View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3892_high_141 (Length: 226)
Name: NF3892_high_141
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3892_high_141 |
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Alignment Details
Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 10750455 - 10750647
Alignment:
| Q |
17 |
gcaaagggcaaaacggttgggttcttgttcgtgggccggatttgtccggtgggtctcagatcgattcggggagtggaaagttgattcgacgtcgttttgg |
116 |
Q |
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| T |
10750455 |
gcaaagggcaaaacggttgggttcttgttcgtggaccggatttatcggaagggtctcggatcggttcggggaatggaaagttgattcggtgtcgttttgg |
10750554 |
T |
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| Q |
117 |
atgttgctatgtttgtcaatgctatttgcatgggagactgtggaggggctttgaacatagtatccacacgggtaggtttggtatgtcagagtt |
209 |
Q |
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| T |
10750555 |
atgttgctatgtttgtcaatgctatttgcatgggagactgtggaggggctttgaacatagtatccacacgggtaggtttggtatgtcagagtt |
10750647 |
T |
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