View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3884_low_15 (Length: 252)
Name: NF3884_low_15
Description: NF3884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3884_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 46425049 - 46425277
Alignment:
| Q |
1 |
aaaacaataagctatcattctaaatgttctcacacacttcaaaatgattaaaattcctctattggtggttaagtatcgttgaggtattagagaggccatt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| |||| |||||||||||||||||| ||| |
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| T |
46425049 |
aaaacaataagctatcattctaaatgttctcacacacttcaaaatgattaaaattcctccattgatagttaactatcattgaggtattagagaggctatt |
46425148 |
T |
|
| Q |
101 |
ttgaggcgtggaagagcaattttgctagtgacaagagtaattttcttctgcctggatgtattaggctgccttacctttttagcgagtggtgagtttgggc |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46425149 |
ttgaggcgtggaagagcaattttgctagtgagaagagtaattttcttctgcctggatgtattaggctgccttacctttttagcgagtggtgagtttgggc |
46425248 |
T |
|
| Q |
201 |
ttgtgcccagcagtaaggaacggctttcg |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
46425249 |
ttgtgcccagcagtaaggaacggctttcg |
46425277 |
T |
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