View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3887_high_7 (Length: 249)
Name: NF3887_high_7
Description: NF3887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3887_high_7 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 29)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 4682199 - 4682439
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaatgataaaaccaaatctaaattattttctttca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4682199 |
atatcatcttccatatcaaagctcactatgttacagtacttgtgagttcctaatctcatttggttaaatgataaaaccaaatctaaattattttctttca |
4682298 |
T |
 |
| Q |
101 |
gggatttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttct |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4682299 |
gggatttattagagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaatggttctttacctgattttct |
4682398 |
T |
 |
| Q |
201 |
gatgcaactgcgttcactaaaagtcttgtaagtcctatgtt |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4682399 |
gatgcaactgcgttcactaaaagtcttgtaagtcctatgtt |
4682439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 4690082 - 4690212
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatg |
204 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
4690082 |
tttattggagattcaaaattgtaactctgaatttacattgttttctttcagggatttatcaaacaatagcttaaacggtcctatacctgattttctgatt |
4690181 |
T |
 |
| Q |
205 |
caactgcgttcactaaaagtcttgtaagtcc |
235 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |
|
|
| T |
4690182 |
caactgcggtcactaaaagtcttgtaagtcc |
4690212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 105 - 234
Target Start/End: Complemental strand, 4775373 - 4775244
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatg |
204 |
Q |
| |
|
|||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4775373 |
tttattggggattcaaatttgtaactctacatttaaattgttttctttcagggatttgtcaaacaatagcttaaacggtcctttacctgattttctgata |
4775274 |
T |
 |
| Q |
205 |
caactgcgttcactaaaagtcttgtaagtc |
234 |
Q |
| |
|
||||| || |||||| |||||||||||||| |
|
|
| T |
4775273 |
caacttcggtcactacaagtcttgtaagtc |
4775244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 4727302 - 4727438
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatg |
204 |
Q |
| |
|
|||||||| ||||||||||||||| | | |||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
4727302 |
tttattggcaattcaaaattgtaacactgtatttaaattgttttctttcagggatttatcaaacaatagcttgaacggtcctttacctgattttctgatg |
4727401 |
T |
 |
| Q |
205 |
caactgcgttcactaaaagtcttgtaagtcctatgtt |
241 |
Q |
| |
|
|| ||| | ||||||||| |||||||||||| ||||| |
|
|
| T |
4727402 |
cagctgaggtcactaaaaatcttgtaagtcccatgtt |
4727438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 133 - 240
Target Start/End: Original strand, 10448507 - 10448614
Alignment:
| Q |
133 |
gcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatgcaactgcgttcactaaaagtcttgtaag |
232 |
Q |
| |
|
|||| ||||||| || ||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10448507 |
gcatataaattgtttcctttcagggatttatcaaacaatagtttaaagggttccttacctgattttctgatgcaactgcggtcactaaaagtcttgtaag |
10448606 |
T |
 |
| Q |
233 |
tcctatgt |
240 |
Q |
| |
|
|||||||| |
|
|
| T |
10448607 |
tcctatgt |
10448614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 4704616 - 4704752
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatg |
204 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4704616 |
tttattggggattcaaaattgtaactccgtatttttttttctttctttcagggatttatcaaacaatagcttaaacggccctttacctgattttctgaca |
4704715 |
T |
 |
| Q |
205 |
caactgcgttcactaaaagtcttgtaagtcctatgtt |
241 |
Q |
| |
|
|||||||| || |||||||||||||| |||| ||||| |
|
|
| T |
4704716 |
caactgcggtctctaaaagtcttgtatgtcccatgtt |
4704752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 4737881 - 4738017
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatg |
204 |
Q |
| |
|
|||||||| | |||||||||||||||| | ||||||||| || |||||||||||||||||||||||||||| || ||| |||||||||||||||||||| |
|
|
| T |
4737881 |
tttattgggggttcaaaattgtaactctgtgtttaaattgtttactttcagggatttatcaaacaatagcttgaatggtcctttacctgattttctgatg |
4737980 |
T |
 |
| Q |
205 |
caactgcgttcactaaaagtcttgtaagtcctatgtt |
241 |
Q |
| |
|
|| ||| | ||||||||| | |||||||||| ||||| |
|
|
| T |
4737981 |
cagctgaggtcactaaaaatattgtaagtcccatgtt |
4738017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 4922355 - 4922229
Alignment:
| Q |
108 |
attggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatgcaa |
207 |
Q |
| |
|
|||| ||||||||||||||||||| |||| ||||||| || |||||||||||||||||||||||||||| | || || ||||||||||||||||| ||| |
|
|
| T |
4922355 |
attgaagattcaaaattgtaactctgcatataaattg-ttcatttcagggatttatcaaacaatagcttacagggatccttacctgattttctgatacaa |
4922257 |
T |
 |
| Q |
208 |
ctgcgttcactaaaagtcttgtaagtcc |
235 |
Q |
| |
|
|||| |||||||||||||||||||||| |
|
|
| T |
4922256 |
ctgcagtcactaaaagtcttgtaagtcc |
4922229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 4889043 - 4888952
Alignment:
| Q |
149 |
ctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatgcaactgcgttcactaaaagtcttgtaagtcctatgt |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |
|
|
| T |
4889043 |
ctttcagggatttatcaaacaatagcttaagcggtcccttacctgattttctgatgcaactgcgatcattaaaagtcttgtaagtcccatgt |
4888952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 4716723 - 4716858
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatg |
204 |
Q |
| |
|
|||||||| | |||| ||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
4716723 |
tttattgggggttcacaattgtaactctttaattaaattt-tttctttcagggatttatcaaacaatagcttaaacggcccattacctgattttctgatg |
4716821 |
T |
 |
| Q |
205 |
caactgcgttcactaaaagtcttgtaagtcctatgtt |
241 |
Q |
| |
|
|||||||| || || ||||||||||| |||| ||||| |
|
|
| T |
4716822 |
caactgcggtctctgaaagtcttgtatgtcccatgtt |
4716858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 4874359 - 4874223
Alignment:
| Q |
104 |
atttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgat |
203 |
Q |
| |
|
||||| || |||||||||||||||||| |||||| |||| || ||||||||||||||||||||||||| ||||||||| | |||||||| | | |||| |
|
|
| T |
4874359 |
atttaatgtagattcaaaattgtaactatgcatttccattgtttcctttcagggatttatcaaacaatagtttaaacggtcccttacctgactctttgat |
4874260 |
T |
 |
| Q |
204 |
gcaactgcgttcactaaaagtcttgtaagtcctatgt |
240 |
Q |
| |
|
|||||||| ||| |||||||||||||||||| |||| |
|
|
| T |
4874259 |
gcaactgcaatcattaaaagtcttgtaagtcccatgt |
4874223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 4900089 - 4899954
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatg |
204 |
Q |
| |
|
||||||||||||| |||||| |||| | ||||||||||| | ||||||| ||||||| |||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
4900089 |
tttattggagatttaaaattttaacactgcatttaaattctatcctttcagaaatttatctaacaatagcttaaacggtccat-acctgattttctgatg |
4899991 |
T |
 |
| Q |
205 |
caactgcgttcactaaaagtcttgtaagtcctatgtt |
241 |
Q |
| |
|
||||| || || ||||||||||||||||||| ||||| |
|
|
| T |
4899990 |
caactacgatcgctaaaagtcttgtaagtcccatgtt |
4899954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4997198 - 4997265
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaa |
68 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4997198 |
atatcatcttctatatcaaagctctctatgttacagtacttgtgagttcctaatctcatttggttaaa |
4997265 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 4912571 - 4912469
Alignment:
| Q |
133 |
gcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatgcaactgcgttcactaaaagtcttgtaag |
232 |
Q |
| |
|
||||||||||| || ||||||| |||||||||||||||||| |||| ||| | |||||||||||||||| |||| |||| ||||||||||||||||||| |
|
|
| T |
4912571 |
gcatttaaattctttcctttcagagatttatcaaacaatagcctaaatggtcccttacctgattttctgacgcaaatgcgatcactaaaagtcttgtaag |
4912472 |
T |
 |
| Q |
233 |
tcc |
235 |
Q |
| |
|
||| |
|
|
| T |
4912471 |
tcc |
4912469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 235
Target Start/End: Complemental strand, 21438393 - 21438263
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttc-tttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgat |
203 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||||||||||| || || |||||| ||||||||||||||||| || |||||| | ||||||||||||||| | |
|
|
| T |
21438393 |
tttattagagattcaaaattttaactatgcatttaaatt-ctgtcatttcagagatttatcaaacaatagtttgaacggtcccttacctgattttctggt |
21438295 |
T |
 |
| Q |
204 |
gcaactgcgttcactaaaagtcttgtaagtcc |
235 |
Q |
| |
|
|||||||| ||||| ||||||||||||||| |
|
|
| T |
21438294 |
gcaactgcaatcactgcaagtcttgtaagtcc |
21438263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 4922078 - 4921943
Alignment:
| Q |
105 |
tttattggagattcaaaattgtaactcagcatttaaattgctttctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatg |
204 |
Q |
| |
|
|||||||| | ||||||||||||| || |||| ||||||| || ||||||||| |||||||||||| | ||||||||| ||||||||||||| |||| |
|
|
| T |
4922078 |
tttattggggtttcaaaattgtaattctgcatataaattg-ttcatttcagggacttatcaaacaatggtttaaacggtcctttacctgatttcctgaca |
4921980 |
T |
 |
| Q |
205 |
caactgcgttcactaaaagtcttgtaagtcctatgtt |
241 |
Q |
| |
|
||||||| |||||||| || |||||||||| ||||| |
|
|
| T |
4921979 |
caactgccatcactaaatgtattgtaagtcccatgtt |
4921943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4889327 - 4889266
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttg |
62 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4889327 |
atatcatcatccatatcaaagctcactatgttacaatacttgtgagttcctaatctcatttg |
4889266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 4689780 - 4689836
Alignment:
| Q |
5 |
catcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcattt |
61 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4689780 |
catctttcatatcaaagctcgctatgttagagtacttgtgagttcctaatctcattt |
4689836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4737546 - 4737614
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaat |
69 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| || ||||||||||||||||||| |||||| |||||| |
|
|
| T |
4737546 |
atatcatcttccatatcaaagctcactatgttgcaatacttgtgagttcctaatcccatttgattaaat |
4737614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4900409 - 4900341
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaat |
69 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
4900409 |
atatcatcttccatatcgaagctcactatgttacagtacttgtaagttcctaatctcattctgttaaat |
4900341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 10448136 - 10448197
Alignment:
| Q |
8 |
cttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaat |
69 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||||||||||||| | |||||| |
|
|
| T |
10448136 |
cttccatatcaaagctcactatgttacagtatttgtgagttcctaatctcattggattaaat |
10448197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4704298 - 4704366
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaat |
69 |
Q |
| |
|
|||||||||||||||| |||| || | || |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4704298 |
atatcatcttccatattaaagttcaccatattacagtacttgtgagttcctaatctcatttgattaaat |
4704366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 4716322 - 4716386
Alignment:
| Q |
5 |
catcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaat |
69 |
Q |
| |
|
|||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||| |||||| |
|
|
| T |
4716322 |
catcttccatctcaaagctcactatgttagagtacttgtgagtttctaatctcatttgattaaat |
4716386 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4726989 - 4727057
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaat |
69 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| || ||||||||||||||||||| |||||| |||||| |
|
|
| T |
4726989 |
atatcatctgccatatcaaagctcactatgttgcaatacttgtgagttcctaatcccatttgattaaat |
4727057 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4775883 - 4775823
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcattt |
61 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4775883 |
atatcatcttccatatcaaagctaactatgttacaatacttgtgagttcctaatcttattt |
4775823 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 4997327 - 4997400
Alignment:
| Q |
149 |
ctttcagggatttatcaaacaatagcttaaacggttctttacctgattttctgatgcaactgcgttcactaaaa |
222 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||| | |||||||||||||||| |||||||| ||||||||| |
|
|
| T |
4997327 |
ctttcagggatttatcaaataatagcttaagcggccccttacctgattttctgacacaactgcggtcactaaaa |
4997400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 4923215 - 4923159
Alignment:
| Q |
13 |
atatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaat |
69 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
4923215 |
atatcaaagctcactatgttgcagtacttgtgagtacctaatttcatttggttaaat |
4923159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4912815 - 4912747
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcatttggttaaat |
69 |
Q |
| |
|
||||||| |||||||||||||||| | || ||||| ||||||||||||||| |||||||| ||||||| |
|
|
| T |
4912815 |
atatcatattccatatcaaagctcacaatattacaatacttgtgagttcctcatctcattatgttaaat |
4912747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21438755 - 21438697
Alignment:
| Q |
1 |
atatcatcttccatatcaaagctcgctatgttacagtacttgtgagttcctaatctcat |
59 |
Q |
| |
|
|||||||||| ||| ||||||||| | |||||||| |||||||||||||| ||||||| |
|
|
| T |
21438755 |
atatcatcttacatctcaaagctcacaatgttacaaaacttgtgagttccttatctcat |
21438697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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