View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3892_high_91 (Length: 264)
Name: NF3892_high_91
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3892_high_91 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 3 - 264
Target Start/End: Original strand, 46797645 - 46797906
Alignment:
| Q |
3 |
ggtttttatccgaaagaaaatgaagtttgaaaccgtacaaagagtgtaaaaggtaggtgagaggctgtaatagctgcttacctgtctcctctgtataaaa |
102 |
Q |
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| T |
46797645 |
ggtttttatccgaaagaaaatgaagtttgaaaccgtacaaagagtgtaaaaggtaggtgagaggctgtaatagctgcttacctgtctcctctgtataaaa |
46797744 |
T |
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| Q |
103 |
ctcaaccgcaaatataccaactcagtcagaaaaaattgcattttcatttttctgaaaaggctgaaattatagtacaaattggtaatacaaacttcaaact |
202 |
Q |
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| T |
46797745 |
ctcaaccgcaaatataccaactcagtcagaaaaaattgcattttcatttttctgaaaaggctgaaattatagtacaaattggtaatacaaacttcaaact |
46797844 |
T |
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| Q |
203 |
cggtgttctttttgaatgcgcgcccacataacttcatttcaatcccgaaaaaagctctttct |
264 |
Q |
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| T |
46797845 |
cggtgttctttttgaatgcgcgcccacataacttcatttcaatcccgaaaaaagctctttct |
46797906 |
T |
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