View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3890_low_4 (Length: 651)

Name: NF3890_low_4
Description: NF3890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3890_low_4
NF3890_low_4
[»] chr5 (28 HSPs)
chr5 (23-632)||(28188603-28189225)
chr5 (570-630)||(38040267-38040327)
chr5 (569-612)||(11246546-11246589)
chr5 (569-612)||(25660912-25660955)
chr5 (569-612)||(35813294-35813337)
chr5 (566-611)||(41405141-41405186)
chr5 (579-612)||(42781646-42781679)
chr5 (569-612)||(6447532-6447576)
chr5 (569-609)||(17557030-17557070)
chr5 (564-612)||(36116929-36116977)
chr5 (569-608)||(3535992-3536031)
chr5 (574-612)||(9409002-9409041)
chr5 (569-612)||(20186866-20186909)
chr5 (569-612)||(22867044-22867087)
chr5 (569-612)||(36742019-36742062)
chr5 (569-612)||(40250229-40250272)
chr5 (569-611)||(28537135-28537177)
chr5 (569-627)||(31934912-31934970)
chr5 (568-612)||(1463869-1463914)
chr5 (569-629)||(9963415-9963476)
chr5 (571-612)||(29561645-29561686)
chr5 (569-612)||(6806692-6806736)
chr5 (572-608)||(17178278-17178314)
chr5 (569-613)||(31004181-31004225)
chr5 (572-608)||(31280602-31280638)
chr5 (572-612)||(31556821-31556861)
chr5 (580-612)||(31907662-31907694)
chr5 (580-612)||(38040144-38040176)
[»] chr4 (38 HSPs)
chr4 (575-631)||(42432014-42432070)
chr4 (568-611)||(56913-56956)
chr4 (569-631)||(36045830-36045892)
chr4 (570-614)||(17431378-17431422)
chr4 (568-612)||(20610738-20610782)
chr4 (569-612)||(49039497-49039540)
chr4 (569-631)||(38657540-38657602)
chr4 (569-612)||(4419738-4419781)
chr4 (574-609)||(12585614-12585649)
chr4 (569-612)||(12796666-12796709)
chr4 (569-612)||(20166316-20166359)
chr4 (569-612)||(41492550-41492593)
chr4 (566-616)||(25714501-25714551)
chr4 (569-614)||(53621200-53621245)
chr4 (568-612)||(1589209-1589253)
chr4 (572-612)||(14504685-14504725)
chr4 (569-612)||(36008274-36008318)
chr4 (569-609)||(44449522-44449562)
chr4 (569-612)||(48512198-48512242)
chr4 (569-613)||(53335308-53335352)
chr4 (570-612)||(9084759-9084802)
chr4 (569-608)||(15853822-15853861)
chr4 (569-612)||(27921896-27921939)
chr4 (569-612)||(43049985-43050028)
chr4 (569-612)||(49319393-49319436)
chr4 (569-612)||(54854231-54854274)
chr4 (578-612)||(37997898-37997932)
chr4 (572-613)||(8241424-8241465)
chr4 (569-613)||(30152127-30152172)
chr4 (567-612)||(42758215-42758260)
chr4 (568-612)||(56531288-56531333)
chr4 (569-612)||(2565260-2565304)
chr4 (569-612)||(12820457-12820501)
chr4 (569-609)||(20925093-20925132)
chr4 (569-612)||(28520783-28520827)
chr4 (579-611)||(30565364-30565396)
chr4 (569-609)||(39449400-39449440)
chr4 (569-612)||(53815695-53815739)
[»] chr1 (46 HSPs)
chr1 (569-612)||(18179328-18179371)
chr1 (569-612)||(9768861-9768904)
chr1 (569-612)||(18003816-18003859)
chr1 (570-614)||(28417328-28417372)
chr1 (572-612)||(47141858-47141898)
chr1 (570-614)||(47645846-47645890)
chr1 (575-614)||(2903077-2903116)
chr1 (569-612)||(42908771-42908814)
chr1 (569-612)||(43327010-43327053)
chr1 (569-612)||(52961134-52961177)
chr1 (569-611)||(1580829-1580871)
chr1 (570-612)||(4605894-4605936)
chr1 (569-631)||(7015720-7015782)
chr1 (570-628)||(9769616-9769674)
chr1 (569-611)||(9931087-9931129)
chr1 (569-614)||(5862128-5862173)
chr1 (569-618)||(9004346-9004395)
chr1 (568-612)||(1721139-1721183)
chr1 (569-612)||(9527425-9527469)
chr1 (572-612)||(18646691-18646731)
chr1 (576-612)||(50199528-50199564)
chr1 (573-612)||(3341788-3341827)
chr1 (569-612)||(7906378-7906421)
chr1 (569-628)||(9410364-9410422)
chr1 (569-612)||(37262157-37262200)
chr1 (569-628)||(42801879-42801938)
chr1 (569-612)||(43020611-43020654)
chr1 (569-612)||(46670896-46670939)
chr1 (562-612)||(5684115-5684165)
chr1 (570-612)||(33176155-33176197)
chr1 (571-612)||(47939250-47939292)
chr1 (568-609)||(3553336-3553377)
chr1 (580-609)||(3569055-3569084)
chr1 (568-612)||(13870133-13870178)
chr1 (580-629)||(13941330-13941379)
chr1 (568-612)||(195043-195087)
chr1 (569-609)||(3140358-3140398)
chr1 (569-612)||(29491469-29491513)
chr1 (569-609)||(33694542-33694582)
chr1 (569-612)||(39238715-39238759)
chr1 (569-612)||(40678822-40678866)
chr1 (569-612)||(47763437-47763481)
chr1 (569-609)||(49632293-49632333)
chr1 (579-611)||(50575911-50575943)
chr1 (569-613)||(51917553-51917597)
chr1 (569-612)||(52833158-52833202)
[»] chr7 (34 HSPs)
chr7 (568-628)||(1513486-1513546)
chr7 (569-611)||(17305443-17305485)
chr7 (572-612)||(35498401-35498441)
chr7 (569-612)||(8766863-8766906)
chr7 (573-612)||(24427367-24427406)
chr7 (569-608)||(38032911-38032950)
chr7 (569-612)||(43209401-43209444)
chr7 (569-612)||(43635588-43635631)
chr7 (569-628)||(45198134-45198193)
chr7 (569-611)||(8147239-8147281)
chr7 (570-612)||(32534637-32534679)
chr7 (570-608)||(43712369-43712407)
chr7 (569-611)||(44409201-44409243)
chr7 (569-614)||(7392356-7392401)
chr7 (575-612)||(23799306-23799343)
chr7 (569-609)||(3246541-3246581)
chr7 (569-605)||(14772394-14772430)
chr7 (569-605)||(15222846-15222882)
chr7 (569-612)||(21285405-21285449)
chr7 (572-612)||(35195846-35195886)
chr7 (576-615)||(2639626-2639665)
chr7 (569-612)||(7465466-7465509)
chr7 (569-612)||(32814827-32814870)
chr7 (569-612)||(37410533-37410576)
chr7 (574-612)||(10020521-10020559)
chr7 (579-613)||(19924777-19924811)
chr7 (568-612)||(20527481-20527526)
chr7 (583-612)||(32309200-32309229)
chr7 (568-612)||(38451861-38451906)
chr7 (568-609)||(41012636-41012677)
chr7 (569-612)||(14818417-14818461)
chr7 (569-612)||(15265415-15265459)
chr7 (569-612)||(31475892-31475936)
chr7 (569-612)||(41139086-41139130)
[»] chr6 (28 HSPs)
chr6 (572-612)||(20858435-20858475)
chr6 (569-608)||(9422833-9422872)
chr6 (569-612)||(22730754-22730797)
chr6 (569-612)||(34524875-34524918)
chr6 (570-612)||(4844144-4844186)
chr6 (570-611)||(8309165-8309206)
chr6 (569-612)||(9031766-9031809)
chr6 (570-612)||(30833018-30833060)
chr6 (574-611)||(17347260-17347297)
chr6 (574-627)||(30905488-30905541)
chr6 (569-612)||(2945595-2945639)
chr6 (569-609)||(31639141-31639181)
chr6 (572-620)||(32394028-32394076)
chr6 (569-612)||(8175996-8176039)
chr6 (569-612)||(10455742-10455785)
chr6 (569-612)||(17305516-17305559)
chr6 (569-612)||(30668236-30668279)
chr6 (572-614)||(1488091-1488133)
chr6 (574-612)||(17176154-17176192)
chr6 (578-612)||(17751389-17751423)
chr6 (569-611)||(19135929-19135971)
chr6 (579-612)||(8253642-8253675)
chr6 (570-631)||(14949053-14949114)
chr6 (569-614)||(33947383-33947428)
chr6 (569-612)||(9064865-9064909)
chr6 (570-614)||(14948834-14948878)
chr6 (569-612)||(14981754-14981798)
chr6 (569-609)||(31411116-31411156)
[»] scaffold0712 (1 HSPs)
scaffold0712 (569-612)||(4520-4563)
[»] scaffold0709 (1 HSPs)
scaffold0709 (569-612)||(4540-4583)
[»] scaffold0168 (1 HSPs)
scaffold0168 (569-612)||(34085-34128)
[»] chr8 (29 HSPs)
chr8 (569-612)||(7345428-7345471)
chr8 (569-614)||(216197-216242)
chr8 (569-614)||(220412-220457)
chr8 (569-614)||(689567-689612)
chr8 (569-614)||(692757-692802)
chr8 (569-614)||(696966-697011)
chr8 (569-614)||(729820-729865)
chr8 (569-614)||(734035-734080)
chr8 (569-614)||(853715-853760)
chr8 (569-614)||(857931-857976)
chr8 (568-612)||(14011090-14011134)
chr8 (568-612)||(26657855-26657899)
chr8 (570-618)||(37989087-37989135)
chr8 (569-612)||(18577113-18577156)
chr8 (569-612)||(39432380-39432423)
chr8 (570-612)||(16808413-16808455)
chr8 (569-612)||(2696532-2696576)
chr8 (569-628)||(10292351-10292411)
chr8 (569-612)||(38790625-38790669)
chr8 (569-612)||(4955035-4955078)
chr8 (569-612)||(29937210-29937253)
chr8 (569-627)||(12986472-12986530)
chr8 (582-612)||(22847314-22847344)
chr8 (569-612)||(2800018-2800062)
chr8 (569-612)||(14012611-14012655)
chr8 (568-612)||(17467277-17467321)
chr8 (569-612)||(21133571-21133615)
chr8 (571-631)||(29653056-29653116)
chr8 (579-627)||(36593204-36593252)
[»] chr3 (36 HSPs)
chr3 (569-612)||(16874242-16874285)
chr3 (569-612)||(24130559-24130602)
chr3 (562-611)||(12143460-12143509)
chr3 (569-610)||(30745785-30745826)
chr3 (569-609)||(3461779-3461819)
chr3 (568-612)||(4010070-4010114)
chr3 (568-612)||(31108812-31108856)
chr3 (569-612)||(3973302-3973345)
chr3 (569-612)||(3996531-3996574)
chr3 (569-612)||(6951842-6951885)
chr3 (569-612)||(19137619-19137662)
chr3 (570-609)||(23305747-23305786)
chr3 (569-612)||(24160580-24160623)
chr3 (571-609)||(33533205-33533243)
chr3 (570-612)||(51017791-51017833)
chr3 (569-610)||(40160735-40160776)
chr3 (568-612)||(3993759-3993803)
chr3 (580-612)||(51412042-51412074)
chr3 (569-612)||(12236599-12236642)
chr3 (569-612)||(28951866-28951909)
chr3 (569-608)||(38507648-38507687)
chr3 (578-612)||(34407142-34407176)
chr3 (569-611)||(41430834-41430876)
chr3 (580-629)||(4045669-4045718)
chr3 (572-609)||(23237365-23237402)
chr3 (572-609)||(24890076-24890113)
chr3 (569-601)||(6284877-6284909)
chr3 (569-612)||(9624982-9625026)
chr3 (569-612)||(14868684-14868728)
chr3 (573-609)||(16999932-16999968)
chr3 (586-614)||(27119293-27119321)
chr3 (569-612)||(27183733-27183777)
chr3 (569-612)||(43774184-43774228)
chr3 (576-608)||(46969005-46969037)
chr3 (569-612)||(47191372-47191416)
chr3 (569-612)||(52030120-52030164)
[»] chr2 (30 HSPs)
chr2 (569-632)||(22355083-22355146)
chr2 (569-628)||(38807881-38807940)
chr2 (569-631)||(25463299-25463361)
chr2 (569-632)||(34107274-34107337)
chr2 (569-612)||(34376542-34376585)
chr2 (569-632)||(39334913-39334976)
chr2 (572-614)||(19064942-19064984)
chr2 (569-614)||(19352866-19352911)
chr2 (579-632)||(44132595-44132648)
chr2 (568-628)||(18065253-18065313)
chr2 (569-609)||(36277757-36277797)
chr2 (575-627)||(40471159-40471211)
chr2 (569-612)||(2057481-2057524)
chr2 (569-612)||(5772860-5772903)
chr2 (569-612)||(14307746-14307789)
chr2 (569-612)||(39118393-39118436)
chr2 (569-611)||(218108-218150)
chr2 (580-614)||(26975348-26975382)
chr2 (570-612)||(36386165-36386207)
chr2 (572-612)||(3037674-3037715)
chr2 (572-609)||(6496442-6496479)
chr2 (568-629)||(11001768-11001829)
chr2 (569-614)||(41288089-41288134)
chr2 (575-628)||(42211526-42211579)
chr2 (569-612)||(11133075-11133119)
chr2 (584-612)||(13294436-13294464)
chr2 (601-629)||(27464138-27464166)
chr2 (569-612)||(29664602-29664646)
chr2 (580-628)||(29713125-29713173)
chr2 (569-609)||(32677335-32677375)
[»] scaffold1808 (1 HSPs)
scaffold1808 (569-614)||(883-928)
[»] scaffold1343 (1 HSPs)
scaffold1343 (572-612)||(929-969)
[»] scaffold0126 (1 HSPs)
scaffold0126 (569-612)||(25013-25056)
[»] scaffold0070 (1 HSPs)
scaffold0070 (568-612)||(12563-12608)
[»] scaffold0809 (1 HSPs)
scaffold0809 (569-612)||(4857-4901)
[»] scaffold0036 (1 HSPs)
scaffold0036 (569-612)||(25025-25069)


Alignment Details
Target: chr5 (Bit Score: 498; Significance: 0; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 23 - 632
Target Start/End: Complemental strand, 28189225 - 28188603
Alignment:
Q  23 aaggggaacatcaaaatttactcataatctcaatcaattaatttttgaagtcaatctcaatcaattactattaatgttgtgccataaggagtaaaattat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28189225 aaggggaacatcaaaatttactcataatctcaatcaattaatttttgaagtcaatctcaatcaattactattaatgttgtgccataaggagtaaaattat 28189126  T
Q  123 tattcttaccaataaaatgttggtggaaataaattagagtagaagagatatggatgattgagagctgacgaggatggtcccacgtgtccaatcaagcaaa 222  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28189125 tattcttaccaataaaatgttggtggaaataaattagagtaga---gatatggatgattgagagctgacgaggatggtcccacgtgtccaatcaagcaaa 28189029  T
Q  223 gatacgctcaagttgacaatcaaaatcattggtgtactggattcatatcatttttgttcatttcacttaccttacttggatcttagtcagcattgatatt 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28189028 gatacgctcaagttgacaatcaaaatcattggtgtactggattcatatcatttttgttcatttcacttaccttacttggatcttagtcagcattgatatt 28188929  T
Q  323 tcatcaatgcattggataaggatgtgccacaagattcatatctcttatttttcataagcaactaattttgatctctataagaattgcaagtatatatgta 422  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  28188928 tcatcaatgctttggataaggatgtggcacaagattcatatctcttctttttcataagcaactaattttgatctctgtcagaattgcaagtatatatgta 28188829  T
Q  423 caaatgtcttgtttatgattacttctttaacattttcatgt--aaataattgtggccaattagtcccttacaaaaaataatatcaaag------------ 508  Q
    |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||                
T  28188828 caaatgtcttgtttatgattacttctttaacattttcatgtaaaaaaaattgtggccaattagtcccttacaaaaaataatatcaaagattacttcttta 28188729  T
Q  509 --attttcatatgaatgataaactagtttctaacacattacaagaacaaacaattaatccatgtgagcataactcagttggcagggacatgcattgttat 606  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||| ||| | ||||||||||||    
T  28188728 acattttcatatgaatgataaactagtttctaacacattacaagaacaaacaactattccatgtgaacataattcagttggtaggaatatgcattgttat 28188629  T
Q  607 atgcagagattgagattcgaactcca 632  Q
    ||| ||||||||||||||||||||||    
T  28188628 atgtagagattgagattcgaactcca 28188603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 570 - 630
Target Start/End: Original strand, 38040267 - 38040327
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactc 630  Q
    |||||||| |||||||||||||||||||||||||||||||||| | | ||| |||||||||    
T  38040267 tgagcatagctcagttggcagggacatgcattgttatatgcaggggtcgaggttcgaactc 38040327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 11246589 - 11246546
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  11246589 gtgagcatagctcagttggcagggacatgcattgttatatgcag 11246546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 25660912 - 25660955
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  25660912 gtgagcatagctcagttggcagggatatgcattgttatatgcag 25660955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 35813337 - 35813294
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| |||||||| |||||||||||||||||||||||||    
T  35813337 gtgagcatagctcagttgacagggacatgcattgttatatgcag 35813294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 41405186 - 41405141
Alignment:
Q  566 catgtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||    
T  41405186 catgtgagcatagttcagttgacagggacatgcattgttatatgca 41405141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 612
Target Start/End: Complemental strand, 42781679 - 42781646
Alignment:
Q  579 ctcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||||||||||||||||||    
T  42781679 ctcagttggcagggacatgcattgttatatgcag 42781646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 6447576 - 6447532
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  6447576 gtgagcataactcagttggcagggacaatgcattattatatgcag 6447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 17557030 - 17557070
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  17557030 gtgagcctaactcagttggcagagacatgcattgttatatg 17557070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 36116977 - 36116929
Alignment:
Q  564 tccatgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||| |||||||||||||| |||||||||||||| |||| |||||||||    
T  36116977 tccaagtgagcataactcaattggcagggacatgtattgctatatgcag 36116929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 608
Target Start/End: Complemental strand, 3536031 - 3535992
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatat 608  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  3536031 gtgagcatagttcagttggcagggacatgcattgttatat 3535992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 574 - 612
Target Start/End: Complemental strand, 9409041 - 9409002
Alignment:
Q  574 cataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  9409041 cataactcagttggcagggacaatgcattgttatatgcag 9409002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 20186866 - 20186909
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||    
T  20186866 gtgagcattgctcagttggcagggacatgcattattatatgcag 20186909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 22867087 - 22867044
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||| || ||||||||||| ||||||||||    
T  22867087 gtgagcataactcagttgacaaggacatgcattattatatgcag 22867044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 36742062 - 36742019
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||    
T  36742062 gtgagcatagctcagttggcagagacatgaattgttatatgcag 36742019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 40250272 - 40250229
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||    
T  40250272 gtgagcatagctcagttggcagtaacatgcattgttatatgcag 40250229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 28537135 - 28537177
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  28537135 gtgagcataactcaattgacatggacatgcattgttatatgca 28537177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 627
Target Start/End: Complemental strand, 31934970 - 31934912
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaa 627  Q
    |||| |||||||||||||| |||   ||||||| |||||||||||||||||| ||||||    
T  31934970 gtgaacataactcagttggtaggacaatgcattattatatgcagagattgaggttcgaa 31934912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 1463869 - 1463914
Alignment:
Q  568 tgtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||    
T  1463869 tgtgagcatagctcagttggcagggacaatgcattattatatgcag 1463914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 629
Target Start/End: Original strand, 9963415 - 9963476
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcagagattgagattcgaact 629  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||| | ||| | ||||||||    
T  9963415 gtgagtatagctcagttggcagggacaatgcattgttatatgcaggggttggggttcgaact 9963476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 612
Target Start/End: Original strand, 29561645 - 29561686
Alignment:
Q  571 gagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||| |||| || ||||||||||||||||||||||||||    
T  29561645 gagcatagctcatttcgcagggacatgcattgttatatgcag 29561686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 6806736 - 6806692
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||    
T  6806736 gtgagcatagctcagttggcagagacaatgcattgttatatgcag 6806692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 608
Target Start/End: Complemental strand, 17178314 - 17178278
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatat 608  Q
    |||||| |||||||| |||||||||||||||||||||    
T  17178314 agcatagctcagttgacagggacatgcattgttatat 17178278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 613
Target Start/End: Complemental strand, 31004225 - 31004181
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcaga 613  Q
    |||||||||||||| |||| |||||||| |||||||||| |||||    
T  31004225 gtgagcataactcaattggtagggacatacattgttataggcaga 31004181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 608
Target Start/End: Complemental strand, 31280638 - 31280602
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatat 608  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  31280638 agcatagctcagttggcagggacatgcattattatat 31280602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 612
Target Start/End: Original strand, 31556821 - 31556861
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||| |||| || ||||||||||||||||||||||||||    
T  31556821 agcatagctcacttagcagggacatgcattgttatatgcag 31556861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 612
Target Start/End: Original strand, 31907662 - 31907694
Alignment:
Q  580 tcagttggcagggacatgcattgttatatgcag 612  Q
    |||||| ||||||||||||||||||||||||||    
T  31907662 tcagtttgcagggacatgcattgttatatgcag 31907694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 612
Target Start/End: Complemental strand, 38040176 - 38040144
Alignment:
Q  580 tcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||| ||||||||||||||||||||||    
T  38040176 tcagttggcaaggacatgcattgttatatgcag 38040144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 3e-16; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 575 - 631
Target Start/End: Original strand, 42432014 - 42432070
Alignment:
Q  575 ataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcc 631  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  42432014 ataactcagttggcagggacatgcattgttatatgcagggattggggttcgaactcc 42432070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 568 - 611
Target Start/End: Complemental strand, 56956 - 56913
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  56956 tgtgagcataactcagttggcagggacatgcattgttatatgca 56913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 36045830 - 36045892
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcc 631  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  36045830 gtgagcatagctcaattgacagggacatgcattgttatatgcaggggttgagattcgaactcc 36045892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 570 - 614
Target Start/End: Original strand, 17431378 - 17431422
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  17431378 tgagcataactcagttgacagggacatgcattgttatatgcagag 17431422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 20610738 - 20610782
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  20610738 tgtgagcatagctcagttggcagggacatgcattgttatatgcag 20610782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 49039540 - 49039497
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  49039540 gtgagcatagctcagttggcagggacatgcattgttatatgcag 49039497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 631
Target Start/End: Original strand, 38657540 - 38657602
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcc 631  Q
    ||||||||  |||||||||||||||||||||||||||||||||| || |||  ||||||||||    
T  38657540 gtgagcatggctcagttggcagggacatgcattgttatatgcagggactgaagttcgaactcc 38657602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 4419781 - 4419738
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  4419781 gtgagcataactcagttgtcagagacatgcattgttatatgcag 4419738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 574 - 609
Target Start/End: Complemental strand, 12585649 - 12585614
Alignment:
Q  574 cataactcagttggcagggacatgcattgttatatg 609  Q
    ||||||||||||||||||||||||||||||||||||    
T  12585649 cataactcagttggcagggacatgcattgttatatg 12585614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 12796666 - 12796709
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  12796666 gtgagcataactcagttggcaggaacatacattgttatatgcag 12796709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 20166316 - 20166359
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  20166316 gtgagcgtagctcagttggcagggacatgcattgttatatgcag 20166359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 41492593 - 41492550
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||    
T  41492593 gtgagcatagctcagttggcagggacatgcattattatatgcag 41492550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 566 - 616
Target Start/End: Complemental strand, 25714551 - 25714501
Alignment:
Q  566 catgtgagcataactcagttggcagggacatgcattgttatatgcagagat 616  Q
    |||||||| |||||| |||||||||| | ||||||||||||||||||||||    
T  25714551 catgtgagtataacttagttggcaggaatatgcattgttatatgcagagat 25714501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 569 - 614
Target Start/End: Original strand, 53621200 - 53621245
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||    
T  53621200 gtgagcataattcagttgacagggacatgcattgttatatacagag 53621245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 1589253 - 1589209
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||| |||||||||| | |||||||||||||||||||||    
T  1589253 tgtgagcatagctcagttggcggtgacatgcattgttatatgcag 1589209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 572 - 612
Target Start/End: Complemental strand, 14504725 - 14504685
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  14504725 agcataactcagttggcaagaacatgcattgttatatgcag 14504685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 36008274 - 36008318
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  36008274 gtgagcatagctcagttggcagggacaatgcattgttatatgcag 36008318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 609
Target Start/End: Complemental strand, 44449562 - 44449522
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  44449562 gtgagcataactcagttagcaggaacatgcattgttatatg 44449522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 48512198 - 48512242
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  48512198 gtgagcatagctcagttggcagggacaatgcattgttatatgcag 48512242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 613
Target Start/End: Original strand, 53335308 - 53335352
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcaga 613  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||    
T  53335308 gtgagcataattcagttggcagcgacatgcatcgttatatgcaga 53335352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 612
Target Start/End: Original strand, 9084759 - 9084802
Alignment:
Q  570 tgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  9084759 tgagcatagctcagttggcagggacaatgcattgttatatgcag 9084802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 608
Target Start/End: Original strand, 15853822 - 15853861
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatat 608  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  15853822 gtgagcataattcagttggcaggaacatgcattgttatat 15853861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 27921896 - 27921939
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||    
T  27921896 gtgagcatagctcagttggtagggacatgcattattatatgcag 27921939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 43050028 - 43049985
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||    
T  43050028 gtgagcatagctcagttgacaggaacatgcattgttatatgcag 43049985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 49319393 - 49319436
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||    
T  49319393 gtgagcatagctcagttggcatggacatgcattattatatgcag 49319436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 54854274 - 54854231
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||    
T  54854274 gtgagcatagctcagttggcagggacatgcataattatatgcag 54854231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 578 - 612
Target Start/End: Complemental strand, 37997932 - 37997898
Alignment:
Q  578 actcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||| |||||||||||||||    
T  37997932 actcagttggcagggacattcattgttatatgcag 37997898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 613
Target Start/End: Complemental strand, 8241465 - 8241424
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcaga 613  Q
    ||||||||||||||| |||| ||||||||| |||||||||||    
T  8241465 agcataactcagttgtcaggaacatgcattattatatgcaga 8241424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 613
Target Start/End: Original strand, 30152127 - 30152172
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcaga 613  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||    
T  30152127 gtgagcatagctcagttggcaggaacaatgcattgttatatgcaga 30152172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 612
Target Start/End: Complemental strand, 42758260 - 42758215
Alignment:
Q  567 atgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||| ||||||| | ||||||||||||| ||||||||||    
T  42758260 atgtgagcatagctcagtttgtagggacatgcattattatatgcag 42758215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 56531333 - 56531288
Alignment:
Q  568 tgtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||    
T  56531333 tgtgagcatagctcagttggcaaggacaatgcattgttatatgcag 56531288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 2565260 - 2565304
Alignment:
Q  569 gtgagcataactcagttggcagggaca-tgcattgttatatgcag 612  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||    
T  2565260 gtgagcatagctcagttgacagggacaatgcattgttatatgcag 2565304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 12820501 - 12820457
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||    
T  12820501 gtgagcatagctcagttggcagagacaatgcattgttatatgcag 12820457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 20925093 - 20925132
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  20925093 gtgagcataactcagttg-cagggacatggattgttatatg 20925132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 28520827 - 28520783
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  28520827 gtgagcatagctcagttggcagggacaatgcattattatatgcag 28520783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 611
Target Start/End: Original strand, 30565364 - 30565396
Alignment:
Q  579 ctcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||||||||||||| |||||||||||||    
T  30565364 ctcagttggcagggacatgtattgttatatgca 30565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 39449400 - 39449440
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||| |||||||||| ||||||||||||||||| |||||||    
T  39449400 gtgaacataactcagctggcagggacatgcattattatatg 39449440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 53815695 - 53815739
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  53815695 gtgagcatagctcagttggcagggacaatgcattattatatgcag 53815739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 18179328 - 18179371
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18179328 gtgagcataactcagttggcagggacatgcattgttatatgcag 18179371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 9768904 - 9768861
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  9768904 gtgagcatagctcagttggcagggacatgcattgttatatgcag 9768861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 18003816 - 18003859
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  18003816 gtgagcatagctcagttggcagggacatgcattgttatatgcag 18003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 614
Target Start/End: Complemental strand, 28417372 - 28417328
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||    
T  28417372 tgagcataactcagttggcagagacatgcattcttatatgcagag 28417328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 612
Target Start/End: Complemental strand, 47141898 - 47141858
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  47141898 agcataactcagttgacagggacatgcattgttatatgcag 47141858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 614
Target Start/End: Complemental strand, 47645890 - 47645846
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  47645890 tgagcatagctcagttggcagagacatgcattgttatatgcagag 47645846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 575 - 614
Target Start/End: Complemental strand, 2903116 - 2903077
Alignment:
Q  575 ataactcagttggcagggacatgcattgttatatgcagag 614  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  2903116 ataactcagttgccagggacatgcattgttatatgcagag 2903077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 42908771 - 42908814
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  42908771 gtgagcttagctcagttggcagggacatgcattgttatatgcag 42908814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 43327010 - 43327053
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||    
T  43327010 gtgagcataactcagtttgcagggacatgtattgttatatgcag 43327053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 52961177 - 52961134
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  52961177 gtgagcatagctcagttggcaaggacatgcattgttatatgcag 52961134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 1580829 - 1580871
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  1580829 gtgagcataactcagttggcagggacatacaatgttatatgca 1580871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 612
Target Start/End: Complemental strand, 4605936 - 4605894
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  4605936 tgagcataactcagttgacagagacatgcattgttatatgcag 4605894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 7015782 - 7015720
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcc 631  Q
    ||||||||| |||||||||| |||||||||||||||||||| || |  |||| ||||||||||    
T  7015782 gtgagcatagctcagttggctgggacatgcattgttatatgtaggggctgaggttcgaactcc 7015720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 628
Target Start/End: Complemental strand, 9769674 - 9769616
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    |||||||| ||||||||||||||||||||||| ||||||| || ||||| | |||||||    
T  9769674 tgagcatagctcagttggcagggacatgcattattatatgtagggattggggttcgaac 9769616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 9931087 - 9931129
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  9931087 gtgagcataactcagttagcagggacatgcattattatatgca 9931129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 569 - 614
Target Start/End: Original strand, 5862128 - 5862173
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||    
T  5862128 gtgaacatagctcagttggcagggacatgcattgttatatgtagag 5862173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 569 - 618
Target Start/End: Original strand, 9004346 - 9004395
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattg 618  Q
    ||||||||| ||||||||||||||||||  |||||||||||||| |||||    
T  9004346 gtgagcatagctcagttggcagggacatatattgttatatgcagggattg 9004395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 1721139 - 1721183
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||    
T  1721139 tgtgagcatagctcagttggtaggaacatgcattgttatatgcag 1721183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 9527425 - 9527469
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  9527425 gtgagcatagctcagttggcagggacaatgcattgttatatgcag 9527469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 572 - 612
Target Start/End: Original strand, 18646691 - 18646731
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  18646691 agcataactcagttggcatggacatgcattgtgatatgcag 18646731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 612
Target Start/End: Complemental strand, 50199564 - 50199528
Alignment:
Q  576 taactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||| ||||||||||||||||||||||||    
T  50199564 taactcagttggtagggacatgcattgttatatgcag 50199528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 573 - 612
Target Start/End: Complemental strand, 3341827 - 3341788
Alignment:
Q  573 gcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  3341827 gcatagctcagttggcagggacatgcattattatatgcag 3341788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 7906421 - 7906378
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||  |||||||| ||||||||||||||||||||||||    
T  7906421 gtgagcatagttcagttggtagggacatgcattgttatatgcag 7906378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 628
Target Start/End: Complemental strand, 9410422 - 9410364
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    |||||||||  |||||||||| |||||||||| ||||||||||| | |||||||||||||    
T  9410422 gtgagcatagttcagttggcaaggacatgcatagttatatgcag-ggttgagattcgaac 9410364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 37262200 - 37262157
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||  ||||||||||||||||||| |||||||||||||    
T  37262200 gtgagcatagttcagttggcagggacatgcgttgttatatgcag 37262157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 628
Target Start/End: Original strand, 42801879 - 42801938
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    |||| |||| |||||||| ||| ||||||||||||||||||||||| ||| | |||||||    
T  42801879 gtgaacatagctcagttgacagagacatgcattgttatatgcagaggttggggttcgaac 42801938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 43020611 - 43020654
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||    
T  43020611 gtgagcatagctcggttggcagggacatgcattattatatgcag 43020654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 46670939 - 46670896
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||| |||||| |||| |||||||||||||||||||||    
T  46670939 gtgagcataattcagttagcagtgacatgcattgttatatgcag 46670896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 612
Target Start/End: Original strand, 5684115 - 5684165
Alignment:
Q  562 aatccatgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||| ||| |||||| |||||||||||| |||||||||| ||||||||||    
T  5684115 aatccctgtaagcatagctcagttggcagagacatgcattattatatgcag 5684165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 612
Target Start/End: Complemental strand, 33176197 - 33176155
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||    
T  33176197 tgagcatagctcagttggtagggatatgcattgttatatgcag 33176155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 612
Target Start/End: Complemental strand, 47939292 - 47939250
Alignment:
Q  571 gagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  47939292 gagcatagctcagttggcagggacaatgcattgttatatgcag 47939250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 609
Target Start/End: Complemental strand, 3553377 - 3553336
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||||  ||||||||||||||||||| |||||||    
T  3553377 tgtgagcataacttggttggcagggacatgcattattatatg 3553336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 609
Target Start/End: Original strand, 3569055 - 3569084
Alignment:
Q  580 tcagttggcagggacatgcattgttatatg 609  Q
    ||||||||||||||||||||||||||||||    
T  3569055 tcagttggcagggacatgcattgttatatg 3569084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 13870178 - 13870133
Alignment:
Q  568 tgtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||    
T  13870178 tgtgagcatagctcagttggcagggacaatgcattattatatgcag 13870133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 629
Target Start/End: Original strand, 13941330 - 13941379
Alignment:
Q  580 tcagttggcagggacatgcattgttatatgcagagattgagattcgaact 629  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||||||||    
T  13941330 tcagttggcaaggacatgcattgttatatgcagggttcgaggttcgaact 13941379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 195043 - 195087
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||| || ||||||||||||||||||||||  ||||||||||    
T  195043 tgtgagcgtagctcagttggcagggacatgcataattatatgcag 195087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 3140358 - 3140398
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    ||||| |||||||||||| ||| ||||||||||||||||||    
T  3140358 gtgagtataactcagttgacagagacatgcattgttatatg 3140398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 29491469 - 29491513
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  29491469 gtgagcatagctcagttggcagggacaatgcattattatatgcag 29491513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 33694542 - 33694582
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||| |||||||||||| ||||||| |||||||    
T  33694542 gtgagcataacttagttggcagggatatgcattattatatg 33694582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 39238715 - 39238759
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  39238715 gtgagcatagctcagttggcagggacaatgcattattatatgcag 39238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 40678822 - 40678866
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  40678822 gtgagcatagctcagttggcagggacaatgcattattatatgcag 40678866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 47763481 - 47763437
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  47763481 gtgagcatagctcagttggcagggacaatgcattattatatgcag 47763437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 49632293 - 49632333
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||| || |||| ||||||||||||||||||||||||||    
T  49632293 gtgagcgtagctcaattggcagggacatgcattgttatatg 49632333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 611
Target Start/End: Original strand, 50575911 - 50575943
Alignment:
Q  579 ctcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||| |||||||||||||||||||||||    
T  50575911 ctcagttggaagggacatgcattgttatatgca 50575943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 613
Target Start/End: Complemental strand, 51917597 - 51917553
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcaga 613  Q
    ||||||||| |||||||||||  |||||||||| |||||||||||    
T  51917597 gtgagcatagctcagttggcatagacatgcattattatatgcaga 51917553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 52833202 - 52833158
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||    
T  52833202 gtgagcctaactcagttggcagggacaatgcattattatatgcag 52833158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 568 - 628
Target Start/End: Original strand, 1513486 - 1513546
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    ||||||||||| |||||||||||||||||||||||||||||| || | ||||| |||||||    
T  1513486 tgtgagcataaatcagttggcagggacatgcattgttatatgtaggggttgaggttcgaac 1513546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 611
Target Start/End: Complemental strand, 17305485 - 17305443
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  17305485 gtgagcatagctcagttggcagggacatgcattgttatatgca 17305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 612
Target Start/End: Original strand, 35498401 - 35498441
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  35498401 agcataactcagttggcagggacatgcattattatatgcag 35498441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 8766906 - 8766863
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||||| |||||| ||||||||    
T  8766906 gtgagcataactcagttggcagggacattcattgtcatatgcag 8766863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 612
Target Start/End: Original strand, 24427367 - 24427406
Alignment:
Q  573 gcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  24427367 gcataactcagttggcagagacatgcattgttatatgcag 24427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 608
Target Start/End: Complemental strand, 38032950 - 38032911
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatat 608  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  38032950 gtgaacataactcagttggcagggacatgcattgttatat 38032911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 43209401 - 43209444
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  43209401 gtgaacataactcagttggcaggaacatgcattgttatatgcag 43209444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 43635588 - 43635631
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  43635588 gtgagcataactcagttggcagaaacatgcattgttatatgcag 43635631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 628
Target Start/End: Complemental strand, 45198193 - 45198134
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    ||||||||||||||||||| |||   ||||||| |||||||||| |||||||||||||||    
T  45198193 gtgagcataactcagttggtaggataatgcattattatatgcagtgattgagattcgaac 45198134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 569 - 611
Target Start/End: Complemental strand, 8147281 - 8147239
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  8147281 gtgagcatagctcaattggcagggacatgcattgttatatgca 8147239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 612
Target Start/End: Complemental strand, 32534679 - 32534637
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  32534679 tgagcataactcagttggcagggacatacatggttatatgcag 32534637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 608
Target Start/End: Complemental strand, 43712407 - 43712369
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatat 608  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  43712407 tgagcataactcagttggtagggacatgcattgttatat 43712369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 44409201 - 44409243
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  44409201 gtgagcataactcagttagcagggacatgcattattatatgca 44409243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 7392401 - 7392356
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||    
T  7392401 gtgagcatagctcaattggcaggaacatgcattgttatatgcagag 7392356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 575 - 612
Target Start/End: Original strand, 23799306 - 23799343
Alignment:
Q  575 ataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||| |||||||||||||||||||||    
T  23799306 ataactcagttggcagagacatgcattgttatatgcag 23799343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 609
Target Start/End: Complemental strand, 3246581 - 3246541
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  3246581 gtgagcatagctcagttgacagggacatgcattgttatatg 3246541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 605
Target Start/End: Complemental strand, 14772430 - 14772394
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgtta 605  Q
    |||||||||||||||||||||| ||||||||||||||    
T  14772430 gtgagcataactcagttggcagagacatgcattgtta 14772394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 605
Target Start/End: Complemental strand, 15222882 - 15222846
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgtta 605  Q
    |||||||||||||||||||||| ||||||||||||||    
T  15222882 gtgagcataactcagttggcagagacatgcattgtta 15222846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 21285449 - 21285405
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  21285449 gtgagcatagctcagttggcagggacaatgcattgttatatgcag 21285405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 572 - 612
Target Start/End: Original strand, 35195846 - 35195886
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  35195846 agcatagctcagttggcagggacatgcattattatatgcag 35195886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 576 - 615
Target Start/End: Original strand, 2639626 - 2639665
Alignment:
Q  576 taactcagttggcagggacatgcattgttatatgcagaga 615  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  2639626 taactcagtttgcaaggacatgcattgttatatgcagaga 2639665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 7465466 - 7465509
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||    
T  7465466 gtgagcatagctcagttggcagagacatgcattattatatgcag 7465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 32814827 - 32814870
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||    
T  32814827 gtgagcatagctcagttggtagggacatgcattattatatgcag 32814870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 37410576 - 37410533
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||    
T  37410576 gtgagcatagctcagttggtaaggacatgcattgttatatgcag 37410533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 574 - 612
Target Start/End: Complemental strand, 10020559 - 10020521
Alignment:
Q  574 cataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  10020559 catagctcagttgacagggacatgcattgttatatgcag 10020521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 613
Target Start/End: Original strand, 19924777 - 19924811
Alignment:
Q  579 ctcagttggcagggacatgcattgttatatgcaga 613  Q
    ||||||||||||||||||||||| |||||||||||    
T  19924777 ctcagttggcagggacatgcattattatatgcaga 19924811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 20527526 - 20527481
Alignment:
Q  568 tgtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||    
T  20527526 tgtgagtatagctcagttggcagggacaatgcattgttatatgcag 20527481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 583 - 612
Target Start/End: Complemental strand, 32309229 - 32309200
Alignment:
Q  583 gttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||||||||||||||    
T  32309229 gttggcagggacatgcattgttatatgcag 32309200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 38451861 - 38451906
Alignment:
Q  568 tgtgagcataactcagttggcagggaca-tgcattgttatatgcag 612  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||    
T  38451861 tgtgagcatagctcagttgacagggacaatgcattgttatatgcag 38451906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 609
Target Start/End: Complemental strand, 41012677 - 41012636
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||| |||| |||| |||||||||||||||||||||    
T  41012677 tgtgagcatagctcaattggtagggacatgcattgttatatg 41012636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 14818461 - 14818417
Alignment:
Q  569 gtgagcataactcagttggcagggaca-tgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  14818461 gtgagcatagctcagttggcagggacagtgcattattatatgcag 14818417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 15265459 - 15265415
Alignment:
Q  569 gtgagcataactcagttggcagggaca-tgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  15265459 gtgagcatagctcagttggcagggacagtgcattattatatgcag 15265415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 31475936 - 31475892
Alignment:
Q  569 gtgagcataactcagttggcagggaca-tgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  31475936 gtgagcatagctcagttggcagggacattgcattattatatgcag 31475892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 41139086 - 41139130
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  41139086 gtgagcatagctcagttggcagggacaatgcattattatatgcag 41139130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 572 - 612
Target Start/End: Complemental strand, 20858475 - 20858435
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20858475 agcataactcagttggcagggacatgcattgttatatgcag 20858435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Original strand, 9422833 - 9422872
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatat 608  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9422833 gtgagcataactcagttggcagggacatgcattgttatat 9422872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 22730797 - 22730754
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  22730797 gtgagcataactcagttggcagagacatgcattgttatatgcag 22730754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 34524875 - 34524918
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  34524875 gtgagcatagctcagttggcagggacatgcattgttatatgcag 34524918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 570 - 612
Target Start/End: Original strand, 4844144 - 4844186
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  4844144 tgagtataactcagttggcagggacatgcattgttatatgcag 4844186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 570 - 611
Target Start/End: Original strand, 8309165 - 8309206
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  8309165 tgagcatagctcagttggcagggacatgcattgttatatgca 8309206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 9031766 - 9031809
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  9031766 gtgaacatagctcagttggcagggacatgcattgttatatgcag 9031809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 612
Target Start/End: Original strand, 30833018 - 30833060
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  30833018 tgagcatagttcagttggcagggacatgcattgttatatgcag 30833060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 574 - 611
Target Start/End: Original strand, 17347260 - 17347297
Alignment:
Q  574 cataactcagttggcagggacatgcattgttatatgca 611  Q
    |||||||||||||||||||| |||||||||||||||||    
T  17347260 cataactcagttggcagggatatgcattgttatatgca 17347297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 574 - 627
Target Start/End: Original strand, 30905488 - 30905541
Alignment:
Q  574 cataactcagttggcagggacatgcattgttatatgcagagattgagattcgaa 627  Q
    |||||||||||||| ||| ||||||||||||||||| || ||||||| ||||||    
T  30905488 cataactcagttggtaggaacatgcattgttatatgtagggattgaggttcgaa 30905541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 2945595 - 2945639
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  2945595 gtgagcatagctcagttggcagggacaatgcattgttatatgcag 2945639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 31639141 - 31639181
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  31639141 gtgagcataactcagttgacagggacacgcattgttatatg 31639181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 572 - 620
Target Start/End: Original strand, 32394028 - 32394076
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcagagattgag 620  Q
    |||||||||||||||||||||||||| |||||  ||||||||| |||||    
T  32394028 agcataactcagttggcagggacatgtattgtcttatgcagaggttgag 32394076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 8175996 - 8176039
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||    
T  8175996 gtgagcatagctcagttgacagagacatgcattgttatatgcag 8176039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 10455742 - 10455785
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||  |||||||||||| ||||||||||||||||||||    
T  10455742 gtgagcatagttcagttggcaggaacatgcattgttatatgcag 10455785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 17305516 - 17305559
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||    
T  17305516 gtgaacataactcagttggtagggacatgcattattatatgcag 17305559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 30668279 - 30668236
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||  |||||||||| ||||||||||    
T  30668279 gtgagcataactcagttggcatagacatgcattattatatgcag 30668236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 572 - 614
Target Start/End: Original strand, 1488091 - 1488133
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    |||||| |||| ||||||| |||||||||||||||||||||||    
T  1488091 agcatatctcaattggcagagacatgcattgttatatgcagag 1488133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 574 - 612
Target Start/End: Original strand, 17176154 - 17176192
Alignment:
Q  574 cataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  17176154 catagctcagttgacagggacatgcattgttatatgcag 17176192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 578 - 612
Target Start/End: Complemental strand, 17751423 - 17751389
Alignment:
Q  578 actcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||| ||||||||||||||||||||||    
T  17751423 actcagttggcatggacatgcattgttatatgcag 17751389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 19135929 - 19135971
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||    
T  19135929 gtgagcatagctcggttggcagggacatgcattattatatgca 19135971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 612
Target Start/End: Complemental strand, 8253675 - 8253642
Alignment:
Q  579 ctcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||| ||||||||||||||||||||||    
T  8253675 ctcagttggcatggacatgcattgttatatgcag 8253642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 570 - 631
Target Start/End: Complemental strand, 14949114 - 14949053
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcc 631  Q
    |||||||||||||||||||||  |||| |||| |||||||||||| | | | ||||||||||    
T  14949114 tgagcataactcagttggcagaaacatacattattatatgcagaggtcggggttcgaactcc 14949053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 614
Target Start/End: Original strand, 33947383 - 33947428
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| ||||||||| | ||||||||||||||| ||||||||    
T  33947383 gtgagcatatctcagttggtatggacatgcattgttacatgcagag 33947428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 9064865 - 9064909
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  9064865 gtgagcatagctcagttggcagggacaatgcattattatatgcag 9064909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 570 - 614
Target Start/End: Complemental strand, 14948878 - 14948834
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    |||||||| |||||||| ||||||||| |||| ||||||||||||    
T  14948878 tgagcatagctcagttgacagggacatacattattatatgcagag 14948834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 14981798 - 14981754
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  14981798 gtgagcatagctcagttggcagggacaatgcattattatatgcag 14981754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Complemental strand, 31411156 - 31411116
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||||||||| |||| ||||||||| |||||||    
T  31411156 gtgagcataactcagttgacaggaacatgcattattatatg 31411116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 4520 - 4563
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  4520 gtgagcatagctcagttggcagggacatgcattgttatatgcag 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 4540 - 4583
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  4540 gtgagcatagctcagttggcagggacatgcattgttatatgcag 4583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 34128 - 34085
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  34128 gtgagcatagctcagttggcagggacatgcattgttatatgcag 34085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 7345428 - 7345471
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  7345428 gtgagcataactcagttggcagggacatgcattattatatgcag 7345471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 216242 - 216197
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  216242 gtgagcatagctcagttggcagggacatacattgttatatgcagag 216197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 220457 - 220412
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  220457 gtgagcatagctcagttggcagggacatgcaatgttatatgcagag 220412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 689612 - 689567
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  689612 gtgagcatagctcagttggcagggacatgcaatgttatatgcagag 689567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 692802 - 692757
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  692802 gtgagcatagctcagttggcagggacatacattgttatatgcagag 692757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 697011 - 696966
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  697011 gtgagcatagctcagttggcagggacatacattgttatatgcagag 696966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 729865 - 729820
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  729865 gtgagcatagctcagttggcagggacatacattgttatatgcagag 729820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 734080 - 734035
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  734080 gtgagcatagctcagttggcagggacatgcaatgttatatgcagag 734035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 853760 - 853715
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  853760 gtgagcatagctcagttggcagggacatacattgttatatgcagag 853715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 857976 - 857931
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  857976 gtgagcatagctcagttggcagggacatgcaatgttatatgcagag 857931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 14011134 - 14011090
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  14011134 tgtgagcatagttcagttggcagggacatgcattgttatatgcag 14011090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 26657855 - 26657899
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||    
T  26657855 tgtgagcatagctcagttggtagggacatgcattgttatatgcag 26657899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 618
Target Start/End: Complemental strand, 37989135 - 37989087
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcagagattg 618  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  37989135 tgagcataactcagttaacagggacatgcattgttataggcagagattg 37989087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 18577113 - 18577156
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||| |||||||||| ||||||||||||||    
T  18577113 gtgagcataactcagttgacagggacatgtattgttatatgcag 18577156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 39432423 - 39432380
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  39432423 gtgagcatagctcagttggcagggacatgcaatgttatatgcag 39432380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 612
Target Start/End: Complemental strand, 16808455 - 16808413
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  16808455 tgagcataactcagttagcagggacatgcattattatatgcag 16808413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 2696532 - 2696576
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  2696532 gtgagcataactcagttggcagggacaatgcattattatatgcag 2696576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 628
Target Start/End: Original strand, 10292351 - 10292411
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcagagattgagattcgaac 628  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||| |  ||||||||||||    
T  10292351 gtgagcatagctcagttggcagggacaatgcattattatatgcaggggctgagattcgaac 10292411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 38790669 - 38790625
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  38790669 gtgagcataactcagttggcagggacaatgcattattatatgcag 38790625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 4955078 - 4955035
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||    
T  4955078 gtgagcataactcaattggcagagacatgtattgttatatgcag 4955035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 29937210 - 29937253
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  29937210 gtgagcatagctcagttggtagggacatgtattgttatatgcag 29937253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 627
Target Start/End: Original strand, 12986472 - 12986530
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaa 627  Q
    ||||||||| ||||||||||||| | |||| |||||||||| |||| ||| ||||||||    
T  12986472 gtgagcatatctcagttggcaggtaaatgcgttgttatatgtagaggttgtgattcgaa 12986530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 612
Target Start/End: Complemental strand, 22847344 - 22847314
Alignment:
Q  582 agttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||||||||    
T  22847344 agttggcagggacatgcattgttatatgcag 22847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 2800018 - 2800062
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  2800018 gtgagcatagctcagttggcagggacaatgcattattatatgcag 2800062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 14012611 - 14012655
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||    
T  14012611 gtgagcatagttcagttggcagggacaatgcattgttatatgcag 14012655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 17467277 - 17467321
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||| ||||| || |||| ||||||||||    
T  17467277 tgtgagcataactcagttggtagggatatacattattatatgcag 17467321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 21133615 - 21133571
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||    
T  21133615 gtgagcataactcagttggcaggaacaatgcattattatatgcag 21133571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 631
Target Start/End: Original strand, 29653056 - 29653116
Alignment:
Q  571 gagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcc 631  Q
    |||||||  ||| |||||||||||||||||| |||||||||| ||| | | ||||||||||    
T  29653056 gagcatagttcaattggcagggacatgcattattatatgcagggatcgtggttcgaactcc 29653116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 627
Target Start/End: Original strand, 36593204 - 36593252
Alignment:
Q  579 ctcagttggcagggacatgcattgttatatgcagagattgagattcgaa 627  Q
    ||||||||| |||||||||||||||||||| ||||| ||| | ||||||    
T  36593204 ctcagttggtagggacatgcattgttatatacagaggttggggttcgaa 36593252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 16874285 - 16874242
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  16874285 gtgagcatagctcagttggcagggacatgcattgttatatgcag 16874242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 24130559 - 24130602
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  24130559 gtgagcataactcagttggcagggacatacattgttatatgcag 24130602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 611
Target Start/End: Complemental strand, 12143509 - 12143460
Alignment:
Q  562 aatccatgtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  12143509 aatccttgtgaacatagctcagttggcagggacatgcattgttatatgca 12143460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 610
Target Start/End: Complemental strand, 30745826 - 30745785
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgc 610  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  30745826 gtgagcatagctcagttggcagggacatgcattgttatatgc 30745785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 609
Target Start/End: Complemental strand, 3461819 - 3461779
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  3461819 gtgagcataactcagttgacagggacatgcattgttatatg 3461779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 4010114 - 4010070
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||    
T  4010114 tgtgagcatagctcagttggtagggacatgcattgttatatgcag 4010070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 31108856 - 31108812
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  31108856 tgtgagcataactcagttggcagggacatgcataattatatgcag 31108812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 3973302 - 3973345
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  3973302 gtgagcatagctcagttggtagggacatgcattgttatatgcag 3973345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 3996574 - 3996531
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  3996574 gtgagcatagctcagttggtagggacatgcattgttatatgcag 3996531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 6951885 - 6951842
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  6951885 gtgagcataactcagttgacagggacatgcattattatatgcag 6951842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 19137619 - 19137662
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  19137619 gtgagcatagctcagttggcaggaacatgcattgttatatgcag 19137662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 23305747 - 23305786
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23305747 tgagcataactcagttggtagggacatgcattgttatatg 23305786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 24160623 - 24160580
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  24160623 gtgagcataactcagttggcagagacatgcactgttatatgcag 24160580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 609
Target Start/End: Original strand, 33533205 - 33533243
Alignment:
Q  571 gagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  33533205 gagcataactcagttggcagagacatgcattgttatatg 33533243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 612
Target Start/End: Original strand, 51017791 - 51017833
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||| ||| ||||||||||||||||||||||||||||||||||    
T  51017791 tgagtatagctcagttggcagggacatgcattgttatatgcag 51017833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 569 - 610
Target Start/End: Original strand, 40160735 - 40160776
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgc 610  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  40160735 gtgagcatagctcaattggcagggacatgcattgttatatgc 40160776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 3993803 - 3993759
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||    
T  3993803 tgtgagcatagctcagttgagagggacatgcattgttatatgcag 3993759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 612
Target Start/End: Complemental strand, 51412074 - 51412042
Alignment:
Q  580 tcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||||||||||    
T  51412074 tcagttggcagggacatgcattgttatatgcag 51412042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 12236599 - 12236642
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||| || ||||||||||||||||||||||| ||||||||||    
T  12236599 gtgagcgtagctcagttggcagggacatgcattattatatgcag 12236642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 28951866 - 28951909
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||    
T  28951866 gtgagcataactcagttggcagatacatgcattattatatgcag 28951909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 608
Target Start/End: Original strand, 38507648 - 38507687
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatat 608  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  38507648 gtgagcatagctcagttggcagggacatgcattattatat 38507687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 578 - 612
Target Start/End: Complemental strand, 34407176 - 34407142
Alignment:
Q  578 actcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||| ||||||||||    
T  34407176 actcagttggcagggacatgcattattatatgcag 34407142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Complemental strand, 41430876 - 41430834
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||    
T  41430876 gtgagcataactcagttggtagggatatgcattattatatgca 41430834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 629
Target Start/End: Complemental strand, 4045718 - 4045669
Alignment:
Q  580 tcagttggcagggacatgcattgttatatgcagagattgagattcgaact 629  Q
    ||||||| ||||||||||||||||||||||||| | | ||| ||||||||    
T  4045718 tcagttgacagggacatgcattgttatatgcaggggtcgaggttcgaact 4045669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 609
Target Start/End: Original strand, 23237365 - 23237402
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  23237365 agcatagctcagttggcagggacatgcattattatatg 23237402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 609
Target Start/End: Original strand, 24890076 - 24890113
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatg 609  Q
    ||||||||||||||| || |||||||||||||||||||    
T  24890076 agcataactcagttgacaaggacatgcattgttatatg 24890113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 601
Target Start/End: Original strand, 6284877 - 6284909
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcatt 601  Q
    |||||||||| ||||||||||||||||||||||    
T  6284877 gtgagcataattcagttggcagggacatgcatt 6284909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 9624982 - 9625026
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  9624982 gtgagcatagctcagttggcagggacaatgcattattatatgcag 9625026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 14868684 - 14868728
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  14868684 gtgagcatagctcagttggcagggacaatgcattattatatgcag 14868728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 609
Target Start/End: Original strand, 16999932 - 16999968
Alignment:
Q  573 gcataactcagttggcagggacatgcattgttatatg 609  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  16999932 gcataactctgttggcagggacatgcattattatatg 16999968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 586 - 614
Target Start/End: Original strand, 27119293 - 27119321
Alignment:
Q  586 ggcagggacatgcattgttatatgcagag 614  Q
    |||||||||||||||||||||||||||||    
T  27119293 ggcagggacatgcattgttatatgcagag 27119321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 27183777 - 27183733
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  27183777 gtgagcatagctcagttggcagggacaatgcattattatatgcag 27183733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 43774184 - 43774228
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||    
T  43774184 gtgagtatagctcagttggcagggacaatgcattgttatatgcag 43774228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 576 - 608
Target Start/End: Original strand, 46969005 - 46969037
Alignment:
Q  576 taactcagttggcagggacatgcattgttatat 608  Q
    ||||||||||||||| |||||||||||||||||    
T  46969005 taactcagttggcagagacatgcattgttatat 46969037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 47191372 - 47191416
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  47191372 gtgagcatagctcagttggcagggacaatgcattattatatgcag 47191416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 52030120 - 52030164
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||    
T  52030120 gtgagcataactcagttggcagggacaatgtattattatatgcag 52030164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 632
Target Start/End: Original strand, 22355083 - 22355146
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcca 632  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||| | ||||| |||||||||||    
T  22355083 gtgagcatagctcagttggcaaggacatgcattgttatgtgcaggggttgagtttcgaactcca 22355146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 569 - 628
Target Start/End: Original strand, 38807881 - 38807940
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    ||||| ||||||||||||||||||||||||||  |||||||||| || ||||||||||||    
T  38807881 gtgagtataactcagttggcagggacatgcataattatatgcagggaatgagattcgaac 38807940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 631
Target Start/End: Complemental strand, 25463361 - 25463299
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcc 631  Q
    ||||||||||| || ||||||||||||| ||||||||||| ||| ||||||| ||||||||||    
T  25463361 gtgagcataacccaattggcagggacattcattgttatatacagggattgaggttcgaactcc 25463299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 632
Target Start/End: Original strand, 34107274 - 34107337
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcca 632  Q
    ||||||||| ||||||||||||||||||| ||  |||||||||| | ||||| |||||||||||    
T  34107274 gtgagcatagctcagttggcagggacatgtataattatatgcaggggttgaggttcgaactcca 34107337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 34376542 - 34376585
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  34376542 gtgagtataattcagttggcagggacatgcattgttatatgcag 34376585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 569 - 632
Target Start/End: Complemental strand, 39334976 - 39334913
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaactcca 632  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |  || | |||||||||||    
T  39334976 gtgagcataactcagttggcagggacatgcattattatatacaggggctggggttcgaactcca 39334913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 614
Target Start/End: Complemental strand, 19064984 - 19064942
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  19064984 agcataactcatttggcagggacatgcattgttatatgtagag 19064942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 569 - 614
Target Start/End: Original strand, 19352866 - 19352911
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||    
T  19352866 gtgaacataactcagttgacagagacatgcattgttatatgcagag 19352911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 632
Target Start/End: Complemental strand, 44132648 - 44132595
Alignment:
Q  579 ctcagttggcagggacatgcattgttatatgcagagattgagattcgaactcca 632  Q
    |||||||||||| ||||||||||||||||||||||| | | | |||||||||||    
T  44132648 ctcagttggcagagacatgcattgttatatgcagaggtcggggttcgaactcca 44132595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 628
Target Start/End: Original strand, 18065253 - 18065313
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    |||||||||| ||||||||| || | ||||||||||||||||||| | ||||| |||||||    
T  18065253 tgtgagcatagctcagttggtagaggcatgcattgttatatgcaggggttgaggttcgaac 18065313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 609
Target Start/End: Complemental strand, 36277797 - 36277757
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  36277797 gtgagcatagctcagttggcagtgacatgcattgttatatg 36277757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 627
Target Start/End: Original strand, 40471159 - 40471211
Alignment:
Q  575 ataactcagttggcagggacatgcattgttatatgcagagattgagattcgaa 627  Q
    |||||||||||| |||||||||||||| |||||||||| | ||| ||||||||    
T  40471159 ataactcagttgacagggacatgcattattatatgcaggggttgggattcgaa 40471211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 2057481 - 2057524
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||||||| || |||||||||||||||    
T  2057481 gtgagcatagctcagttggcagggatatacattgttatatgcag 2057524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 5772860 - 5772903
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  5772860 gtgagcatagctcagttggcaaggacatgtattgttatatgcag 5772903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 14307789 - 14307746
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||    
T  14307789 gtgagcatggctcagttggtagggacatgcattgttatatgcag 14307746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 39118393 - 39118436
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||| |||||||||||| |||||||| |||||||||||||||    
T  39118393 gtgagcgtaactcagttggtagggacatacattgttatatgcag 39118436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 218108 - 218150
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgca 611  Q
    |||||||||| | | ||||||||||||||||||||||||||||    
T  218108 gtgagcataatttatttggcagggacatgcattgttatatgca 218150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 580 - 614
Target Start/End: Complemental strand, 26975382 - 26975348
Alignment:
Q  580 tcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||||||||||||||||||||| |||||||||||    
T  26975382 tcagttggcagggacatgcattgctatatgcagag 26975348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 612
Target Start/End: Complemental strand, 36386207 - 36386165
Alignment:
Q  570 tgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||    
T  36386207 tgagcatagctcagttggtagggatatgcattgttatatgcag 36386165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 612
Target Start/End: Complemental strand, 3037715 - 3037674
Alignment:
Q  572 agcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  3037715 agcataactcagttggctgggacaatgcattgttatatgcag 3037674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 572 - 609
Target Start/End: Original strand, 6496442 - 6496479
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  6496442 agcatagctcagttggaagggacatgcattgttatatg 6496479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 629
Target Start/End: Complemental strand, 11001829 - 11001768
Alignment:
Q  568 tgtgagcataactcagttggcagggacatgcattgttatatgcagagattgagattcgaact 629  Q
    ||||||||||  ||||||| ||| |||||||||| |||||||||||| | | ||||||||||    
T  11001829 tgtgagcataggtcagttgacagagacatgcattattatatgcagaggtcgggattcgaact 11001768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 41288134 - 41288089
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    ||||| |||||||||||||||| ||||  |||||||||||||||||    
T  41288134 gtgagtataactcagttggcagagacaaacattgttatatgcagag 41288089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 628
Target Start/End: Original strand, 42211526 - 42211579
Alignment:
Q  575 ataactcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    |||| ||||||||||| |||||||||||||||||  |||||||||  |||||||    
T  42211526 ataattcagttggcagtgacatgcattgttatatatagagattgaagttcgaac 42211579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 11133075 - 11133119
Alignment:
Q  569 gtgagcataactcagttggcagggaca-tgcattgttatatgcag 612  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||||    
T  11133075 gtgagcatagctcagttggtagggacaatgcattgttatatgcag 11133119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 612
Target Start/End: Complemental strand, 13294464 - 13294436
Alignment:
Q  584 ttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||||||||||||||    
T  13294464 ttggcagggacatgcattgttatatgcag 13294436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 629
Target Start/End: Complemental strand, 27464166 - 27464138
Alignment:
Q  601 tgttatatgcagagattgagattcgaact 629  Q
    |||||||||||||||||||||||||||||    
T  27464166 tgttatatgcagagattgagattcgaact 27464138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 29664602 - 29664646
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||    
T  29664602 gtgagcatagctcaattggcagggacaatgcattgttatatgcag 29664646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 628
Target Start/End: Complemental strand, 29713173 - 29713125
Alignment:
Q  580 tcagttggcagggacatgcattgttatatgcagagattgagattcgaac 628  Q
    |||||||||| |||||| ||||||||||||||| ||||| | |||||||    
T  29713173 tcagttggcacggacatacattgttatatgcagggattggggttcgaac 29713125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 32677335 - 32677375
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatg 609  Q
    |||||||||||||||||| |||| | |||||||||||||||    
T  32677335 gtgagcataactcagttgacaggaatatgcattgttatatg 32677375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Complemental strand, 928 - 883
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcagag 614  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  928 gtgagcataactcagttgtcagggacatacattgttatatgcagag 883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1343 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1343
Description:

Target: scaffold1343; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 572 - 612
Target Start/End: Complemental strand, 969 - 929
Alignment:
Q  572 agcataactcagttggcagggacatgcattgttatatgcag 612  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  969 agcataactcagttggcaagaacatgcattgttatatgcag 929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 25056 - 25013
Alignment:
Q  569 gtgagcataactcagttggcagggacatgcattgttatatgcag 612  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||    
T  25056 gtgagcatatctcagttggcagagacatgcaatgttatatgcag 25013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 12563 - 12608
Alignment:
Q  568 tgtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||    
T  12563 tgtgagcatagctcagttggcagggacaatgcattattatatgcag 12608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Complemental strand, 4901 - 4857
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  4901 gtgagcatagctcagttggcagggacaatgcattattatatgcag 4857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 612
Target Start/End: Original strand, 25025 - 25069
Alignment:
Q  569 gtgagcataactcagttggcagggac-atgcattgttatatgcag 612  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  25025 gtgagcatagctcagttggcagggacaatgcattattatatgcag 25069  T

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