View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3889_low_1 (Length: 852)

Name: NF3889_low_1
Description: NF3889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3889_low_1
NF3889_low_1
[»] scaffold0014 (3 HSPs)
scaffold0014 (17-838)||(74996-75813)
scaffold0014 (290-336)||(75781-75827)
scaffold0014 (621-662)||(67893-67934)
[»] chr3 (17 HSPs)
chr3 (692-758)||(22098714-22098780)
chr3 (692-756)||(27849913-27849977)
chr3 (690-758)||(36468796-36468864)
chr3 (692-758)||(9990129-9990195)
chr3 (698-758)||(7652590-7652650)
chr3 (692-748)||(20962620-20962676)
chr3 (690-758)||(48167551-48167619)
chr3 (691-758)||(4742363-4742430)
chr3 (692-755)||(52307447-52307510)
chr3 (692-758)||(37023424-37023490)
chr3 (692-741)||(2357910-2357959)
chr3 (691-758)||(8626357-8626425)
chr3 (692-748)||(11257847-11257903)
chr3 (691-758)||(23383038-23383106)
chr3 (692-758)||(10385431-10385498)
chr3 (691-741)||(27104773-27104823)
chr3 (692-758)||(33248723-33248789)
[»] chr8 (13 HSPs)
chr8 (691-758)||(27348760-27348827)
chr8 (692-758)||(13848689-13848755)
chr8 (691-758)||(41576692-41576759)
chr8 (692-758)||(8742645-8742711)
chr8 (692-758)||(9067529-9067595)
chr8 (692-758)||(11308349-11308415)
chr8 (691-758)||(22181310-22181377)
chr8 (692-758)||(3299535-3299601)
chr8 (691-758)||(16959285-16959351)
chr8 (692-758)||(28370827-28370894)
chr8 (691-755)||(16583113-16583178)
chr8 (692-757)||(34006135-34006200)
chr8 (700-758)||(28925512-28925571)
[»] chr7 (19 HSPs)
chr7 (691-758)||(6173249-6173316)
chr7 (689-758)||(12089818-12089887)
chr7 (698-758)||(2632130-2632190)
chr7 (691-758)||(2478394-2478461)
chr7 (691-758)||(31879332-31879399)
chr7 (692-758)||(8107250-8107316)
chr7 (692-758)||(10345668-10345734)
chr7 (692-753)||(22825347-22825408)
chr7 (698-758)||(23795827-23795887)
chr7 (700-758)||(19471604-19471662)
chr7 (702-758)||(3544250-3544306)
chr7 (691-758)||(12184593-12184661)
chr7 (692-758)||(22321162-22321229)
chr7 (692-758)||(31157637-31157704)
chr7 (693-748)||(31663875-31663930)
chr7 (702-741)||(45500083-45500122)
chr7 (706-748)||(2796939-2796981)
chr7 (692-738)||(12191596-12191642)
chr7 (695-748)||(4704755-4704808)
[»] chr6 (11 HSPs)
chr6 (692-758)||(21595890-21595956)
chr6 (692-741)||(6778306-6778355)
chr6 (692-758)||(5670638-5670705)
chr6 (691-758)||(32806124-32806191)
chr6 (690-755)||(16698646-16698711)
chr6 (692-748)||(24160616-24160672)
chr6 (700-758)||(8667665-8667723)
chr6 (692-742)||(14479851-14479901)
chr6 (691-755)||(3539784-3539849)
chr6 (692-740)||(15643155-15643203)
chr6 (692-758)||(25055919-25055985)
[»] chr5 (15 HSPs)
chr5 (695-748)||(34869109-34869162)
chr5 (691-748)||(42801049-42801106)
chr5 (690-758)||(9405158-9405226)
chr5 (690-758)||(30606436-30606504)
chr5 (692-742)||(6270640-6270690)
chr5 (692-758)||(11722638-11722704)
chr5 (690-755)||(33435339-33435404)
chr5 (698-758)||(34457029-34457089)
chr5 (691-758)||(16903970-16904037)
chr5 (692-758)||(7315938-7316004)
chr5 (692-758)||(14345194-14345260)
chr5 (691-753)||(24836461-24836523)
chr5 (692-758)||(27166460-27166526)
chr5 (692-758)||(31846680-31846746)
chr5 (692-758)||(11767488-11767555)
[»] chr4 (18 HSPs)
chr4 (690-758)||(5272923-5272991)
chr4 (691-758)||(21668265-21668332)
chr4 (691-758)||(21677029-21677096)
chr4 (692-758)||(22048415-22048481)
chr4 (692-758)||(35416058-35416124)
chr4 (700-758)||(4838506-4838564)
chr4 (692-758)||(19730882-19730948)
chr4 (692-758)||(40994909-40994975)
chr4 (692-741)||(20949498-20949546)
chr4 (692-748)||(46691400-46691455)
chr4 (692-748)||(52619246-52619302)
chr4 (692-758)||(324172-324239)
chr4 (692-758)||(26070461-26070527)
chr4 (700-758)||(33239650-33239708)
chr4 (692-758)||(55327505-55327571)
chr4 (691-748)||(26372992-26373049)
chr4 (698-758)||(44428757-44428818)
chr4 (692-748)||(1188708-1188764)
[»] chr2 (18 HSPs)
chr2 (690-758)||(8679155-8679223)
chr2 (689-748)||(24662486-24662545)
chr2 (691-758)||(42700335-42700402)
chr2 (690-748)||(23924392-23924450)
chr2 (692-758)||(31759012-31759078)
chr2 (692-758)||(36667250-36667316)
chr2 (691-758)||(29224448-29224516)
chr2 (691-758)||(29337747-29337815)
chr2 (692-748)||(43992256-43992312)
chr2 (692-755)||(13229704-13229767)
chr2 (694-748)||(28006828-28006882)
chr2 (692-758)||(36556924-36556990)
chr2 (692-741)||(27258135-27258184)
chr2 (690-758)||(14701378-14701446)
chr2 (691-758)||(9783633-9783700)
chr2 (692-755)||(36039624-36039687)
chr2 (692-758)||(28457239-28457305)
chr2 (692-741)||(32523681-32523730)
[»] chr1 (13 HSPs)
chr1 (690-758)||(40999464-40999532)
chr1 (691-758)||(39000542-39000609)
chr1 (692-758)||(9667058-9667124)
chr1 (692-758)||(13217410-13217476)
chr1 (690-748)||(16131245-16131303)
chr1 (692-758)||(16832145-16832211)
chr1 (692-742)||(11738160-11738210)
chr1 (691-758)||(431701-431769)
chr1 (698-758)||(33491566-33491626)
chr1 (712-758)||(12167598-12167644)
chr1 (692-758)||(38121294-38121360)
chr1 (692-741)||(25242563-25242612)
chr1 (692-748)||(20225724-20225780)
[»] scaffold0015 (1 HSPs)
scaffold0015 (691-758)||(175335-175402)
[»] scaffold0298 (2 HSPs)
scaffold0298 (692-758)||(11566-11632)
scaffold0298 (692-758)||(15336-15402)
[»] scaffold0159 (1 HSPs)
scaffold0159 (692-758)||(28261-28327)
[»] scaffold0019 (2 HSPs)
scaffold0019 (689-758)||(168767-168836)
scaffold0019 (691-758)||(115929-115996)
[»] scaffold0060 (1 HSPs)
scaffold0060 (691-739)||(6269-6317)
[»] scaffold0002 (1 HSPs)
scaffold0002 (698-758)||(349974-350034)
[»] scaffold0336 (1 HSPs)
scaffold0336 (692-758)||(9476-9543)
[»] scaffold0124 (1 HSPs)
scaffold0124 (692-758)||(12928-12995)
[»] scaffold0076 (1 HSPs)
scaffold0076 (692-758)||(25011-25078)
[»] scaffold0147 (1 HSPs)
scaffold0147 (692-742)||(7480-7530)
[»] scaffold0444 (1 HSPs)
scaffold0444 (698-758)||(11854-11915)


Alignment Details
Target: scaffold0014 (Bit Score: 635; Significance: 0; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 635; E-Value: 0
Query Start/End: Original strand, 17 - 838
Target Start/End: Original strand, 74996 - 75813
Alignment:
Q  17 aatatcttacaatgagcacaatataattgttgtttttcatactgcattactacattgaaagcatgtccttctctctcaaccatcactaaatcaaacaact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  74996 aatatcttacaatcagcacaatataattgttgtttttcatactgcattactacattgaaagcatgtccctctctctcaaccatcactgaatcaaacaact 75095  T
Q  117 tttctgacatgtcaacatcaacaagaactctagcataaagcccaaaaagcctagattaggtggcttcatctatagtcaaaggggttccaatacctgaagc 216  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     ||     
T  75096 tttctgacatgtcaacatcatcaagaactctagcataaagcccaaaaagcctagattaggtggtttcatctatagtcaaaggggttccaata-----agt 75190  T
Q  217 aatttcatacagtgttttcttcctccagtattcttgcggcaaatgcattaacgagatccataacagcacatatgtttggacctggtgctgtaaaatgaag 316  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||| |||||||||||||||||||  |||||||    
T  75191 aatttcatacagtgttttcttcctccagtattcttgcgaaaaatgcattaacaagatccataacagcgcatgtgtttggacctggtgctgtgcaatgaag 75290  T
Q  317 tctctagtccaaccgtaaaatttcaaatttccaagtttgaggttaacaactcctaaagcccaaatattcctcatgtcttccacaaagtgacatttgaact 416  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  75291 tctctggtccaaccgtaaaatttcaaaattccaagtttgaggttaacatctcctaaagcccaaatattcctcatgtcttccacagagtgacatttgaact 75390  T
Q  417 cattgaacccctttcccagtggtatcactgaccaatttgtcaataagggccacaaa-cctcaagcttcatcttcaatgccttagtcgttaatgaggaatc 515  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  75391 catagaacccctttcccagtgctatcactgaccaatttgtcaataagggccacaaaccctcaagcttcatcttcaatgccttagtcgttaatgaggaatc 75490  T
Q  516 ccacttgttcaacgtcaacttcccatggagctttctcttgcaatcggccatacccgattcatactcatcttgagatattttcactcccaccctaaacatc 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||| |||||| ||    
T  75491 ccacttgttcaacgtcaacttcccatggagctttctcttgcaatcggcgatacccgattcgtactcatcctgagatattttcactctcacgctaaacgtc 75590  T
Q  616 ccacctttcaccttaatagatgaatttctagctaataggctacttgatag-nnnnnnntgattactacttttgtgattgatgtaggatttttacatgtca 714  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||        |||||||||||||||||||||||||| |||||||||||||||    
T  75591 ccacctttcaccttaatagatgaatttctagctaataggct-cttgaaagaaaaaaaatgattactacttttgtgattgatgtaagatttttacatgtca 75689  T
Q  715 taaaactatttacatgtgagtataatagaatcgtgtccacagggtccaaatcataagcatttaaacgatttaaactacattgaagtctctggtttggacc 814  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  75690 taaaactatttacacgtgagtataataggatcgtgtccacaaggtccaaatcataagcatttaaacgatttaaactacattgaagtctcaggtttggacc 75789  T
Q  815 tggtgttgtgcaatgaagtctctg 838  Q
    ||||||||||||||||||||||||    
T  75790 tggtgttgtgcaatgaagtctctg 75813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 75781 - 75827
Alignment:
Q  290 gtttggacctggtgctgtaaaatgaagtctctagtccaaccgtaaaa 336  Q
    |||||||||||||| |||  |||||||||||| ||||||||||||||    
T  75781 gtttggacctggtgttgtgcaatgaagtctctggtccaaccgtaaaa 75827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 662
Target Start/End: Original strand, 67893 - 67934
Alignment:
Q  621 tttcaccttaatagatgaatttctagctaataggctacttga 662  Q
    ||||||||||| |||||||||| |||||||||||||| ||||    
T  67893 tttcaccttaagagatgaatttttagctaataggctatttga 67934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 9e-20; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 22098780 - 22098714
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  22098780 tgatgaaggatttttccatctcataaaactatttacatgtgagtataataggatcgtgtccacaggg 22098714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 692 - 756
Target Start/End: Original strand, 27849913 - 27849977
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacag 756  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  27849913 tgatgaaggatttttccatctcataaaactatttacatgtgagtataataggatcgtgtccacag 27849977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 690 - 758
Target Start/End: Original strand, 36468796 - 36468864
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  36468796 attgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 36468864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 9990195 - 9990129
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  9990195 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 9990129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 698 - 758
Target Start/End: Original strand, 7652590 - 7652650
Alignment:
Q  698 aggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  7652590 aggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 7652650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 692 - 748
Target Start/End: Original strand, 20962620 - 20962676
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||    
T  20962620 tgatgtaggatttttacatctcataaaactatttacacgtaagtataataggatcgt 20962676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 690 - 758
Target Start/End: Original strand, 48167551 - 48167619
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||| ||||||||||||||||||||||||||| | || |||||||||| ||||| || ||||||    
T  48167551 attgatgtaagatttttacatgtcataaaactatttatacgtaagtataataggatcgtttcgacaggg 48167619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 4742363 - 4742430
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| |||||||||||||  |||||||||||||| ||||||||||||| ||||| ||| |||||    
T  4742363 ttgatgtaagatttttacatgtattaaaactatttacacgtgagtataataggatcgtttccgcaggg 4742430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 692 - 755
Target Start/End: Original strand, 52307447 - 52307510
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccaca 755  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| ||||||||||||    
T  52307447 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 52307510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 37023490 - 37023424
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||| ||||||||||||||||| || |||||||||  |||| ||||||||||    
T  37023490 tgatgtaagatttttacatctcataaaactatttacacgtaagtataatatgatcgagtccacaggg 37023424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 692 - 741
Target Start/End: Complemental strand, 2357959 - 2357910
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataata 741  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||    
T  2357959 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataata 2357910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 8626425 - 8626357
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  8626425 ttgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 8626357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 748
Target Start/End: Original strand, 11257847 - 11257903
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||||||||||||||| |||||||||||||||||  | |||||||||| |||||    
T  11257847 tgatgtaggatttttacatctcataaaactatttacacataagtataataggatcgt 11257903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 23383106 - 23383038
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  23383106 ttgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 23383038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 10385431 - 10385498
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  10385431 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 10385498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 691 - 741
Target Start/End: Complemental strand, 27104823 - 27104773
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataata 741  Q
    |||||||| ||||||||||||||||| ||||||||| | ||||||||||||    
T  27104823 ttgatgtaagatttttacatgtcatataactatttataagtgagtataata 27104773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 33248789 - 33248723
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| |||||||||||||||||||||||||||||  | | |||||||| ||||| ||| |||||    
T  33248789 tgatgtaagatttttacatgtcataaaactatttacacataattataataggatcgtttccgcaggg 33248723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 6e-18; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 27348827 - 27348760
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||    
T  27348827 ttgatgaaggatttttacctctcataaaactatttacacgtaagtataatagaatcgtgtccacaggg 27348760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 13848689 - 13848755
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||    
T  13848689 tgatgtaagatttttacatgtcataaaactatttacaagtgagtataataggatcgtttccgcaggg 13848755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 41576692 - 41576759
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  41576692 ttgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 41576759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 8742645 - 8742711
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  8742645 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 8742711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 9067529 - 9067595
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  9067529 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 9067595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 11308349 - 11308415
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  11308349 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 11308415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 22181377 - 22181310
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||| ||||||||| ||| ||||||||||||| ||| || |||||||||| |||||||||||||||    
T  22181377 ttgatgaaggatttttccatctcataaaactattcacacgtaagtataataggatcgtgtccacaggg 22181310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 3299601 - 3299535
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | |||||||||||||||||  | |||||||||| |||||||||||||||    
T  3299601 tgatgaaggatttttacctctcataaaactatttacacataagtataataggatcgtgtccacaggg 3299535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 16959351 - 16959285
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||| ||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  16959351 ttgatgtaagatttttac-tgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 16959285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 28370894 - 28370827
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | |||||||||||||||||||| |||||| |||| |||||||||| ||||    
T  28370894 tgatgaaggatttttacctctcataaaactatttacatgtaagtatatataggatcgtgtccataggg 28370827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 691 - 755
Target Start/End: Complemental strand, 16583178 - 16583113
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccaca 755  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||| |||| ||||||||||||    
T  16583178 ttgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccaca 16583113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 757
Target Start/End: Original strand, 34006135 - 34006200
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacagg 757  Q
    ||||| ||| ||||| ||| |||||||||||||| || || |||||||||| ||||||||||||||    
T  34006135 tgatgaaggttttttccatctcataaaactatttgcacgtaagtataataggatcgtgtccacagg 34006200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 758
Target Start/End: Original strand, 28925512 - 28925571
Alignment:
Q  700 gatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  28925512 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 28925571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 6e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 6173316 - 6173249
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | |||||||||||||||||||| |||||||||| |||||||||||||||    
T  6173316 ttgatgaaggatttttacctctcataaaactatttacatgtaagtataataggatcgtgtccacaggg 6173249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 689 - 758
Target Start/End: Original strand, 12089818 - 12089887
Alignment:
Q  689 gattgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  12089818 gattgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 12089887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 698 - 758
Target Start/End: Complemental strand, 2632190 - 2632130
Alignment:
Q  698 aggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  2632190 aggatttttacctctcataaaactatttacacgtgagtataataggatcgtgtccacaggg 2632130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 2478461 - 2478394
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  2478461 ttgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 2478394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 31879399 - 31879332
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  31879399 ttgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 31879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 8107250 - 8107316
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  8107250 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 8107316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 10345668 - 10345734
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  10345668 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 10345734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 692 - 753
Target Start/End: Complemental strand, 22825408 - 22825347
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtcca 753  Q
    ||||| ||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  22825408 tgatgaaggatttttccatctcataaaactatttacacgtgagtataataggatcgtgtcca 22825347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 698 - 758
Target Start/End: Complemental strand, 23795887 - 23795827
Alignment:
Q  698 aggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  23795887 aggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 23795827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 758
Target Start/End: Original strand, 19471604 - 19471662
Alignment:
Q  700 gatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||| ||||||||||||||||| || |||||||||| |||||||||||||||    
T  19471604 gatttttccatctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 19471662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 702 - 758
Target Start/End: Original strand, 3544250 - 3544306
Alignment:
Q  702 tttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||||||||||||||||||||| || ||||||||||||| || ||| |||||    
T  3544250 tttttacatgtcataaaactatttacaagtaagtataatagaattgtttccgcaggg 3544306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 12184661 - 12184593
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||||| |||| ||||  |||||||||    
T  12184661 ttgatgtaagatttttacatctcataaaactatttacacgtgagtatatataggatcgaatccacaggg 12184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 22321162 - 22321229
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  22321162 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 22321229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 31157637 - 31157704
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  31157637 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 31157704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 693 - 748
Target Start/End: Original strand, 31663875 - 31663930
Alignment:
Q  693 gatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    |||||| ||||||||||||||||||||| ||||||| || |||||||||| |||||    
T  31663875 gatgtaagatttttacatgtcataaaaccatttacacgtaagtataataggatcgt 31663930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 702 - 741
Target Start/End: Original strand, 45500083 - 45500122
Alignment:
Q  702 tttttacatgtcataaaactatttacatgtgagtataata 741  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  45500083 tttttacatgtcatagaactatttacacgtgagtataata 45500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 706 - 748
Target Start/End: Original strand, 2796939 - 2796981
Alignment:
Q  706 tacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||||||||||||||||||| || |||||||||| |||||    
T  2796939 tacatgtcataaaactatttacacgtaagtataataggatcgt 2796981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 738
Target Start/End: Complemental strand, 12191642 - 12191596
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata 738  Q
    ||||||| ||||||||||  ||||||||||||||||| |||||||||    
T  12191642 tgatgtaagatttttacaactcataaaactatttacacgtgagtata 12191596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 695 - 748
Target Start/End: Original strand, 4704755 - 4704808
Alignment:
Q  695 tgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    |||| |||||||||||||   ||||||||||||| || ||||||||||||||||    
T  4704755 tgtaagatttttacatgtataaaaactatttacacgtaagtataatagaatcgt 4704808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 21595890 - 21595956
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||    
T  21595890 tgatgtaagatttttacatgtcataaaactatttacacgtgagtataataggatcgtttccgcaggg 21595956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 692 - 741
Target Start/End: Complemental strand, 6778355 - 6778306
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataata 741  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6778355 tgatgtaagatttttacatgtcataaaactatttacatgtgagtataata 6778306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 5670638 - 5670705
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  5670638 tgatgtaggatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacaggg 5670705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 32806124 - 32806191
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||| |||| ||||| |||||||||    
T  32806124 ttgatgtaagatttttacatgtcataaaactatttacacgtaagtatgataggatcgtttccacaggg 32806191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 690 - 755
Target Start/End: Complemental strand, 16698711 - 16698646
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccaca 755  Q
    ||||||| ||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||    
T  16698711 attgatgaaggatttttccatctcataaaactatttacacgtgagtataataggattgtgtccaca 16698646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 692 - 748
Target Start/End: Original strand, 24160616 - 24160672
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  24160616 tgatgtaagatttttacatgtcataaaactattaacatgtaagtataataggatcgt 24160672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 758
Target Start/End: Complemental strand, 8667723 - 8667665
Alignment:
Q  700 gatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  8667723 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 8667665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 742
Target Start/End: Complemental strand, 14479901 - 14479851
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatag 742  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  14479901 tgatgtaagatttttacatctcataaaactatttacatgtaagtataatag 14479851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 691 - 755
Target Start/End: Complemental strand, 3539849 - 3539784
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccaca 755  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||| |||| ||||||||||||    
T  3539849 ttgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccaca 3539784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 692 - 740
Target Start/End: Complemental strand, 15643203 - 15643155
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataat 740  Q
    ||||||| ||||||||||||||||| || |||||||| |||||||||||    
T  15643203 tgatgtaagatttttacatgtcatataagtatttacacgtgagtataat 15643155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 25055919 - 25055985
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| |||||||||||||  |||||||||||||| || |||||||||  ||||| ||| |||||    
T  25055919 tgatgtaagatttttacatgtattaaaactatttacacgtaagtataataagatcgtttccgcaggg 25055985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 9e-17; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 695 - 748
Target Start/End: Original strand, 34869109 - 34869162
Alignment:
Q  695 tgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34869109 tgtaagatttttacatgtcataaaactatttacatgtgagtataataggatcgt 34869162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 691 - 748
Target Start/End: Complemental strand, 42801106 - 42801049
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||    
T  42801106 ttgatgtaggatttttacatgtcataaaactatttacacgtgactataataggatcgt 42801049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 690 - 758
Target Start/End: Complemental strand, 9405226 - 9405158
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  9405226 attgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 9405158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 690 - 758
Target Start/End: Original strand, 30606436 - 30606504
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  30606436 attgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 30606504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 742
Target Start/End: Complemental strand, 6270690 - 6270640
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatag 742  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  6270690 tgatgtaagatttttacatgtcataaaactatttacacgtgagtataatag 6270640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 11722638 - 11722704
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  11722638 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 11722704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 690 - 755
Target Start/End: Complemental strand, 33435404 - 33435339
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccaca 755  Q
    ||||||| ||||||||||| | ||||||||||||||||| || |||||||||| ||||||||||||    
T  33435404 attgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 33435339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 698 - 758
Target Start/End: Complemental strand, 34457089 - 34457029
Alignment:
Q  698 aggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  34457089 aggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 34457029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 16903970 - 16904037
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||| | ||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  16903970 ttgatgaaagatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 16904037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 7316004 - 7315938
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||| | | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  7316004 tgatgaaggatttttccctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 7315938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 14345260 - 14345194
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| || |||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  14345260 tgatgaagaatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 14345194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 691 - 753
Target Start/End: Complemental strand, 24836523 - 24836461
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtcca 753  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||||||| ||||||||||    
T  24836523 ttgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtcca 24836461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 27166460 - 27166526
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||| ||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  27166460 tgatgtaagatttttacatctcataaaactatttacacgtcagtataataggatcgtttccgcaggg 27166526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 31846746 - 31846680
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||| ||||    
T  31846746 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccataggg 31846680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 11767555 - 11767488
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  11767555 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 11767488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 3e-16; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 690 - 758
Target Start/End: Original strand, 5272923 - 5272991
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  5272923 attgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 5272991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 21668265 - 21668332
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  21668265 ttgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 21668332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 21677029 - 21677096
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  21677029 ttgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 21677096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 22048481 - 22048415
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  22048481 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 22048415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 35416058 - 35416124
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  35416058 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 35416124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 700 - 758
Target Start/End: Original strand, 4838506 - 4838564
Alignment:
Q  700 gatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  4838506 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 4838564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 19730882 - 19730948
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | |||||||||| || |||||| |||||||||| |||||||||||||||    
T  19730882 tgatgaaggatttttacctctcataaaacttttcacatgtaagtataataggatcgtgtccacaggg 19730948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 40994909 - 40994975
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||||  ||||| || ||||||    
T  40994909 tgatgtagtatttttacatgtcataaaactatttacacgtaagtataataagatcgtttctacaggg 40994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 692 - 741
Target Start/End: Complemental strand, 20949546 - 20949498
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataata 741  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  20949546 tgatgtaagatttttacatgtcataaa-ctatttacatgtgagtataata 20949498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 748
Target Start/End: Original strand, 46691400 - 46691455
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  46691400 tgatgtaagatttttacatgtgataaa-ctatttacatgtgagtataataggatcgt 46691455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 692 - 748
Target Start/End: Complemental strand, 52619302 - 52619246
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||| || |||||    
T  52619302 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataacaggatcgt 52619246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 324239 - 324172
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | |||||||||||||||||  |||||||| |||| |||||||||||||||    
T  324239 tgatgaaggatttttacctctcataaaactatttacacatgagtatatataggatcgtgtccacaggg 324172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 26070527 - 26070461
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| |||| ||||||||  |||||||||||||| ||||||||||||| ||||| ||| |||||    
T  26070527 tgatgtaagattcttacatgtattaaaactatttacacgtgagtataataggatcgtttccgcaggg 26070461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 700 - 758
Target Start/End: Complemental strand, 33239708 - 33239650
Alignment:
Q  700 gatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||| | |||| |||||||||||| || |||||||||| |||||||||||||||    
T  33239708 gatttttacctctcattaaactatttacacgtaagtataataggatcgtgtccacaggg 33239650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 55327571 - 55327505
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||| ||||||||||||||||| || |||||||||  ||||| ||| |||||    
T  55327571 tgatgtaagatttttacatatcataaaactatttacacgtaagtataatatgatcgtttccgcaggg 55327505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 691 - 748
Target Start/End: Original strand, 26372992 - 26373049
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    |||||||| ||||||||||| ||||||||||||||||| || ||||| |||| |||||    
T  26372992 ttgatgtaagatttttacatttcataaaactatttacacgtaagtatgataggatcgt 26373049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 758
Target Start/End: Original strand, 44428757 - 44428818
Alignment:
Q  698 aggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  44428757 aggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 44428818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 692 - 748
Target Start/End: Complemental strand, 1188764 - 1188708
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||| |||||||||||||  |||||||||||||| || |||||||||| |||||    
T  1188764 tgatgtaagatttttacatgtattaaaactatttacacgttagtataataggatcgt 1188708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 690 - 758
Target Start/End: Original strand, 8679155 - 8679223
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||| ||||||||||| ||||||||||||||||| || |||||||||| ||||| |||||||||    
T  8679155 attgatgtaagatttttacatctcataaaactatttacacgtaagtataataggatcgtttccacaggg 8679223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 689 - 748
Target Start/End: Original strand, 24662486 - 24662545
Alignment:
Q  689 gattgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  24662486 gattgatgtaagatttttacatgtcatataactatttacacgtgagtataataggatcgt 24662545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 42700335 - 42700402
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  42700335 ttgatgtaggatttttacatctcataaaactatttacacgtaagtataataggatcgtttccgcaggg 42700402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 690 - 748
Target Start/End: Original strand, 23924392 - 23924450
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  23924392 attgatgtaagatttgtacatgtcataaaactatttacacgtgagtataataggatcgt 23924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 31759078 - 31759012
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  31759078 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 31759012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 36667250 - 36667316
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||| ||| |||||    
T  36667250 tgatgtaagatttttacatgtattaaaactatttacatgtgagtataataggatcgtttccgcaggg 36667316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 29224516 - 29224448
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  29224516 ttgatgaaggatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacaggg 29224448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 29337815 - 29337747
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  29337815 ttgatgaaggatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacaggg 29337747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 692 - 748
Target Start/End: Complemental strand, 43992312 - 43992256
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||| |||||    
T  43992312 tgatgtatgatttttacatgtcataaaactatttacacgtaagtataataggatcgt 43992256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 692 - 755
Target Start/End: Original strand, 13229704 - 13229767
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccaca 755  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||  ||||| ||||||    
T  13229704 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccaca 13229767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 694 - 748
Target Start/End: Complemental strand, 28006882 - 28006828
Alignment:
Q  694 atgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||| |||||    
T  28006882 atgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgt 28006828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 36556924 - 36556990
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||  ||||| ||| |||||    
T  36556924 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccgcaggg 36556990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 692 - 741
Target Start/End: Complemental strand, 27258184 - 27258135
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataata 741  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||    
T  27258184 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataata 27258135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 690 - 758
Target Start/End: Complemental strand, 14701446 - 14701378
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||||  |||||||||||||||||||||||||||| || |||||||| | ||||| ||| |||||    
T  14701446 attgatgtaatatttttacatgtcataaaactatttacacgtaagtataattggatcgtttccgcaggg 14701378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 9783633 - 9783700
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| |||| ||||||||||||||||| |||||| || |||||||||| ||||| ||| |||||    
T  9783633 ttgatgtaagattattacatgtcataaaactctttacacgtaagtataataggatcgtttccgcaggg 9783700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 755
Target Start/End: Original strand, 36039624 - 36039687
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccaca 755  Q
    ||||| ||||||||| ||| ||||||||||||||||| || |||||||||| ||||||| ||||    
T  36039624 tgatgaaggatttttccatctcataaaactatttacacgtaagtataataggatcgtgttcaca 36039687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 28457239 - 28457305
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||  |||||||||||||||||||||||||||| || |||||||||  ||||| ||| |||||    
T  28457239 tgatgtaatatttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccgcaggg 28457305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 741
Target Start/End: Complemental strand, 32523730 - 32523681
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataata 741  Q
    ||||||| |||||||||||||||||||| |||||||| || | |||||||    
T  32523730 tgatgtaagatttttacatgtcataaaattatttacacgtaactataata 32523681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 690 - 758
Target Start/End: Original strand, 40999464 - 40999532
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  40999464 attgatgtaagatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcaggg 40999532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 39000542 - 39000609
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  39000542 ttgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 39000609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 9667058 - 9667124
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  9667058 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 9667124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 13217410 - 13217476
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||| ||| |||||    
T  13217410 tgatgtaagatttttacatgtcataaaattatttacacgtgagtataataggatcgtttccgcaggg 13217476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 690 - 748
Target Start/End: Complemental strand, 16131303 - 16131245
Alignment:
Q  690 attgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||||| |||||    
T  16131303 attgatgtaagatttttacatgtcataaaactatttacaagtaagtataataggatcgt 16131245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 16832145 - 16832211
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||| ||| |||||    
T  16832145 tgatgtaggttttttacatctcataaaactatttacacgtgagtataataggatcgtttccgcaggg 16832211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 742
Target Start/End: Original strand, 11738160 - 11738210
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatag 742  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||||||    
T  11738160 tgatgtaagatttttacatgtcataaaactatttacacgtaagtataatag 11738210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 431701 - 431769
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  431701 ttgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 431769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 758
Target Start/End: Original strand, 33491566 - 33491626
Alignment:
Q  698 aggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||||| | ||||||||||||||||| || |||||||||| |||||||| ||||||    
T  33491566 aggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtctacaggg 33491626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 712 - 758
Target Start/End: Original strand, 12167598 - 12167644
Alignment:
Q  712 tcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||    
T  12167598 tcataaaactatttacacgtaagtataataggatcgtgtccacaggg 12167644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 38121294 - 38121360
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | |||||||| |||||||| || |||||||||  |||||||||||||||    
T  38121294 tgatgaaggatttttacctctcataaaattatttacacgtaagtataataagatcgtgtccacaggg 38121360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 741
Target Start/End: Complemental strand, 25242612 - 25242563
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataata 741  Q
    ||||||| ||||||||||||| ||| ||||||||||| ||||||||||||    
T  25242612 tgatgtaagatttttacatgttatataactatttacacgtgagtataata 25242563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 692 - 748
Target Start/End: Original strand, 20225724 - 20225780
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgt 748  Q
    ||||||| || |||||||||||||||||||||||||| |  |||||||||| |||||    
T  20225724 tgatgtaagagttttacatgtcataaaactatttacacgaaagtataataggatcgt 20225780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 758
Target Start/End: Complemental strand, 175402 - 175335
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  175402 ttgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 11566 - 11632
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  11566 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 11632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 15336 - 15402
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  15336 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 15402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 28261 - 28327
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||||||| |||||||||||||||    
T  28261 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacaggg 28327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 689 - 758
Target Start/End: Original strand, 168767 - 168836
Alignment:
Q  689 gattgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||||| | ||||||||||| ||||| || |||||||||| |||||||||||||||    
T  168767 gattgatgaaggatttttacttctcataaaactacttacacgtaagtataataggatcgtgtccacaggg 168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 691 - 758
Target Start/End: Original strand, 115929 - 115996
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    |||||||| ||||||||||| |  |||||||||||||| ||||||||||||| ||||| ||| |||||    
T  115929 ttgatgtaagatttttacatatattaaaactatttacacgtgagtataataggatcgtttccgcaggg 115996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 691 - 739
Target Start/End: Complemental strand, 6317 - 6269
Alignment:
Q  691 ttgatgtaggatttttacatgtcataaaactatttacatgtgagtataa 739  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  6317 ttgatgtaagatttttacatgtcatataactatttacatgtgagtataa 6269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 698 - 758
Target Start/End: Original strand, 349974 - 350034
Alignment:
Q  698 aggatttttacatgtcataaaactatttacatgtgagtataatagaatcgtgtccacaggg 758  Q
    ||||||||||| | ||| ||||||||||||| || |||||||||| |||||||||||||||    
T  349974 aggatttttacctctcacaaaactatttacacgtaagtataataggatcgtgtccacaggg 350034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 9543 - 9476
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  9543 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 9476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Complemental strand, 12995 - 12928
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  12995 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 12928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 692 - 758
Target Start/End: Original strand, 25011 - 25078
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||| ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  25011 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 25078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 692 - 742
Target Start/End: Complemental strand, 7530 - 7480
Alignment:
Q  692 tgatgtaggatttttacatgtcataaaactatttacatgtgagtataatag 742  Q
    ||||| ||||||||||| | ||||||||||||||||| |||||||||||||    
T  7530 tgatgaaggatttttacctctcataaaactatttacacgtgagtataatag 7480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 758
Target Start/End: Original strand, 11854 - 11915
Alignment:
Q  698 aggatttttacatgtcataaaactatttacatgtgagtata-atagaatcgtgtccacaggg 758  Q
    ||||||||||| | ||||||||||||||||| || |||||| |||| |||||||||||||||    
T  11854 aggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacaggg 11915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University