View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3892_high_87 (Length: 269)

Name: NF3892_high_87
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3892_high_87
NF3892_high_87
[»] chr6 (73 HSPs)
chr6 (146-262)||(25096552-25096668)
chr6 (6-89)||(12696331-12696414)
chr6 (6-67)||(9025485-9025546)
chr6 (9-89)||(9024145-9024225)
chr6 (7-62)||(29049893-29049946)
chr6 (1-56)||(7265595-7265650)
chr6 (7-54)||(7569172-7569219)
chr6 (1-56)||(20518347-20518402)
chr6 (6-87)||(3398626-3398706)
chr6 (6-67)||(7086802-7086863)
chr6 (9-58)||(13364705-13364754)
chr6 (1-50)||(19040354-19040403)
chr6 (6-63)||(20576628-20576685)
chr6 (1-49)||(1532242-1532290)
chr6 (7-63)||(15443703-15443759)
chr6 (1-56)||(7151414-7151469)
chr6 (1-64)||(7248360-7248423)
chr6 (6-61)||(9195751-9195806)
chr6 (1-48)||(13360382-13360429)
chr6 (1-56)||(14721243-14721298)
chr6 (1-56)||(32511668-32511723)
chr6 (7-50)||(34446573-34446616)
chr6 (1-67)||(9027180-9027246)
chr6 (6-84)||(24138433-24138511)
chr6 (6-56)||(26178683-26178733)
chr6 (6-64)||(26562696-26562754)
chr6 (6-64)||(34073341-34073399)
chr6 (7-56)||(9617442-9617491)
chr6 (5-74)||(10770658-10770727)
chr6 (1-50)||(10842534-10842583)
chr6 (1-50)||(13851738-13851787)
chr6 (1-50)||(30866152-30866201)
chr6 (7-56)||(33340947-33340996)
chr6 (7-56)||(35125102-35125151)
chr6 (8-56)||(9629392-9629440)
chr6 (1-57)||(9658881-9658937)
chr6 (13-89)||(17327624-17327700)
chr6 (1-56)||(7377981-7378036)
chr6 (6-41)||(7977847-7977882)
chr6 (11-50)||(11591878-11591917)
chr6 (7-50)||(12235527-12235570)
chr6 (5-56)||(19044470-19044521)
chr6 (7-61)||(28862129-28862184)
chr6 (7-50)||(34895042-34895085)
chr6 (1-35)||(322521-322555)
chr6 (6-56)||(7996380-7996430)
chr6 (6-56)||(8022371-8022421)
chr6 (6-67)||(8805565-8805624)
chr6 (6-64)||(8931596-8931654)
chr6 (6-64)||(9522898-9522956)
chr6 (1-63)||(10888969-10889031)
chr6 (6-64)||(16766704-16766762)
chr6 (7-45)||(19602194-19602232)
chr6 (6-56)||(21924937-21924987)
chr6 (7-41)||(25038088-25038122)
chr6 (7-41)||(31579242-31579276)
chr6 (2-56)||(33419176-33419230)
chr6 (7-52)||(5462694-5462739)
chr6 (7-56)||(5732512-5732561)
chr6 (7-52)||(6349743-6349788)
chr6 (13-85)||(7942269-7942342)
chr6 (6-63)||(17435206-17435263)
chr6 (9-66)||(19312746-19312803)
chr6 (1-46)||(33817951-33817996)
chr6 (12-56)||(4420181-4420225)
chr6 (11-63)||(8590807-8590859)
chr6 (10-50)||(10157995-10158035)
chr6 (1-41)||(11800890-11800929)
chr6 (6-50)||(12627585-12627629)
chr6 (1-41)||(25096425-25096465)
chr6 (7-59)||(29711270-29711322)
chr6 (5-41)||(31384926-31384962)
chr6 (5-41)||(34595140-34595176)
[»] chr1 (64 HSPs)
chr1 (6-89)||(1486678-1486761)
chr1 (1-67)||(20157341-20157407)
chr1 (1-62)||(6427352-6427413)
chr1 (1-61)||(10572586-10572646)
chr1 (7-58)||(1864880-1864931)
chr1 (1-64)||(25361888-25361951)
chr1 (9-64)||(44482240-44482295)
chr1 (4-50)||(7918219-7918265)
chr1 (6-64)||(21038090-21038148)
chr1 (1-62)||(9828046-9828107)
chr1 (1-50)||(10233255-10233304)
chr1 (3-64)||(12713321-12713382)
chr1 (3-64)||(12717412-12717473)
chr1 (1-50)||(17831539-17831588)
chr1 (7-56)||(28674808-28674857)
chr1 (6-67)||(34712374-34712435)
chr1 (1-62)||(36905999-36906060)
chr1 (1-41)||(34298438-34298478)
chr1 (7-55)||(42325568-42325616)
chr1 (1-48)||(14332652-14332699)
chr1 (1-64)||(17754313-17754376)
chr1 (1-56)||(36878463-36878518)
chr1 (1-78)||(38503322-38503403)
chr1 (1-64)||(40285648-40285711)
chr1 (6-56)||(13436465-13436515)
chr1 (6-56)||(27471568-27471618)
chr1 (6-56)||(38075972-38076022)
chr1 (6-48)||(40181878-40181920)
chr1 (7-65)||(44296488-44296545)
chr1 (1-34)||(609482-609515)
chr1 (11-56)||(23636051-23636096)
chr1 (9-50)||(25098563-25098604)
chr1 (1-50)||(26238121-26238169)
chr1 (7-52)||(42004953-42004998)
chr1 (7-63)||(6612166-6612222)
chr1 (9-49)||(19324572-19324612)
chr1 (6-89)||(19562589-19562673)
chr1 (6-50)||(30847728-30847772)
chr1 (1-61)||(34371716-34371775)
chr1 (1-41)||(41877487-41877527)
chr1 (7-58)||(373055-373106)
chr1 (1-56)||(9709822-9709877)
chr1 (6-41)||(12443477-12443512)
chr1 (6-41)||(18190125-18190160)
chr1 (6-57)||(23738685-23738736)
chr1 (6-41)||(31015050-31015085)
chr1 (6-41)||(37055873-37055908)
chr1 (1-39)||(2896140-2896178)
chr1 (1-63)||(5376495-5376557)
chr1 (6-64)||(8010281-8010339)
chr1 (6-56)||(16927187-16927237)
chr1 (7-89)||(19637776-19637853)
chr1 (6-63)||(113306-113363)
chr1 (1-50)||(398773-398822)
chr1 (9-50)||(2445880-2445921)
chr1 (7-44)||(3921675-3921712)
chr1 (3-64)||(12707867-12707928)
chr1 (5-62)||(24577182-24577239)
chr1 (7-56)||(41017406-41017455)
chr1 (1-37)||(2851023-2851059)
chr1 (10-50)||(12611977-12612017)
chr1 (6-58)||(21378585-21378637)
chr1 (6-34)||(22947746-22947774)
chr1 (6-50)||(49872844-49872888)
[»] chr3 (61 HSPs)
chr3 (2-89)||(29508447-29508535)
chr3 (1-89)||(8039798-8039892)
chr3 (7-64)||(16192744-16192801)
chr3 (7-56)||(20691327-20691376)
chr3 (6-67)||(25948878-25948939)
chr3 (1-86)||(5441005-5441088)
chr3 (6-63)||(11313795-11313852)
chr3 (1-61)||(17005616-17005676)
chr3 (6-86)||(45451560-45451635)
chr3 (1-56)||(7928452-7928507)
chr3 (1-64)||(9800042-9800105)
chr3 (1-48)||(12704009-12704056)
chr3 (7-50)||(52369783-52369826)
chr3 (1-47)||(11493372-11493418)
chr3 (19-89)||(40993309-40993374)
chr3 (7-56)||(40150573-40150622)
chr3 (1-41)||(4990984-4991024)
chr3 (5-89)||(10954958-10955037)
chr3 (7-43)||(21149075-21149111)
chr3 (6-50)||(49505162-49505206)
chr3 (7-50)||(1830351-1830394)
chr3 (7-50)||(3730173-3730216)
chr3 (1-56)||(8383259-8383314)
chr3 (9-56)||(8789552-8789599)
chr3 (7-62)||(11093578-11093633)
chr3 (6-41)||(11251985-11252020)
chr3 (10-61)||(15314873-15314924)
chr3 (6-89)||(27505253-27505336)
chr3 (7-50)||(32804548-32804591)
chr3 (15-49)||(4704301-4704335)
chr3 (6-64)||(4987285-4987343)
chr3 (1-59)||(10690261-10690319)
chr3 (2-32)||(11143240-11143270)
chr3 (7-41)||(21211296-21211330)
chr3 (1-59)||(21478685-21478743)
chr3 (7-45)||(25074797-25074835)
chr3 (7-64)||(2731820-2731877)
chr3 (7-56)||(4201404-4201453)
chr3 (11-56)||(6780421-6780466)
chr3 (9-62)||(8039216-8039269)
chr3 (6-47)||(9624648-9624689)
chr3 (4-41)||(12083908-12083945)
chr3 (7-56)||(13799512-13799561)
chr3 (7-40)||(16789668-16789701)
chr3 (8-89)||(20503474-20503550)
chr3 (7-64)||(23184066-23184123)
chr3 (7-56)||(25093510-25093559)
chr3 (7-67)||(27513653-27513714)
chr3 (6-89)||(28918008-28918088)
chr3 (1-46)||(29112292-29112337)
chr3 (1-50)||(34307788-34307837)
chr3 (1-56)||(2620057-2620110)
chr3 (1-41)||(3618883-3618923)
chr3 (1-49)||(14618783-14618831)
chr3 (1-41)||(14840308-14840348)
chr3 (1-41)||(17568700-17568740)
chr3 (10-58)||(23271994-23272042)
chr3 (1-33)||(24633768-24633800)
chr3 (17-61)||(29386508-29386552)
chr3 (5-41)||(34910323-34910359)
chr3 (6-66)||(49651778-49651838)
[»] chr5 (52 HSPs)
chr5 (1-63)||(15410443-15410505)
chr5 (7-67)||(38749554-38749614)
chr5 (6-78)||(43001807-43001879)
chr5 (6-69)||(6471878-6471941)
chr5 (6-89)||(39205887-39205970)
chr5 (1-89)||(30502362-30502445)
chr5 (1-89)||(30542705-30542788)
chr5 (1-61)||(36838545-36838605)
chr5 (7-57)||(19737483-19737533)
chr5 (7-56)||(2548395-2548444)
chr5 (1-62)||(3966505-3966566)
chr5 (7-56)||(28296336-28296385)
chr5 (6-62)||(17593718-17593774)
chr5 (7-83)||(23015964-23016040)
chr5 (1-41)||(27932237-27932277)
chr5 (6-89)||(31084330-31084413)
chr5 (7-50)||(31264446-31264489)
chr5 (1-51)||(19293430-19293480)
chr5 (1-67)||(38806839-38806905)
chr5 (7-44)||(2419865-2419902)
chr5 (7-48)||(2577190-2577231)
chr5 (1-50)||(12264837-12264886)
chr5 (1-58)||(23220985-23221042)
chr5 (7-56)||(28588676-28588725)
chr5 (2-47)||(35017040-35017085)
chr5 (10-67)||(43208265-43208322)
chr5 (9-89)||(14873527-14873607)
chr5 (9-89)||(18421815-18421890)
chr5 (4-44)||(21194219-21194259)
chr5 (7-63)||(40211964-40212020)
chr5 (6-50)||(41091265-41091309)
chr5 (10-41)||(6326314-6326345)
chr5 (1-64)||(18592075-18592138)
chr5 (7-50)||(18607105-18607148)
chr5 (5-64)||(22423806-22423865)
chr5 (6-89)||(23012382-23012460)
chr5 (10-49)||(24273039-24273078)
chr5 (10-49)||(24389136-24389175)
chr5 (7-50)||(32630743-32630786)
chr5 (1-64)||(32766937-32767000)
chr5 (6-56)||(16203797-16203847)
chr5 (10-88)||(21194098-21194171)
chr5 (7-49)||(41600906-41600948)
chr5 (7-44)||(4344750-4344787)
chr5 (7-44)||(11596469-11596506)
chr5 (1-50)||(19168829-19168878)
chr5 (13-50)||(26205768-26205805)
chr5 (1-50)||(27144465-27144514)
chr5 (1-50)||(34879352-34879401)
chr5 (9-41)||(19438353-19438385)
chr5 (1-33)||(19746717-19746749)
chr5 (11-67)||(41558645-41558701)
[»] chr8 (46 HSPs)
chr8 (1-58)||(7658465-7658522)
chr8 (7-61)||(11803267-11803321)
chr8 (7-55)||(3508060-3508108)
chr8 (6-89)||(12559074-12559158)
chr8 (1-64)||(4611536-4611599)
chr8 (4-46)||(13203646-13203688)
chr8 (1-50)||(34897087-34897136)
chr8 (1-56)||(4786340-4786395)
chr8 (5-56)||(14134705-14134756)
chr8 (1-56)||(18646174-18646229)
chr8 (1-60)||(22493496-22493555)
chr8 (1-48)||(37225753-37225800)
chr8 (1-59)||(7442847-7442905)
chr8 (7-61)||(11927083-11927137)
chr8 (6-56)||(13844598-13844648)
chr8 (7-45)||(14513187-14513225)
chr8 (1-63)||(14634136-14634198)
chr8 (7-56)||(12985400-12985449)
chr8 (1-50)||(24362210-24362259)
chr8 (6-55)||(31236580-31236629)
chr8 (6-50)||(3025558-3025602)
chr8 (6-50)||(14731719-14731763)
chr8 (7-47)||(29198490-29198530)
chr8 (1-49)||(39954288-39954336)
chr8 (1-45)||(40063953-40063997)
chr8 (7-62)||(4122245-4122300)
chr8 (1-56)||(20679397-20679452)
chr8 (7-50)||(28883886-28883929)
chr8 (7-61)||(11944673-11944727)
chr8 (6-56)||(12606831-12606881)
chr8 (7-41)||(24669441-24669475)
chr8 (9-63)||(33389356-33389410)
chr8 (7-85)||(33405362-33405435)
chr8 (1-38)||(18067954-18067991)
chr8 (7-64)||(28819199-28819256)
chr8 (7-56)||(33382021-33382070)
chr8 (7-48)||(34201056-34201097)
chr8 (8-41)||(40332200-40332233)
chr8 (5-41)||(4948658-4948694)
chr8 (5-61)||(15816126-15816182)
chr8 (5-89)||(16641943-16642027)
chr8 (6-62)||(25172694-25172750)
chr8 (10-50)||(26418350-26418390)
chr8 (1-33)||(27067323-27067355)
chr8 (1-53)||(36934672-36934724)
chr8 (1-41)||(37283827-37283867)
[»] chr4 (53 HSPs)
chr4 (1-89)||(36635326-36635415)
chr4 (7-67)||(18513232-18513292)
chr4 (8-53)||(46180941-46180986)
chr4 (6-66)||(15659752-15659812)
chr4 (7-64)||(7012074-7012131)
chr4 (7-52)||(20743284-20743329)
chr4 (7-56)||(40783965-40784014)
chr4 (6-86)||(21945510-21945585)
chr4 (6-85)||(3947739-3947818)
chr4 (1-56)||(5775360-5775415)
chr4 (9-56)||(18576039-18576086)
chr4 (7-50)||(24343515-24343558)
chr4 (6-89)||(29205451-29205529)
chr4 (7-50)||(31243556-31243599)
chr4 (7-46)||(43299983-43300022)
chr4 (7-46)||(43300624-43300663)
chr4 (6-56)||(15029772-15029822)
chr4 (7-49)||(22440609-22440651)
chr4 (6-56)||(33950143-33950193)
chr4 (7-48)||(903930-903971)
chr4 (1-50)||(40613452-40613501)
chr4 (1-50)||(55941011-55941060)
chr4 (1-41)||(8423735-8423775)
chr4 (8-56)||(30103359-30103406)
chr4 (6-46)||(37698719-37698759)
chr4 (7-50)||(5654599-5654642)
chr4 (1-56)||(7214524-7214579)
chr4 (7-50)||(14465302-14465345)
chr4 (1-44)||(17446073-17446116)
chr4 (1-64)||(30982872-30982935)
chr4 (13-89)||(37496718-37496800)
chr4 (5-56)||(54580025-54580076)
chr4 (6-56)||(4672087-4672137)
chr4 (7-45)||(10546156-10546194)
chr4 (8-50)||(11110212-11110254)
chr4 (7-56)||(15835640-15835690)
chr4 (1-55)||(16189711-16189765)
chr4 (7-41)||(32910559-32910593)
chr4 (2-56)||(36386213-36386267)
chr4 (6-64)||(51701265-51701323)
chr4 (1-50)||(6933277-6933326)
chr4 (1-50)||(22596988-22597037)
chr4 (15-64)||(46160912-46160961)
chr4 (1-50)||(56488518-56488567)
chr4 (6-34)||(847958-847986)
chr4 (15-67)||(7970535-7970587)
chr4 (7-67)||(9906782-9906842)
chr4 (8-48)||(9996849-9996889)
chr4 (6-62)||(11596348-11596404)
chr4 (1-53)||(30522920-30522972)
chr4 (1-41)||(38148742-38148782)
chr4 (1-85)||(40179614-40179693)
chr4 (8-56)||(49659525-49659573)
[»] chr7 (64 HSPs)
chr7 (6-89)||(5409805-5409888)
chr7 (10-64)||(17307904-17307958)
chr7 (1-50)||(4909153-4909202)
chr7 (1-62)||(27945043-27945104)
chr7 (7-67)||(5233637-5233697)
chr7 (1-61)||(23128658-23128718)
chr7 (7-59)||(36314626-36314678)
chr7 (1-56)||(5835249-5835304)
chr7 (1-64)||(8160418-8160481)
chr7 (1-64)||(15902824-15902887)
chr7 (6-85)||(21880159-21880233)
chr7 (7-85)||(1433462-1433540)
chr7 (1-67)||(7758324-7758390)
chr7 (7-61)||(44172887-44172941)
chr7 (6-63)||(7328686-7328743)
chr7 (6-87)||(13770698-13770779)
chr7 (1-50)||(22868044-22868093)
chr7 (9-89)||(9778510-9778590)
chr7 (7-67)||(16341504-16341564)
chr7 (1-56)||(29787373-29787426)
chr7 (5-88)||(32093990-32094074)
chr7 (1-86)||(32308122-32308213)
chr7 (1-56)||(20549793-20549848)
chr7 (7-85)||(21138969-21139044)
chr7 (12-63)||(22602705-22602756)
chr7 (7-50)||(27732247-27732290)
chr7 (6-41)||(30813819-30813854)
chr7 (7-50)||(38134414-38134457)
chr7 (6-89)||(43027438-43027521)
chr7 (6-64)||(3142072-3142130)
chr7 (9-67)||(5548686-5548744)
chr7 (1-83)||(22484027-22484104)
chr7 (10-52)||(23930230-23930272)
chr7 (7-65)||(31808502-31808560)
chr7 (7-61)||(35297669-35297723)
chr7 (1-50)||(6630920-6630969)
chr7 (5-50)||(18013082-18013127)
chr7 (7-56)||(21247738-21247787)
chr7 (9-45)||(7133291-7133327)
chr7 (6-50)||(17851438-17851482)
chr7 (1-41)||(28155572-28155612)
chr7 (1-89)||(32287437-32287520)
chr7 (7-67)||(33384573-33384633)
chr7 (6-41)||(2424621-2424656)
chr7 (1-56)||(7546162-7546217)
chr7 (9-56)||(9482944-9482991)
chr7 (1-89)||(10042939-10043029)
chr7 (7-50)||(12278843-12278886)
chr7 (1-56)||(19206052-19206107)
chr7 (7-58)||(44020983-44021034)
chr7 (6-56)||(3721100-3721150)
chr7 (6-56)||(19992008-19992058)
chr7 (8-38)||(24289829-24289859)
chr7 (6-64)||(24339649-24339707)
chr7 (6-56)||(25481909-25481959)
chr7 (7-56)||(2525846-2525895)
chr7 (7-64)||(26329376-26329433)
chr7 (8-41)||(30731046-30731079)
chr7 (7-56)||(38143231-38143280)
chr7 (1-58)||(46644687-46644744)
chr7 (7-67)||(11890910-11890970)
chr7 (10-50)||(18233606-18233646)
chr7 (1-41)||(23191898-23191938)
chr7 (13-57)||(38629965-38630009)
[»] scaffold0036 (1 HSPs)
scaffold0036 (3-61)||(9744-9802)
[»] chr2 (53 HSPs)
chr2 (6-56)||(18889593-18889643)
chr2 (4-89)||(5367197-5367277)
chr2 (1-50)||(21616764-21616813)
chr2 (1-64)||(2665884-2665945)
chr2 (7-83)||(30527570-30527646)
chr2 (1-61)||(44860322-44860382)
chr2 (7-50)||(10535767-10535810)
chr2 (5-64)||(12668417-12668476)
chr2 (7-50)||(18570980-18571023)
chr2 (1-56)||(42832278-42832333)
chr2 (1-55)||(23718028-23718082)
chr2 (7-41)||(23921261-23921295)
chr2 (1-55)||(24105700-24105754)
chr2 (7-56)||(2415325-2415374)
chr2 (1-50)||(4229416-4229465)
chr2 (7-52)||(12748692-12748737)
chr2 (5-62)||(18622612-18622669)
chr2 (1-50)||(29970557-29970606)
chr2 (7-56)||(34006993-34007042)
chr2 (7-48)||(36281693-36281734)
chr2 (1-50)||(37411252-37411301)
chr2 (7-56)||(40361756-40361805)
chr2 (20-89)||(41843462-41843531)
chr2 (13-49)||(15909641-15909677)
chr2 (6-62)||(18420430-18420486)
chr2 (5-89)||(18840987-18841066)
chr2 (7-51)||(19613620-19613664)
chr2 (1-41)||(25846743-25846783)
chr2 (1-57)||(28121550-28121606)
chr2 (1-41)||(39323266-39323306)
chr2 (9-48)||(17520080-17520119)
chr2 (1-56)||(18276523-18276578)
chr2 (6-41)||(21374716-21374751)
chr2 (6-41)||(21782835-21782870)
chr2 (7-50)||(24011044-24011087)
chr2 (7-50)||(25544489-25544532)
chr2 (1-48)||(28677911-28677958)
chr2 (7-50)||(35449521-35449564)
chr2 (7-58)||(39279683-39279734)
chr2 (8-67)||(44776608-44776667)
chr2 (1-39)||(2331796-2331834)
chr2 (6-56)||(34691807-34691857)
chr2 (6-56)||(34714219-34714269)
chr2 (7-57)||(44605140-44605190)
chr2 (13-58)||(8300219-8300264)
chr2 (9-50)||(11308012-11308053)
chr2 (7-56)||(22085012-22085061)
chr2 (7-56)||(31026703-31026752)
chr2 (1-50)||(31808079-31808128)
chr2 (11-56)||(45000848-45000893)
chr2 (6-50)||(896218-896262)
chr2 (5-61)||(36756341-36756397)
chr2 (12-56)||(38355889-38355933)
[»] scaffold0020 (2 HSPs)
scaffold0020 (6-67)||(135303-135364)
scaffold0020 (8-62)||(137789-137843)
[»] scaffold0044 (1 HSPs)
scaffold0044 (8-89)||(53189-53276)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-41)||(92809-92849)
[»] scaffold1528 (1 HSPs)
scaffold1528 (1-64)||(1037-1100)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-64)||(44519-44582)
[»] scaffold0022 (2 HSPs)
scaffold0022 (7-62)||(99901-99956)
scaffold0022 (1-46)||(90845-90890)
[»] scaffold0024 (1 HSPs)
scaffold0024 (13-67)||(18099-18153)
[»] scaffold0110 (1 HSPs)
scaffold0110 (7-68)||(28858-28919)
[»] scaffold0011 (1 HSPs)
scaffold0011 (7-56)||(240023-240072)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-75)||(23440-23496)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-37)||(63775-63811)
scaffold0049 (9-64)||(56932-56987)
[»] scaffold0598 (1 HSPs)
scaffold0598 (7-45)||(8066-8104)
[»] scaffold0376 (1 HSPs)
scaffold0376 (6-56)||(6319-6369)
[»] scaffold0320 (1 HSPs)
scaffold0320 (7-57)||(17037-17087)
[»] scaffold0050 (1 HSPs)
scaffold0050 (7-85)||(70286-70359)
[»] scaffold0018 (1 HSPs)
scaffold0018 (7-41)||(192266-192300)
[»] scaffold0008 (1 HSPs)
scaffold0008 (6-64)||(263366-263424)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-34)||(26395-26428)
[»] scaffold0361 (1 HSPs)
scaffold0361 (5-41)||(14536-14572)
[»] scaffold0306 (1 HSPs)
scaffold0306 (5-37)||(13406-13438)
[»] scaffold0152 (1 HSPs)
scaffold0152 (5-37)||(21889-21921)


Alignment Details
Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 25096552 - 25096668
Alignment:
Q  146 agttattcaatataacttttgatttgaaacatttttgaattaatttctattacatgatatgatactaatattctaaatcattcacagatgcttgagaatg 245  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| |||||||||| ||||| |||||||||||||||||||||    
T  25096552 agttattcaatataacttttgatttgaaacatttttgaatttatttcaattacaagatatgctactaatattgtaaatgattcacagatgcttgagaatg 25096651  T
Q  246 ctggatttgatgatgtc 262  Q
    |||||||||||||||||    
T  25096652 ctggatttgatgatgtc 25096668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 12696331 - 12696414
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||| ||||||||||||||||||||||| | | ||||  |||| |||||||||| ||||| |||| ||||||||||    
T  12696331 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtctgacaccggga 12696414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 9025546 - 9025485
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgaca 9025485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 9024225 - 9024145
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||||| |||||||||| |||||||||||||||  |||| |||||||||| |  |||| ||| |||||||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgtgtcggacacgggacatatccaacaccggga 9024145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 29049893 - 29049946
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  29049893 taataatttgagaaaattacataattcaatgtaatc--atgtgttggtgttgtgtc 29049946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7265650 - 7265595
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  7265650 caccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 7265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 7569219 - 7569172
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggt 54  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattataggtgttggt 7569172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20518347 - 20518402
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||||    
T  20518347 caccactaacaatttgagaaaattacataaatcagtataattatatgtgttggtgt 20518402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 3398626 - 3398706
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccgg 87  Q
    |||||||||||| ||||| | ||||||||||||||| ||| || | ||||| |||| ||||| |||||||||||||||||||    
T  3398626 ctaataatttga-aaaatcatataattcagtgtaattataagtatcggtgtcgtgttggacacgacacatgtccgacaccgg 3398706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 7086802 - 7086863
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||||| ||||    
T  7086802 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtcagaca 7086863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 13364754 - 13364705
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttg 13364705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19040354 - 19040403
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  19040354 caccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 19040403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 20576685 - 20576628
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    ||||||||| ||||||||| |||||||||||||||| ||| |||||||||| ||||||    
T  20576685 ctaataattcgagaaaattgcataattcagtgtaattataagtgttggtgtcgtgtcg 20576628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1532242 - 1532290
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  1532242 caccgctaataatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 15443703 - 15443759
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    ||||||||||||||||| |||||||||| | |||| |||| ||||||||||||||||    
T  15443703 taataatttgagaaaataacataattcaatataattatatatgttggtgttgtgtcg 15443759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7151414 - 7151469
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||| ||||| |||||||| |||||||| ||||||||||||||    
T  7151414 cacctctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgt 7151469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7248360 - 7248423
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||| |||| |||| ||||||||||| ||||| ||||||||||| || |||||||    
T  7248360 caccactaataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcgg 7248423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 9195806 - 9195751
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    |||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13360429 - 13360382
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  13360429 caccactagtaatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14721243 - 14721298
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||| ||||||||| |||||||||||||||||| | |||| ||||||||||||||    
T  14721243 caccattaataatttaagaaaattacataattcactataattatatgtgttggtgt 14721298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32511723 - 32511668
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||| ||||||| ||||||||||||||||| ||| ||||||||||    
T  32511723 caccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgt 32511668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 34446573 - 34446616
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  34446573 taataatttgagaaaatgacataattcagtgtaatcataggtgt 34446616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9027180 - 9027246
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||| |||||||||||||| ||| ||||||||| ||||||| |||||||| ||||| ||||| ||||    
T  9027180 caccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgaca 9027246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 24138433 - 24138511
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacac 84  Q
    |||||||||||| ||||| | |||||| |||||| | |||||| | |||||||||| ||||||||||| |||| |||||    
T  24138433 ctaataatttgaaaaaatcatataattaagtgtatttatatgtatcggtgttgtgttggacatgacacgtgtctgacac 24138511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 26178733 - 26178683
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  26178733 ctaataatttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 26562696 - 26562754
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||| | ||| |||||||    
T  26562696 ctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcgg 26562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 34073399 - 34073341
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||||||||  |||||||||||||||| ||||| || ||||| |||||||    
T  34073399 ctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcgg 34073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 9617442 - 9617491
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| |||||||||| |||||| |||||||| |||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9617491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 10770727 - 10770658
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacaca 74  Q
    ||||||||||||| ||||| ||||||||||||||||| | | |||| ||||| ||||| |||| ||||||    
T  10770727 actaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacacgacaca 10770658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10842534 - 10842583
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||| ||||| |||||||| |||||||||||||||||    
T  10842534 caccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgt 10842583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13851738 - 13851787
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| || |||||||||||||| ||||||||    
T  13851738 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 13851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30866201 - 30866152
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| |||||||||| |||||| ||||||||    
T  30866201 caccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 33340996 - 33340947
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| |||||| ||| || ||||||||||||||||||    
T  33340996 taataatttgagaaaatcacataactcaatggaatcatatgtgttggtgt 33340947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 35125102 - 35125151
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| |||||| ||| || ||||||||||||||||||    
T  35125102 taataatttgagaaaatcacataactcaatggaatcatatgtgttggtgt 35125151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 9629392 - 9629440
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||| |||||||||| |||||| |||||||| |||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9658881 - 9658937
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 57  Q
    |||| |||||||||| ||||||| ||||||||||||||||| |||| ||| ||||||    
T  9658881 caccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgtt 9658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 17327700 - 17327624
Alignment:
Q  13 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||| |||||||| |||||||  ||||||||  |||| |||||||||| ||||| |||| ||||| ||||    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacaggga 17327624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7377981 - 7378036
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||| ||||||||||||| |||||||||| |||||| |||||||| |||||    
T  7377981 caccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 7378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 7977882 - 7977847
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||| |||||||||||||||||||||||    
T  7977882 ctaataatttgaaaaaattacataattcagtgtaat 7977847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 11591917 - 11591878
Alignment:
Q  11 aatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgt 11591878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 12235570 - 12235527
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||    
T  12235570 taataattagagaaaatgacataattcagtgtaatcataggtgt 12235527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 19044470 - 19044521
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||| || |||||||||||||| || |||||||| |||||    
T  19044470 actaataatttgagaatatcacataattcagtgttattatatgtgtcggtgt 19044521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 28862129 - 28862184
Alignment:
Q  7 taataatttgagaaaattacat-aattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||| ||||| ||||    
T  28862129 taataatttgataaaatgacattaattcagtgtaatcatatgtgtcggtgtcgtgt 28862184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 34895085 - 34895042
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||    
T  34895085 taataatttgagaaaattatacaattcagtgtaatcataggtgt 34895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 322521 - 322555
Alignment:
Q  1 caccactaataatttgagaaaattacataattcag 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  322521 caccactaataatttaagaaaattacataattcag 322555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 7996430 - 7996380
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||| | ||||||||||||||| ||||| || |||||    
T  7996430 ctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 7996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 8022371 - 8022421
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||| | ||||||||||||||| ||||| || |||||    
T  8022371 ctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 8022421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 8805624 - 8805565
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||||||||||||| |||||||| ||||||||  ||||||| ||||| ||||| ||||    
T  8805624 ctaataatttgagaaaatcacataatttagtgtaat--tatgtgtcggtgtagtgtcagaca 8805565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 8931654 - 8931596
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| ||||||||||||| |||||||||||| |||| |||||||| | ||| |||||||    
T  8931654 ctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtcgg 8931596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 9522898 - 9522956
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||| | ||||| ||||||||||||||||| | | |||| |||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcgg 9522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10889031 - 10888969
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||| |||||||||||| ||||| |||||||| ||||| || ||||||||| |||| ||||||    
T  10889031 caccgctaataatttgataaaatcacataatttagtgtgattatatgtgttagtgtcgtgtcg 10888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 16766704 - 16766762
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||||| ||||| ||||||||||||||||| | | |||| ||||| |||||||    
T  16766704 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 16766762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 19602232 - 19602194
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcata 45  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  19602232 taataatttgagaaaatgatataattcagtgtaatcata 19602194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 21924987 - 21924937
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||| || | ||||||||||||||| |||||||| |||||    
T  21924987 ctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgt 21924937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 25038122 - 25038088
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||||||||||||| ||||||||    
T  25038122 taataatttgagaaaattacataatttagtgtaat 25038088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 31579276 - 31579242
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||| |||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaat 31579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 33419176 - 33419230
Alignment:
Q  2 accactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||| ||| | | |||||||| |||||| ||||||||||||||    
T  33419176 accactaataatttgaaaaattgatataattcaatgtaattatatgtgttggtgt 33419230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 5462694 - 5462739
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttg 52  Q
    ||||||||||||||||| |||||||||| |||||| |||| |||||    
T  5462694 taataatttgagaaaatcacataattcattgtaattatatatgttg 5462739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 5732561 - 5732512
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| ||||| || |||||||| |||||||| |||||    
T  5732561 taataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgt 5732512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 6349788 - 6349743
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttg 52  Q
    ||||||||||| |||||||||||||||| |||||| | ||||||||    
T  6349788 taataatttgaaaaaattacataattcattgtaattacatgtgttg 6349743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 7942269 - 7942342
Alignment:
Q  13 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca-tgacacatgtccgacacc 85  Q
    ||||||| ||| |||||||||| |||||||| ||||||  ||| ||||||||||| |||||| |||| ||||||    
T  7942269 tttgagacaatgacataattcaatgtaatcacatgtgtcagtgctgtgtcggacactgacacgtgtcggacacc 7942342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 17435206 - 17435263
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||||||||| | ||||||||||||||||||||||| | | ||||| ||||| |||||    
T  17435206 ctaataattttaaaaaattacataattcagtgtaattacaagtgttagtgttttgtcg 17435263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 19312746 - 19312803
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggac 66  Q
    ||||||| | ||||||||| ||||||  |||||||| ||||||||||| |||||||||    
T  19312746 ataattttaaaaaattacaaaattcaaagtaatcatgtgtgttggtgtcgtgtcggac 19312803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33817951 - 33817996
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatat 46  Q
    |||| ||||||||| ||||||||| |||||||||||||||| ||||    
T  33817951 caccgctaataattggagaaaatttcataattcagtgtaattatat 33817996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 4420225 - 4420181
Alignment:
Q  12 atttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| | |||||||||||||| |||| ||||||||||    
T  4420225 atttgagaaaatgatataattcagtgtaaccataggtgttggtgt 4420181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 8590859 - 8590807
Alignment:
Q  11 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||||||||||||||| || ||| |||||||||||||||| | ||| ||||||    
T  8590859 aatttgagaaaattacgtatttcggtgtaatcatatgtgtcgttgtcgtgtcg 8590807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 10157995 - 10158035
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||| |||||||||| |||||||| ||||||    
T  10157995 taatttgagaaaatgacataattcaatgtaatcacatgtgt 10158035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11800890 - 11800929
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  11800890 caccattaataatttgagaaaattacataatt-agtgtaat 11800929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 12627629 - 12627585
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||| ||| ||||| ||||||||||||||||| ||||||||    
T  12627629 ctaataatgtgaaaaaatcacataattcagtgtaataatatgtgt 12627585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25096425 - 25096465
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||||||||| |||||||  ||||||||    
T  25096425 caccactaataatttgagaaaatcacataatctagtgtaat 25096465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 29711270 - 29711322
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgt 59  Q
    ||||||||||||||||| |||||||||| | ||| || |||||| ||||||||    
T  29711270 taataatttgagaaaatgacataattcattataaccacatgtgtcggtgttgt 29711322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 31384926 - 31384962
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  31384926 actaataatttgaaaaaatcacataattcagtgtaat 31384962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 34595140 - 34595176
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  34595140 actaataatttgaaaaaatcacataattcagtgtaat 34595176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 1486761 - 1486678
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||| ||||| ||||||||||||||||| ||| |||| ||||| |||||||||| ||||| |||||||||||||||    
T  1486761 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccggga 1486678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20157407 - 20157341
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||| |||||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||    
T  20157407 caccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgaca 20157341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6427352 - 6427413
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||| |||||||||||||||||| |||||||||| |||||| |||||||||||||| |||||    
T  6427352 caccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10572646 - 10572586
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||||||||||||||| ||||||||| ||||||| | |||||| ||||||||||    
T  10572646 caccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgt 10572586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 1864931 - 1864880
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttg 1864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25361888 - 25361951
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||| ||||||||||||||| ||||||||||||||||| ||||||||  |||| |||||||    
T  25361888 caccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcgg 25361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 44482240 - 44482295
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcgg 44482295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 7918265 - 7918219
Alignment:
Q  4 cactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  7918265 cactaataatttgagaaaatcacataattcagtgtaattatatgtgt 7918219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 21038090 - 21038148
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||  |||| |||||||    
T  21038090 ctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcgg 21038148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9828046 - 9828107
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    ||||||||||||||||| ||||| |||||||||||||||||  ||||||| ||||| |||||    
T  9828046 caccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtc 9828107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10233255 - 10233304
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  10233255 caccactaataaattgagaaaatcacataattcagtgtaattatatgtgt 10233304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 12713382 - 12713321
Alignment:
Q  3 ccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||| ||||||| |||||||| |||||||| |||||| |||||||| ||||||    
T  12713382 ccactaataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcgg 12713321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 12717473 - 12717412
Alignment:
Q  3 ccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||| ||||||| |||||||| |||||||| |||||| |||||||| ||||||    
T  12717473 ccactaataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcgg 12717412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17831588 - 17831539
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  17831588 caccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgt 17831539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 28674808 - 28674857
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  28674808 taataatttgagaaaattacataattcagtataattatatatgttggtgt 28674857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 34712435 - 34712374
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||  |||| ||||||||||    
T  34712435 ctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggaca 34712374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36905999 - 36906060
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||| |||||||| ||||||||| ||||||||||| ||||| ||||||||||| ||||||||    
T  36905999 caccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtc 36906060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34298438 - 34298478
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  34298438 caccactaataatttgagaaaatcacataattcagtgtaat 34298478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 42325568 - 42325616
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtg 55  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  42325568 taataatttgagaaaatgacataattcagtgtaacaatatgtgttggtg 42325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14332699 - 14332652
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  14332699 caccactaataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17754313 - 17754376
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| |||||||||||| ||||||||||||||||||||||  ||||||||  |||| |||||||    
T  17754313 caccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 17754376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36878463 - 36878518
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||| |||| |||||    
T  36878463 caccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38503322 - 38503403
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt--tgt--gtcggacatgacacatgtc 78  Q
    |||| |||||||||||||||||| | ||| ||||||||||| |||||||| |||||  |||  |||||||||||||||||||    
T  38503322 caccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcggtcggacatgacacatgtc 38503403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40285711 - 40285648
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| ||||||||||||||||||  |||||||||||||| |||||||||| | ||| |||||||    
T  40285711 caccgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgtcgg 40285648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 13436465 - 13436515
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||| || |||| ||||||||||||||||| ||||||||||||||    
T  13436465 ctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgt 13436515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 27471618 - 27471568
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||  ||||||||||||||||| | ||||||||||||    
T  27471618 ctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgt 27471568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 38076022 - 38075972
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||| |||||    
T  38076022 ctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgt 38075972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 40181878 - 40181920
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 44296545 - 44296488
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgga 65  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||| ||||| ||||||||    
T  44296545 taataatttgagaaaatgacataatttagt-taatcatatgtgtcggtgtcgtgtcgga 44296488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 609515 - 609482
Alignment:
Q  1 caccactaataatttgagaaaattacataattca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  609515 caccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 23636096 - 23636051
Alignment:
Q  11 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||    
T  23636096 aatttgagaaaattacataattcagtgtaattgtatgtgtcggtgt 23636051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 25098604 - 25098563
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26238169 - 26238121
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  26238169 caccgctaataatttgagaaaataacataattcagtgtaat-atatgtgt 26238121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 42004998 - 42004953
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttg 52  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  42004998 taataatttgagaaaatgacataatttagtgtaatcataggtgttg 42004953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 6612222 - 6612166
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    ||||||||||| ||||||||||||||||||||||| | | |||| ||||| ||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcg 6612166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 19562673 - 19562589
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt-tgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||| |||||  |||||||| |  |||| |||||||||| ||||    
T  19562673 ctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtcagtgtcggatacaacacgtgtccgacacaggga 19562589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 30847772 - 30847728
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||    
T  30847772 ctaataatttgaaaaaatgacataattcaatgtaatcatatgtgt 30847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34371716 - 34371775
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    |||| ||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  34371716 caccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41877527 - 41877487
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  41877527 caccgctaataatttgagaaaattacataatttagtgtaat 41877487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 373055 - 373106
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||||||||||||||| |||| ||| ||| ||||||||||||| |||||||    
T  373055 taataatttgagaaaatgacatgatttagtttaatcatatgtgtcggtgttg 373106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9709822 - 9709877
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| |||||||||  |||||| |||||||| |||||    
T  9709822 caccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgt 9709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 12443512 - 12443477
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  12443512 ctaataatttgagaaaatcacataattcagtgtaat 12443477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 18190160 - 18190125
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||| |||||||||||||||||||||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaat 18190125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 23738685 - 23738736
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 57  Q
    |||||||||||| ||||| ||||||||||||| ||| | |||||||||||||    
T  23738685 ctaataatttgaaaaaatcacataattcagtgcaattaaatgtgttggtgtt 23738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 31015050 - 31015085
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaat 31015085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 37055908 - 37055873
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||||||||||||| ||||||||    
T  37055908 ctaataatttgagaaaattacataatttagtgtaat 37055873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2896178 - 2896140
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgta 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  2896178 caccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5376557 - 5376495
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||| |||||||||| ||||||| ||||||||||||||||| | | |||| ||||| ||||||    
T  5376557 caccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcg 5376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 8010339 - 8010281
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||||| ||||||| |||||||||| |||| ||| |||| | |||||||||||    
T  8010339 ctaataatttgaaaaaattatataattcagtataattataagtgtcgatgttgtgtcgg 8010281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 16927237 - 16927187
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| ||||| | ||||||||||||||| |||| |||||||||    
T  16927237 ctaataatttgaaaaaatcatataattcagtgtaattatatatgttggtgt 16927187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 19637776 - 19637853
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||| ||||||| |||| ||||| ||||||||||||||| |     |||||||||| || |||| |||||||||||||    
T  19637776 taataatttaagaaaatgacattattcaatgtaatcatatgtgtcg-----gtgtcggacacgatacatatccgacaccggga 19637853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 113306 - 113363
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||||||||||| ||||| ||||||||||||||||| | | |||| ||||| ||||||    
T  113306 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcg 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 398822 - 398773
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||| ||||    
T  398822 caccgctaataatttgaaaaaatcacataattcagtgtaattataggtgt 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 2445880 - 2445921
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||| |||||||||| | |||||||||||||    
T  2445880 ataatttgagaaaatgacataattcaatttaatcatatgtgt 2445921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 3921675 - 3921712
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcat 44  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  3921675 taataatttgagaaaatgacataattcaatgtaatcat 3921712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 12707928 - 12707867
Alignment:
Q  3 ccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||| ||||||| | |||||| |||| ||| |||||| |||||||| ||||||    
T  12707928 ccactaataatttaagaaaatcatataatttagtgcaattatatgtattggtgttatgtcgg 12707867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 24577239 - 24577182
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    ||||||||||||| ||||| ||||||||||||||||| | | |||| ||||| |||||    
T  24577239 actaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 41017455 - 41017406
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| |||||||| | |||||| |||| |||||||||    
T  41017455 taataatttgagaaaatgacataatttaatgtaattatatatgttggtgt 41017406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2851023 - 2851059
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtg 37  Q
    |||| |||||||||||| |||||||||||||||||||    
T  2851023 caccgctaataatttgataaaattacataattcagtg 2851059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 12611977 - 12612017
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  12611977 taatttgaaaaaatcacataattgagtgtaatcatatgtgt 12612017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 21378585 - 21378637
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||||| |||| ||||||||||||||||||||||| | | |||| |||||||    
T  21378585 ctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgttg 21378637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 22947746 - 22947774
Alignment:
Q  6 ctaataatttgagaaaattacataattca 34  Q
    |||||||||||||||||||||||||||||    
T  22947746 ctaataatttgagaaaattacataattca 22947774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 49872844 - 49872888
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||| ||||||||||| || ||||||||||||||| ||||||||    
T  49872844 ctaatcatttgagaaaactatataattcagtgtaattatatgtgt 49872888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 29508447 - 29508535
Alignment:
Q  2 accactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt-gtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||||||| ||||| | ||||||||||||||| |||||||| | |||| |||||||||| |||||| ||||||||||||||    
T  29508447 accactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccggga 29508535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8039892 - 8039798
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt------tgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||| |||||       ||||||||||||| ||||||||||||||||||    
T  8039892 caccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccggga 8039798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 16192801 - 16192744
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcgg 16192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 20691327 - 20691376
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgt 20691376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 25948939 - 25948878
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||||||| ||||| ||||||||||||||||| ||| |||||||||| ||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggaca 25948878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5441088 - 5441005
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccg 86  Q
    |||| |||| ||||||||||||| |||||||||| || |||  ||||||| ||||||||||| |||| ||||||||||| ||||||    
T  5441088 caccgctaaaaatttgagaaaatcacataattcaatggaat--tatgtgtcggtgttgtgtcagacacgacacatgtccaacaccg 5441005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11313852 - 11313795
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||| |||| ||||||    
T  11313852 ctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgtcg 11313795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17005676 - 17005616
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||||||||| ||||| | ||||||||||||||| ||| |||| ||||||||||    
T  17005676 caccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgt 17005616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 45451560 - 45451635
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccg 86  Q
    |||||||||||||||||| ||||| |||||| |||| |||||||| |     |||||||||| ||||||||||||||||||    
T  45451560 ctaataatttgagaaaatcacatacttcagtataataatatgtgtcg-----gtgtcggacacgacacatgtccgacaccg 45451635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7928452 - 7928507
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||| ||||| ||||||||||||||||| |||||||| |||||    
T  7928452 caccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgt 7928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9800042 - 9800105
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| |||||||||||||||||||||||||||| |||||||  || |||| ||||| |||||||    
T  9800042 cacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcgg 9800105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12704009 - 12704056
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  12704009 caccactaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 52369783 - 52369826
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  52369783 taataatttgagaaaattacataattcaatgtaatcataggtgt 52369826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11493418 - 11493372
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatg 47  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  11493418 caccactaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 40993374 - 40993309
Alignment:
Q  19 aaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||| ||||||||||||||||| |||||||| |     |||||||||| |||||||||||||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacaccggga 40993309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 40150622 - 40150573
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  40150622 taataatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgt 40150573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4991024 - 4990984
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  4991024 caccgctaatagtttgagaaaattacataattcagtgtaat 4990984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 10954958 - 10955037
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||| ||||| ||||||||||||||||||| | |||| |     |||||||||| ||||| |||||||||| ||||    
T  10954958 actaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcg-----gtgtcggacacgacacgtgtccgacactggga 10955037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 21149075 - 21149111
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatca 43  Q
    ||||||||||||||||| |||||||||||||||||||    
T  21149075 taataatttgagaaaatgacataattcagtgtaatca 21149111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 49505206 - 49505162
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||    
T  49505206 ctaataatttgagaaaatcacataatttagtgtaattatatgtgt 49505162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 1830351 - 1830394
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  1830351 taataatttaagaaaatgacataattcagtgtaatcataggtgt 1830394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 3730216 - 3730173
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||    
T  3730216 taataatttgagataatgacataattcagtgtaatcataggtgt 3730173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8383259 - 8383314
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| | ||||||||||||||| ||| |||| |||||    
T  8383259 caccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgt 8383314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 8789599 - 8789552
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgt 8789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 11093578 - 11093633
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    ||||||||||| ||||| ||||||||||  ||||||| |||||||||||| |||||    
T  11093578 taataatttgaaaaaatgacataattcaaagtaatcagatgtgttggtgtcgtgtc 11093633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 11251985 - 11252020
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  11251985 ctaataatttgagaaaatcacataattcagtgtaat 11252020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 15314924 - 15314873
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    |||||||| ||||| |||||||| |||||||| |||||||||||||| ||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 27505253 - 27505336
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||   ||||| |||||||| |||||||| | | |||| ||||| ||||| |||| ||||| |||||||||||||||    
T  27505253 ctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccggga 27505336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 32804591 - 32804548
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtgt 32804548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 4704335 - 4704301
Alignment:
Q  15 tgagaaaattacataattcagtgtaatcatatgtg 49  Q
    ||||||||| |||||||||||||||||||||||||    
T  4704335 tgagaaaatgacataattcagtgtaatcatatgtg 4704301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 4987343 - 4987285
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||||| ||||| ||||||||||||||||| | | |||||||||  |||||||    
T  4987343 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcgg 4987285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10690319 - 10690261
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgt 59  Q
    |||| |||||||| ||||||||| ||||||||||||||||| |||| ||| ||| ||||    
T  10690319 caccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcggtattgt 10690261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 11143240 - 11143270
Alignment:
Q  2 accactaataatttgagaaaattacataatt 32  Q
    |||||||||||||||||||||||||||||||    
T  11143240 accactaataatttgagaaaattacataatt 11143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 21211296 - 21211330
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||||||||| |||||||||||    
T  21211296 taataatttgagaaaattacatagttcagtgtaat 21211330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21478685 - 21478743
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgt 59  Q
    ||||| ||||||||| | || || |||||| ||| ||||||||||||||||||||||||    
T  21478685 caccaataataatttcacaagatgacataaatcaatgtaatcatatgtgttggtgttgt 21478743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 25074797 - 25074835
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcata 45  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  25074797 taataatttgagaaaatgacataattgagtgtaatcata 25074835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 2731820 - 2731877
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||| ||| ||||||| |||||||| |||||||| ||||||||  ||||||||||||    
T  2731820 taatactttaagaaaatcacataattaagtgtaattatatgtgtatgtgttgtgtcgg 2731877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 4201404 - 4201453
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||| ||||| |||||||| |||||||| |||| |||||||||    
T  4201404 taataatttgaaaaaatcacataattaagtgtaattatatatgttggtgt 4201453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 6780466 - 6780421
Alignment:
Q  11 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||| || || ||||||||||| ||||||||||||||    
T  6780466 aatttgagaaaatcacgtagttcagtgtaattatatgtgttggtgt 6780421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 8039216 - 8039269
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||||||||||||||  ||| ||||| |||||||||| |||| |||||||||||    
T  8039216 ataatttgagaaaatggcatgattcaatgtaatcataggtgtcggtgttgtgtc 8039269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 9624648 - 9624689
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatg 47  Q
    |||||||||||||||||| |||||||||| |||||| |||||    
T  9624648 ctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 12083908 - 12083945
Alignment:
Q  4 cactaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  12083908 cactaataaattgagaaaactacataattcagtgtaat 12083945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 13799512 - 13799561
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||| ||||||||||| |||||||| |||||||| |||||||| |||||    
T  13799512 taatagtttgagaaaatgacataattaagtgtaataatatgtgtcggtgt 13799561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 16789701 - 16789668
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaa 40  Q
    ||||||||||||||||| ||||||||||||||||    
T  16789701 taataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 20503474 - 20503550
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||| ||||| ||||||||||||||||| | | |||| ||||||     ||||| |||||||||| ||||||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtt-----ggacacgacacatgtctgacaccggga 20503550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 23184123 - 23184066
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||| ||||| | |||||||  |||||| |||||||||||| |||||||||    
T  23184123 taataatttgacaaaatcatataattctatgtaattatatgtgttggtattgtgtcgg 23184066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 25093510 - 25093559
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||| ||| ||||||||||||| |||||||| |||||    
T  25093510 taatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 25093559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 27513714 - 27513653
Alignment:
Q  7 taataatttgagaaaatt-acataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||||||||||| | |||| ||||| ||||||||||||||| |||||  |||||||||    
T  27513714 taataatttgagaaaaatgacattattcaatgtaatcatatgtgtcggtgtcttgtcggaca 27513653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 28918008 - 28918088
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||| ||||| ||||||||||||||||| | | |||| ||||| ||   ||||| ||||| |||||||||| ||||    
T  28918008 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt---ggacacgacacgtgtccgacactggga 28918088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29112337 - 29112292
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatat 46  Q
    |||||||||| |||||||||||| | ||||||||||||||| ||||    
T  29112337 caccactaattatttgagaaaatcatataattcagtgtaattatat 29112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34307837 - 34307788
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| ||||| ||||||||||| ||| ||||    
T  34307837 caccgctaataatttgagaaaatcacatatttcagtgtaattataagtgt 34307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2620110 - 2620057
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||| |||||||||||| |||||||| |||||||   |||||||||||||    
T  2620110 caccactaatcatttgagaaaatcacataattaagtgtaa--ctatgtgttggtgt 2620057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3618883 - 3618923
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| ||||||||||||||||||| |||||||||| |||||    
T  3618883 caccgctaataatttgagaaaattccataattcagcgtaat 3618923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14618783 - 14618831
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    |||| |||||||||| ||||||  ||||||||||||||||| |||||||    
T  14618783 cacccctaataatttaagaaaaccacataattcagtgtaataatatgtg 14618831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14840348 - 14840308
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||| ||||||||| ||||||| |||||||||||||||||    
T  14840348 caccattaataatttcagaaaatcacataattcagtgtaat 14840308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17568740 - 17568700
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||| |||||||||||||||||||||||||| | ||||||    
T  17568740 caccattaataatttgagaaaattacataatttaatgtaat 17568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 23272042 - 23271994
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    |||||||||||| | |||||||| | ||||||||||||||| |||||||    
T  23272042 taatttgagaaactgacataattgaatgtaatcatatgtgtcggtgttg 23271994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24633768 - 24633800
Alignment:
Q  1 caccactaataatttgagaaaattacataattc 33  Q
    ||||||||||||||||||||||| |||||||||    
T  24633768 caccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 29386552 - 29386508
Alignment:
Q  17 agaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    |||||| | ||||||||||||||||||||||||| ||||| ||||    
T  29386552 agaaaactgcataattcagtgtaatcatatgtgtcggtgtcgtgt 29386508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 34910323 - 34910359
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  34910323 actaataatttgaaaaaatcacataattcagtgtaat 34910359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 49651838 - 49651778
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggac 66  Q
    |||||||||||| ||||| |||||||||| |||||| | | |||| ||||| |||||||||    
T  49651838 ctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15410505 - 15410443
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||| |||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  15410505 caccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgttgtgtcg 15410443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 38749614 - 38749554
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcggaca 38749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 43001807 - 43001879
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtc 78  Q
    |||||||||||| ||||||||||||||||||||||| | | ||||||||| ||||||||||| ||||| ||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtcggacacgacacgtgtc 43001879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 6471941 - 6471878
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatg 69  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||| |||||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgtgggacatg 6471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 39205887 - 39205970
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||||||||| | ||||||  ||||||| |||||||||||||| ||||| |||| ||||| || ||||||||||||    
T  39205887 ctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtccgacacgacacgtgcccgacaccggga 39205970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 30502445 - 30502362
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||| |||||||||||||||||| || |||||||||||||| |||||||| |     |||||||||| |||||||||||||||| ||||    
T  30502445 caccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacactggga 30502362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 30542788 - 30542705
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||| |||||||||||||||||| || |||||||||||||| |||||||| |     |||||||||| |||||||||||||||| ||||    
T  30542788 caccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacactggga 30542705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36838545 - 36838605
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||    
T  36838545 caccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 19737533 - 19737483
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 57  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  19737533 taataatttgagaaaattacataattcaatgcaatcatatgtgtcggtgtt 19737483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 2548395 - 2548444
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  2548395 taataattagagaaaattacataattcagtgtaatcataagtgtcggtgt 2548444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3966505 - 3966566
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||| |||||||||||||||||| ||| ||||||||||||| |||||||| ||||| |||||    
T  3966505 caccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtc 3966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 28296336 - 28296385
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  28296336 taataatttgagaaaatgacataattcaatgtactcatatgtgttggtgt 28296385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 17593774 - 17593718
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||||||||||||||||| || |||||||||||||| |||| |||||||| ||||||    
T  17593774 ctaataatttgagaaaatcacgtaattcagtgtaattatatatgttggtggtgtgtc 17593718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 23016040 - 23015964
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgaca 83  Q
    |||| |||||||||||| ||||||||||||||||| ||| |||| | |||||| ||||||| ||||  |||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgaca 23015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27932237 - 27932277
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  27932237 caccgctaataatttgagaaaattacataattcagtgtaat 27932277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 31084330 - 31084413
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||| ||||| |||||||||| |||||| | | |||| | ||| |||||||||| ||||| |||||||||| ||||    
T  31084330 ctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactggga 31084413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 31264446 - 31264489
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgt 31264489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19293480 - 19293430
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgtt 51  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  19293480 caccaataataatttaagaaaataacataattaagtgtaatcatatgtgtt 19293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38806905 - 38806839
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||| |||||||||||||| || |||| ||||| ||||| ||||||||| |||| |||||||||||    
T  38806905 caccaataataatttgagaatatgacatgattcaatgtaagcatatgtgtcggtgctgtgtcggaca 38806839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 2419865 - 2419902
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcat 44  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  2419865 taataatttgagaaaattacacaattcagtgtaatcat 2419902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 2577231 - 2577190
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  2577231 taataatttgagaaaatgacataatttagtgtaatcatatgt 2577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12264886 - 12264837
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  12264886 caccgctaattatttgagaaaattacatgattcagtgtaattatatgtgt 12264837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23220985 - 23221042
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    |||| |||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||    
T  23220985 caccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcggtgttg 23221042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 28588725 - 28588676
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||| |||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 28588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 35017040 - 35017085
Alignment:
Q  2 accactaataatttgagaaaattacataattcagtgtaatcatatg 47  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||    
T  35017040 accactaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 43208322 - 43208265
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||||||||| |||||||||| ||||||||||| |||  |||||||||| ||||    
T  43208322 taatttgagaaaatgacataattcaatgtaatcatatctgtctgtgttgtgtcagaca 43208265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 14873527 - 14873607
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||||  |||||||| |||||||| |||||||| |||||  ||||||||   |||| ||||| |||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccggga 14873607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 18421890 - 18421815
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||||| ||||||| ||||||||| |||||||| |     | |||||||| |||||||||||| ||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtgtcg-----gcgtcggacacgacacatgtccggcaccggga 18421815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 21194259 - 21194219
Alignment:
Q  4 cactaataatttgagaaaattacataattcagtgtaatcat 44  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  21194259 cactagtaatttgagaaaatcacataattcagtgtaatcat 21194219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 40211964 - 40212020
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||||| ||||||||||||||||||||| | ||||||||||| | ||||| ||||||    
T  40211964 taataaattgagaaaattacataattcaatataatcatatgtatcggtgtcgtgtcg 40212020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 41091309 - 41091265
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||    
T  41091309 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgt 41091265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 6326345 - 6326314
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||||||||||||||||||    
T  6326345 taatttgagaaaattacataattcagtgtaat 6326314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18592075 - 18592138
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| |||||| ||| |||||||||||||||||| |||||| |||||||  ||||| |||||||    
T  18592075 caccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcgg 18592138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 18607148 - 18607105
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||    
T  18607148 taataatttgagaaaataacataattcaatgtaatcataggtgt 18607105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 22423865 - 22423806
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||||||||| |||||||||| | |||| |||| ||| ||||| |||||||    
T  22423865 actaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcgg 22423806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 23012460 - 23012382
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||||||||| | |||||| | |||||| |||||||| ||||||     ||||| |||||||||| ||||||||||    
T  23012460 ctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgtt-----ggacacgacacatgtctgacaccggga 23012382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 24273078 - 24273039
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 24389136 - 24389175
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 32630786 - 32630743
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||    
T  32630786 taataatttgagaaaattatataattcaatgtaattatatgtgt 32630743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32767000 - 32766937
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| ||||||||||||||||||  || |||||| |||||| ||||||||| |||| |||||||    
T  32767000 caccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcgg 32766937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 16203847 - 16203797
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||||  ||||||| |||||||| |||||||| |||||    
T  16203847 ctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgt 16203797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 21194171 - 21194098
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggg 88  Q
    |||||||||||||| |||| |||||||||||| ||| || ||||||||     ||||| |||||||||| |||||||||    
T  21194171 taatttgagaaaatcacatcattcagtgtaattataggtattggtgtt-----ggacacgacacatgtcagacaccggg 21194098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 41600906 - 41600948
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    ||||||||||||||||||||| |||||| | ||||||||||||    
T  41600906 taataatttgagaaaattacacaattcaatataatcatatgtg 41600948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 4344750 - 4344787
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcat 44  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  4344750 taataatttgaaaaaatgacataattcagtgtaatcat 4344787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 11596506 - 11596469
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcat 44  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  11596506 taataatttgagaaaatgacataattcaatgtaatcat 11596469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19168878 - 19168829
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| ||| |||||||| ||||| |||| |||||||||||||||||||||    
T  19168878 caccgctattaatttgataaaatcacattattcagtgtaatcatatgtgt 19168829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 26205805 - 26205768
Alignment:
Q  13 tttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  26205805 tttgagaaaatgacataattcagtgtaatcataggtgt 26205768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27144465 - 27144514
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| ||||||||||||| |||| |||||||| |||||||| ||||||||    
T  27144465 caccgctaataatttgaggaaatcacataatttagtgtaattatatgtgt 27144514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34879352 - 34879401
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||| ||||||||||||| | ||||||||||||||| ||||||||    
T  34879352 caccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgt 34879401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 19438353 - 19438385
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||| |||||||||||||||||    
T  19438353 ataatttgagaaaatcacataattcagtgtaat 19438385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19746749 - 19746717
Alignment:
Q  1 caccactaataatttgagaaaattacataattc 33  Q
    |||| ||||||||||||||||||||||||||||    
T  19746749 caccgctaataatttgagaaaattacataattc 19746717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 41558701 - 41558645
Alignment:
Q  11 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||||| |||||||||| |||||| | ||||||  |||| ||||||||||    
T  41558701 aatttgagaaaatgacataattcaatgtaattaaatgtgtcagtgtcgtgtcggaca 41558645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7658465 - 7658522
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  7658465 caccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgttg 7658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 11803267 - 11803321
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgt 11803321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 3508060 - 3508108
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtg 55  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  3508060 taataatttgagaaaataacataattcaatgtaatcatatgtgttggtg 3508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 12559158 - 12559074
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca-tgacacatgtccgacaccggga 89  Q
    |||||||||||||||||| | |||||||||||||||||||||| |||||||  | |||||||  ||||| ||||||||| |||||    
T  12559158 ctaataatttgagaaaatgatataattcagtgtaatcatatgtattggtgtcatctcggacaccgacacgtgtccgacaacggga 12559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4611536 - 4611599
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||| | |||| ||||||||    
T  4611536 caccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtcgg 4611599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 13203646 - 13203688
Alignment:
Q  4 cactaataatttgagaaaattacataattcagtgtaatcatat 46  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  13203646 cactaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34897087 - 34897136
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  34897087 caccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 34897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4786395 - 4786340
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| |||||||| |||||    
T  4786395 caccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 14134705 - 14134756
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||| |||||    
T  14134705 actaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18646174 - 18646229
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||| ||||||||||| ||||| |||| ||||||||||||||||| |||||||||    
T  18646174 caccagtaataatttgaaaaaatgacatgattcagtgtaatcatatatgttggtgt 18646229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22493496 - 22493555
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtg 60  Q
    ||||||| ||||||| | ||||| |||||||||||||||||||||| ||| |||||||||    
T  22493496 caccactgataattttaaaaaatcacataattcagtgtaatcatatatgtcggtgttgtg 22493555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37225800 - 37225753
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  37225800 caccaataataatttgagaaaataacataattcaatgtaatcatatgt 37225753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7442847 - 7442905
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgt 59  Q
    |||| |||||||||| | ||||||||||||||||||||||| | | |||||||||||||    
T  7442847 caccgctaataatttcataaaattacataattcagtgtaattacaagtgttggtgttgt 7442905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 11927137 - 11927083
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||| ||||| ||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 13844648 - 13844598
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||| |||||||| |||||||| |||||||| |||||    
T  13844648 ctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgt 13844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 14513225 - 14513187
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcata 45  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  14513225 taataatttgagaaaattacataattcagcgtaatcata 14513187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14634198 - 14634136
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||| |||| ||||| ||||||||| ||||||||||||||| |||| ||||||||| ||||||    
T  14634198 caccgctaacaatttaagaaaattatataattcagtgtaattatatttgttggtgtcgtgtcg 14634136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 12985400 - 12985449
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||| |||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgt 12985449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24362259 - 24362210
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||| ||| ||||||||||||||||| ||||||||    
T  24362259 caccgctaataatttgagagaatcacataattcagtgtaattatatgtgt 24362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 31236629 - 31236580
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtg 55  Q
    |||||||||||||||||| |||||||||| |||||| |||||||| ||||    
T  31236629 ctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 3025558 - 3025602
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgt 3025602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 14731719 - 14731763
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||    
T  14731719 ctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 29198530 - 29198490
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatg 47  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  29198530 taataatttgagaaaatgacataattcaatgtaatcatatg 29198490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39954336 - 39954288
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    |||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  39954336 caccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40063953 - 40063997
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcata 45  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||    
T  40063953 caccaataataatttgagaaaatgacataattcattgtaatcata 40063997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 4122300 - 4122245
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||||||| || ||||||| |||||||| |||||| |||||||| |||||||||||    
T  4122300 taataattagataaaattatataattcattgtaattatatgtgtcggtgttgtgtc 4122245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20679452 - 20679397
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| ||||| ||||||||||| ||| |||| |||||    
T  20679452 cacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgt 20679397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 28883929 - 28883886
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||    
T  28883929 taataatttgagaaaatgacataattcagtggaatcataggtgt 28883886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 11944673 - 11944727
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||| ||||| |||||| |||||||||| |||||||| ||||| ||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 12606881 - 12606831
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||| | |||||||| |||||| |||||||| |||||    
T  12606881 ctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgt 12606831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 24669441 - 24669475
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||| ||||||||||||||||||||||    
T  24669441 taataatttgaggaaattacataattcagtgtaat 24669475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 33389410 - 33389356
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    ||||| ||||||||  |||||||| ||| ||||||||||||||||||| ||||||    
T  33389410 ataatatgagaaaagaacataattaagtataatcatatgtgttggtgtcgtgtcg 33389356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 33405435 - 33405362
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 85  Q
    ||||||||||||||||  |||||||| |||||||| |||||||| |     |||||||||| |||||||||| ||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtctgacacc 33405362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18067991 - 18067954
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgt 38  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  18067991 caccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 28819199 - 28819256
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||||||||||  ||||| ||| || |||||||||||| ||| |||||||||    
T  28819199 taataatttgagaaaatggcataactcaatgcaatcatatgtgtcggttttgtgtcgg 28819256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 33382070 - 33382021
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||| ||||||| ||||||||||| ||||| |||||||| |||||    
T  33382070 taataatttaagaaaatgacataattcagagtaattatatgtgtcggtgt 33382021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 34201097 - 34201056
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    ||||||||||||||||| |||||||||| |||||| ||||||    
T  34201097 taataatttgagaaaatgacataattcaatgtaattatatgt 34201056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 40332200 - 40332233
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||| |||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaat 40332233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 4948658 - 4948694
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  4948658 actaataatttgaaaaaatcacataattcagtgtaat 4948694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 15816182 - 15816126
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||||| ||||| |||||||| |||||||| ||| |||| ||||| ||||    
T  15816182 actaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 16642027 - 16641943
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||||||||   |||||||| |||||  | |||||||| ||||| |||||||||| ||||  ||||  |||||||||    
T  16642027 actaataatttgagaaatacacataatttagtgtcgttatatgtgtcggtgtcgtgtcggacacgacatgtgtctaacaccggga 16641943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 25172750 - 25172694
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||||||||||| ||||||||||| || | |||||| |||||||| ||||| |||||    
T  25172750 ctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtc 25172694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 26418390 - 26418350
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||| | || |||||||||||||||||||||    
T  26418390 taatttgagaaaatcatattattcagtgtaatcatatgtgt 26418350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27067355 - 27067323
Alignment:
Q  1 caccactaataatttgagaaaattacataattc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  27067355 caccactaatgatttgagaaaattacataattc 27067323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36934672 - 36934724
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttgg 53  Q
    |||| ||||||||| || ||||| |||||||||| |||||| |||||||||||    
T  36934672 caccgctaataattcgaaaaaatcacataattcattgtaattatatgtgttgg 36934724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37283867 - 37283827
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| |||||||| ||||||||| |||||||||||||||||    
T  37283867 caccgctaataatctgagaaaatcacataattcagtgtaat 37283827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36635326 - 36635415
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt-tgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||  ||||| |||| |||||  ||| ||||||||||    
T  36635326 caccactaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacgcgtcagacaccggga 36635415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 18513292 - 18513232
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||    
T  18513292 taataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgtcggaca 18513232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 46180986 - 46180941
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgttgg 53  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  46180986 aataatttgagaaaataacataattcagtgtaatcatatgtgttgg 46180941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 15659812 - 15659752
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggac 66  Q
    ||||||||||||||||||  |||||||| ||||||| |||||||||||||| |||||||||    
T  15659812 ctaataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtcggac 15659752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 7012074 - 7012131
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||||||| |||||||||||||| |||||| || | |||||||||||||    
T  7012074 taataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcgg 7012131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 20743329 - 20743284
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttg 52  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  20743329 taataatttgagaaaatgacataattcagtgtaatcataggtgttg 20743284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 40783965 - 40784014
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  40783965 taataatttgagataataacataattcagcgtaatcatatgtgttggtgt 40784014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 21945510 - 21945585
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccg 86  Q
    |||||||||||| ||||| ||||||||||||||||| | | |||| |||||     |||||||||||||||||||||||||    
T  21945510 ctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt-----cggacatgacacatgtccgacaccg 21945585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 3947818 - 3947739
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 85  Q
    |||||||||||| |||||  |||||||||||||||| | | ||||  |||| |||||||||| ||||| |||||||||||    
T  3947818 ctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtccgacacc 3947739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5775415 - 5775360
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||| ||||||||||||||||| |||||||| |||||||| |||||||| |||||    
T  5775415 caccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 18576086 - 18576039
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtgttggtgt 18576039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 24343515 - 24343558
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||    
T  24343515 taataatttgagaaaattacataattcagtgtaattataggtgt 24343558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 29205451 - 29205529
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||| ||||| ||||||||||||||||| | | |||| ||||||     ||||| |||||||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtt-----ggacacgacacatgtccgacaccggga 29205529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 31243599 - 31243556
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  31243599 taataatttgagaaaatgacataattcagtgtaatcataggtgt 31243556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 43300022 - 43299983
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatat 46  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  43300022 taataatttgagaaaattacataattcaatgtaatcatat 43299983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 43300624 - 43300663
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatat 46  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  43300624 taataatttgagaaaattacataattcaatgtaatcatat 43300663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 15029772 - 15029822
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| || || ||||||||||||||||| ||||||||||||||    
T  15029772 ctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgt 15029822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 22440651 - 22440609
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 33950143 - 33950193
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||| |||||||| | ||||||||||||||| |||||    
T  33950143 ctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgt 33950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 903930 - 903971
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40613452 - 40613501
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||| ||||||||||| ||||||||||||||||| ||||||||    
T  40613452 caccgctaatattttgagaaaatcacataattcagtgtaattatatgtgt 40613501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 55941060 - 55941011
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||| ||||||||| |||||||||||||||| ||| |||||||||||||    
T  55941060 caccaataataatttaagaaaattacataatttagtataatcatatgtgt 55941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8423775 - 8423735
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  8423775 caccgctaataatttgagaaaatcacataattcagtgtaat 8423735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 30103406 - 30103359
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  30103406 aataatttgagaaaatcacataatt-agtgtaatcatatgtgtcggtgt 30103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatat 46  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 5654642 - 5654599
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||    
T  5654642 taataatttgagaaaatgacataattcaatgtaatcatacgtgt 5654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7214579 - 7214524
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||||||||| |||||||| | |||||| ||||| || |||||    
T  7214579 caccactaataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgt 7214524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 14465345 - 14465302
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| |||||||||| | |||||||||||||    
T  14465345 taataatttgagaaaatgacataattcaatttaatcatatgtgt 14465302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17446073 - 17446116
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcat 44  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||    
T  17446073 caccactaataatttaagaaaatcacataatttagtgtaatcat 17446116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30982935 - 30982872
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| ||||| |||||||||||| ||||| ||||||||||| ||| |||| ||||| |||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 37496718 - 37496800
Alignment:
Q  13 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt------cggacatgacacatgtccgacaccggga 89  Q
    ||||||||||| |||||||||| |||||||| | |||| ||||||||||      |||||| |||||||||| ||||||||||    
T  37496718 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgttgtgtcgttgccggacacgacacatgtcggacaccggga 37496800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 54580076 - 54580025
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||| ||||| ||||||||||||||||| ||| |||| |||||    
T  54580076 actaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 4672137 - 4672087
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||| ||||||||||||||||||||||   |||||||| |||||    
T  4672137 ctaataatttgggaaaattacataattcagtgtagctatatgtgtcggtgt 4672087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 10546156 - 10546194
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcata 45  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  10546156 taataatttgagaaaatgacataattcaatgtaatcata 10546194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 11110212 - 11110254
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||||| |||||||||  |||||||||||||||    
T  11110212 aataatttgagaaaatgacataattcgatgtaatcatatgtgt 11110254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 15835690 - 15835640
Alignment:
Q  7 taataatttgagaaaa-ttacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||| |||| ||| ||||||| ||||||||||||||||||||||    
T  15835690 taataatttgaaaaaaattatataattccgtgtaatcatatgtgttggtgt 15835640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16189711 - 16189765
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtg 55  Q
    |||| |||| ||||||||||||| ||||||||||||||||| || ||||| ||||    
T  16189711 caccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 32910559 - 32910593
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||| |||||||||||||||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaat 32910593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 36386267 - 36386213
Alignment:
Q  2 accactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| ||||||||||||||||  ||||||||||||||||| | | ||||||||||    
T  36386267 accaataataatttgagaaaaggacataattcagtgtaattaaaggtgttggtgt 36386213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 51701265 - 51701323
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||||| |||||||||||||| |||||||| | | ||||| |||| |||||||    
T  51701265 ctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcgg 51701323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6933277 - 6933326
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||| | |||||||  ||||||||||| |||||||||||||    
T  6933277 caccactaataatgtaagaaaatctcataattcagtttaatcatatgtgt 6933326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22597037 - 22596988
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||| |||||||||||||||||| |||||||||  ||||||| ||||||    
T  22597037 caccaataataatttgagaaaattgcataattcaacgtaatcacatgtgt 22596988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 46160912 - 46160961
Alignment:
Q  15 tgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||| |||||||||||||| || |||||||| ||||| |||||||    
T  46160912 tgagaaaataacataattcagtgttattatatgtgtcggtgtcgtgtcgg 46160961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 56488567 - 56488518
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||| ||||||||||||| | ||||||||| ||||||||||||||    
T  56488567 caccgctaacaatttgagaaaatcatataattcagggtaatcatatgtgt 56488518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 847958 - 847986
Alignment:
Q  6 ctaataatttgagaaaattacataattca 34  Q
    |||||||||||||||||||||||||||||    
T  847958 ctaataatttgagaaaattacataattca 847986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 7970535 - 7970587
Alignment:
Q  15 tgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||| | ||||||||||||||| |||||| ||||||| ||||| ||||    
T  7970535 tgagaaaatcatataattcagtgtaattatatgttttggtgtcgtgtcagaca 7970587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 9906782 - 9906842
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||| |||||||| |  ||||| | ||||||||||| ||||||| ||||||||||||    
T  9906782 taataattagagaaaataaattaattgaatgtaatcatatatgttggttttgtgtcggaca 9906842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 9996849 - 9996889
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    |||||||||||||||| |||||||||||| |||| ||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgt 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 11596404 - 11596348
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||||||||||| ||||| ||||||||||||||||| | | |||| ||||| |||||    
T  11596404 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 11596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30522972 - 30522920
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttgg 53  Q
    |||| ||||| |||||||||||| ||||||||||||||||  |||| ||||||    
T  30522972 caccgctaattatttgagaaaatcacataattcagtgtaactatatatgttgg 30522920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38148782 - 38148742
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| |||||| ||||||||||| |||||||||||||||||    
T  38148782 caccgctaatagtttgagaaaatcacataattcagtgtaat 38148742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40179693 - 40179614
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 85  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| ||||| || |     |||||||||| ||||||||| |||||||    
T  40179693 caccattaatagtttgaaaaaatcacataattcagtgtaattatatgcgtcg-----gtgtcggacacgacacatgttcgacacc 40179614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 49659573 - 49659525
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||| | |||||| |||||||||||| || |||||||    
T  49659573 aataatttgagaaaatgatataatttagtgtaatcataggttttggtgt 49659525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 5409888 - 5409805
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||| ||||| ||||||||||||| ||| | | |||| ||||| |||||||||| ||||| |||||||||||||||    
T  5409888 ctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccggga 5409805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 17307904 - 17307958
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtcgg 17307958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4909153 - 4909202
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  4909153 caccaataataatttgagaaaattacataattcattgtaatcatatgtgt 4909202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27945043 - 27945104
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||| ||||| |||||    
T  27945043 caccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 5233637 - 5233697
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||||||||| |||||||  |||||||| |||||||||||||||||||| ||||    
T  5233637 taataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtccgaca 5233697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23128718 - 23128658
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||| ||||||||||||||||  | |||||||||||||||||||||||| ||||||||||    
T  23128718 caccaataataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgt 23128658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 36314678 - 36314626
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgt 59  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  36314678 taataatttgagaaaatgacatatttcaatgtaatcatatgtgttggtgttgt 36314626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5835249 - 5835304
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||    
T  5835249 caccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgt 5835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8160418 - 8160481
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| |||||||||| |||||||||||||||| |||||||| |||||||||||| | |||||||    
T  8160418 caccgctaataatttaagaaaattacataatttagtgtaattatatgtgttggtatcgtgtcgg 8160481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15902824 - 15902887
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||| ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||||||    
T  15902824 caccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcgg 15902887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 21880159 - 21880233
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 85  Q
    |||||||||||||||||||||||||||||||||||| | | |||| |     |||||||||| |||||||||||||||||    
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcg-----gtgtcggacacgacacatgtccgacacc 21880233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 1433462 - 1433540
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 85  Q
    ||||||||||||||||| |||| |||  ||||||| |||||||| ||||| |||||||||| ||||  |||||||||||    
T  1433462 taataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacacc 1433540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7758324 - 7758390
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||||||| ||||||||| |||||||||| |||| || ||||| ||||| ||||||||||    
T  7758324 caccactaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgtcggaca 7758390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 44172941 - 44172887
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||    
T  44172941 taataatttgagaaaatgacataattcaatgtaatcacatgtgtttgtgttgtgt 44172887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 7328743 - 7328686
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||||||    
T  7328743 ctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 13770698 - 13770779
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccgg 87  Q
    |||||||||| | ||||||||||||||||||||||| | | |||| | ||| ||||||||||  |||| |||||||||||||    
T  13770698 ctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacacaacacgtgtccgacaccgg 13770779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22868044 - 22868093
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  22868044 caccactaataatatgagaaaatcacataattcagtgtaattatatgtgt 22868093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 9778510 - 9778590
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||| ||||| |||||||||||| |||| | | |||| ||||| ||||||||||  |||| |||||||||||||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccggga 9778590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 16341504 - 16341564
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||||||||| |||||||| |||||||| |||||||  ||||| ||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcggaca 16341564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29787426 - 29787373
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  29787426 caccgctaataatttgagaaaatcacataattcagtgtaat--tatgtgttggtgt 29787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 32094074 - 32093990
Alignment:
Q  5 actaataatttgagaaaatt-acataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggg 88  Q
    ||||||||||||| |||| | ||||||||||||||||| | |  ||| ||||| |||||||||| ||||| ||||||||||||||    
T  32094074 actaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacgacacgtgtccgacaccggg 32093990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32308122 - 32308213
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc------ggacatgacacatgtccgacaccg 86  Q
    |||| |||||||||||||||||| |||||||||||||||||  |||||||  |||| |||||      ||||| ||||||||||||||||||    
T  32308122 caccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccg 32308213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20549793 - 20549848
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| || |||||||||||||| |||||||| |||||    
T  20549793 caccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgt 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 21139044 - 21138969
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 85  Q
    |||||||||||||||||  ||||||| | |||||| |||||||| ||||| ||||||||||||| || |||||||||||    
T  21139044 taataatttgagaaaat--cataatt-actgtaattatatgtgtcggtgtcgtgtcggacatgatacgtgtccgacacc 21138969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 22602756 - 22602705
Alignment:
Q  12 atttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 63  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||| ||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 27732290 - 27732247
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgt 27732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 30813819 - 30813854
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  30813819 ctaataatttgagaaaattacataattcagtgtaat 30813854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 38134457 - 38134414
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||    
T  38134457 taataatttgagaaaatgacataattcaatgtaatcatatgtgt 38134414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 43027521 - 43027438
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||| ||||| ||||||| ||||||||  | | |||| ||||| ||||| |||| ||||| |||||||||||||||    
T  43027521 ctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccggga 43027438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 3142130 - 3142072
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||| ||||| |||| | |||||||| ||||||||||||||| |||||||||||||    
T  3142130 ctaataaattgagtaaatcatataattcaatgtaatcatatgtgtcggtgttgtgtcgg 3142072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 5548686 - 5548744
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||||||| | ||||||||||||||| ||||||||  |||| ||||||||||    
T  5548686 ataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcggaca 5548744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22484027 - 22484104
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgaca 83  Q
    |||| |||||||||| |||||||| ||||||||||| |||| |||||||| |     ||||| ||||||||||||||||||||    
T  22484027 caccgctaataattttagaaaattgcataattcagtataattatatgtgtcg-----gtgtcagacatgacacatgtccgaca 22484104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 23930230 - 23930272
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgttg 52  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  23930230 taatttgagaaaatgacataattcagtgtaatcataggtgttg 23930272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 31808560 - 31808502
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgga 65  Q
    ||||||||||||||||| ||| || ||| |||||||| |||||||||||| ||||||||    
T  31808560 taataatttgagaaaatgacacaagtcaatgtaatcacatgtgttggtgtcgtgtcgga 31808502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 35297723 - 35297669
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||||||||| |||||||||| | |||| |||||||||||||| ||||    
T  35297723 taataatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgt 35297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6630969 - 6630920
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||||||| | || |||||||||||||| ||||||||    
T  6630969 caccactaataatttgagaaagtcacttaattcagtgtaattatatgtgt 6630920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 18013127 - 18013082
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||    
T  18013127 actaataatttaaaaaaattacataattcagtgtaattatatgtgt 18013082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 21247787 - 21247738
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| || ||||||| ||||||||| |||||||||||    
T  21247787 taataatttgagaaaatgacgtaattcaatgtaatcatgtgtgttggtgt 21247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 7133327 - 7133291
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcata 45  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7133327 ataatttgagaaaatgacataattcagtgtaatcata 7133291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 17851438 - 17851482
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||    
T  17851438 ctaataattttagaaaatcacataattcagtgtaattatatgtgt 17851482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28155572 - 28155612
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  28155572 caccgctaataatttgagaaaattacataattcggtgtaat 28155612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32287520 - 32287437
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||| |||||||| ||||||||| ||||||||||||| ||  |||||||| |     |||||||||||||||  |||||||||||||||    
T  32287520 caccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcg-----gtgtcggacatgacaagtgtccgacaccggga 32287437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 33384633 - 33384573
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||| |||||||||   |||||| |||||||| |||||||||||||| ||||||||||    
T  33384633 taataatctgagaaaatcctataatttagtgtaattatatgtgttggtgtggtgtcggaca 33384573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 2424621 - 2424656
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  2424621 ctaataatttgagaaaatcacataattcagtgtaat 2424656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7546162 - 7546217
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||| ||||||||||| ||||| |||||||||| ||| |||||||| ||||||||    
T  7546162 caccagtaataatttgacaaaatgacataattcaatgtgatcatatgggttggtgt 7546217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 9482944 - 9482991
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||| ||| ||||||||||||| |||||||| |||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 9482991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10042939 - 10043029
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt--cggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||||||| ||| | |||||||| || ||||| ||| ||||  |||| ||||  |||| | |||||||||||||||||||||    
T  10042939 caccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcgtgtaccggatacgacacatgtccgacaccggga 10043029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 12278843 - 12278886
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtgt 12278886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19206052 - 19206107
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| |||||||||| | |||| |||||||| |||||    
T  19206052 caccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 44020983 - 44021034
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||||||||| |||||||||||||||| ||||| ||||| ||| |||||||    
T  44020983 taataatttgaaaaaattacataattcaatgtaaccatatctgtcggtgttg 44021034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 3721100 - 3721150
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||| |||||    
T  3721100 ctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgt 3721150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 19992008 - 19992058
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||||||||| ||||| ||||||||||| ||| |||| |||||    
T  19992008 ctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgt 19992058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 24289829 - 24289859
Alignment:
Q  8 aataatttgagaaaattacataattcagtgt 38  Q
    |||||||||||||||||||||||||||||||    
T  24289829 aataatttgagaaaattacataattcagtgt 24289859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 24339649 - 24339707
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||||| ||||| ||||||||||||||||| | | |||| ||||| |||||||    
T  24339649 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 24339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 25481909 - 25481959
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| ||||| ||||||||||||||||| | | ||||||||||    
T  25481909 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgt 25481959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 2525895 - 2525846
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| |||| |||||||||| | ||||||||||||| |||||    
T  2525895 taataatttgagcaaatgacataattcaatataatcatatgtgtcggtgt 2525846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 26329433 - 26329376
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| || || |||||||    
T  26329433 taataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcgg 26329376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 30731046 - 30731079
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||| |||||||||||||||||    
T  30731046 aataatttgagaaaatcacataattcagtgtaat 30731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 38143231 - 38143280
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||| ||||| |||||||| | |||||| ||||||||||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgt 38143280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46644744 - 46644687
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||| ||||||||||| ||||||| |||||| ||||||||||| | ||||| |||||    
T  46644744 caccaataataatttgaaaaaattatataatttagtgtaatcatctatgttgttgttg 46644687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 11890970 - 11890910
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||| ||||| | ||||||||||||||| ||  |||| ||||| ||||||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcgtgtcggaca 11890910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 18233646 - 18233606
Alignment:
Q  10 taatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||||||||||| ||||||||||||||||| ||| ||||    
T  18233646 taatttgagaaaatgacataattcagtgtaattataggtgt 18233606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23191898 - 23191938
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| |||||||||||||||||| ||||| |||||||||||    
T  23191898 caccgctaataatttgagaaaatcacatatttcagtgtaat 23191938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 38629965 - 38630009
Alignment:
Q  13 tttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 57  Q
    ||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  38629965 tttgagaaaatgacataattctgtgtaataatatgtgtaggtgtt 38630009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 9802 - 9744
Alignment:
Q  3 ccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||| ||||| ||||    
T  9802 ccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgt 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 18889643 - 18889593
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  18889643 ctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgt 18889593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 5367197 - 5367277
Alignment:
Q  4 cactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||||| |     |||||||||| ||||||| |||||| ||||||    
T  5367197 cactaataatttgaggaaatcacataattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatatccgactccggga 5367277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21616764 - 21616813
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  21616764 caccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2665945 - 2665884
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||||| ||||||| |||||||| |||||||| |||||||  |||||||||||||    
T  2665945 caccactaataattttagaaaatcacataatttagtgtaattatatgtg--ggtgttgtgtcgg 2665884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 30527646 - 30527570
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgaca 83  Q
    ||||||||||||||||| | |||||| |||||||| |||||||| ||| | |||||| |||||| |||||| |||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgtcggtatcgtgtcgcacatgagacatgttcgaca 30527570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44860322 - 44860382
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||||||| ||||| ||||    
T  44860322 caccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 10535810 - 10535767
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  10535810 taataatttgagaaaatgacataattcagtgtaatcataagtgt 10535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 12668476 - 12668417
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||| ||||| ||||||||||||||||| ||| |||| ||||| |||||||    
T  12668476 actaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcgg 12668417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 18570980 - 18571023
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| |||||||||| |||||||||||||||    
T  18570980 taataatttgagaaaatgacataattcaatgtaatcatatgtgt 18571023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42832333 - 42832278
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||| |||| |||||    
T  42832333 caccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgt 42832278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23718028 - 23718082
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtg 55  Q
    |||| |||||||||||||||| | ||||||||||||||||| |||||||| ||||    
T  23718028 caccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 23921261 - 23921295
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||||||||||||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaat 23921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24105700 - 24105754
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtg 55  Q
    |||| |||||||||||||||| | ||||||||||||||||| |||||||| ||||    
T  24105700 caccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 2415325 - 2415374
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||||| |||||| |||||||  ||||||||||||||    
T  2415325 taataatttgagaaaattatataattaagtgtaactatatgtgttggtgt 2415374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4229465 - 4229416
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||| ||||||||| ||| ||| ||||||||||||||||||||||||||    
T  4229465 caccaataataatttaagagaatgacataattcagtgtaatcatatgtgt 4229416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 12748692 - 12748737
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttg 52  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  12748692 taataatttgagaaaatgacatagttcagtgtaatcataggtgttg 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 18622612 - 18622669
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    ||||||||||| | ||||| ||||||||||||||||| ||| |||||||||| |||||    
T  18622612 actaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29970606 - 29970557
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||||    
T  29970606 caccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgt 29970557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 34007042 - 34006993
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||| | ||||||||||||||||||||| |||| |||||    
T  34007042 taataatttgagaaattgacataattcagtgtaatcataggtgtcggtgt 34006993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 36281693 - 36281734
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37411301 - 37411252
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||||||||||| |||||||||||||| || ||||||||    
T  37411301 caccgctaataatttgagaaaatcacataattcagtgtgattatatgtgt 37411252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 40361805 - 40361756
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||| |||||||||||||| |||||||| |||| |||||||||    
T  40361805 taataatttgaaaaaattacataatttagtgtaattatatctgttggtgt 40361756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 41843462 - 41843531
Alignment:
Q  20 aaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||| ||||||||| || |||| |||||||| |||||||||||||||  ||||| |||||||||| ||||    
T  41843462 aaatcacataattcggtataattatatgtgtcggtgttgtgtcggacgcgacacgtgtccgacacgggga 41843531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 15909677 - 15909641
Alignment:
Q  13 tttgagaaaattacataattcagtgtaatcatatgtg 49  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtg 15909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 18420486 - 18420430
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||||||||||||||||| |||||||||| || ||| ||| |||| |||||||||||    
T  18420486 ctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtc 18420430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 18841066 - 18840987
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 89  Q
    ||||||||||||| |||||||||||||| |||||||| | | |||| |     ||||| |||| |||||||||||||||||||||    
T  18841066 actaataatttgaaaaaattacataattaagtgtaattacaagtgtcg-----gtgtcagacacgacacatgtccgacaccggga 18840987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 19613664 - 19613620
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgtt 51  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||    
T  19613664 taataatttgagaaaataacataattcaatgtaatgatatgtgtt 19613620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25846743 - 25846783
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  25846743 caccactaataatttgagaaaatcacatgattcagtgtaat 25846783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28121606 - 28121550
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 57  Q
    ||||| |||||||||||||||||  ||||| ||| |||||| |||||||||||||||    
T  28121606 caccattaataatttgagaaaatggcataaatcaatgtaattatatgtgttggtgtt 28121550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39323266 - 39323306
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  39323266 caccgctaataatttgacaaaattacataattcagtgtaat 39323306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 17520119 - 17520080
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  17520119 ataatttaagaaaatcacataattcagtgtaatcatatgt 17520080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18276523 - 18276578
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||| |||||||||||||||||| || |||||||||||||| || ||||| |||||    
T  18276523 caccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgt 18276578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 21374751 - 21374716
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||| |||||||||||||||||||||||    
T  21374751 ctaataatttgaaaaaattacataattcagtgtaat 21374716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 21782870 - 21782835
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaat 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  21782870 ctaataatttgagaaaatcacataattcagtgtaat 21782835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 24011044 - 24011087
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||    
T  24011044 taataatttgagaaaatgacataatttagtgtaatcataggtgt 24011087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 25544489 - 25544532
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||    
T  25544489 taataatttgagaaaatgatataattcagtgtaatcataggtgt 25544532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28677911 - 28677958
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgt 48  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||||||    
T  28677911 caccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 35449521 - 35449564
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||||||||||| ||| ||||||||||||| ||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtgt 35449564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 39279683 - 39279734
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||||| ||||||||| | ||||||||||||||| |||||||| |||||||    
T  39279683 taataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgttg 39279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 44776608 - 44776667
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||  |||||| |||||| ||||||||||||||| ||| ||||| ||||||||||    
T  44776608 aataatttatgaaaatgacataactcagtgtaatcatatatgtcggtgtcgtgtcggaca 44776667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2331796 - 2331834
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgta 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  2331796 caccattaataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 34691857 - 34691807
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| ||||| | ||||||||||||||| |||||||| |||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 34714269 - 34714219
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| ||||| | ||||||||||||||| |||||||| |||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34714219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 44605190 - 44605140
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 57  Q
    ||||||||||||||||| |||||||||| |||||| | |||||| ||||||    
T  44605190 taataatttgagaaaataacataattcaatgtaattacatgtgtcggtgtt 44605140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 8300264 - 8300219
Alignment:
Q  13 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 58  Q
    ||||||||||| |||||||| |||||||||||| |||| |||||||    
T  8300264 tttgagaaaatgacataatttagtgtaatcataagtgtcggtgttg 8300219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 11308053 - 11308012
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||    
T  11308053 ataatttgaaaaaatgacataattcagtgtaatcataggtgt 11308012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 22085012 - 22085061
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||| ||||||| |||||||| ||||||||||| ||||| |||||    
T  22085012 taataatttaagaaaatgacataatttagtgtaatcatttgtgtcggtgt 22085061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 31026703 - 31026752
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||| |||||    
T  31026703 taataatttaagaaaatgacataattcaatgtaatcatatatgtcggtgt 31026752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31808079 - 31808128
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||| |||||||||| | ||||| ||||||||||||||||| ||||||||    
T  31808079 caccgctaataatttaacaaaatcacataattcagtgtaattatatgtgt 31808128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 45000893 - 45000848
Alignment:
Q  11 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||| ||| |||||| ||||||||||||||| |||||    
T  45000893 aatttgagaaaatgacacaattcaatgtaatcatatgtgtcggtgt 45000848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 896218 - 896262
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgt 50  Q
    |||||| ||||||||||| ||||| |||| |||||||||||||||    
T  896218 ctaatagtttgagaaaatcacatatttcaatgtaatcatatgtgt 896262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 36756397 - 36756341
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 61  Q
    |||||||||||||  |||| ||||||||||||||||| ||| |||| ||||| ||||    
T  36756397 actaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 38355933 - 38355889
Alignment:
Q  12 atttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| |||||||||||||| || |||||||| |||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 38355889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 135364 - 135303
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||| ||||| ||||| ||||    
T  135364 ctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgaca 135303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 137789 - 137843
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    |||||||| ||||||| ||| ||||||||||| |||||||||||||||| |||||    
T  137789 aataatttaagaaaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtc 137843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 53189 - 53276
Alignment:
Q  8 aataatttgagaaaattacataattcagtgtaatcatatgtgttggtg------ttgtgtcggacatgacacatgtccgacaccggga 89  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| ||||        |||||||||||||||| |||||||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccggga 53276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 92809 - 92849
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaat 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  92809 caccgctaataatttgagaaaattacataattcagtgtaat 92849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1037 - 1100
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| |||||||||||| ||||||||||||||||||||||  ||||||||  |||| |||||||    
T  1037 caccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 44582 - 44519
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||| |||| ||||||||||||| ||||||||||||||||| |||||||| ||| | |||||||    
T  44582 caccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcgg 44519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 99901 - 99956
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 62  Q
    ||||||||| ||||||| |||||||||| |||||| |||||||||||||| |||||    
T  99901 taataattttagaaaataacataattcaatgtaattatatgtgttggtgtcgtgtc 99956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 90845 - 90890
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtgtaatcatat 46  Q
    ||||| ||||||||||||||||| | ||||||||||||||| ||||    
T  90845 caccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 18153 - 18099
Alignment:
Q  13 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 67  Q
    ||||||||||| |||||||||| |||||||  | |||||||||||||||||||||    
T  18153 tttgagaaaataacataattcaatgtaatcgcaagtgttggtgttgtgtcggaca 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 28858 - 28919
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacat 68  Q
    ||||||||| |||||||  ||||||||| |||||| |||||||| ||||||||||| |||||    
T  28858 taataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtcagacat 28919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 240072 - 240023
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    ||||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  240072 taataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgt 240023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 23440 - 23496
Alignment:
Q  19 aaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacat 75  Q
    ||||| ||||||||||||||||| ||| |||| ||||| |||||||||| |||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacat 23496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 63775 - 63811
Alignment:
Q  1 caccactaataatttgagaaaattacataattcagtg 37  Q
    |||| ||||||||||||||||||||||||||||||||    
T  63775 caccgctaataatttgagaaaattacataattcagtg 63811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 56932 - 56987
Alignment:
Q  9 ataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    ||||||||||||||| | ||||||||||||||||||| ||||  |||| |||||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcgtgtcgg 56987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 8104 - 8066
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcata 45  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  8104 taataatttgagaaaatgacataattcagtgtaaacata 8066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 6319 - 6369
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 56  Q
    |||||||||||| |||||| ||||||||| |||||| |||||||| |||||    
T  6319 ctaataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgt 6369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 17087 - 17037
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 57  Q
    |||||||||||||||||  ||||| ||| |||||| |||||||||||||||    
T  17087 taataatttgagaaaatggcataaatcaatgtaattatatgtgttggtgtt 17037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 70286 - 70359
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 85  Q
    ||||||||||| ||||| ||||||||||||||||| ||| |||| |     |||||||||| ||||| |||||||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcg-----gtgtcggacacgacacgtgtccgacacc 70359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 192300 - 192266
Alignment:
Q  7 taataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  192300 taataatttgagaaaattacataattcggtgtaat 192266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 263424 - 263366
Alignment:
Q  6 ctaataatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 64  Q
    |||||||||||||||||  ||||||||||||||||| ||| ||||  |||| |||||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcgg 263366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26395 - 26428
Alignment:
Q  1 caccactaataatttgagaaaattacataattca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  26395 caccactaataatttgagaaaatcacataattca 26428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 14536 - 14572
Alignment:
Q  5 actaataatttgagaaaattacataattcagtgtaat 41  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  14536 actaataatttgaaaaaatcacataattcagtgtaat 14572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 13406 - 13438
Alignment:
Q  5 actaataatttgagaaaattacataattcagtg 37  Q
    ||||||||||||||||||| |||||||||||||    
T  13406 actaataatttgagaaaatcacataattcagtg 13438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 21921 - 21889
Alignment:
Q  5 actaataatttgagaaaattacataattcagtg 37  Q
    ||||||||||||||||||| |||||||||||||    
T  21921 actaataatttgagaaaatcacataattcagtg 21889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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