View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3892-Insertion-6 (Length: 374)
Name: NF3892-Insertion-6
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3892-Insertion-6 |
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Alignment Details
Target: chr7 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 8 - 371
Target Start/End: Original strand, 1781892 - 1782255
Alignment:
| Q |
8 |
cttcatacacccatctcccatcacataacctttgaacatgtacatcctacatgctgacttcgtgagaccctcaaaacttttcactaccaagagaaataat |
107 |
Q |
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| T |
1781892 |
cttcatacacccatctcccatcacataacctttgaacatgtacatcctacatgctgacttcgtgagaccctcaaaacttttcactaccaagagaaataat |
1781991 |
T |
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| Q |
108 |
aaagtagcaagggggtctccttgtttaggcctctttgtcgagatttcccctataggacaaccaattaccaaaactaacaaattatttgtacaaatacaag |
207 |
Q |
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| T |
1781992 |
aaagtagcaagggggtctccttgtttaggcctctttgtcgagatttcccctataggacaaccaattaccaaaactaacaaattatttgtacaaatacaag |
1782091 |
T |
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| Q |
208 |
tcttcatctatttaatccaaaaccaaaccttcccagcatatagtccaaaaaagtccaatccaccaggtcataagtttaatcaaatttcacaattaacatc |
307 |
Q |
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| T |
1782092 |
tcttcatccatttaatccaaaaccaaaccttcccagcatatagtccaaaaaagtccaatccaccaggtcataagtttaattaaatttcacaattaacatc |
1782191 |
T |
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| Q |
308 |
aagtagtttttcccccacttcatcctcctcgcatctgaaagtgagaaaaacacaagaaaagggt |
371 |
Q |
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| T |
1782192 |
aagtagtttttcccccacttcatcctcctcgcatctgaaggtgagaaaaacacaagaagagggt |
1782255 |
T |
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