View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3891_low_1 (Length: 846)

Name: NF3891_low_1
Description: NF3891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3891_low_1
NF3891_low_1
[»] chr4 (13 HSPs)
chr4 (1-474)||(34137714-34138195)
chr4 (496-693)||(34139108-34139306)
chr4 (690-836)||(34139330-34139476)
chr4 (536-687)||(34136197-34136348)
chr4 (690-836)||(34136378-34136524)
chr4 (693-836)||(34142013-34142156)
chr4 (633-687)||(34141926-34141980)
chr4 (264-360)||(5535753-5535848)
chr4 (264-355)||(46462419-46462510)
chr4 (264-352)||(21586931-21587019)
chr4 (295-358)||(6087503-6087566)
chr4 (297-351)||(12596748-12596802)
chr4 (264-334)||(23208677-23208747)
[»] chr2 (2 HSPs)
chr2 (268-358)||(29765707-29765797)
chr2 (264-333)||(10099591-10099660)
[»] chr7 (6 HSPs)
chr7 (292-334)||(34564994-34565036)
chr7 (271-334)||(27163196-27163259)
chr7 (264-363)||(37491275-37491374)
chr7 (264-358)||(43813132-43813226)
chr7 (293-358)||(3967773-3967838)
chr7 (264-329)||(6250636-6250701)
[»] chr1 (3 HSPs)
chr1 (286-353)||(44673898-44673965)
chr1 (295-353)||(6340640-6340698)
chr1 (300-352)||(29204487-29204537)
[»] chr3 (1 HSPs)
chr3 (293-358)||(39682616-39682681)
[»] chr5 (3 HSPs)
chr5 (264-339)||(14631042-14631117)
chr5 (264-339)||(18942025-18942100)
chr5 (264-313)||(30489135-30489184)
[»] scaffold0014 (1 HSPs)
scaffold0014 (264-334)||(133176-133246)
[»] chr6 (1 HSPs)
chr6 (264-361)||(7158260-7158357)


Alignment Details
Target: chr4 (Bit Score: 363; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 1 - 474
Target Start/End: Original strand, 34137714 - 34138195
Alignment:
Q  1 ttatatatatacattgaatctagactagttttagagcatatatgtgacttttctctcgtgcttattgtgaaaaatatgaacaaaaactaattttattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34137714 ttatatatatacattgaatctagactagttttagagcatatatgtgacttttctctcgtgcttattgtgaaaaatatgaacaaaaactaattttattact 34137813  T
Q  101 tacttcctaaaaa-gaatattaactgagcattgaccaaattaatcaaatattaacaa-ttaataatattagtaacggt-------agtaatctcacttaa 191  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       |||||||||||||||    
T  34137814 tacttcctaaaaaagaatattaactgagcattgaccaaattaatcaaatattaacaaattaataatattagtaacggtagtcggtagtaatctcacttaa 34137913  T
Q  192 tgcaatcatatctcatataacgtagttagttagcattagttacatgtgatgtcactaacattactatatgatttcattgaataaatgatgtttatagttg 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34137914 tgcaatcatatctcatataacgtagttagttagcattagttacatgtgatgtcactaacattactatatcatttcattgaataaatgatgtttatagttg 34138013  T
Q  292 ataatatagaccacatatatcacttattcaattaacct-aaaaattaaatgtttgcttataattgtgatcaaaaataatattatttagagactttgaata 390  Q
    ||||||||||||   ||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||   ||||||||||||| | ||||||||||||    
T  34138014 ataatatagacctagtatatcacttattcaattaacctaaaaaaataaatttttgcttataattatgattggaaataatattattgaaagactttgaata 34138113  T
Q  391 caaaatattgataacttgtcttctttatatttgacctatattaaaaatgagatacataaattattcaataaatatgtaaaataa 474  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  34138114 caaaatattgataacttgtcttc--tctatttgacctatattaaaaatgaaatacataaattattcaataaatatgaaaaataa 34138195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 496 - 693
Target Start/End: Original strand, 34139108 - 34139306
Alignment:
Q  496 atgagataaattgcatacatactgcacccagtaattctaatagcaagtttgactgtagccagttgctcatttcagaaacaccgatcaatctttggttgtt 595  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34139108 atgagataaattgcatacataatgcacccagtaattctaata-caaatttgattgtagccagttgctcattttagaaacaccgatcaatctttggttgtt 34139206  T
Q  596 tacatgagctaagtaatacatttattaaaatatctttctctaaggtagct--tataatgataaatttgaagattctcctcttcttgtttcttgaggttac 693  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||    
T  34139207 tacatgagctaagtcatacatttattaaaatatctttctctaaggtagcttatataatgataaatttgaagattctcctcttcttgtttcttgaagttac 34139306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 690 - 836
Target Start/End: Original strand, 34139330 - 34139476
Alignment:
Q  690 ttaccccatttataaggcttatattttgaagggttttgctcgttaataagctcctccaaaggcttgatttcaatatcatatcctgggttgaaaaagaatg 789  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34139330 ttaccccatttataaggcttatattttgaagggttttgctcgttaataagctcctccaaaggcttgatttcaatatcatatcctgggttgaaaaagaatg 34139429  T
Q  790 gaatagaaaatctttctttctccttgttcaccaatgctctgtgctcc 836  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34139430 gaatagaaaatctttctttctccttgttcaccaatgctctgtgctcc 34139476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 536 - 687
Target Start/End: Original strand, 34136197 - 34136348
Alignment:
Q  536 tagcaagtttgactgtagccagttgctcatttcagaaacaccgatcaatctttggttgtttacatgagctaagtaatacatttattaaaatatctttctc 635  Q
    |||||| ||||| || ||||| |  |||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||||    
T  34136197 tagcaaatttgattgcagccactcactcatttcagaaacactgatcaatctttggttgtgtaaatgagctaagtgatacatttattaaactatctttctc 34136296  T
Q  636 taaggtagcttataatgataaatttgaagattctcctcttcttgtttcttga 687  Q
    ||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  34136297 tactgtagcttataatgataaatttgaagattctcctcatcttgtttcttga 34136348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 690 - 836
Target Start/End: Original strand, 34136378 - 34136524
Alignment:
Q  690 ttaccccatttataaggcttatattttgaagggttttgctcgttaataagctcctccaaaggcttgatttcaatatcatatcctgggttgaaaaagaatg 789  Q
    |||||||||||||| ||||||||||||| || ||||||||  ||  ||||||||||||||||||||||||||  ||||| |||||| ||||| |||||||    
T  34136378 ttaccccatttatatggcttatattttggagagttttgcttatttgtaagctcctccaaaggcttgatttcagcatcatgtcctggattgaagaagaatg 34136477  T
Q  790 gaatagaaaatctttctttctccttgttcaccaatgctctgtgctcc 836  Q
    |||||||||| || ||||||||||||||||||| | |||| ||||||    
T  34136478 gaatagaaaacctctctttctccttgttcaccattactctatgctcc 34136524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 693 - 836
Target Start/End: Original strand, 34142013 - 34142156
Alignment:
Q  693 ccccatttataaggcttatattttgaagggttttgctcgttaataagctcctccaaaggcttgatttcaatatcatatcctgggttgaaaaagaatggaa 792  Q
    ||||||||||| ||| |||||||||||||||||||||| || |||||||| || ||||| |||| ||||   ||||||||||||   |||||||| ||||    
T  34142013 ccccatttatatggcctatattttgaagggttttgctcatttataagctcttcaaaaggtttgacttcagcgtcatatcctgggaataaaaagaagggaa 34142112  T
Q  793 tagaaaatctttctttctccttgttcaccaatgctctgtgctcc 836  Q
    ||||||| ||||| |||||  || |||| |  ||||||||||||    
T  34142113 tagaaaacctttccttctctgtgctcacaatcgctctgtgctcc 34142156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 633 - 687
Target Start/End: Original strand, 34141926 - 34141980
Alignment:
Q  633 ctctaaggtagcttataatgataaatttgaagattctcctcttcttgtttcttga 687  Q
    ||||| ||||||||||||||||||||||||||||||||| | |||||||||||||    
T  34141926 ctctagggtagcttataatgataaatttgaagattctccacatcttgtttcttga 34141980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 5535753 - 5535848
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattgtgatc 360  Q
    |||||| |||||||||||| | ||||| ||| ||||||||||||| |||| ||||| ||| ||||||| || | ||| |||||||||||| ||||||    
T  5535753 ttcattcaataaatgatgtatgtagtttata-tatagaccacatacatcagttattgaatgaacctaacaagtcaatttttgcttataatagtgatc 5535848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 46462419 - 46462510
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattg 355  Q
    |||||| |||||||||||| ||| ||| |||||| |||| ||||| |||| ||||||||| |||||||||| | ||   |||||||||||||    
T  46462419 ttcattaaataaatgatgtatatggtttataataaagactacatacatcatttattcaatgaacctaaaaagtgaaaaattgcttataattg 46462510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 21587019 - 21586931
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataa 352  Q
    |||||| |||||||||||| | ||||  |||||||||  |||||| |||| ||||| |||| ||||||||| ||||  |||||||||||    
T  21587019 ttcattcaataaatgatgtatgtagtctataatataggacacatacatcatttattgaatttacctaaaaaataaacttttgcttataa 21586931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 6087503 - 6087566
Alignment:
Q  295 atatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattgtga 358  Q
    |||||||| ||||| |||| ||||| ||| || || |||||||||| |||||||||||||||||    
T  6087503 atatagactacatacatcatttattgaataaatctgaaaattaaatttttgcttataattgtga 6087566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 12596748 - 12596802
Alignment:
Q  297 atagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttata 351  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||| |||| |||||    
T  12596748 atagaccacatatatcatttattgaatgaacctaaaaagtaaatttttgtttata 12596802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 23208677 - 23208747
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaa 334  Q
    ||||||| |||| |||||| | || || |||||||||| || |||||||| |||||||| |||||||||||    
T  23208677 ttcattgtataattgatgtatttaatttataatatagatcagatatatcagttattcaactaacctaaaaa 23208747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 268 - 358
Target Start/End: Original strand, 29765707 - 29765797
Alignment:
Q  268 ttgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattgtga 358  Q
    ||||||||||||| | ||| ||| |||||||||||| ||||||||||||||||||| || ||||||| |  || |||| ||||||||||||    
T  29765707 ttgaataaatgatatatatggtttataatatagaccgcatatatcacttattcaatgaatctaaaaagttgatttttggttataattgtga 29765797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 10099591 - 10099660
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaa 333  Q
    |||||| ||| |||||||| | | ||| |||||||||||||||||||||| | ||| ||| |||||||||    
T  10099591 ttcatttaattaatgatgtatgtggtttataatatagaccacatatatcattaattgaatgaacctaaaa 10099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 292 - 334
Target Start/End: Original strand, 34564994 - 34565036
Alignment:
Q  292 ataatatagaccacatatatcacttattcaattaacctaaaaa 334  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  34564994 ataatatagaccacatacatcacttattcaattaacctaaaaa 34565036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 27163259 - 27163196
Alignment:
Q  271 aataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaa 334  Q
    |||||||||||| | | ||| ||||||||||||||||| |||| ||||||||| ||||||||||    
T  27163259 aataaatgatgtatgtggtttataatatagaccacatacatcatttattcaatgaacctaaaaa 27163196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 363
Target Start/End: Complemental strand, 37491374 - 37491275
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattgtgatcaaa 363  Q
    |||||| |||||||||||| ||| ||   | |||||||| ||||| |||| ||||| ||| || ||||||| ||||| |||||||||||| |||| ||||    
T  37491374 ttcatttaataaatgatgtatatggtcacttatatagactacatacatcatttatttaataaatctaaaaagtaaatttttgcttataatagtgaccaaa 37491275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 43813226 - 43813132
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattgtga 358  Q
    |||||| |||||||||||| | | ||  ||| ||||||| |||||  ||| ||||| ||| || ||||||||||||| |||||||||||| ||||    
T  43813226 ttcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattaaatttttgcttataatagtga 43813132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 3967773 - 3967838
Alignment:
Q  293 taatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattgtga 358  Q
    |||||||| ||||||| |||| ||||||||| |||||||||| ||  | |||||||||||| ||||    
T  3967773 taatatagtccacatacatcatttattcaatgaacctaaaaagtagttttttgcttataatagtga 3967838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 6250701 - 6250636
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacct 329  Q
    |||||| |||||||||||| |  |||  |||||||||||||||||||||| ||||| ||| |||||    
T  6250701 ttcatttaataaatgatgtatgcagtatataatatagaccacatatatcatttattgaataaacct 6250636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000008; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 44673965 - 44673898
Alignment:
Q  286 tagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataat 353  Q
    ||||| || ||||||||||||||||||| ||||| ||| |||||||||| ||||| |||| |||||||    
T  44673965 tagtttattatatagaccacatatatcatttattaaataaacctaaaaaataaatttttgtttataat 44673898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 6340640 - 6340698
Alignment:
Q  295 atatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataat 353  Q
    ||||| ||||||||||||| ||||| ||| |||||||||| | ||| ||||||||||||    
T  6340640 atataaaccacatatatcatttattgaatgaacctaaaaagttaatttttgcttataat 6340698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 29204487 - 29204537
Alignment:
Q  300 gaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataa 352  Q
    |||||||||||||| ||||||||| || ||||||||||||  |||||||||||    
T  29204487 gaccacatatatcatttattcaataaatctaaaaattaaa--tttgcttataa 29204537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 39682681 - 39682616
Alignment:
Q  293 taatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattgtga 358  Q
    |||||||||||||||| |||| ||||||||| |||||||||| ||| | ||| |||||||| ||||    
T  39682681 taatatagaccacatacatcatttattcaatgaacctaaaaaataattttttacttataatagtga 39682616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 14631042 - 14631117
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaa 339  Q
    |||||||||||||| || | | ||||  | |||||| |||||||| |||||||||||||| || ||||||||||||    
T  14631042 ttcattgaataaataatatatgtagtctagaatatataccacatacatcacttattcaataaatctaaaaattaaa 14631117  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 18942025 - 18942100
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaa 339  Q
    |||||| ||| |||||||| ||| ||| ||||||||||||||||| |||| | ||| ||| |||||||||| ||||    
T  18942025 ttcattcaattaatgatgtatatggttcataatatagaccacatacatcattaattgaatgaacctaaaaaataaa 18942100  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 30489135 - 30489184
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatca 313  Q
    |||||| ||| ||| |||| ||||||| ||||||||||||||||||||||    
T  30489135 ttcatttaattaattatgtatatagttcataatatagaccacatatatca 30489184  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 133176 - 133246
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaa 334  Q
    |||||| ||||||||||||  |||||  ||||||||||||||||| ||   ||||||||| ||||||||||    
T  133176 ttcattcaataaatgatgtacatagtctataatatagaccacatacattgtttattcaatgaacctaaaaa 133246  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 361
Target Start/End: Complemental strand, 7158357 - 7158260
Alignment:
Q  264 ttcattgaataaatgatgtttatagttgataatatagaccacatatatcacttattcaattaacctaaaaattaaatgtttgcttataattgtgatca 361  Q
    |||||| |||||||||||| ||| ||  | |||| |||||||||| |||| ||||| ||| || ||||||  || || |||||||||| |||||||||    
T  7158357 ttcattcaataaatgatgtatattgtctacaataaagaccacatacatcatttattgaataaatctaaaacatagatttttgcttatatttgtgatca 7158260  T

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