |||||    
T  42768288 -gagaaagtaaaaaaataat 42768270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 36251503 - 36251395
Alignment:
Q  231 tgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaa 330  Q
    |||||||||||| ||||||||||||| |||||| ||||| | ||||| ||||||||||||||||| || |||||| |||| ||||  |||||||||||||    
T  36251503 tgttatttgaacatccatatatgtgataactttcgtgacaatcaaaattttacaaaggaaatgaggtagtgacac-aaaaccaaagtaatagagagagaa 36251405  T
Q  331 agtaaaaaga 340  Q
    ||||||||||    
T  36251404 agtaaaaaga 36251395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 10731690 - 10731610
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| | ||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10731690 tgtgacaatcaaaattttacaaaggaaatgaagtattgacacaaaaatcaaagcaatagagagagaaagtaaaaagataat 10731610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 343
Target Start/End: Complemental strand, 13106665 - 13106545
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    ||||||||||||||||||||  |||| || |||||||||||| | || |||| || ||||||||| ||| ||| |||||||||||||| |||| ||||||    
T  13106665 aagagttgtgttatttgaacaaccatttaggtgacaacttttataacaaccataaatttacaaagaaaaagaggtattgacacaaaaagcaaagcaatag 13106566  T
Q  323 agagagaaagtaaaaagataa 343  Q
    |||||||||| ||||| ||||    
T  13106565 agagagaaagcaaaaatataa 13106545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 24479407 - 24479323
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaa 308  Q
    ||||||||||||||||| | | ||||||| ||| |||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  24479407 agagttgtgttatttgagcattcatatatatgataacttttgtgacaactaaaattttacaaaggaaatgagatattgacacaaa 24479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 31249421 - 31249531
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    ||||||||||||||||||||| |||||||||||||||||            ||||| ||||||||||||||||| || ||  ||||||| |||| |||||    
T  31249421 taagagttgtgttatttgaacatccatatatgtgacaac------------caaaattttacaaaggaaatgaggtagtggtacaaaaaccaaagcaata 31249508  T
Q  322 gagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||||    
T  31249509 gagagagaaagtaaaaagataat 31249531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 10839365 - 10839489
Alignment:
Q  220 tttaagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaa 319  Q
    ||||||||| ||||||||||||| ||||| | | ||| || ||||| ||| || |||| ||||||||| |||| | |||||| |||||||| |||| |||    
T  10839365 tttaagagtagtgttatttgaacatccatttttatgataatttttgagacaactaaaattttacaaagaaaattaaatattggcacaaaaaccaaagcaa 10839464  T
Q  320 tagagagagaaagtaaaaagataat 344  Q
    |||| |||||||||||||| |||||    
T  10839465 tagatagagaaagtaaaaacataat 10839489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 5740673 - 5740792
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||||||||||||||||  |||| |    ||||||||||  ||| |||| || ||||||||| ||| ||| ||| |||||||||| |||||||||||||    
T  5740673 gagttgtgttatttgaacagccattttatagacaacttttaggacaaccataattttacaaagaaaaagaggtatcgacacaaaaaccaaaacaatagag 5740772  T
Q  325 agagaaagtaaaaagataat 344  Q
    |||||||||||||| |||||    
T  5740773 agagaaagtaaaaacataat 5740792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 10692615 - 10692503
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||| |||||||||| |||||||||||| |||||| | |||| | ||||| ||||||||||        || || |||||||| ||||||||||||    
T  10692615 agagttgtattatttgaacatccatatatgtgtcaacttctctgacaatcaaaattttacaaagg--------tagtggcacaaaaaccaaaacaataga 10692524  T
Q  324 gagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||    
T  10692523 gagagaaagtaaaaagataat 10692503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 23754594 - 23754713
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |   | ||| ||||||| ||||  || ||||||| ||||||||| |||||||  ||||||||||||| ||||||||||| |    
T  23754594 gagttgtgttatttgaacattattttatatgacaacctttgcaacaaccaaaattttacaaagaaaatgagtgattgacacaaaaaccaaaacaatagtg 23754693  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||| |||||||||| |||||    
T  23754694 agataaagtaaaaatataat 23754713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 10902884 - 10902769
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||  ||||| ||  |||||| ||||||||      ||| ||||||||| ||||||  ||||| ||||||||||||| ||||||    
T  10902884 aagagttgtgttatttgaatatccatttagatgacaatttttgtga------aaattttacaaagaaaatgatgtattggcacaaaaatcaaagcaatag 10902791  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||||||||||| |||||    
T  10902790 agagagaaagtaaaaacataat 10902769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 45405661 - 45405596
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||| | |||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  45405661 tttacaaagaaaatcatatattgacacgaaaatcaaagcaatagagagagaaagtaaaaatataat 45405596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 7598891 - 7598773
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| | ||  ||| ||| |||||||| ||| ||||||| |||||| || |||| || |||||||| ||||| |||||||||| |     
T  7598891 gagttgtgttatttgaacattcaattatatgaaaacttttgagacaaccaaaa-tttacatagaaaataaggtattgacataaaaaccaaaacaatatat 7598793  T
Q  325 agagaaagtaaaaagataat 344  Q
     ||||||||||||| |||||    
T  7598792 tgagaaagtaaaaacataat 7598773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 6445291 - 6445247
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  6445291 agatattaacacaaaaatcaaaacaatagagagataaagtaaaaa 6445247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 24798304 - 24798364
Alignment:
Q  284 aaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||| |||||||||| | |||||||||||||||||| |||||||||||||| |||||    
T  24798304 aaagaaaaagagatattgatataaaaatcaaaacaatagaaagagaaagtaaaaatataat 24798364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 27854705 - 27854773
Alignment:
Q  274 aaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||||| |||| | |||||| ||||||||||||||||||  |||||||||||||||| |||||    
T  27854705 aaaattttacaaagaaaattaaatattggcacaaaaatcaaaacaat--agagagaaagtaaaaacataat 27854773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 21526165 - 21526287
Alignment:
Q  223 aagagttgtgttatttgaacgtccatat-atgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    |||||||||||||||| |||  |||| | || |||||||||||| ||| |||| || || |||||| ||| ||| ||||| |||||||  |||| ||| |    
T  21526165 aagagttgtgttatttaaacaaccatttgatttgacaacttttgggacaaccataatttcacaaagaaaaagaggtattggcacaaaatccaaagcaaca 21526264  T
Q  322 gagagagaaagtaaaaagataat 344  Q
     |||||||||||||||| |||||    
T  21526265 aagagagaaagtaaaaacataat 21526287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 34873966 - 34873901
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||  ||||| ||||||  ||| |||| |||||||||||||||||||||| |||||    
T  34873966 tttacaaaggaaagtagatactgacacggaaaccaaagcaatagagagagaaagtaaaaaaataat 34873901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 39211153 - 39211112
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  39211153 tattgacacaaaaaccaaaacaatagagagaaaaagtaaaaa 39211112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 39856152 - 39856115
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaa 331  Q
    |||||||||||||||||||||| |||||||||||||||    
T  39856152 agatattgacacaaaaatcaaagcaatagagagagaaa 39856115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 2621898 - 2621850
Alignment:
Q  296 atattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| |||| |||||||||||||||||| ||||||||||||| |||||    
T  2621898 atattaacacgaaaatcaaaacaatagagtgagaaagtaaaaatataat 2621850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 10592243 - 10592287
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||    
T  10592243 tgacacaaaaaccaaagcaatagagagagaaagtaaaaacataat 10592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 11134705 - 11134661
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||    
T  11134705 tgacacaaaaatcaaaataatagagagagaaagtagaaaaataat 11134661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 37942865 - 37942913
Alignment:
Q  296 atattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||||  |||||||||||||||||||||||||| |||||    
T  37942865 atattgacataaaaactaaaacaatagagagagaaagtaaaaatataat 37942913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 45405948 - 45405980
Alignment:
Q  302 acacaaaaatcaaaacaatagagagagaaagta 334  Q
    |||||||||||||||||||||||||||||||||    
T  45405948 acacaaaaatcaaaacaatagagagagaaagta 45405980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 2883322 - 2883267
Alignment:
Q  274 aaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagaga 329  Q
    |||| ||||||||| ||||||  |||| |||||||||||||||||| |||||||||    
T  2883322 aaaattttacaaagaaaatgaagtattaacacaaaaatcaaaacaaaagagagaga 2883267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 5574367 - 5574320
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||| ||||||||||||||| |||||||| |||||||||||| |||||    
T  5574367 tattaacacaaaaatcaaaataatagagaaagaaagtaaaaatataat 5574320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 6440193 - 6440146
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||||| ||| | |||||||||||||||| |||||    
T  6440193 tattgacacaaaaatcaaagcaagaaagagagaaagtaaaaatataat 6440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 44061845 - 44061782
Alignment:
Q  281 tacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| || | ||||| |||||||||||||||| ||| ||| ||||||||||||| ||||||    
T  44061845 tacaaagaaatttagatagtgacacaaaaatcaaagcaacagaaagagaaagtaaaatgataat 44061782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 2730917 - 2730967
Alignment:
Q  294 agatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||| || ||||||||||||| || | |||||||||||||||||||||||    
T  2730917 agatagtggcacaaaaatcaaagcagttgagagagaaagtaaaaagataat 2730967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 22811479 - 22811517
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  22811479 tgacacataaatcaaaacaataaagagagaaagtaaaaa 22811517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 44090995 - 44090961
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    |||||||||||||||| ||||||||||||||||||    
T  44090995 tgacacaaaaatcaaagcaatagagagagaaagta 44090961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 12284229 - 12284270
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||| |||||||| |||||||||| ||||||||||||||||    
T  12284229 tattgtcacaaaaaccaaaacaataaagagagaaagtaaaaa 12284270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 32133505 - 32133392
Alignment:
Q  226 agttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga 325  Q
    ||||||||||||||||| ||||| ||| ||| || ||||| ||  ||||||| ||||||||  |||| || |||||||||   |  |||||||||  |||    
T  32133505 agttgtgttatttgaacatccatttatatgataaattttgagataaccaaaattttacaaataaaataaggtattgacac---atccaaaacaat--aga 32133411  T
Q  326 gagaaagtaaaaagataat 344  Q
    ||||||||||||| |||||    
T  32133410 gagaaagtaaaaacataat 32133392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 33279514 - 33279555
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||| || |||||||||||||||||||||||| |||||    
T  33279514 cacaaaaaccagaacaatagagagagaaagtaaaaatataat 33279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 35067266 - 35067225
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||| |||| |||||||||||||||||||||| |||||    
T  35067266 cacaaaaaccaaagcaatagagagagaaagtaaaaatataat 35067225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 37754691 - 37754626
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||  || ||||| |||  ||| ||||||||||||||||||||||||||| |||||    
T  37754691 tttacaaagaaaaataggtattggcacggaaaccaaaacaatagagagagaaagtaaaaacataat 37754626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 338
Target Start/End: Complemental strand, 38585513 - 38585472
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||| |||||||||||| || ||||||||||||||    
T  38585513 tattgacacaagaatcaaaacaattgaaagagaaagtaaaaa 38585472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 38958493 - 38958558
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| ||||||| |||  ||||||||| |||| ||||| | |||||||||||||| |||||    
T  38958493 tttacaaagaaaatgaggtatgaacacaaaaaccaaagcaataaaaagagaaagtaaaaacataat 38958558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 40517387 - 40517322
Alignment:
Q  279 tttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||||| |||  |||||||||||| ||||||||| ||||||| ||| ||| |||||| |||||    
T  40517387 tttacaaagaaaagtagatattgacacgaaaatcaaagcaatagaaagataaaataaaaacataat 40517322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 4312660 - 4312620
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    |||||||||||||||||||||||| | |||| |||||||||    
T  4312660 tattgacacaaaaatcaaaacaatggtgagaaaaagtaaaa 4312620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 168
Target Start/End: Original strand, 8547337 - 8547397
Alignment:
Q  109 agaagctaaaatagaatatattac-caaaacaatgtgacttttctagcacaagatgtacta 168  Q
    |||||||||||||||||||||||| ||||||||||    ||| |||||||||| |||||||    
T  8547337 agaagctaaaatagaatatattactcaaaacaatgaatatttcctagcacaaggtgtacta 8547397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 8671514 - 8671562
Alignment:
Q  296 atattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| ||||||||||||  |||||||||| |||||||||| |||||    
T  8671514 atattgatacaaaaatcaaagtaatagagagataaagtaaaaatataat 8671562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 11584206 - 11584170
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaagtaa 335  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  11584206 ttgacacgaaaaccaaaacaatagagagagaaagtaa 11584170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 25987749 - 25987793
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||| ||||||||||| |||||| || ||||||    
T  25987749 tgacacaaaaatcaaagcaatagagagataaagtagaatgataat 25987793  T

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Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 31597053 - 31597017
Alignment:
Q  303 cacaaaaatcaaaacaatagagagagaaagtaaaaag 339  Q
    |||||||| |||||||||||||||| |||||||||||    
T  31597053 cacaaaaaccaaaacaatagagagataaagtaaaaag 31597017  T

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Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 34639717 - 34639605
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||| |||||||||||| ||||| ||  ||| || ||||| ||  | ||||| ||||||||  ||||||| || |||||||| || ||||  ||||||    
T  34639717 agagttatgttatttgaacatccatttacatgataatttttgagagaatcaaaattttacaaataaaatgaggtagtgacacaataaccaaagtaataga 34639618  T
Q  324 gagagaaagtaaa 336  Q
    |||||||| ||||    
T  34639617 gagagaaaataaa 34639605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 41639759 - 41639806
Alignment:
Q  299 ttgacacaaaaatcaaaacaat--agagagagaaagtaaaaagataat 344  Q
    ||||||||||||||||| ||||  |||||||||||||||||| |||||    
T  41639759 ttgacacaaaaatcaaagcaatagagagagagaaagtaaaaatataat 41639806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 44064467 - 44064435
Alignment:
Q  299 ttgacacaaaaatcaaaacaatagagagagaaa 331  Q
    ||||||||||||||||| |||||||||||||||    
T  44064467 ttgacacaaaaatcaaagcaatagagagagaaa 44064435  T

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Target: scaffold0098 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 49478 - 49359
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    ||||| |||||||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||| || ||||||||||| ||||| |||||||    
T  49478 gagttatgttatttgaacatccatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaaataatagag 49379  T
Q  325 agagaaagtaaaaagataat 344  Q
     |||||||||||||||||||    
T  49378 tgagaaagtaaaaagataat 49359  T

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Target: scaffold0199 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 8853 - 8732
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||| ||||||||||||||||| || ||||||||||| |||| ||| ||    
T  8853 aagagttgtgttatttgaacatccatatatctgacaacttttatgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaacag 8754  T
Q  323 agagagaaagtaaaaagataat 344  Q
    |||||||| |||||||||||||    
T  8753 agagagaacgtaaaaagataat 8732  T

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Target: scaffold0519 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 340
Target Start/End: Complemental strand, 11966 - 11850
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||||| |||||||||| || ||| || |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||| |||||||    
T  11966 agagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaataga 11867  T
Q  324 gagagaaagtaaaaaga 340  Q
    |||||||| ||||||||    
T  11866 gagagaaaataaaaaga 11850  T

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Target: scaffold0087 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 53249 - 53368
Alignment:
Q  225 gagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagag 324  Q
    |||||||||||||||||| |  || ||| ||| || ||||  ||| ||||||| |||| |||| ||||||||||||||||||||||  ||||||| ||||    
T  53249 gagttgtgttatttgaacatttatttatatgataagtttttagacaaccaaaaatttataaagaaaatgagatattgacacaaaaactaaaacaaaagag 53348  T
Q  325 agagaaagtaaaaagataat 344  Q
    ||||||| |||||| |||||    
T  53349 agagaaaataaaaacataat 53368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 24490 - 24545
Alignment:
Q  289 aaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||||||||||||||||||  |||| || |||||||||||| |||||| |||||    
T  24490 aaatgagatattgacacaaaatccaaagcagtagagagagaaaataaaaatataat 24545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 10890 - 10970
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    |||||| | ||||| |||| |||| ||||||| || | ||||||||||||||| |||||||||||||||||||||||||||    
T  10890 tgtgacaatcaaaattttataaagaaaatgaggtagtaacacaaaaatcaaaataatagagagagaaagtaaaaagataat 10970  T

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Target: scaffold0067 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 35667 - 35585
Alignment:
Q  264 tgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagaga--gagaaagtaaaaagataat 344  Q
    |||||| | ||||| ||||||||| ||||||| || ||||||||||| |||| |||||||||  |||||||||||||||||||    
T  35667 tgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaagcaatagagagagagaaagtaaaaagataat 35585  T

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Target: scaffold0184 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 16676 - 16794
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||| |||||||||||| ||||| ||| |||||||||||  ||| | ||| | ||||||||| ||||||| |||||  |||||||  ||| ||||| |    
T  16676 agagttctgttatttgaacatccatttatatgacaacttttaagacaatcaaca-tttacaaagaaaatgaggtattggtacaaaaactaaagcaata-a 16773  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||| |||||||||    
T  16774 gagagaaagtataaagataat 16794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 56168 - 56050
Alignment:
Q  224 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaataga 323  Q
    |||||| |||||||||||| ||||| ||| |||||||||||  ||| | ||| | ||||||||| ||||||| |||||  |||||||  ||| ||||| |    
T  56168 agagttctgttatttgaacatccatttatatgacaacttttaagacaatcaaca-tttacaaagaaaatgaggtattggtacaaaaactaaagcaata-a 56071  T
Q  324 gagagaaagtaaaaagataat 344  Q
    ||||||||||| |||||||||    
T  56070 gagagaaagtataaagataat 56050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 7013 - 6928
Alignment:
Q  253 gtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaa 338  Q
    ||||||||||||||||| || |  | |||||||||||||  ||||| ||||||  ||| ||||  |||||||||||||||||||||    
T  7013 gtgacaacttttgtgacaactactaatttacaaaggaaagtagatagtgacacggaaaccaaattaatagagagagaaagtaaaaa 6928  T

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Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 20787 - 20908
Alignment:
Q  223 aagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatag 322  Q
    |||||||||||||||||||| ||||| ||  ||| || ||||||||  | ||||| ||| ||| | |||| |  |||||  | |||||||||| ||||||    
T  20787 aagagttgtgttatttgaacatccatttaaatgataatttttgtgataatcaaaattttgcaaggaaaattatgtattggtagaaaaatcaaagcaatag 20886  T
Q  323 agagagaaagtaaaaagataat 344  Q
    | |||||||||||||| |||||    
T  20887 aaagagaaagtaaaaacataat 20908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 72940 - 73061
Alignment:
Q  222 taagagttgtgttatttgaacgtccatatatgtgacaacttttgtgacgaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaaacaata 321  Q
    |||||| ||||||||||| ||  |||| |  |||| ||||||||| || ||||  | |||||||||||||  ||||| ||||||  ||| |||||  |||    
T  72940 taagaggtgtgttatttgcacaaccatttgagtgataacttttgtaacaaccactaatttacaaaggaaaatagatagtgacacggaaaccaaaatgata 73039  T
Q  322 gagagagaaagtaaaaagataa 343  Q
    ||||||||||||||||| ||||    
T  73040 gagagagaaagtaaaaaaataa 73061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 8951 - 8911
Alignment:
Q  297 tattgacacaaaaatcaaaacaatagagagagaaagtaaaa 337  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  8951 tattgacacaaaaatcatagcaatagagagagaaagtaaaa 8911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 6457 - 6516
Alignment:
Q  275 aaactttacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    ||||| |||||||| | | ||||| ||||||||||||||||  |||||||||||||||||    
T  6457 aaactatacaaagggatttagatagtgacacaaaaatcaaagtaatagagagagaaagta 6516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 1772 - 1709
Alignment:
Q  281 tacaaaggaaatgagatattgacacaaaaatcaaaacaatagagagagaaagtaaaaagataat 344  Q
    ||||||| || | ||||| || ||||||||||||| ||||| ||||||||||||||| ||||||    
T  1772 tacaaagaaatttagatagtggcacaaaaatcaaagcaataaagagagaaagtaaaatgataat 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Original strand, 8915 - 8949
Alignment:
Q  300 tgacacaaaaatcaaaacaatagagagagaaagta 334  Q
    |||||||||||||||| ||||||||||||||||||    
T  8915 tgacacaaaaatcaaagcaatagagagagaaagta 8949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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