View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3887_low_1 (Length: 572)
Name: NF3887_low_1
Description: NF3887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3887_low_1 |
 |  |
|
| [»] scaffold0200 (1 HSPs) |
 |  |  |
|
| [»] scaffold0050 (1 HSPs) |
 |  |  |
|
| [»] scaffold0312 (1 HSPs) |
 |  |  |
|
| [»] scaffold0262 (2 HSPs) |
 |  |  |
|
| [»] scaffold0001 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 123; Significance: 6e-63; HSPs: 27)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 308 - 468
Target Start/End: Complemental strand, 25653768 - 25653611
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
25653768 |
gtttaattttgatttaatcagggaaatagttgcaataagtaaagatataatgacacaccttatgagcaaatgt---gcaatacaccatacaatctgacgt |
25653672 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttaccaaaaagt |
468 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25653671 |
gatatgaattaaatacacaaatactcaatgattgatcatagagttaactttaccaaaaagt |
25653611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 25654104 - 25653929
Alignment:
| Q |
11 |
caaaggacggaagtgattaaaggtatggttggtgttggaccagatgaattttt-gagcgaagggtatgaacaaa--------------gatgataagatt |
95 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| || |||||||||||| |||||||||||| |
|
|
| T |
25654104 |
caaaggacggaagtgattaaaggtatggatggtgttggaccagatgaattttttgagtaaaaggtatgaacaaatttgaactgatgaagatgataagatt |
25654005 |
T |
 |
| Q |
96 |
ttggagtgaaagggagtgaaataatgacaaaataagatgataaaattttggagttaaaggaactaatgaagatgaa |
171 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
25654004 |
ttggagtgaaagggagtgaaataatgacaaaataagatgataaaattttggagttaaaggaactgatgaaaatgaa |
25653929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 308 - 499
Target Start/End: Original strand, 36055738 - 36055923
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| || |
|
|
| T |
36055738 |
gtttaattttgatttaatcggggacacaattgtaataagtaaagatataatgacacaccttatgagcaaat---gtgcaatacaccatgtaatctgatgc |
36055834 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcct |
499 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||| ||| ||||||| || | |||||| |||||||| || ||| |||| ||||||||| |
|
|
| T |
36055835 |
gacatgaattaaattcacaaatgctcaatgattgaccat----ttaacttcacaagaaaagtcattctcatgacatcaccataaaattttcct |
36055923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 308 - 501
Target Start/End: Complemental strand, 22616677 - 22616491
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||| |
|
|
| T |
22616677 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgggcaaatgtc---caatacaccatataatatgacgt |
22616581 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttccttt |
501 |
Q |
| |
|
|||||| |||||||||| ||| ||||||||||| ||| ||||||| |||| |||||| ||| |||| |||||| |||||||||||||||| |
|
|
| T |
22616580 |
gacatggattaaataca-taatgctcaatgattggccat----ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttccttt |
22616491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 308 - 442
Target Start/End: Complemental strand, 31878567 - 31878436
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||| |
|
|
| T |
31878567 |
gtttaattttgatttaatcagggacacaattgtcataagtaaagatataatgacacaccttatagacaaat---gtgcaatacaccatataatctgacgt |
31878471 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||| |
|
|
| T |
31878470 |
gacatgaattaaatacacaaatgcttaatgattga |
31878436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 41417443 - 41417572
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||| |
|
|
| T |
41417443 |
gtttaattttgatttaatctgggacacaattgcaataagtaaagataaaatgacacaccttatgagcaaat---ttgcaatacaccatataatctgacat |
41417539 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgatt |
440 |
Q |
| |
|
|| || |||||||||||||||| ||||||||| |
|
|
| T |
41417540 |
gatataaattaaatacacaaatgttcaatgatt |
41417572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 501
Target Start/End: Original strand, 12081131 - 12081324
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatc-tgacg |
406 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| |||| ||| | |
|
|
| T |
12081131 |
gtttaattttgatttaatcagggacttaattgcaataagtaaagatataaggacacaccttataagcaaat---gtgtaatacaccatataatcttgatg |
12081227 |
T |
 |
| Q |
407 |
cgacatgaattaaatacacaaatactcaatgattgatcatagagttaactt---taccaaaaagttattctcataacttcaacatagaattttccttt |
501 |
Q |
| |
|
|| |||| |||| |||||| ||| |||||||||||||||| |||||||| | ||||||| ||||||||||||||| |||| |||||| |||| |
|
|
| T |
12081228 |
cgtcatggattatatacac-aatgtccaatgattgatcatagggttaacttagcaaaaaaaaagtcattctcataacttcaccatataatttttcttt |
12081324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 309 - 427
Target Start/End: Complemental strand, 10053406 - 10053291
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcg |
408 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||| |||| |
|
|
| T |
10053406 |
tttaattttgatttaatcagggactcaattgcaataagtaaagatataatgacacaccttatgagcaaat---gtgcaatacacgatataatccgacgta |
10053310 |
T |
 |
| Q |
409 |
acatgaattaaatacacaa |
427 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
10053309 |
acatggattaaatacacaa |
10053291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 313 - 442
Target Start/End: Complemental strand, 10237593 - 10237467
Alignment:
| Q |
313 |
attttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacat |
412 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||| ||||||||| | |||||||| |||||| | ||||||||||| ||||||||| || || |
|
|
| T |
10237593 |
attttgatttaatctgggacacaattggaataagtaaatatataatgaaataccttatggacaaatgc---gcaatacaccatataatctgacgtgaaat |
10237497 |
T |
 |
| Q |
413 |
gaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
||||||||||||||||| |||||||||||| |
|
|
| T |
10237496 |
gaattaaatacacaaatgctcaatgattga |
10237467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 21320935 - 21320800
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||| |||||| || ||||||||||| ||||||| | |
|
|
| T |
21320935 |
gtttaattttgatttaatcagagacacaattgtaataagtaaagatataatgatacatcttatatgcaaat---atgcaatacaccatataatctgatgt |
21320839 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
| ||| | |||||||||| ||| |||||||||||||||| |
|
|
| T |
21320838 |
ggcattagttaaatacacgaatgctcaatgattgatcat |
21320800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 308 - 371
Target Start/End: Complemental strand, 33163699 - 33163636
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatg |
371 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33163699 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatggcacaccttatg |
33163636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 21266203 - 21266131
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21266203 |
gtttaaatttgatttaatcagagactcaattgcaataagtaaagatataatgatacaccttatgagcaaatgt |
21266131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 26411481 - 26411346
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||| ||||| || || || ||||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
26411481 |
gtttaattttgatttaattagggatacaattgcaataagtaaatatatagtggcatactgtatgagcaaatgtac---aatacaccatataatttgacgt |
26411385 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||||| |||| |
|
|
| T |
26411384 |
gacatgtattaaatacataaatattcaatgattggtcat |
26411346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 495
Target Start/End: Complemental strand, 13380683 - 13380498
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | ||||| | |||| ||| |||||||||| | | ||||| |
|
|
| T |
13380683 |
gtttaattttgatttaatcagggatacaattgcaataaataaagatataatgacatattttatgggtaaat---gtgcaatacaccatgtagtatgacgt |
13380587 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattt |
495 |
Q |
| |
|
| | |||||||||||||||||||| | | ||||||||| |||||||| || | |||||| |||||||| |||||| |||| ||||| |
|
|
| T |
13380586 |
tataaagattaaatacacaaatactcattaagtgatcatagggttaacttcactagaaaagtcattctcatgacttcaccataaaattt |
13380498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 13887425 - 13887353
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
13887425 |
gtttaattttgatttaatcaaggacacaattgcaataagtaaaaatataatggtacaccatatgagcaaatgt |
13887353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 308 - 415
Target Start/End: Complemental strand, 27579212 - 27579108
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||| |||||||||||| || |||||||||||||||| ||||||||||||||| ||| |||| |||||| || ||||||||||| ||||||||| |
|
|
| T |
27579212 |
gtttacttttgatttaattagagacacaattgcaataaataaagatataatgacgcactttataggcaaat---atgcaatacaccatataatctgacgt |
27579116 |
T |
 |
| Q |
408 |
gacatgaa |
415 |
Q |
| |
|
|||||||| |
|
|
| T |
27579115 |
gacatgaa |
27579108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 308 - 429
Target Start/End: Original strand, 33752912 - 33753030
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||| ||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||| || ||||| ||| |||| ||| || ||||||| | |
|
|
| T |
33752912 |
gtttaaattttatttaatcagggacacaatggcaataagtaaagatacaataacacaccttgtggacaaat---gtgcaataaaccctataatctgaagt |
33753008 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaat |
429 |
Q |
| |
|
||||| ||||||||||||||| |
|
|
| T |
33753009 |
gacattgattaaatacacaaat |
33753030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 498
Target Start/End: Original strand, 33848551 - 33848739
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||| |||||||| ||| |||||| || || ||||| ||| |||| | | || ||||||| | |
|
|
| T |
33848551 |
gtttaattttgatttaatcagagacacaatgacaataaataaagatacaataacacacattgtggacaaat---gtgcaataaatcctataatctgaagt |
33848647 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
||||| ||||||||||||||| || |||||||| | |||| ||||| || |||| |||| | |||||||| | |||| |||||||||||| |
|
|
| T |
33848648 |
gacattgattaaatacacaaatgctaaatgattggttatagggttaatttcaccagaaaaatgattctcattatttcactatagaattttcc |
33848739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 8777277 - 8777349
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
8777277 |
gtttaattttgatttaacgaaggacacaattgcaataagtaaaaatatagtggtacaccatatgagcaaatgt |
8777349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 380
Target Start/End: Complemental strand, 25513954 - 25513887
Alignment:
| Q |
313 |
attttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
25513954 |
attttgatttaatcaaggagacaattgcaataagtaaaaatatagtggtacaccatatgagcaaatgt |
25513887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 346
Target Start/End: Original strand, 25521707 - 25521745
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataag |
346 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
25521707 |
gtttaattttgatttaatcaaggacacaattgcaataag |
25521745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 504
Target Start/End: Original strand, 22974203 - 22974263
Alignment:
| Q |
445 |
atagagttaactttaccaaaaagtt-attctcataacttcaacatagaattttccttttaa |
504 |
Q |
| |
|
|||| |||||||| |||||||| | ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22974203 |
atagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaattttccttttaa |
22974263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 556
Target Start/End: Complemental strand, 25652582 - 25652533
Alignment:
| Q |
503 |
aagaaactaatagaatttgttatatataaacaaacatatgtgttacgaaggaac |
556 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
25652582 |
aagaaactaatagaatttgttatatata----aacatatgtgttaagaaggaac |
25652533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 15724544 - 15724490
Alignment:
| Q |
445 |
atagagttaactttaccaaaaa-gttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
|||| |||||||| |||||||| || ||||||||||||||| ||||||||||||| |
|
|
| T |
15724544 |
atagtgttaacttcaccaaaaaagtcattctcataacttcaccatagaattttcc |
15724490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 19119913 - 19119855
Alignment:
| Q |
445 |
atagagttaactttacca-aaaagttattctcataacttcaacatagaattttcctttt |
502 |
Q |
| |
|
|||| |||||||| |||| |||||| |||||||| |||||| ||||||||||||||||| |
|
|
| T |
19119913 |
atagtgttaacttcaccacaaaagtcattctcatgacttcaccatagaattttcctttt |
19119855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 8742008 - 8742065
Alignment:
| Q |
445 |
atagagttaactttacca-aaaagttattctcataacttcaacatagaattttccttt |
501 |
Q |
| |
|
|||| |||||||| |||| |||||| |||||||| |||||| |||||||||||||||| |
|
|
| T |
8742008 |
atagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttccttt |
8742065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 496
Target Start/End: Original strand, 25501047 - 25501099
Alignment:
| Q |
445 |
atagagttaactttacca-aaaagttattctcataacttcaacatagaatttt |
496 |
Q |
| |
|
|||| ||||||||||||| |||||| |||||||| |||||| ||||||||||| |
|
|
| T |
25501047 |
atagtgttaactttaccagaaaagtcattctcatgacttcaccatagaatttt |
25501099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 103; Significance: 6e-51; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 308 - 503
Target Start/End: Original strand, 11084018 - 11084205
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||| |
|
|
| T |
11084018 |
gtttaattttgatttaatcagagacacaattgcaataagtaaagatataatgacacaccttatgggcaaat---gtgtaatacaccatataa--tgacgt |
11084112 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcctttta |
503 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||||| |||| |||||||||||| |||||||||| |||| |||||| |||||||||||||||||| |
|
|
| T |
11084113 |
gacatggattaaatacataaatattcaatgattggtcat----ttaactttaccagaaaagttattttcatgacttcaccatagaattttcctttta |
11084205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 309 - 500
Target Start/End: Complemental strand, 19631932 - 19631747
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcg |
408 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||| ||| ||||||||||| ||||| ||| | |
|
|
| T |
19631932 |
tttaattttgatttaatcagagacacgattgcaataagtaaagatataatgaaacaccttataggcaaat---gtgcaatacaccatataatctaacgtg |
19631836 |
T |
 |
| Q |
409 |
acatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| |||| ||||||| |||| |||||| ||||| || |||||| ||||||||||||||| |
|
|
| T |
19631835 |
acatggattaaatacacaaatgttcaatgattggtcat----ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttcctt |
19631747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 308 - 446
Target Start/End: Original strand, 26301789 - 26301922
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| || |||||| |||| || ||||| |
|
|
| T |
26301789 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacatcttatggataaat---atgcaatacatcatataa--tgacgt |
26301883 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
26301884 |
gacatgaattaaatacataaatattcaatgattggtcat |
26301922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 308 - 419
Target Start/End: Complemental strand, 34994015 - 34993907
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| || ||||| ||||| ||| ||||||||||| ||||||| | |
|
|
| T |
34994015 |
gtttaattttgatttaatcaaggacacaattgtaataagtaaagatataataacatacattatggacaaat---gtgcaatacaccatataatctgatgt |
34993919 |
T |
 |
| Q |
408 |
gacatgaattaa |
419 |
Q |
| |
|
|||||||||||| |
|
|
| T |
34993918 |
gacatgaattaa |
34993907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 30341207 - 30341136
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| |||||||||||||||| |||||| |||||||| |
|
|
| T |
30341207 |
tttaattttgatttaatcatgaacacaattgcaataagtgaagatataatgacacaacttatgggcaaatgt |
30341136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 4488446 - 4488518
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||| ||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
4488446 |
gtttaattttgatttaatcaagaacacaattgcaacaagtaaaaatatagtggtacaccatatgagcaaatgt |
4488518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 25441146 - 25441074
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||| ||||| || ||||| ||| ||||||||| |
|
|
| T |
25441146 |
gtttaattttaatttaatcaaggacacaattgcaataagtaaaaatatagtggtacaccatataagcaaatgt |
25441074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 4103070 - 4103033
Alignment:
| Q |
333 |
acaattgcaataagtaaagatataatgacacaccttat |
370 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4103070 |
acaattgcaataagtaaaaatataatgacacaccttat |
4103033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 4318953 - 4319011
Alignment:
| Q |
445 |
atagagttaactttaccaaaaa-gttattctcataacttcaacatagaattttcctttt |
502 |
Q |
| |
|
|||| |||||||| |||||||| || |||||||| |||||| ||||||||||||||||| |
|
|
| T |
4318953 |
atagtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcctttt |
4319011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 103; Significance: 6e-51; HSPs: 26)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 308 - 496
Target Start/End: Complemental strand, 41644056 - 41643874
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||| |
|
|
| T |
41644056 |
gtttaattttgatttaatcagggatacaattgcaataagtaaagatataatgacacaccttatgatcaaat---gtgcaatacaccatataatctgacgt |
41643960 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaatttt |
496 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||| ||||||| ||| ||||||| ||| |||| |||||| ||||||||||| |
|
|
| T |
41643959 |
gacatgaattaaatacacaaatgctcaatgattgaccat----ttaacttcaccaaaaaagtcattatcatgacttcaccatagaatttt |
41643874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 308 - 500
Target Start/End: Original strand, 34441787 - 34441971
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||| ||| ||||||||||| || ||||| |
|
|
| T |
34441787 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataacgacacatcttatgggcaaat---gtgcaatacaccatataa--tgacgt |
34441881 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| |||| ||||||||||| ||||||| ||| |||| |||||| ||||||||||||||| |
|
|
| T |
34441882 |
gacatgaattaaatacacaaatattcaataattggtcat----ttaactttaccaaaaaagtcattttcatgacttcaccatagaattttcctt |
34441971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 308 - 499
Target Start/End: Complemental strand, 19073542 - 19073356
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||| ||||||||| |
|
|
| T |
19073542 |
gtttaactttgatttaatcagggacacaatttcaataagtaaatatataatgacacaccttatagacaaat---gtggaatacaccatataatctgacgt |
19073446 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc--aaaaagttattctcataacttcaacatagaattttcct |
499 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||| ||| ||||||| ||| ||||| | ||||||||||||||| |||||||||||||| |
|
|
| T |
19073445 |
gacatggattaaatacacaaattctcaatgattgaccat----ttaacttcaccaaaaaaaatcattctcataacttcaccatagaattttcct |
19073356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 313 - 500
Target Start/End: Complemental strand, 6177954 - 6177773
Alignment:
| Q |
313 |
attttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacat |
412 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||||||| | ||||||||||| ||||||||| ||||| |
|
|
| T |
6177954 |
attttgatttaatcagggacacaattggaataagtaaatatataatgacataccttatgggcaaatgc---gcaatacaccatataatctgacgtgacat |
6177858 |
T |
 |
| Q |
413 |
gaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||||||| ||||| | ||||||||||||| |
|
|
| T |
6177857 |
gaattaaatacacaaatgctcaatgattgaccat----ttaacttcaccagaaaagtcattctcatgacttcgccgtagaattttcctt |
6177773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 308 - 442
Target Start/End: Complemental strand, 15651032 - 15650901
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||| ||| |
|
|
| T |
15651032 |
gtttaattttgatttaatcaggaacacaattgcaataagtaaagatataatgacacaccttatgggcaaat---gtgaaatacaccatataatcttacgt |
15650936 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
|| ||| |||||||||||||||| | ||||||||| |
|
|
| T |
15650935 |
gatatggattaaatacacaaatatttaatgattga |
15650901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 308 - 442
Target Start/End: Original strand, 18779263 - 18779396
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatga--gcaaatgtcgtgtaatacaccatacaatctgac |
405 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||||||||| ||| |||||| |||| | |||||| ||| |||| |||||| ||||||| |
|
|
| T |
18779263 |
gtttaactttgatttaatcaggaacacaattgcaataagtaaagataaaataacacactttattatggcaaat---gtgcaataaaccatataatctgat |
18779359 |
T |
 |
| Q |
406 |
gcgacatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
18779360 |
gtgacatgaattaaatacacaaatgctcaatgattga |
18779396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 30845031 - 30844850
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| || ||| ||| |||||||||||||||| |||||||||| |||||| ||||| ||| |||| | |||| ||||||||| |
|
|
| T |
30845031 |
gtttaattttgatttaattagagactcaaatgcaataagtaaagatttaatgacacatcttatggacaaat---gtgcaatatatcatataatctgacgt |
30844935 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaa |
492 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||||||||| | ||||||| ||| |||||| ||||||||||||||| ||||||| |
|
|
| T |
30844934 |
gacatggattaaataca-gaatgctcaatgattgatcatgggattaacttcaccttaaaagtcattctcataacttcaccatagaa |
30844850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 308 - 497
Target Start/End: Complemental strand, 42005571 - 42005390
Alignment:
| Q |
308 |
gtttaattttgatttaatcaggg-acacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacg |
406 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||| ||| ||||||||||| || ||||| |
|
|
| T |
42005571 |
gtttaattttgatttaatcaggggacacaattacaataagtaaagatgtaatgacacaccttatgggcaa----tgtgcaatacaccatataa--tgacg |
42005478 |
T |
 |
| Q |
407 |
cgacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttc |
497 |
Q |
| |
|
|||||| |||||||| ||||||| |||||| |||||||| ||||||| ||| ||||| | ||| |||| |||||| |||||||||||| |
|
|
| T |
42005477 |
tgacatggattaaataaacaaatattcaatggttgatcat----ttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttc |
42005390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 41713346 - 41713213
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||| |||||||| | ||||||||||||| |||||| |||||| |||||| |||||||| || ||||| |
|
|
| T |
41713346 |
gtttaattttgatttaattagggaaacaattgtaataagtatacatataatgacacatcttatgggcaaat---gtgtaacacaccatataa--tgacgt |
41713252 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
41713251 |
gacatgaattaaatacataaatattcaatgattggtcat |
41713213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 309 - 442
Target Start/End: Original strand, 18059227 - 18059357
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcg |
408 |
Q |
| |
|
||||||||| || |||||| |||||||||||||||||||||||||||||| |||||| ||||| |||| || ||||||||||| |||||||| | |
|
|
| T |
18059227 |
tttaattttaatctaatcaaggacacaattgcaataagtaaagatataataacacacattatggataaat---atgcaatacaccatataatctgacatg |
18059323 |
T |
 |
| Q |
409 |
acatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||| |
|
|
| T |
18059324 |
acatgaattaaatacacaaatattcaataattga |
18059357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 308 - 441
Target Start/End: Original strand, 27138885 - 27139014
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| || |||||||| || ||||||||| |
|
|
| T |
27138885 |
gtttaattttgatttaatcagggacacaattgcaacccgtaaagatataatgacacactttatgggcaaat---atgcaatacaccgtataatctgacgt |
27138981 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattg |
441 |
Q |
| |
|
|||||| ||| ||||||||||| |||||||||| |
|
|
| T |
27138982 |
gacatggatt-aatacacaaatgatcaatgattg |
27139014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 499
Target Start/End: Original strand, 43446322 - 43446511
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||| |||| || | ||||||||||| |||||||||||||||| ||||| ||| |||||||||| |||| || |||||||| ||| ||||| |
|
|
| T |
43446322 |
gtttaattttaattttattaaggacacaattgtaataagtaaagatatagtgacataccctatgagcaaa---cgtgcaacacaccatataatttgacgt |
43446418 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttcct |
499 |
Q |
| |
|
| ||| |||| |||| ||||| ||||||||||||||| |||||| ||| ||||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
43446419 |
ggtatgcattagatacgcaaatgttcaatgattgatcattctcataacttcaccgaaaaagtcattctcatgacttcaccatagaattttcct |
43446511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 38250000 - 38250052
Alignment:
| Q |
310 |
ttaattttgatttaatcagggacacaattgcaataagtaaagatataatgaca |
362 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38250000 |
ttaattttgatttaatcagggacacaattgcaataagtaaagatataatgaca |
38250052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 348 - 498
Target Start/End: Complemental strand, 22963548 - 22963400
Alignment:
| Q |
348 |
aaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacatgaattaaatacacaaatactcaatgattgatcata |
447 |
Q |
| |
|
|||||||||||||||||||||| || ||||| | ||| ||||||||| ||||||||| ||| |||||||||||||| || |||||||| ||||| |
|
|
| T |
22963548 |
aaagatataatgacacaccttaagaacaaatat---gtagtacaccatataatctgacgttgcattgattaaatacacaaaagctaaatgattggtcata |
22963452 |
T |
 |
| Q |
448 |
gagttaactttacca-aaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
| |||||||||||| |||||| ||||| || |||||| |||| |||||||| |
|
|
| T |
22963451 |
ggattaactttaccagaaaagtcattcttatgacttcaccataaaattttcc |
22963400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 494
Target Start/End: Original strand, 18947537 - 18947642
Alignment:
| Q |
386 |
aatacaccatacaatctgacgcgacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttca |
484 |
Q |
| |
|
||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||| ||| ||||||| |||| |||||||||| |||| |||||| |
|
|
| T |
18947537 |
aatacaccatataatctgacgtgacatggattaaatacacaaatgttcaatgattgaccat----ttaacttcaccagaaaagttattttcatgacttca |
18947632 |
T |
 |
| Q |
485 |
acatagaatt |
494 |
Q |
| |
|
||||||||| |
|
|
| T |
18947633 |
ccatagaatt |
18947642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 32652021 - 32651949
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
32652021 |
gtttaattttgatttaatcaaggacacaattgcaacaagtaaaaatatagtggtacaccatatgagcaaatgt |
32651949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 40913164 - 40913235
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||| ||||| || ||||| ||||||||||||| |
|
|
| T |
40913164 |
tttaattttgatttaatcaaggacacaattgcaataaataaaaatatagtggtacaccatatgagcaaatgt |
40913235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 498
Target Start/End: Original strand, 22997929 - 22998077
Alignment:
| Q |
348 |
aaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacatgaattaaatacacaaatactcaatgattgatcata |
447 |
Q |
| |
|
|||||||||| ||||||||||| || ||||| | ||| ||||||||| ||||||||| ||| |||||||||||||| || |||||||| ||||| |
|
|
| T |
22997929 |
aaagatataacgacacaccttaagaacaaatat---gtagtacaccatataatctgacgttgcattgattaaatacacaaaagctaaatgattggtcata |
22998025 |
T |
 |
| Q |
448 |
gagttaactttacca-aaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
| |||||||||||| |||||| ||||| || |||||| |||| |||||||| |
|
|
| T |
22998026 |
ggattaactttaccagaaaagtcattcttatgacttcaccataaaattttcc |
22998077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 7553538 - 7553474
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatga |
372 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| ||||| ||| ||||| ||||| |
|
|
| T |
7553538 |
gtttaattttgatttaatcaatgacacaattgcaataagtaaaaatatagtgatacaccatatga |
7553474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 424
Target Start/End: Complemental strand, 58204 - 58097
Alignment:
| Q |
313 |
attttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacat |
412 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||| |||| || |||||| ||||| ||||| ||| ||||||||||| ||| ||| ||||| |
|
|
| T |
58204 |
attttaatttaatcagg-acacaattgcaataagtaaaaatattgtggcacaccgtatgaacaaat---gtgcaatacaccatataatttgatctgacat |
58109 |
T |
 |
| Q |
413 |
gaattaaataca |
424 |
Q |
| |
|
|||||||||||| |
|
|
| T |
58108 |
gaattaaataca |
58097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 500
Target Start/End: Original strand, 31570902 - 31570939
Alignment:
| Q |
463 |
aaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
31570902 |
aaaagttattctcataacttcaccatagaattttcctt |
31570939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 6348900 - 6348832
Alignment:
| Q |
312 |
aattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||| | |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||| |
|
|
| T |
6348900 |
aattttgatttaattaaggacccaattgcaataagtaaaactataatggtacaccatatgaacaaatgt |
6348832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 39788474 - 39788530
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacaca |
364 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||| |
|
|
| T |
39788474 |
gtttaattttgatttaaccagagacataattgcagtaagtaacaatataatgacaca |
39788530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 503
Target Start/End: Original strand, 2325538 - 2325578
Alignment:
| Q |
463 |
aaaagttattctcataacttcaacatagaattttcctttta |
503 |
Q |
| |
|
|||||| |||| |||||||||| |||||||||||||||||| |
|
|
| T |
2325538 |
aaaagtcattcacataacttcaccatagaattttcctttta |
2325578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 18947474 - 18947506
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgc |
340 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |
|
|
| T |
18947474 |
gtttacttttgatttaatcagggacacaattgc |
18947506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 498
Target Start/End: Complemental strand, 31861931 - 31861895
Alignment:
| Q |
462 |
aaaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
31861931 |
aaaaagtcattctcataacttcaccatagaattttcc |
31861895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 501
Target Start/End: Original strand, 4108778 - 4108963
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||| || ||||| |
|
|
| T |
4108778 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataacgacacaccttatgggcaaat---gtgcaatacaccatataa--tgacgt |
4108872 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttccttt |
501 |
Q |
| |
|
| ||| ||||||||||||||||| |||||||||| |||| ||||||||||| ||||||| ||| |||| |||||| |||| ||||||||||| |
|
|
| T |
4108873 |
ggcattaattaaatacacaaatattcaatgattggtcat----ttaactttaccaaaaaagtcattttcatgacttcaccataaaattttccttt |
4108963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 439
Target Start/End: Complemental strand, 3038590 - 3038462
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||| || ||||||||| |
|
|
| T |
3038590 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatggacagat---gtgcaatacactgtataatctgacgt |
3038494 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgat |
439 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||| |
|
|
| T |
3038493 |
gacataaattaaatagacaaatgctcaatgat |
3038462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 7290900 - 7290774
Alignment:
| Q |
311 |
taattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgac |
410 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||| | ||||||| |||||| ||||| ||||||||| ||| |
|
|
| T |
7290900 |
taattttgatttaatcaggaatacaattgcaataagtaaagatataataatacatcttatgggaaaatgtc---taatacgccatataatctgacgtgac |
7290804 |
T |
 |
| Q |
411 |
atgaattaaatacacaaatactcaatgatt |
440 |
Q |
| |
|
|||||||||| ||||||| ||||||||| |
|
|
| T |
7290803 |
atgaattaaacgcacaaatgatcaatgatt |
7290774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 308 - 496
Target Start/End: Original strand, 35735845 - 35736030
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||| |||| ||||||||||| || |||||||||||||||||| ||| ||||||||||| ||| | ||| |
|
|
| T |
35735845 |
gtttaatttttatttaatcagg-acacaattgtaataggtaaagatatagtggcacaccttatgagcaaat---gtgcaatacaccatataatttaacgg |
35735940 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaatttt |
496 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| || || ||||||| ||| ||||||| ||||| || |||||| ||||||||||| |
|
|
| T |
35735941 |
gacacacattaaatacacaaatgctcaatgattcgtcgtatgattaacttcaccaaaaaagtcattctaatgacttcaccatagaatttt |
35736030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 308 - 433
Target Start/End: Original strand, 6267369 - 6267491
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||| || |||||||||| | || |||||| |
|
|
| T |
6267369 |
gtttaattttgatttaatcaaggacataattgcaataagtaaagatataataacacaccttatagataaat---gtataatacaccaaataacctgacgt |
6267465 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactc |
433 |
Q |
| |
|
| ||||| |||||||||||||||||| |
|
|
| T |
6267466 |
ggcatgacttaaatacacaaatactc |
6267491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 18756537 - 18756593
Alignment:
| Q |
314 |
ttttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttat |
370 |
Q |
| |
|
|||| ||| ||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18756537 |
ttttaattgaatcatggacacaattgcaataagtaaagatataatgacacatcttat |
18756593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 23176650 - 23176690
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagta |
348 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23176650 |
gtttaattttgatttaatcagggacacaattgcaataagta |
23176690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 1879090 - 1879138
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatata |
356 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
1879090 |
gtttaattttgatttaatcaaggacacatttgcaataagtaaaaatata |
1879138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 30380989 - 30381040
Alignment:
| Q |
319 |
atttaatcagggacacaattgcaataagtaaagatataatgacacaccttat |
370 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
30380989 |
atttaatcaggggcacaattataataagtaaagatataatgacacatcttat |
30381040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 1835249 - 1835297
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatata |
356 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| ||||||||| ||||| |
|
|
| T |
1835249 |
gtttaattttgatttaatcaaggacacatttgcgataagtaaaaatata |
1835297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 371
Target Start/End: Complemental strand, 34463575 - 34463537
Alignment:
| Q |
333 |
acaattgcaataagtaaagatataatgacacaccttatg |
371 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
34463575 |
acaattacaataagtaaagatataatgacacaccatatg |
34463537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 500
Target Start/End: Original strand, 43643732 - 43643788
Alignment:
| Q |
445 |
atagagttaactttaccaaaa-agttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
|||| |||||||| ||||||| ||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
43643732 |
atagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcctt |
43643788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 88; Significance: 5e-42; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 1012481 - 1012351
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaa-ttgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacg |
406 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||| |
|
|
| T |
1012481 |
gtttaattttgatttaatcagggacacaaattgcaataagtaaagatataatgacacaccttatgggcaaat---gtgcaatacaccatataatctgacg |
1012385 |
T |
 |
| Q |
407 |
cgacatgaattaaatacacaaatactcaatgatt |
440 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||| |
|
|
| T |
1012384 |
tgacatggattaaatacacaaatactcgatgatt |
1012351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 308 - 455
Target Start/End: Original strand, 33036066 - 33036209
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||| ||| ||||| ||| |
|
|
| T |
33036066 |
gtttaattttgatttaatcagagactcaattgcaataagtaaagatataatgacaaaccttataggcaaat---gtgcaatacacaatataatctaacgt |
33036162 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaac |
455 |
Q |
| |
|
||||| |||||||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
33036163 |
aacatggattaaataca-gaatgctcaatgattgatcataaagttaac |
33036209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 309 - 500
Target Start/End: Original strand, 54995664 - 54995849
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcg |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||| |||||| |||| || ||||| | |
|
|
| T |
54995664 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataaagacacacattatggacaaat---gtgcaatacatcatataacctgacatg |
54995760 |
T |
 |
| Q |
409 |
acatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
||||| ||||||||| ||||| ||||||||| ||| ||||||| ||| ||||||| ||| |||| |||||| | ||||||||||||| |
|
|
| T |
54995761 |
acatggattaaatacgcaaatgtacaatgattggccat----ttaacttcaccaaaaaagtcattatcatgacttcatcgtagaattttcctt |
54995849 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 442
Target Start/End: Original strand, 2266720 - 2266851
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| | || | |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||| |
|
|
| T |
2266720 |
gtttaattttgatttaatcaaagtcatagttgcaataagtaaagatataatgacacaccttatagacaaat---gtgtaatacaccatgtaatctaacgt |
2266816 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
| |||| ||||||||||||||| |||||||||||| |
|
|
| T |
2266817 |
ggcatggattaaatacacaaatgctcaatgattga |
2266851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 348 - 497
Target Start/End: Complemental strand, 51204727 - 51204580
Alignment:
| Q |
348 |
aaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacatgaattaaatacacaaatactcaatgattgatcata |
447 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | ||| ||||||| ||||||| | |||||| |||||||||||||| |||||| |||||||||| |
|
|
| T |
51204727 |
aaagatataatgacacaccttattagcaaatgt---gcaatgcaccatataatctgatgtgacatggattaaatacacaaaagctcaataattgatcata |
51204631 |
T |
 |
| Q |
448 |
gagttaactttacca-aaaagttattctcataacttcaacatagaattttc |
497 |
Q |
| |
|
| |||||||| |||| |||||| ||| | || |||||| |||||||||||| |
|
|
| T |
51204630 |
gggttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc |
51204580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 308 - 373
Target Start/End: Complemental strand, 2708057 - 2707992
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgag |
373 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2708057 |
gtttaattttgatttaatcagggactcaattgcaataagtaaagatataatgacacacctgatgag |
2707992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 28292926 - 28293014
Alignment:
| Q |
82 |
aagatgataagattttggagtgaaagggagtgaaataatgacaaaataagatgataaaattttggagttaaaggaactaatgaagatgaa |
171 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||| || | ||||||||||| |
|
|
| T |
28292926 |
aagatgataagattttggagtgaaaggaa-tgaaataatgacaaaataagatgataagattttggagtgaaagaaattgatgaagatgaa |
28293014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 496
Target Start/End: Original strand, 20097426 - 20097537
Alignment:
| Q |
386 |
aatacaccatacaatctgacgcgacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttca |
484 |
Q |
| |
|
||||||| ||| ||||||||| | |||||||||||||||||||| | ||||||||||||||| |||||||| |||| |||||| |||||||| |||||| |
|
|
| T |
20097426 |
aatacactatataatctgacgtggcatgaattaaatacacaaatgcggaatgattgatcatagggttaacttcaccagaaaagtcattctcatgacttca |
20097525 |
T |
 |
| Q |
485 |
acatagaatttt |
496 |
Q |
| |
|
||||||||||| |
|
|
| T |
20097526 |
ccatagaatttt |
20097537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 308 - 442
Target Start/End: Complemental strand, 17612518 - 17612388
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||||| ||| |||||| ||| |||||| || |
|
|
| T |
17612518 |
gtttaattttgatttaatctaggacataattgcaataagtaaagatgcaatgacacaccttattggcaaat---gtgaaatacatcatttaatctggcgt |
17612422 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||||| |
|
|
| T |
17612421 |
gacatgaatt-aatacacaaatgcttaatgattga |
17612388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 427
Target Start/End: Original strand, 17513010 - 17513126
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| | ||| ||||| |||||| ||||||||||||||||||| |||| ||| || ||| || |||| ||| |||||||||| |
|
|
| T |
17513010 |
gtttaattttgatttaattatagactcaattacaataaataaagatataatgacacacattatatgcagat---gtgcaacacactatataatctgacgc |
17513106 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaa |
427 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
17513107 |
gacatgaattaaatacacaa |
17513126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 9743772 - 9743637
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||||||||||||||| |||||| |||| ||||| |||| ||| ||||||||||| ||| ||||| |
|
|
| T |
9743772 |
gtttaattttgatttaatcaagaacataattgcaataagtaaagatttaatgaaacactttatggaaaaat---gtgcaatacaccatataatatgacgt |
9743676 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
||||| ||||||||||||||| ||||| |||| |||| |
|
|
| T |
9743675 |
tacatggattaaatacacaaatgttcaataattggtcat |
9743637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 370
Target Start/End: Complemental strand, 2570662 - 2570600
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttat |
370 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
2570662 |
gtttacttttgatttaattagggacacaattgcaataaataaagatataatgacacactttat |
2570600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 22756796 - 22756924
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||| ||||||| || |||||| |||||||||||||||| || ||| | ||||||||||||| | |||||||| || ||| ||| | |
|
|
| T |
22756796 |
gtttaattttgattcaatcagg-acgcaattggaataagtaaagatatagtggcacgctgtatgagcaaatgt---gcaatacaccgtataatttgatgt |
22756891 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgatt |
440 |
Q |
| |
|
| |||| |||||||||||||||||||||||||| |
|
|
| T |
22756892 |
ggcatgcattaaatacacaaatactcaatgatt |
22756924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 308 - 431
Target Start/End: Complemental strand, 22729894 - 22729775
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||| ||||||| ||||| ||||||||||| |||||||| || |||||| ||||||||||| ||| |||||||| || ||| ||| | |
|
|
| T |
22729894 |
gtttaattttgattcaatcagg-acacagttgcaataagttaagatatagtggcacaccatatgagcaaat---gtgcaatacaccgtataatttgatgt |
22729799 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatac |
431 |
Q |
| |
|
| |||| ||||||||||||||||| |
|
|
| T |
22729798 |
ggcatgcattaaatacacaaatac |
22729775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 335 - 498
Target Start/End: Original strand, 28293124 - 28293285
Alignment:
| Q |
335 |
aattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacatgaattaaatacacaaatactca |
434 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||| | |||||| | |||||| |||| ||| ||| | |||| |||||||||| ||||||| |
|
|
| T |
28293124 |
aattgcaataagtaaagatataataacacatcttataggtaaatgt---gcaatacatcatataatttgatgtagcatggattaaatacattgatactca |
28293220 |
T |
 |
| Q |
435 |
atgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
|||||||| |||| |||||||| ||| ||||||| |||||||| |||||| | ||||||||||| |
|
|
| T |
28293221 |
atgattgaccatatggttaacttcaccgaaaaagtcattctcatgacttcagcgtagaattttcc |
28293285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 5915659 - 5915731
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| ||||| || ||||| ||| ||||||||| |
|
|
| T |
5915659 |
gtttaattttgatttaatcaaggacacaattgcaacaagtaaaaatatagtggtacaccatataagcaaatgt |
5915731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 2704619 - 2704510
Alignment:
| Q |
386 |
aatacaccatacaatctgacgcgacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttca |
484 |
Q |
| |
|
||||||||||| ||| |||| ||| ||||||||||||||||||| ||||||||||||||| ||||||| |||| |||||| ||| |||| |||||| |
|
|
| T |
2704619 |
aatacaccatataat--gacgtgacgtgaattaaatacacaaatattcaatgattgatcat----ttaacttcaccagaaaagtcattttcatgacttca |
2704526 |
T |
 |
| Q |
485 |
acatagaattttcctt |
500 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
2704525 |
ccataaaattttcctt |
2704510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 37793568 - 37793496
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||||| ||||| || ||||| ||||| ||||||| |
|
|
| T |
37793568 |
gtttaattttaatttaatcaaagacacaattgcaataagtaaaaatatagtggtacaccatatgaacaaatgt |
37793496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 5812751 - 5812709
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaa |
350 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5812751 |
gtttaattttgatttaatcaatgacacaattgcaataagtaaa |
5812709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 47237046 - 47236989
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacac |
365 |
Q |
| |
|
||||||||| |||||||||||| | ||||||||||||||||| || ||||||||||| |
|
|
| T |
47237046 |
gtttaatttcgatttaatcaggtgcgcaattgcaataagtaaaaatctaatgacacac |
47236989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 499
Target Start/End: Complemental strand, 37287788 - 37287732
Alignment:
| Q |
445 |
atagagttaactttaccaaaaa--gttattctcataacttcaacatagaattttcct |
499 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||| |||||| |||||||||||||| |
|
|
| T |
37287788 |
atagtgttaactttaccaaaaaaagtcattctcattacttcaccatagaattttcct |
37287732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 33255621 - 33255572
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataatga |
360 |
Q |
| |
|
||||| ||||||||||| || ||||||||||||||||||||||||| |||| |
|
|
| T |
33255621 |
tttaactttgatttaataag--acacaattgcaataagtaaagatatgatga |
33255572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 86; Significance: 8e-41; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 308 - 499
Target Start/End: Original strand, 13876783 - 13876968
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||| ||||| |||||| ||||||||||||||| || ||||| |
|
|
| T |
13876783 |
gtttaattttgatttaatcaaggatacaattgcaataactaaaaatataatgacacactttatgggcaaat---gtgtaatacaccatatgatatgacgt |
13876879 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcct |
499 |
Q |
| |
|
| ||| |||||||||||||||||||||||||||||||| ||||||| |||| |||||| ||| ||||||||||| |||||||||||||| |
|
|
| T |
13876880 |
ggcattgattaaatacacaaatactcaatgattgatcat----ttaacttcaccataaaagtcattttcataacttcaccatagaattttcct |
13876968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 27118514 - 27118385
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| |||| ||| ||||| |
|
|
| T |
27118514 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgaacaaat---gtgcaatacatcatataatatgacgt |
27118418 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgatt |
440 |
Q |
| |
|
| |||| |||||||||| |||| ||| |||||| |
|
|
| T |
27118417 |
ggcatggattaaatacataaatgctccatgatt |
27118385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 308 - 442
Target Start/End: Original strand, 10758164 - 10758295
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| |||||| || ||||||||||| ||||||| | |
|
|
| T |
10758164 |
gtttaattttgatttaattagggacacaattgcaataagtaaaaatataatgacacacactataggcaaat---gttcaatacaccatataatctgatgt |
10758260 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||| |
|
|
| T |
10758261 |
ggcatgaattaaatacacaaatgctcaatgattga |
10758295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 308 - 436
Target Start/End: Complemental strand, 16132659 - 16132534
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||| || ||||| ||| |
|
|
| T |
16132659 |
gtttaattttgatttaatcagagacacaattgcaataagtaaagatataatgacacacattatgtgcaaat---gtgcaatacaccgtataatctcacgt |
16132563 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaat |
436 |
Q |
| |
|
|||| ||||||||||||||| |||||| |
|
|
| T |
16132562 |
tgcatggattaaatacacaaatgctcaat |
16132534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 315 - 442
Target Start/End: Complemental strand, 16127695 - 16127573
Alignment:
| Q |
315 |
tttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacatga |
414 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||| |||||| |||| ||||||||| | |||| |
|
|
| T |
16127695 |
tttgatttattcagggaca--attgcaataagtaaacatataatgacacaccttatgagtaaat---gtgcaatacatcatataatctgacgtgtcatgg |
16127601 |
T |
 |
| Q |
415 |
attaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
||||||||||||||| ||||||||||| |
|
|
| T |
16127600 |
attaaatacacaaatgatcaatgattga |
16127573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 308 - 441
Target Start/End: Complemental strand, 15964284 - 15964154
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||||| ||||| ||| ||||||| ||| ||| ||||| |
|
|
| T |
15964284 |
gtttaattttgatttaatcagggacacaattgatatcagtaagtatataatgacacatcttatggacaaat---gtgcaatacactatataatttgacgt |
15964188 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattg |
441 |
Q |
| |
|
||||| ||||||||||||||| || |||||||| |
|
|
| T |
15964187 |
gacatagattaaatacacaaatgcttaatgattg |
15964154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 500
Target Start/End: Complemental strand, 421577 - 421386
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||| || |||| ||| |||| || || ||| |||| |
|
|
| T |
421577 |
gtttaattttgatttaatcaaggacacaattgcaattagtaaagatataatggaacatcgtataagtaaat---gtgcaataaactgtataatttgacat |
421481 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc--aaaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||| | |||| | | ||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
421480 |
gacatacattaaatacacaaatgttcaatgattgatcattctcatgacttcagcaaaaaaagtcattctcataacttcatcatagaattttcctt |
421386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 21263909 - 21263981
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||| ||||| ||||||| |
|
|
| T |
21263909 |
gtttaattttgatttaatcaaggacacaattgcaataagtaaaaatatagtggtacaccatatgaacaaatgt |
21263981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 25943382 - 25943247
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| ||| |||| |||||| ||||||||||||| ||| | |||| |||||| |||| ||||||||||| ||||||||| |
|
|
| T |
25943382 |
gtttaattttgatttaatcaaaaacaaaattacaataaataaagatataatggcacgcattatcagcaaa---cgtgcaatacaccatataatctgacgt |
25943286 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
||| | |||||||| || ||| |||||| ||||||||| |
|
|
| T |
25943285 |
gacgtcgattaaataaactaatgctcaataattgatcat |
25943247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 426
Target Start/End: Original strand, 31804948 - 31805063
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| | |||| |||||| ||| ||||||||||| ||||| ||| |
|
|
| T |
31804948 |
gtttaattttgatttaatcagtgacacaatttcaagaagtaaagatataatgacatatgttatcggcaaat---gtgcaatacaccatataatctaacgt |
31805044 |
T |
 |
| Q |
408 |
gacatgaattaaatacaca |
426 |
Q |
| |
|
| ||| |||||||||||| |
|
|
| T |
31805045 |
ggcatagattaaatacaca |
31805063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 447
Target Start/End: Complemental strand, 28012251 - 28012114
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaata--agtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgac |
405 |
Q |
| |
|
|||||||||||||||||||||| | |||||| |||| |||||||||||| | |||| |||| |||||||||| | ||||||||||| ||| | | |
|
|
| T |
28012251 |
gtttaattttgatttaatcagg-atacaattataatataagtaaagatatagtagcacatcttaggagcaaatgt---gcaatacaccatataatttaat |
28012156 |
T |
 |
| Q |
406 |
gcgacatgaattaaatacacaaatactcaatgattgatcata |
447 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| | |||||| |
|
|
| T |
28012155 |
gtgacatgcattaaatacacaaatactcaatgaataatcata |
28012114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 454
Target Start/End: Original strand, 17695871 - 17696020
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacacct------tatgagcaaatgtcgtgtaatacaccatacaatc |
401 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| |||||||||||| ||||||||||||||| ||||| ||||| | ||| ||||||| ||| |
|
|
| T |
17695871 |
gtttaattttgatttaatcaaagactcaattacaataagtaaagttataatgacacacctacaccttatgaacaaatatac---aatgcaccatatgatc |
17695967 |
T |
 |
| Q |
402 |
tgacgcgacatgaattaaatacacaaatactcaatgattgatcatagagttaa |
454 |
Q |
| |
|
||||| | |||||||||||||| ||||| ||||||||||| |||| |||||| |
|
|
| T |
17695968 |
tgacgtggtatgaattaaatacataaatattcaatgattgaccataaagttaa |
17696020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 492
Target Start/End: Original strand, 34491439 - 34491551
Alignment:
| Q |
381 |
cgtgtaatacaccatacaatctgacgcgacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataa |
479 |
Q |
| |
|
|||| |||||| | || ||||||| | | |||| ||||||||||||||| | |||||||||||||||| ||||||| | || |||| |||||||||| | |
|
|
| T |
34491439 |
cgtggaatacatcttataatctgatgtggcatggattaaatacacaaatgtttaatgattgatcatagaattaacttcatcagaaaaattattctcatca |
34491538 |
T |
 |
| Q |
480 |
cttcaacatagaa |
492 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
34491539 |
cttcaccatagaa |
34491551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 1547337 - 1547277
Alignment:
| Q |
445 |
atagagttaactttacca-aaaagttattctcataacttcaacatagaattttccttttaa |
504 |
Q |
| |
|
|||| |||||||| |||| |||||| |||||||| |||||| ||||||||||||||||||| |
|
|
| T |
1547337 |
atagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttccttttaa |
1547277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 37619022 - 37619080
Alignment:
| Q |
445 |
atagagttaactttaccaaaaa-gttattctcataacttcaacatagaattttcctttt |
502 |
Q |
| |
|
|||| |||||||| |||||||| || ||||| ||||||||| ||||||||||||||||| |
|
|
| T |
37619022 |
atagtgttaacttcaccaaaaaagtcattcttataacttcaccatagaattttcctttt |
37619080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 501
Target Start/End: Original strand, 4964062 - 4964098
Alignment:
| Q |
465 |
aagttattctcataacttcaacatagaattttccttt |
501 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
4964062 |
aagtaattctcataacttcaccatagaattttccttt |
4964098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 507
Target Start/End: Complemental strand, 48620668 - 48620624
Alignment:
| Q |
463 |
aaaagttattctcataacttcaacatagaattttccttttaagaa |
507 |
Q |
| |
|
|||||| ||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
48620668 |
aaaagtcattttaataacttcaacatagaattttcctttttagaa |
48620624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 83; Significance: 5e-39; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 309 - 500
Target Start/End: Original strand, 40640496 - 40640684
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgca---ataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgac |
405 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||| |||||||| | ||||||||||| ||| |||| |
|
|
| T |
40640496 |
tttaattttgatttaatcaaggacacaattgcagcaataagtaaaaatataatgacacatcttatgggcaaatgt---gcaatacaccatataatatgac |
40640592 |
T |
 |
| Q |
406 |
gcgacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
| |||||| ||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
40640593 |
gtgacatggattaaatacacaaatgctcaatgattgaccat----ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt |
40640684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 308 - 498
Target Start/End: Original strand, 49359492 - 49359676
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| |||| ||| ||||| |
|
|
| T |
49359492 |
gtttaattttgatttaatcagggacacaattgcattaagtaaagatataatgacacaccttatgagcaaat---gtgcaatacatcatataatatgacgt |
49359588 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttac-caaaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
| |||| ||||||||||||||| |||||||||| ||| ||||||| || ||||||| ||| |||| |||||| ||||||||||||| |
|
|
| T |
49359589 |
gtcatggattaaatacacaaatgttcaatgattggccat----ttaacttcacaaaaaaagtcattttcatgacttcaccatagaattttcc |
49359676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 7568583 - 7568712
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||| |||||| ||| ||||| |||| ||||||||| |
|
|
| T |
7568583 |
gtttaattttgatttaatcagagacacaattgtaataagtaaagatataatgacacactttatgtgcaaat---gtgcaatactgcatataatctgacgt |
7568679 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgatt |
440 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
7568680 |
gacatgaattaaatacacaaatgctcaatgatt |
7568712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 308 - 499
Target Start/End: Original strand, 45879351 - 45879547
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt--------cgtgtaatacaccatacaa |
399 |
Q |
| |
|
|||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||| || |
|
|
| T |
45879351 |
gtttaattttgatttaatcaggaaaacaatttcaataagtaaagatataacgacacaccttatgggcaaatgtgcaacaaatgtgcaatacaccatataa |
45879450 |
T |
 |
| Q |
400 |
tctgacgcgacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
||||||| | |||| ||||||||||||||| ||||||||||| ||| |||||||||||| |||||| |||||||| |||||| ||||||||||||| |
|
|
| T |
45879451 |
tctgacgtggcatggattaaatacacaaatgctcaatgattggccat----ttaactttaccagaaaagtcattctcatgacttcagcatagaattttcc |
45879546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 442
Target Start/End: Complemental strand, 44880974 - 44880844
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
44880974 |
gtttaattttgatttaatcagggacacaattgtaataagtaaagatataatgacac-ccttatgagcaaat---gtgcaatacaccatattatctgacgt |
44880879 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
|||||| |||||||||| |||| ||||||||||| |
|
|
| T |
44880878 |
gacatggattaaatacataaatgttcaatgattga |
44880844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 308 - 497
Target Start/End: Original strand, 19606778 - 19606961
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||| |
|
|
| T |
19606778 |
gtttaattttgatttaataagggacacgattgcaacaagtaaagatataatgacacaccttatggaaaaat---gttcaatacaccatataatctgacgt |
19606874 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttc |
497 |
Q |
| |
|
||| |||||||||||||||||| |||||| |||| |||| ||||||| |||| |||||| ||| | ||||||||| |||||||||||| |
|
|
| T |
19606875 |
gacctgaattaaatacacaaatgctcaatcattggtcat----ttaacttcaccagaaaagtcatttttataacttcaccatagaattttc |
19606961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 308 - 500
Target Start/End: Original strand, 38392492 - 38392678
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| ||| |||||| |||| |||||| | |
|
|
| T |
38392492 |
gtttaattttgatttaatcagggacacaattgcaataagtaaatatataatgacacacattatgggcaaat---gtgcaatacatcatataatctgtcat |
38392588 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
|||||| ||||||||||||||| ||||||| ||| ||| ||||||| ||| ||||||| |||||||| |||||| |||| ||||| |||| |
|
|
| T |
38392589 |
gacatggattaaatacacaaatgttcaatgactgaccat----ttaacttcaccaaaaaagtcattctcatgacttcaccatataatttccctt |
38392678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 308 - 502
Target Start/End: Original strand, 32180615 - 32180799
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| ||| ||| || ||||||||| |
|
|
| T |
32180615 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacacctta-ga-caaat---gtgcaat--accgtataatctgacgt |
32180707 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcctttt |
502 |
Q |
| |
|
||||| |||||||||||||||| |||||||||| | ||| ||||||| || | |||||| ||||||||||||||| | || ||||||| |||| |
|
|
| T |
32180708 |
gacataaattaaatacacaaatgctcaatgattaaccat----ttaacttcactagaaaagtcattctcataacttcaccgtacaattttcatttt |
32180799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 308 - 498
Target Start/End: Complemental strand, 42204528 - 42204342
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||| | | ||||||||||| |||| || | |
|
|
| T |
42204528 |
gtttaattttgatttaatcagg-actcaattgcaataagtaaagatata-tgacacaccttatgagtaaatat---gcaatacaccatataatccgatgt |
42204434 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
||||| ||||||||||||||| |||||| || | ||||| |||||||| | || |||||| ||||||| |||||| |||||||||||| |
|
|
| T |
42204433 |
gacatagattaaatacacaaatgctcaataataggtcatatggttaacttcatcagaaaagtcattctcacgacttcacgatagaattttcc |
42204342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 335 - 495
Target Start/End: Complemental strand, 4556702 - 4556543
Alignment:
| Q |
335 |
aattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacatg----aattaaatacacaaata |
430 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||| ||||||||| |||||| ||||||||||||||||| |
|
|
| T |
4556702 |
aattgtaataagtaaagatataatgacacacattatgagcaaat---gtgcaatacgccatataatctgacgtgacatgaattaattaaatacacaaata |
4556606 |
T |
 |
| Q |
431 |
ctcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattt |
495 |
Q |
| |
|
||||||||||| |||||| |||||| || | |||||| ||| |||| |||||| |||||||||| |
|
|
| T |
4556605 |
ctcaatgattggtcatag---taacttcacgagaaaagtcattttcatgacttcaccatagaattt |
4556543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 7758287 - 7758359
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
7758287 |
gtttaattttgatttaattagggacacaattgcaataagtaaagatataatgacgcaccttatgggcaaatgt |
7758359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 333 - 429
Target Start/End: Original strand, 53811865 - 53811958
Alignment:
| Q |
333 |
acaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacatgaattaaatacacaaat |
429 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||| |||||| |||||||||| |||| |
|
|
| T |
53811865 |
acaattgcattaagtaaagatataatgacacaccttatgtacaaat---gtggaatacaccatataatctgacgtgacatggattaaatacataaat |
53811958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 474
Target Start/End: Complemental strand, 43485495 - 43485331
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||| |||| | |||||| || ||| ||||||| ||||||| | |
|
|
| T |
43485495 |
gtttaattttaatttaatcagggactcaattacaataagtaaaaatataatgacacatcttaggggcaaat---atgcaatgcaccatataatctgaagt |
43485399 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattct |
474 |
Q |
| |
|
| ||||||||||||| |||| |||||||||| |||||| ||||||| |||| |||||| ||||| |
|
|
| T |
43485398 |
ggcatgaattaaatatgaaaatgttcaatgattggtcataggattaacttcaccagaaaagtcattct |
43485331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 47870375 - 47870304
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||| ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
47870375 |
gtttgattttgatttaatcaaggactcaattgcaatacgtaaagatataatgacacaccttatg-gcaaatgt |
47870304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 498
Target Start/End: Original strand, 47930531 - 47930714
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||| | |||| ||| ||||||||||| |||| || |
|
|
| T |
47930531 |
gtttaattttgatttaatgagggacacaattgcaataagtaaaggaataatgacacgtcttagggacaaa---ggtgcaatacaccatataatc-gatat |
47930626 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| |||| ||||||| |||| |||| | ||| |||| |||||| ||||||||||||| |
|
|
| T |
47930627 |
aacatggattaaatacacaaatgttcaatgattggtcat----ttaacttcaccagaaaaatcattttcatgacttcaccatagaattttcc |
47930714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 48155077 - 48155149
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
48155077 |
gtttaattttgatttaatcaaggacacaattgcaacaagtaaaaatatagtggtacaccatatgagcaaatgt |
48155149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 308 - 497
Target Start/End: Complemental strand, 26000716 - 26000525
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaat------- |
400 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| ||| |||| || |||||||| || ||| |
|
|
| T |
26000716 |
gtttaattttgatttaatcaatgacacaattgcaataagtaaagcgataatgacacactttacgagaaaat---atgcaatacaccgtataatcctataa |
26000620 |
T |
 |
| Q |
401 |
--ctgacgcgacatgaattaaatacacaaatactcaatgattgatcatagagttaactttaccaaaaagttattctcataacttcaacatagaattttc |
497 |
Q |
| |
|
|| ||| |||||||||||||||||||||| ||||| || |||||| |||| ||||||||||| ||||| ||||||||| | |||| ||||||| |
|
|
| T |
26000619 |
tcctaacgtgacatgaattaaatacacaaatgttcaataatcgatcat----ttaattttaccaaaaaattattttcataactttaccataaaattttc |
26000525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 47870531 - 47870478
Alignment:
| Q |
29 |
aaaggtatggttggtgttggaccagatgaatttttgagcgaagggtatgaacaa |
82 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||| |
|
|
| T |
47870531 |
aaaggtatggttggtgttggagcagatgaattttagagtgaatggtatgaacaa |
47870478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 371
Target Start/End: Complemental strand, 51878298 - 51878235
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatg |
371 |
Q |
| |
|
|||||||||| |||||||| | |||||||||||||||||||| ||||||| |||||| ||||| |
|
|
| T |
51878298 |
gtttaatttttatttaatcggagacacaattgcaataagtaacaatataataacacacattatg |
51878235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 441
Target Start/End: Complemental strand, 54606890 - 54606760
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||| ||||||||| || ||||||||||||||||||| ||||| |||||| |||||| |||| ||| |||||||| || || |||| |
|
|
| T |
54606890 |
gtttaattttaatttaatcaagggcacaattgcaataagtaaaaatatagcagcacaccgtatgagtaaat---gtgcaatacaccgtatgatttgacat |
54606794 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattg |
441 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| |
|
|
| T |
54606793 |
gacatacattaaatacacaaatgttcaatgattg |
54606760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 11018600 - 11018554
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatat |
355 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||| |||| |
|
|
| T |
11018600 |
tttaattttgatttaattagggatacaattgcaataagtaaaaatat |
11018554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 18272163 - 18272218
Alignment:
| Q |
386 |
aatacaccatacaatctgacgcgacatgaattaaatacacaaatactcaatgattg |
441 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||||||||||| |||||||||| |
|
|
| T |
18272163 |
aatacaccatataatctgacttgatatgaattaaatacacaaatgttcaatgattg |
18272218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 47870293 - 47870210
Alignment:
| Q |
420 |
atacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttcctttt |
502 |
Q |
| |
|
||||||||||| |||||| ||| ||||| ||||||| | | ||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
47870293 |
atacacaaatattcaatggttggtcataagattaacttcatcgaaaaagtcattctcataacttcagtatagaattttcctttt |
47870210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 499
Target Start/End: Original strand, 7327632 - 7327669
Alignment:
| Q |
462 |
aaaaagttattctcataacttcaacatagaattttcct |
499 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
7327632 |
aaaaagtcattctcataacttcaccatagaattttcct |
7327669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 29896048 - 29895976
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgt |
380 |
Q |
| |
|
|||||||||||||||||||| |||| ||||| |||| || || ||||| || ||||| ||||||||||||| |
|
|
| T |
29896048 |
gtttaattttgatttaatcaaggacccaattccaatgggttaaaatatagtggtacaccgtatgagcaaatgt |
29895976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 308 - 498
Target Start/End: Original strand, 8133423 - 8133609
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||| |||||||||||| ||||||| |||||| |||| ||||||||||| ||||||||| |
|
|
| T |
8133423 |
gtttaattttgatttaattagggacgcaattgcaataagtaatgatataatgacagaccttataagcaaa---cgtgcaatacaccatataatctgacgt |
8133519 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacc-aaaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
| | |||||||||||||||||| || ||||||||||||| ||||||| ||| ||||||||||||| || |||||| ||||||||||| |
|
|
| T |
8133520 |
gtcttgaattaaatacacaaatgcttaatgattgatcat--ttttaacttcaccaaaaaagttattcttatgacttcacagtagaattttcc |
8133609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 308 - 499
Target Start/End: Original strand, 22955176 - 22955361
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||| ||| ||||| |
|
|
| T |
22955176 |
gtttaatgttgatttaataagggacacaattgcaataagtaaagatacaatgacataccttatgagcaaat---gtgcaatacaccatataatttgacgt |
22955272 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcct |
499 |
Q |
| |
|
|||||| ||||||||||||||| ||||| ||||| ||| ||||||| |||| |||||| |||||||| |||||| ||||| ||||||| |
|
|
| T |
22955273 |
gacatggattaaatacacaaatgttcaataattgaccat----ttaacttcaccagaaaagtcattctcattacttcaccatagttttttcct |
22955361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 7743103 - 7742968
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||| ||||| ||| |
|
|
| T |
7743103 |
gtttaattttaatttaatcaggggcacaattgcaataagtaaagatataatgacacgccttatggacaaat---gtacaatacaccatataatctaacgt |
7743007 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
7743006 |
gacatagattaaatacacaaatactcaatgattgatcat |
7742968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 442
Target Start/End: Original strand, 37854160 - 37854289
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||| ||||||||||| ||| ||||| |
|
|
| T |
37854160 |
gtttaattttgatttaatcagggacacaattgcaatcagtaaagatataa--acataccttatgagcaaat---gtgcaatacaccatataatgtgacgt |
37854254 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattga |
442 |
Q |
| |
|
|||||| ||||||||||||||| |||||| ||||| |
|
|
| T |
37854255 |
gacatggattaaatacacaaatgctcaataattga |
37854289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 313 - 498
Target Start/End: Original strand, 23402240 - 23402419
Alignment:
| Q |
313 |
attttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacat |
412 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| ||||||||||| | |||||| ||||| | | ||||||||||| ||| ||||| ||||| |
|
|
| T |
23402240 |
attttgatttaatcagggacacaattgaaataagtaaatatataatgacatatcttatggacaaat---gcgcaatacaccatataatatgacgtgacat |
23402336 |
T |
 |
| Q |
413 |
gaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||| ||||||| |||| |||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
23402337 |
gaattaaatacacagatgttcaatgattgaccat----ttaacttcaccagaaaagtcattctcatgacttcgccatagaattttcc |
23402419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 308 - 466
Target Start/End: Original strand, 4618619 - 4618770
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| ||| | ||||||||||||| |||| ||||||||||||| |||||| ||||| ||| ||||||||||| ||| ||| || |
|
|
| T |
4618619 |
gtttaattttgatttaatgaggtatacaattgcaataaataaatatataatgacacattttatgaacaaat---gtgcaatacaccatataatttgaagc |
4618715 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaactttaccaaaaa |
466 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
4618716 |
gacatgaattaaatacacaaatgttcaatgattagtcat----ttaactttaccaaaaa |
4618770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 5781700 - 5781567
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||||| || ||||||||||| || ||||| |
|
|
| T |
5781700 |
gtttaattttgatttaatcaaggacacaattgcaataaataaagatataatgacacattttatggtcaaat---atgcaatacaccatataa--tgacgt |
5781606 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
|||||| |||||||||||||||| | ||||||||||||| |
|
|
| T |
5781605 |
gacatggattaaatacacaaatatttaatgattgatcat |
5781567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 308 - 436
Target Start/End: Complemental strand, 19786468 - 19786343
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||| ||| || |||| ||| ||||| |
|
|
| T |
19786468 |
gtttaattttgatttaatcaaggactcaattgcaataagtaaagatataatgacacaccttacagacaaat---gtgcaatgcatcatataatatgacgt |
19786372 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaat |
436 |
Q |
| |
|
| |||||||||||||||||||| |||||| |
|
|
| T |
19786371 |
ggcatgaattaaatacacaaatgctcaat |
19786343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 49002408 - 49002275
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | | |||||| | ||||||||||| ||||||| |
|
|
| T |
49002408 |
gtttaattttgatttaatcagacacacaattgcaataagtaaagatataatgacac--cttaagggaaaatgt---gcaatacaccatataatctgatat |
49002314 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcat |
446 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
49002313 |
ggtatggattaaatacacaaatactcaatgattgttcat |
49002275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 40382073 - 40382016
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaa-ttgcaataagtaaagatataatgacaca |
364 |
Q |
| |
|
|||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
40382073 |
gtttaatttttatttaattagggacacaaattgtaataagtaaagatataatgacaca |
40382016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 4902504 - 4902465
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagt |
347 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4902504 |
gtttaattttgatttaatcagggacactattgcaataagt |
4902465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 500
Target Start/End: Complemental strand, 40382016 - 40381938
Alignment:
| Q |
419 |
aatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
|||||| ||||||| ||||||| ||||| ||||||| |||| |||||| ||||||||||||||| | ||||||||||||| |
|
|
| T |
40382016 |
aatacataaatacttaatgattaatcat----ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcctt |
40381938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 8758474 - 8758426
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatata |
356 |
Q |
| |
|
|||||||||| ||||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
8758474 |
gtttaattttaatttaatcaagagcacaattgcaataagtaaaaatata |
8758426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0200 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0200
Description:
Target: scaffold0200; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 313 - 499
Target Start/End: Original strand, 24686 - 24866
Alignment:
| Q |
313 |
attttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgcgacat |
412 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||||| ||||||| | ||||||||||| ||||||||| ||||| |
|
|
| T |
24686 |
attttgatttaatcagggacacaattggaataagtaaatatataataacataccttatgggcaaatgc---gcaatacaccatataatctgacgtgacat |
24782 |
T |
 |
| Q |
413 |
gaattaaatacacaaatactcaatgattgatcatagagttaactttacca-aaaagttattctcataacttcaacatagaattttcct |
499 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| |||| || |||| |||| | ||||||||||||| |||||||||||||| |
|
|
| T |
24783 |
gaattaaatacacaaatgctcaatgattgaccat----ttaatttcaccagaaaaatcattctcataactttgccatagaattttcct |
24866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 5774 - 5645
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||| |||||| ||| ||||||||||| ||||| || |
|
|
| T |
5774 |
gtttaattttgatttaatgagggacataattgcaataaggaaatatataatgacacaccttataggcaaat---gtgcaatacaccatataatctaacat |
5678 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgatt |
440 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
5677 |
gacatgaattaaatacacaaatgctcaatgatt |
5645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0312 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0312
Description:
Target: scaffold0312; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 308 - 500
Target Start/End: Original strand, 8995 - 9185
Alignment:
| Q |
308 |
gtttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgagcaaatgtcgtgtaatacaccatacaatctgacgc |
407 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||| || |||| ||| |||| || || ||| |||| |
|
|
| T |
8995 |
gtttaattttgatttaatcaaggacacaattgcaattagtaaagatataatggaacatcgtataagtaaat---gtgcaataaactgtataatttgacat |
9091 |
T |
 |
| Q |
408 |
gacatgaattaaatacacaaatactcaatgattgatcatagagttaacttta-ccaaaaagttattctcataacttcaacatagaattttcctt |
500 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||||| | |||| | | ||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
9092 |
gacatacattaaatacacaaatgttcaatgattgatcattctcatgacttcagcaaaaaagtcattctcataacttcatcatagaattttcctt |
9185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 12031 - 12093
Alignment:
| Q |
309 |
tttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatg |
371 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
12031 |
tttaattttgatttaatcaggaacacaattgcaataagtaaatatataatgacacatcttatg |
12093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 498
Target Start/End: Original strand, 12137 - 12186
Alignment:
| Q |
450 |
gttaactttacca-aaaagttattctcataacttcaacatagaattttcc |
498 |
Q |
| |
|
|||||||| |||| |||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
12137 |
gttaacttcaccagaaaagtcattctcataacttcatcatagaattttcc |
12186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 65395 - 65362
Alignment:
| Q |
29 |
aaaggtatggttggtgttggaccagatgaatttt |
62 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
65395 |
aaaggtatggttggtgttggagcagatgaatttt |
65362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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