View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3892_low_12 (Length: 533)

Name: NF3892_low_12
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3892_low_12
NF3892_low_12
[»] chr2 (41 HSPs)
chr2 (154-522)||(41708158-41708527)
chr2 (158-522)||(15373616-15373981)
chr2 (159-441)||(40953-41234)
chr2 (160-498)||(42880563-42880902)
chr2 (159-498)||(42003244-42003582)
chr2 (160-498)||(37418521-37418860)
chr2 (160-397)||(11021533-11021770)
chr2 (159-397)||(28248029-28248267)
chr2 (160-319)||(33193-33352)
chr2 (160-249)||(41706539-41706628)
chr2 (159-249)||(15372498-15372588)
chr2 (168-249)||(39564-39645)
chr2 (323-406)||(35461-35544)
chr2 (160-251)||(29909693-29909784)
chr2 (183-251)||(37417296-37417364)
chr2 (160-275)||(17948903-17949018)
chr2 (197-251)||(15432365-15432419)
chr2 (160-233)||(361445-361518)
chr2 (196-249)||(14389139-14389192)
chr2 (159-251)||(42001609-42001701)
chr2 (160-251)||(39430-39521)
chr2 (312-403)||(11313003-11313094)
chr2 (291-366)||(38149900-38149975)
chr2 (456-498)||(35577-35619)
chr2 (197-251)||(25619697-25619751)
chr2 (196-249)||(16763112-16763165)
chr2 (196-249)||(16764611-16764664)
chr2 (196-273)||(24205634-24205711)
chr2 (196-249)||(24208097-24208150)
chr2 (200-249)||(40560263-40560312)
chr2 (160-251)||(92380-92470)
chr2 (291-326)||(363617-363652)
chr2 (443-489)||(363450-363496)
chr2 (196-249)||(6786036-6786089)
chr2 (196-249)||(14387385-14387438)
chr2 (196-249)||(19908301-19908354)
chr2 (444-489)||(28247939-28247984)
chr2 (196-273)||(37022161-37022238)
chr2 (196-249)||(39664803-39664856)
chr2 (200-268)||(7745255-7745323)
chr2 (168-252)||(11023045-11023128)
[»] chr7 (57 HSPs)
chr7 (159-522)||(8421415-8421779)
chr7 (160-522)||(35342425-35342789)
chr7 (161-522)||(36756611-36756973)
chr7 (161-522)||(3690151-3690513)
chr7 (161-522)||(36766135-36766497)
chr7 (165-522)||(36762408-36762766)
chr7 (162-522)||(46810707-46811068)
chr7 (159-498)||(46994659-46994999)
chr7 (165-498)||(47339781-47340114)
chr7 (160-495)||(33775408-33775743)
chr7 (158-406)||(23955130-23955378)
chr7 (160-397)||(30108565-30108802)
chr7 (160-397)||(45465038-45465275)
chr7 (160-406)||(38614637-38614883)
chr7 (160-498)||(40785301-40785639)
chr7 (160-406)||(2168679-2168925)
chr7 (197-403)||(33037730-33037937)
chr7 (158-321)||(4321036-4321199)
chr7 (160-249)||(8423316-8423405)
chr7 (160-249)||(35344325-35344414)
chr7 (158-251)||(47341719-47341812)
chr7 (223-406)||(34784957-34785140)
chr7 (280-366)||(4321204-4321290)
chr7 (155-251)||(38613514-38613610)
chr7 (159-251)||(46996735-46996827)
chr7 (291-406)||(34784170-34784285)
chr7 (456-498)||(23955055-23955097)
chr7 (159-249)||(33038832-33038922)
chr7 (154-252)||(45463664-45463762)
chr7 (183-251)||(2167502-2167570)
chr7 (160-251)||(46812615-46812706)
chr7 (456-498)||(2168606-2168648)
chr7 (160-251)||(27955370-27955461)
chr7 (160-251)||(38614944-38615035)
chr7 (196-249)||(13169683-13169736)
chr7 (196-273)||(20479695-20479772)
chr7 (196-249)||(27666100-27666153)
chr7 (443-504)||(34784300-34784361)
chr7 (196-249)||(35403619-35403672)
chr7 (203-251)||(23953848-23953896)
chr7 (202-273)||(11682823-11682894)
chr7 (199-249)||(24228444-24228494)
chr7 (456-498)||(38614581-38614623)
chr7 (196-249)||(56366-56419)
chr7 (196-249)||(29996549-29996602)
chr7 (444-489)||(30108847-30108892)
chr7 (196-249)||(30940460-30940513)
chr7 (160-273)||(34692726-34692839)
chr7 (196-249)||(35402005-35402058)
chr7 (196-249)||(38474178-38474231)
chr7 (196-249)||(39857681-39857734)
chr7 (196-249)||(39859264-39859317)
chr7 (456-504)||(1547417-1547465)
chr7 (168-252)||(4322604-4322688)
chr7 (202-278)||(13039613-13039689)
chr7 (456-504)||(19712035-19712083)
chr7 (160-212)||(34784067-34784119)
[»] chr4 (58 HSPs)
chr4 (157-519)||(44792931-44793294)
chr4 (160-522)||(47942474-47942837)
chr4 (160-522)||(10371057-10371419)
chr4 (160-522)||(10767677-10768041)
chr4 (160-522)||(35997495-35997858)
chr4 (155-498)||(2828163-2828507)
chr4 (221-522)||(2348817-2349116)
chr4 (201-504)||(27626476-27626778)
chr4 (183-498)||(51040758-51041074)
chr4 (151-397)||(39085006-39085252)
chr4 (158-397)||(44992806-44993045)
chr4 (195-439)||(34460260-34460504)
chr4 (160-397)||(43778389-43778626)
chr4 (164-522)||(44556624-44556971)
chr4 (160-397)||(39922861-39923098)
chr4 (206-397)||(39190673-39190864)
chr4 (159-397)||(42879274-42879521)
chr4 (160-397)||(5485906-5486143)
chr4 (160-406)||(4520296-4520542)
chr4 (160-249)||(2350542-2350631)
chr4 (160-249)||(44794795-44794884)
chr4 (160-249)||(47941811-47941900)
chr4 (159-251)||(10372739-10372831)
chr4 (159-251)||(44558526-44558618)
chr4 (159-251)||(10762580-10762672)
chr4 (165-397)||(32653485-32653717)
chr4 (194-327)||(230470-230603)
chr4 (216-330)||(43823491-43823604)
chr4 (155-249)||(35996058-35996152)
chr4 (159-252)||(39083638-39083731)
chr4 (161-273)||(6999278-6999390)
chr4 (312-406)||(13450154-13450248)
chr4 (196-273)||(833259-833336)
chr4 (196-249)||(4173740-4173793)
chr4 (196-273)||(5439623-5439700)
chr4 (160-269)||(25995094-25995203)
chr4 (196-249)||(35404480-35404533)
chr4 (196-249)||(39345600-39345653)
chr4 (159-252)||(39921493-39921586)
chr4 (196-249)||(41761781-41761834)
chr4 (196-249)||(43507203-43507256)
chr4 (196-249)||(43508653-43508706)
chr4 (196-249)||(43519460-43519513)
chr4 (160-252)||(42880787-42880879)
chr4 (161-252)||(39189383-39189474)
chr4 (312-406)||(25994957-25995051)
chr4 (439-489)||(42879561-42879611)
chr4 (197-251)||(51041963-51042017)
chr4 (199-232)||(4519415-4519448)
chr4 (196-273)||(5437847-5437924)
chr4 (444-489)||(5485816-5485861)
chr4 (214-251)||(27624860-27624897)
chr4 (196-249)||(35401785-35401838)
chr4 (444-489)||(39190583-39190628)
chr4 (444-489)||(39922771-39922816)
chr4 (196-249)||(49523160-49523213)
chr4 (456-492)||(4520228-4520264)
chr4 (160-252)||(43779899-43779991)
[»] chr8 (70 HSPs)
chr8 (159-522)||(31199484-31199848)
chr8 (158-498)||(32824024-32824364)
chr8 (158-498)||(31823228-31823569)
chr8 (206-522)||(1322042-1322359)
chr8 (160-498)||(9876314-9876653)
chr8 (165-498)||(461181-461515)
chr8 (158-522)||(24526894-24527257)
chr8 (160-403)||(33748332-33748575)
chr8 (164-498)||(42894780-42895109)
chr8 (192-466)||(8655772-8656044)
chr8 (160-498)||(37524858-37525197)
chr8 (159-366)||(40019155-40019362)
chr8 (214-498)||(33158710-33158995)
chr8 (160-498)||(33368759-33369098)
chr8 (155-406)||(25373467-25373718)
chr8 (155-406)||(25707146-25707397)
chr8 (183-400)||(25705322-25705539)
chr8 (213-406)||(25370579-25370772)
chr8 (160-249)||(31201178-31201267)
chr8 (256-496)||(38881496-38881736)
chr8 (159-406)||(25356348-25356595)
chr8 (159-251)||(38882830-38882922)
chr8 (196-251)||(33750417-33750472)
chr8 (160-275)||(44620645-44620760)
chr8 (159-273)||(9186623-9186737)
chr8 (159-273)||(23811543-23811657)
chr8 (242-403)||(12515166-12515327)
chr8 (158-251)||(42897807-42897900)
chr8 (159-251)||(9184382-9184474)
chr8 (168-252)||(28433748-28433832)
chr8 (159-251)||(32822360-32822452)
chr8 (160-251)||(1320617-1320708)
chr8 (154-251)||(462403-462500)
chr8 (196-249)||(8609842-8609895)
chr8 (196-249)||(13282514-13282567)
chr8 (196-249)||(38548831-38548884)
chr8 (161-234)||(38881429-38881502)
chr8 (196-249)||(42943426-42943479)
chr8 (183-251)||(33160181-33160249)
chr8 (196-270)||(15308240-15308314)
chr8 (196-270)||(15488609-15488683)
chr8 (159-249)||(31821417-31821507)
chr8 (159-249)||(37526058-37526148)
chr8 (196-273)||(601680-601757)
chr8 (160-249)||(8654500-8654588)
chr8 (196-273)||(13106840-13106917)
chr8 (196-273)||(27404246-27404323)
chr8 (196-249)||(27691190-27691243)
chr8 (462-498)||(33748637-33748673)
chr8 (194-273)||(11031463-11031542)
chr8 (291-366)||(28432352-28432427)
chr8 (203-249)||(9673220-9673266)
chr8 (160-249)||(5075368-5075457)
chr8 (451-504)||(11031695-11031748)
chr8 (196-249)||(13108391-13108444)
chr8 (200-249)||(26242369-26242418)
chr8 (196-249)||(27692837-27692890)
chr8 (196-273)||(29237187-29237264)
chr8 (196-249)||(29239187-29239240)
chr8 (196-265)||(33707242-33707311)
chr8 (200-249)||(33761109-33761158)
chr8 (196-249)||(33762713-33762766)
chr8 (196-237)||(34681078-34681119)
chr8 (196-249)||(35509250-35509303)
chr8 (196-249)||(38547264-38547317)
chr8 (444-489)||(40019438-40019483)
chr8 (183-243)||(10267861-10267921)
chr8 (436-504)||(10268075-10268143)
chr8 (165-217)||(28432241-28432293)
chr8 (456-504)||(44620422-44620470)
[»] chr1 (42 HSPs)
chr1 (160-519)||(27952231-27952591)
chr1 (159-522)||(47264123-47264488)
chr1 (152-498)||(31803452-31803799)
chr1 (160-522)||(45379085-45379447)
chr1 (160-498)||(33679259-33679597)
chr1 (160-522)||(44159021-44159385)
chr1 (161-498)||(46636766-46637103)
chr1 (160-522)||(42135972-42136335)
chr1 (160-500)||(35478087-35478428)
chr1 (161-522)||(6576833-6577195)
chr1 (160-397)||(5784721-5784958)
chr1 (159-397)||(11152544-11152782)
chr1 (159-403)||(18180499-18180722)
chr1 (160-249)||(27940608-27940697)
chr1 (155-251)||(46638840-46638936)
chr1 (160-251)||(35480008-35480099)
chr1 (158-251)||(47269489-47269582)
chr1 (160-251)||(33685281-33685372)
chr1 (159-251)||(36895543-36895635)
chr1 (185-253)||(44157458-44157526)
chr1 (160-251)||(42134482-42134573)
chr1 (183-251)||(18183976-18184044)
chr1 (291-406)||(25172880-25172995)
chr1 (196-249)||(4856001-4856054)
chr1 (196-273)||(26223623-26223700)
chr1 (196-249)||(31238530-31238583)
chr1 (196-249)||(34778173-34778226)
chr1 (196-249)||(46582046-46582099)
chr1 (164-228)||(36894826-36894890)
chr1 (216-275)||(51123531-51123590)
chr1 (195-249)||(15104476-15104530)
chr1 (197-251)||(31801670-31801724)
chr1 (196-273)||(9120075-9120152)
chr1 (196-249)||(9121703-9121756)
chr1 (444-489)||(11152827-11152872)
chr1 (456-493)||(18180776-18180813)
chr1 (200-249)||(25278988-25279037)
chr1 (196-249)||(27087319-27087372)
chr1 (196-249)||(33599254-33599307)
chr1 (196-249)||(34776605-34776658)
chr1 (202-251)||(45381017-45381066)
chr1 (201-273)||(34041806-34041878)
[»] chr6 (24 HSPs)
chr6 (160-518)||(4645948-4646307)
chr6 (158-522)||(29114501-29114869)
chr6 (160-522)||(30639611-30639974)
chr6 (160-397)||(17950561-17950798)
chr6 (158-397)||(35174389-35174619)
chr6 (160-249)||(4641355-4641444)
chr6 (160-249)||(2968139-2968228)
chr6 (160-251)||(29112300-29112391)
chr6 (161-406)||(31210275-31210530)
chr6 (160-251)||(29077328-29077419)
chr6 (171-251)||(3018465-3018545)
chr6 (159-397)||(34345178-34345416)
chr6 (165-219)||(4289423-4289477)
chr6 (196-249)||(13613617-13613670)
chr6 (159-252)||(17952074-17952167)
chr6 (196-249)||(32439126-32439179)
chr6 (196-249)||(3456784-3456837)
chr6 (196-273)||(3480633-3480710)
chr6 (444-489)||(17950843-17950888)
chr6 (196-249)||(20523402-20523455)
chr6 (196-273)||(32454284-32454361)
chr6 (196-249)||(32518497-32518550)
chr6 (444-489)||(35174664-35174709)
chr6 (160-252)||(35175895-35175987)
[»] chr3 (63 HSPs)
chr3 (160-522)||(40998515-40998880)
chr3 (160-499)||(48635124-48635464)
chr3 (160-496)||(45897050-45897387)
chr3 (160-522)||(33850982-33851344)
chr3 (158-495)||(33111839-33112176)
chr3 (163-522)||(45255486-45255846)
chr3 (160-498)||(23887198-23887536)
chr3 (160-406)||(40508493-40508739)
chr3 (227-498)||(23775405-23775677)
chr3 (157-406)||(1847490-1847739)
chr3 (206-397)||(37865430-37865621)
chr3 (164-522)||(18428753-18429103)
chr3 (192-498)||(31885550-31885856)
chr3 (160-406)||(2975460-2975706)
chr3 (183-395)||(24381767-24381980)
chr3 (157-251)||(23774149-23774243)
chr3 (158-251)||(40508944-40509037)
chr3 (158-366)||(41945984-41946192)
chr3 (155-251)||(41021036-41021132)
chr3 (155-251)||(48633872-48633968)
chr3 (156-251)||(33113213-33113308)
chr3 (158-251)||(2977362-2977455)
chr3 (160-272)||(33051444-33051556)
chr3 (160-251)||(23888805-23888896)
chr3 (431-498)||(24381985-24382052)
chr3 (160-251)||(31887485-31887576)
chr3 (160-251)||(45257253-45257344)
chr3 (160-251)||(51454283-51454374)
chr3 (161-275)||(49494477-49494591)
chr3 (160-273)||(40963376-40963489)
chr3 (198-406)||(30501155-30501363)
chr3 (160-247)||(18430308-18430395)
chr3 (199-265)||(53092662-53092728)
chr3 (196-249)||(2226207-2226260)
chr3 (196-249)||(53190814-53190867)
chr3 (456-496)||(1847418-1847458)
chr3 (235-315)||(51453878-51453958)
chr3 (157-251)||(45898381-45898475)
chr3 (196-249)||(21348759-21348812)
chr3 (196-249)||(23291606-23291659)
chr3 (196-249)||(27899136-27899189)
chr3 (196-249)||(30599973-30600026)
chr3 (196-249)||(35905767-35905820)
chr3 (196-249)||(38193510-38193563)
chr3 (168-249)||(41944584-41944665)
chr3 (196-249)||(41979352-41979405)
chr3 (196-249)||(46308843-46308896)
chr3 (196-249)||(53094273-53094326)
chr3 (196-249)||(54898473-54898526)
chr3 (159-251)||(24382926-24383018)
chr3 (210-249)||(33852705-33852744)
chr3 (206-265)||(46611287-46611346)
chr3 (199-249)||(38191934-38191984)
chr3 (196-249)||(3150288-3150341)
chr3 (196-249)||(3152273-3152326)
chr3 (196-273)||(28626447-28626524)
chr3 (196-249)||(41977786-41977839)
chr3 (196-249)||(44794243-44794296)
chr3 (196-249)||(46310436-46310489)
chr3 (196-249)||(46609185-46609238)
chr3 (196-249)||(53187778-53187831)
chr3 (196-249)||(54900074-54900127)
chr3 (456-504)||(40963134-40963182)
[»] chr5 (43 HSPs)
chr5 (155-498)||(32089677-32090021)
chr5 (160-498)||(32835876-32836215)
chr5 (171-497)||(38176643-38176970)
chr5 (171-497)||(38203867-38204194)
chr5 (158-496)||(40330269-40330608)
chr5 (158-495)||(35291046-35291384)
chr5 (156-504)||(18726561-18726907)
chr5 (160-498)||(33257512-33257851)
chr5 (202-495)||(43316822-43317116)
chr5 (160-397)||(42619289-42619526)
chr5 (22-136)||(12458250-12458364)
chr5 (194-387)||(24232186-24232379)
chr5 (159-253)||(38596867-38596961)
chr5 (160-273)||(24498045-24498158)
chr5 (160-253)||(35395333-35395426)
chr5 (160-251)||(18728635-18728726)
chr5 (160-354)||(1344711-1344905)
chr5 (196-251)||(24496779-24496834)
chr5 (160-251)||(43318093-43318184)
chr5 (185-251)||(38178126-38178192)
chr5 (185-251)||(38205350-38205416)
chr5 (196-249)||(17574354-17574407)
chr5 (156-249)||(32087510-32087603)
chr5 (196-249)||(2179823-2179876)
chr5 (196-249)||(8541271-8541324)
chr5 (196-249)||(12738736-12738789)
chr5 (196-249)||(12801559-12801612)
chr5 (196-249)||(24541247-24541300)
chr5 (196-249)||(30463936-30463989)
chr5 (196-249)||(36057648-36057701)
chr5 (196-273)||(40782187-40782264)
chr5 (199-251)||(35292415-35292467)
chr5 (464-496)||(35400462-35400494)
chr5 (160-251)||(33256400-33256491)
chr5 (183-249)||(18625043-18625109)
chr5 (199-249)||(28813765-28813815)
chr5 (199-249)||(34327674-34327724)
chr5 (196-249)||(7267879-7267932)
chr5 (196-249)||(7269446-7269499)
chr5 (196-273)||(29620174-29620251)
chr5 (196-249)||(29621816-29621869)
chr5 (196-249)||(42473642-42473695)
chr5 (444-489)||(42619571-42619616)
[»] scaffold0477 (1 HSPs)
scaffold0477 (160-249)||(6669-6758)
[»] scaffold1041 (2 HSPs)
scaffold1041 (216-406)||(2736-2926)
scaffold1041 (183-378)||(2121-2308)
[»] scaffold0070 (1 HSPs)
scaffold0070 (257-406)||(57498-57643)
[»] scaffold1712 (1 HSPs)
scaffold1712 (196-273)||(1018-1095)
[»] scaffold0081 (1 HSPs)
scaffold0081 (196-273)||(54234-54311)
[»] scaffold0058 (3 HSPs)
scaffold0058 (196-249)||(3330-3383)
scaffold0058 (196-249)||(4502-4555)
scaffold0058 (196-249)||(14343-14396)
[»] scaffold0006 (1 HSPs)
scaffold0006 (456-489)||(38049-38082)


Alignment Details
Target: chr2 (Bit Score: 298; Significance: 1e-167; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 154 - 522
Target Start/End: Complemental strand, 41708527 - 41708158
Alignment:
Q  154 taaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 253  Q
    ||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41708527 taaatagagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 41708428  T
Q  254 attgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaa 353  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  41708427 attgtcaatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaa 41708328  T
Q  354 tttggccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactt 453  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||| |||||||||||    
T  41708327 tttagccgataattccaaacattttgaaggactaaattgattgatttgcagaaatttttttgatttcttcctaaacaactcttttcttccccaacgactt 41708228  T
Q  454 tgtcttccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41708227 tgtcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcaccta 41708158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 158 - 522
Target Start/End: Complemental strand, 15373981 - 15373616
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  15373981 ttgagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaatttgttaattg 15373882  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  15373881 tcaatcaatttagtccttctggtcaaacaggccgttaacgaggctggcgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 15373782  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtc 457  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||    
T  15373781 gctgataattccaaacattttgaaggactaaattgattgatttgcagaaatttttttaatttcttcccaaacaactcttttcttccccaacgactttgtc 15373682  T
Q  458 ttccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15373681 ttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcaccta 15373616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 159 - 441
Target Start/End: Complemental strand, 41234 - 40953
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41234 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttattaattgt 41135  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||||||||||||| || | ||| ||||||||||||||||||||||| | |||||||||||||| |||||||| ||||| |||||||||||||||||    
T  41134 caatcaatttagtccttctgttgaaatgggccgttaacggggctgacgtggccgttaacctcttacaagtcatacgtcacgt-ggcagggactaatttgg 41036  T
Q  359 ccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttctt 441  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||        | |||||||||||||| ||||||||||    
T  41035 ccgataataacaaacattttgaaggactaaattgattgatttgcagaaatttttttggtttcttcccaaacagctcttttctt 40953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 160 - 498
Target Start/End: Complemental strand, 42880902 - 42880563
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| | |||| |||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||| | ||    
T  42880902 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccataaatttgttaaatttc 42880803  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  |||||||| |||||| ||| | |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  42880802 aatcaagttagtccttttgttcaaacggagcgttaacgaggctgatgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 42880703  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||| ||  |||||||||||| |||||||||||||||||||| ||||        || |||||||||||||  |||||||||| || ||||||| | |||    
T  42880702 cgatgataacaaacattttgacggactaaattgattgatttgtagaaaatgttttgactttcttcccaaacggctcttttcttccctaacgactctttct 42880603  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  42880602 tccccaattgtataacattgaaaccctaattacacaatct 42880563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 159 - 498
Target Start/End: Complemental strand, 42003582 - 42003244
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||||| ||||| |||| |||||| | | ||||| | ||||||||| | ||||||||||||||||||||||||||| ||||||||||||| |||    
T  42003582 tgagtgaatcattaacttcgttcttgaatttttaaggatcagtcaaattcgttcatcaattatgcgaaatatcaatttaatctctgaatttgttaaatgt 42003483  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||| |||||| || || ||| ||||  ||||||| ||||||||||||| |||||||||| |||||||| |||| ||||||||| ||||||||||||    
T  42003482 caatcaagttagtcattctgttcacacggagcgttaacagggctgacgtgaccgttaacctctcacatgtcagacgctacgtaggcatggactaatttgg 42003383  T
Q  359 ccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||| |||  ||||||||| ||| ||||||||||||||||||||||||        | |||||||||||||  |||| ||||| ||||||| || | |||    
T  42003382 ccgaaaataacaaacatttcgaatgactaaattgattgatttgcagaaatttttttggtttcttcccaaactgctctcttctttcccaacggctctttct 42003283  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  42003282 t-cccaattgtataaaattggaaccctaattacacaatct 42003244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 160 - 498
Target Start/End: Complemental strand, 37418860 - 37418521
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | |||||| |||||| |||||||||||||||| | |||||||| |||||||||| |||||||| |||||||||| ||||    
T  37418860 gagtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcctttaattatgcaaaatatcaatctaatccctaaatttgttaaatgtc 37418761  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||| || || |||||| |  |||||||| ||||||| || | |||||||||| |||||||| ||| || ||||||||||||||||||||     
T  37418760 aatcaagttagtcattctgttcaaacagagcgttaacgtggctgacatggccgttaacctctcacatgtcagacggcatgtaggcagggactaatttggt 37418661  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||        || |||||||||||||  |||||||||| || |||  || | |||    
T  37418660 cgataataacaaacatttcgaaggactaaattgattgatttgcagaaaatgttttgactttcttcccaaacggctcttttcttccctaacagctctttct 37418561  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37418560 tccccaattgtataacattggaaccctaattacacaatct 37418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 160 - 397
Target Start/End: Original strand, 11021533 - 11021770
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11021533 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 11021632  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | ||||||||  ||||||||||||||||||| | ||||| |||| |||||||| |||| |||||||||| ||||||||||||    
T  11021633 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaaactctcacatgtcagacgcaacgtaggcagagactaatttggc 11021732  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  11021733 cgataatgacctaaattttcaaggactaagttgattga 11021770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 159 - 397
Target Start/End: Complemental strand, 28248267 - 28248029
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||||||||||| || |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28248267 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 28248168  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||| |||| | ||  | ||||| ||  ||||||||||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||||||    
T  28248167 caatcaagttaggcattcagttcaaatggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttgg 28248068  T
Q  359 ccgataattccaaacattttgaaggactaaattgattga 397  Q
    ||||||||  |  | ||||| ||||||||| ||||||||    
T  28248067 ccgataatgacctaaattttcaaggactaagttgattga 28248029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 160 - 319
Target Start/End: Original strand, 33193 - 33352
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  33193 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaatttgttaaatgtc 33292  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacct 319  Q
    |||||| ||||||||| || ||||||||  ||||||||||||||||||| | ||||||||    
T  33293 aatcaagttagtccttttgttcaaacggagcgttaacggggctgacgtggccgttaacct 33352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 41706539 - 41706628
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| |||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 15372498 - 15372588
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||| |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  15372498 tgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaattt 15372588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 39564 - 39645
Alignment:
Q  168 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| ||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39564 catcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 406
Target Start/End: Original strand, 35461 - 35544
Alignment:
Q  323 acatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||| ||||||||||||||||||||||||||| |||||||   |||||||| ||||||||||||||||||||||||||||    
T  35461 acatgtcagacgccacgtaggcagggactaatttggtcgataataataaacatttcgaaggactaaattgattgatttgcagaa 35544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 29909784 - 29909693
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || |||||||| |||||  |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgt 29909693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 37417296 - 37417364
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||| ||| || |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  37417296 tgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 37417364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 17949018 - 17948903
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | ||||||  || | ||| |||||| |||||||  |||| ||||||||||||||||  ||| ||||||||| || ||||    
T  17949018 gagtgaatcatcaacttcgtccatgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgtccttgaatttgtaaaatgtc 17948919  T
Q  260 aatcaatttagtcctt 275  Q
    ||||||||| ||||||    
T  17948918 aatcaatttcgtcctt 17948903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 15432365 - 15432419
Alignment:
Q  197 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||| ||||||| |||||||||||||||||||||||||||| || ||||||||||    
T  15432365 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgt 15432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 361445 - 361518
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaa 233  Q
    ||||||||||||||||| || | |||||| ||| | |||||||||| || ||||||||||||| ||||||||||    
T  361445 gagtgaatcatcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaa 361518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 14389192 - 14389139
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  14389192 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 14389139  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 42001609 - 42001701
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| |||||| || || | |||||| | |||| | | |||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  42001609 tgagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaatttaatccttgaatttgt 42001701  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 39521 - 39430
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || || ||||| |||||  || ||||| || || |||||||||||||||||||||| ||| |||||||||||||    
T  39521 gagtgaaccatcaaatttgtccccgaattttcacgcgtcagccaactttgtacctcaattatgcgaaatatcaacttagtccctgaatttgt 39430  T

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Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 11313003 - 11313094
Alignment:
Q  312 gttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgca 403  Q
    |||||||||| |||||||  | | ||| ||||||| |||||||||||||||||||  | || ||||| || ||| |||||||||||||||||    
T  11313003 gttaacctctcacatgtctgatgtcacataggcagtgactaatttggccgataataaccaaaattttcaaagacgaaattgattgatttgca 11313094  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 366
Target Start/End: Complemental strand, 38149975 - 38149900
Alignment:
Q  291 gttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataat 366  Q
    |||||||| |||||||||   |||||||||| |||||||| | | |||||| ||||||||||| ||||||||||||    
T  38149975 gttaacggtgctgacgtggtcgttaacctctcacatgtcagatgtcacgtaagcagggactaagttggccgataat 38149900  T

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Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 35577 - 35619
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  35577 tcttccccaattgtataaaattcgaaccttaattacacaatct 35619  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 25619697 - 25619751
Alignment:
Q  197 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||| ||||||| |||||||||||||| ||||||||| ||| |||||||||||||    
T  25619697 tcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgt 25619751  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 16763112 - 16763165
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  16763112 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 16763165  T

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Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 16764664 - 16764611
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  16764664 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 24205634 - 24205711
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  24205634 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 24205711  T

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Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 24208150 - 24208097
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||||| ||||||||||| ||| |||||||||||    
T  24208150 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 24208097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 40560263 - 40560312
Alignment:
Q  200 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  40560263 gccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 40560312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 92470 - 92380
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || |||||||| ||||| ||| | ||| ||||| |||||||||||||||||||||| ||| ||  |||||||||    
T  92470 gagtgaaccatcaaatt-gtccctgaattttcacgcatcagtcaacttcgtacctcaattatgcgaaatatcaacttagtctttgaatttgt 92380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 326
Target Start/End: Complemental strand, 363652 - 363617
Alignment:
Q  291 gttaacggggctgacgtgactgttaacctcttacat 326  Q
    |||||||| |||||||||||||||||||||||||||    
T  363652 gttaacggtgctgacgtgactgttaacctcttacat 363617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 489
Target Start/End: Complemental strand, 363496 - 363450
Alignment:
Q  443 cccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    |||||||||| | |||||||||| | |||||||||||||||||||||    
T  363496 cccaacgactatttcttccccaaatatataaaattggaaccctaatt 363450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 6786089 - 6786036
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| ||||||  |||||||||| ||| |||||||||||    
T  6786089 atcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattt 6786036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 14387385 - 14387438
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  14387385 atcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 19908354 - 19908301
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| ||| |||||||    
T  19908354 atcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattt 19908301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 28247984 - 28247939
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  28247984 ccaacgactatttcttccccaaatatataaaattggaaccctaatt 28247939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 37022238 - 37022161
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    |||| |||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  37022238 atcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 37022161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 39664856 - 39664803
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||  |||| | ||||||||| ||||| |||||||||||    
T  39664856 atcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattt 39664803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 7745323 - 7745255
Alignment:
Q  200 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaattt 268  Q
    |||||| |||||||  |||| ||||||||||||||||  | | ||||||||| || |||||||||||||    
T  7745323 gccaaaatcgtccccaaattttgcgaaatatcaatttcgttcttgaatttgtaaaatgtcaatcaattt 7745255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 11023128 - 11023045
Alignment:
Q  168 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    |||||| || || |||||||| ||| || ||||||||||||||||| |||||   |||||||||||  || ||||||||||||||    
T  11023128 catcaatttcgtccctgaattttcaggg-tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtt 11023045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 159 - 522
Target Start/End: Original strand, 8421415 - 8421779
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8421415 tgagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 8421514  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  8421515 caatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtatgcaaggactaatttgg 8421614  T
Q  359 ccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||||||||||||||||    
T  8421615 ccgataattccaaacattttgaaggactaaattgattgatttgcagaaatttttttgatttcttcccaaacaactcttttcttccccaacgactttgtct 8421714  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  8421715 tccccaattatataaaattgaaaccctaattacacaatctataatctacattctaatatcaccta 8421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 160 - 522
Target Start/End: Original strand, 35342425 - 35342789
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35342425 gagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 35342524  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35342525 aatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggtcgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 35342624  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttctt-gcccaacgactttgtct 458  Q
    |||||||||||||||||||||||||||||||||||||||||| |||          | ||||||||||||||||||||||||  ||||||||||||||||    
T  35342625 cgataattccaaacattttgaaggactaaattgattgatttgtagattttttttttaattcttcccaaacaactcttttcttcccccaacgactttgtct 35342724  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35342725 tccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcaccta 35342789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 161 - 522
Target Start/End: Complemental strand, 36756973 - 36756611
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 260  Q
    |||||||||||||||| ||||||||||| ||| ||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  36756973 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgttaaatgtca 36756874  T
Q  261 atcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggcc 360  Q
    ||||| |||| |||| || ||||||||  |||||||||| |||||||| | |||||||||| |||||||| ||||||| ||| |||||||||||||||||    
T  36756873 atcaagttagcccttctgttcaaacggagcgttaacgggactgacgtggccgttaacctctcacatgtcagacgccacatagacagggactaatttggcc 36756774  T
Q  361 gataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttc 460  Q
    ||||||  ||||||||| ||||||||||||||||||||||||||||        | |||||||||||||  |||| ||||| |||||||||  | |||||    
T  36756773 gataataacaaacatttcgaaggactaaattgattgatttgcagaaatttttttggtttcttcccaaactgctctcttcttccccaacgacactttcttc 36756674  T
Q  461 cccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||| |||||||||||||||||||  |||| ||| ||||| ||||||||    
T  36756673 cccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcaccta 36756611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 161 - 522
Target Start/End: Original strand, 3690151 - 3690513
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 260  Q
    |||||||||||||||| || | |||||| | || | |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  3690151 agtgaatcatcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtca 3690250  T
Q  261 atcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggcc 360  Q
    ||||| ||||||||| |  ||||||||  ||||||||||||||||||||  |||||||||| ||||||||  |||||||||||||||||||||||||||     
T  3690251 atcaagttagtccttctattcaaacggagcgttaacggggctgacgtgatcgttaacctctcacatgtcaggcgccacgtaggcagggactaatttggct 3690350  T
Q  361 gataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttc 460  Q
    ||||||  ||||||||| ||||||||||||||||||||||||||||        | |||||||| ||||  |||||||||| ||||| | || |||||||    
T  3690351 gataataacaaacatttcgaaggactaaattgattgatttgcagaattttttttggtttcttccgaaacggctcttttcttccccaatggctctgtcttc 3690450  T
Q  461 cccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||||||||||||||||| |  |||| ||||||||| ||||||||    
T  3690451 cccaattgtataaaattggaaccctaattacacaatttgcaatctacattctaaaatcaccta 3690513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 161 - 522
Target Start/End: Complemental strand, 36766497 - 36766135
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 260  Q
    |||||||||||||||| ||||||||||| ||| ||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  36766497 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgttaaatgtca 36766398  T
Q  261 atcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggcc 360  Q
    ||||| |||| |||| || ||||||||  |||||||||| |||||||| | |||||||||| |||||||| ||||||| ||| |||||||||||||||||    
T  36766397 atcaagttagcccttctgttcaaacggagcgttaacgggactgacgtggccgttaacctctcacatgtcagacgccacatagacagggactaatttggcc 36766298  T
Q  361 gataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttc 460  Q
    ||||||  ||||||||| ||||||||||||||||||||||||||||        | |||||||||||||  |||| ||||| |||||||||  | |||||    
T  36766297 gataataacaaacatttcgaaggactaaattgattgatttgcagaaatttttttggtttcttcccaaactgctctcttcttccccaacgacactttcttc 36766198  T
Q  461 cccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||| ||||||||||| |||||||  |||| ||| ||||| ||||||||    
T  36766197 cccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctaaaatcaccta 36766135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 165 - 522
Target Start/End: Complemental strand, 36762766 - 36762408
Alignment:
Q  165 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatca 264  Q
    |||||||||||| || |||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  36762766 aatcatcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgttaaatgtcaatca 36762667  T
Q  265 atttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgata 364  Q
    | ||||  ||| || ||||||||  |||||||||| |||||||| | |||||||||| |||||||| ||||||| ||| |||||||||||||||||||||    
T  36762666 agttagctcttctgttcaaacggagcgttaacgggactgacgtggccgttaacctctcacatgtcagacgccacatagacagggactaatttggccgata 36762567  T
Q  365 attccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttcccca 464  Q
    ||  ||||||||| ||||||||||||||||||||||||||||        | |||||||||||||  |||| ||||| ||||||| |  | |||||||||    
T  36762566 ataacaaacatttcgaaggactaaattgattgatttgcagaaatttttttggtttcttcccaaactgctctcttcttccccaacggcgctttcttcccca 36762467  T
Q  465 attgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||| |||||||||||||||||||  |||| ||| ||||| ||||||||    
T  36762466 attgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcaccta 36762408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 162 - 522
Target Start/End: Original strand, 46810707 - 46811068
Alignment:
Q  162 gtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaa 261  Q
    ||||||||||||||| || |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaa 46810806  T
Q  262 tcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccg 361  Q
    |||| |||| |||| |  |||||| |  |||||||||| |||| ||| | |||||||||| |||||||| ||||||||||||||||||||||||||| ||    
T  46810807 tcaagttag-ccttctattcaaacagagcgttaacgggactgatgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggtcg 46810905  T
Q  362 ataattccaaacattttgaaggactaaattgattgatttgcagaa-nnnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttc 460  Q
    || ||  ||||||||| ||||||||||||||||||||||||| ||         | |||||||||||||  |||| ||||| ||||||| || | ||||     
T  46810906 atgataacaaacatttcgaaggactaaattgattgatttgcataatttttttttggtttcttcccaaactgctctcttcttccccaacggctctttcttt 46811005  T
Q  461 cccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||| ||||||||||| |||  |||| ||| ||||| ||||||||    
T  46811006 cccaattgtataaaattggaactctaattacacagtctgcaatctacactctaaaatcaccta 46811068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 159 - 498
Target Start/End: Original strand, 46994659 - 46994999
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||||||||||| || |||||||| |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  46994659 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 46994758  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||| ||||||||| || ||||||||  ||||||||||| |||||||   |||||||| | |||||||| ||||||||||||||| |||||||||||    
T  46994759 caatcaagttagtccttctgttcaaacggagcgttaacgggggtgacgtggtcgttaacctttcacatgtcagacgccacgtaggcagagactaatttgg 46994858  T
Q  359 ccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtc 457  Q
    |||||| |  ||||||||| |||||||||||||||||||||||||| ||        | |||||||| |||  ||||||||||| | |||   || | |     
T  46994859 ccgatagtaacaaacatttcgaaggactaaattgattgatttgcagaaaatgttttggctttcttcctaaatgactcttttcttccacaatagctctttt 46994958  T
Q  458 ttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    || ||||||||||||||||||||||| ||||||||||||||    
T  46994959 tttcccaattgtataaaattggaaccttaattacacaatct 46994999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 165 - 498
Target Start/End: Original strand, 47339781 - 47340114
Alignment:
Q  165 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatca 264  Q
    |||||||||||| || ||||||||   |||| |||||||| |||||| |||||| |||||||||||||||||||||  |||||||||||| |||||||||    
T  47339781 aatcatcaacttcgtccctgaatttctacgggtcggccaacttcgtctctcaatgatgcgaaatatcaatttaatctttgaatttgttaaatgtcaatca 47339880  T
Q  265 atttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgata 364  Q
    | ||| ||||| || ||||||||   ||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||| |||||||||||||||||    
T  47339881 agttaatccttctgttcaaacggagtgttaacggggctgacgtgactgttaacctctcacatgtcaggcgccacgtagacagagactaatttggccgata 47339980  T
Q  365 attccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttcccca 464  Q
    ||  || |||||| ||||||||||||||||||||||||| ||        | ||||||| | |||  |||||||||| ||||| | || |||||||||||    
T  47339981 ataacacacatttcgaaggactaaattgattgatttgcaaaaaaaaaattggtttcttctctaacggctcttttcttccccaatggctctgtcttcccca 47340080  T
Q  465 attgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||||| ||||||||||||||||||||    
T  47340081 attgtataaaatttgaaccctaattacacaatct 47340114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 160 - 495
Target Start/End: Original strand, 33775408 - 33775743
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||| ||||||| || |||||||| | |||| |||| ||| ||||||| |||||||||||||||||||||||||||||||||||| |||| ||||    
T  33775408 gagtgaatcgtcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttattaaatgtc 33775507  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  | |||||||||||||| |||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  33775508 aatcaagttagtccttctgttcaaacggagcattaacggggctgacatgaccgttaacctttcacatgtcagacgccacgtaggcagggactaatttggc 33775607  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  ||||||||| |||||||||||||||||||||||||| ||        | ||||||||||||   |||||||||| |||||   || | |||    
T  33775608 cgataataacaaacatttcgaaggactaaattgattgatttgcagaaaatgttttggctttcttcccaaatggctcttttcttccccaatagctctttct 33775707  T
Q  459 tccccaattgtataaaattggaaccctaattacacaa 495  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  33775708 tccccaattgtataaaatt-gaaccttaattacacaa 33775743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 158 - 406
Target Start/End: Complemental strand, 23955378 - 23955130
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||||||||||||| ||  ||||||| | | |||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||    
T  23955378 ttgagtgaatcatcaacttcgtctctgaatttttatggattggccaaattcgtcccttaattatgtgaaatatcaatttaatctctgaatttgttaaatg 23955279  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||| |||||| ||||| |||||||| |||||||||||||||||||| | | |||||||| |||||||| |||||| |||||| |||||||||||     
T  23955278 tcaatcaagttagtcattatgttcaaacggaccgttaacggggctgacgtggcagctaacctctcacatgtcagacgccatgtaggcggggactaatttc 23955179  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  23955178 gccgataataacaaacatttcgaaggactaaattgattgatttgcagaa 23955130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 160 - 397
Target Start/End: Original strand, 30108565 - 30108802
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 30108664  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | ||||||||  ||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  30108665 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 30108764  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  30108765 cgataatgacctaaattttcaaggactaagttgattga 30108802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 160 - 397
Target Start/End: Complemental strand, 45465275 - 45465038
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | |||||| | |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45465275 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 45465176  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | ||||||||  ||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  45465175 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 45465076  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  45465075 cgataatgacctaaattttcaaggactaagttgattga 45465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 160 - 406
Target Start/End: Complemental strand, 38614883 - 38614637
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||  || | |||||| | | || |||| ||||||| |||||||||||||| ||||||||| ||| ||| ||| |||||||| ||||    
T  38614883 gagtgaatcatcaactacgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccttgagtttgttaaatgtc 38614784  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||||| ||||||||  ||||||||||| ||||||| | |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  38614783 aatcaagttagtccttatgttcaaacggagcgttaacggggttgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 38614684  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||  |||||||||  |||||||||||||||||||||||||||    
T  38614683 cgataataacaaacatttcaaaggactaaattgattgatttgcagaa 38614637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 160 - 498
Target Start/End: Complemental strand, 40785639 - 40785301
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||| || || | |||||| |||||| |||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  40785639 gagtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaatttgttaaatgtc 40785540  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||| || || ||||| ||  | |||||||| |||||||| | |||||| ||| |||||||| |||||||||||| |||||||||||||||    
T  40785539 aatcaagttagtctttctgttcaaatggagcattaacgggactgacgtggccgttaacatctcacatgtcagacgccacgtaggtagggactaatttggc 40785440  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    ||||||   |||||||||   ||||||||| ||||||||||| || ||        | ||| || |||||| ||| ||||||| |||||||||| | | |    
T  40785439 cgataaaaacaaacatttcataggactaaactgattgatttgtagaaaatgttttggctttatttccaaacgacttttttcttccccaacgactct-ttt 40785341  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||||||||||||| ||||||||||  |||||||    
T  40785340 tccccaattgtataaaattgtaaccctaattgtacaatct 40785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 160 - 406
Target Start/End: Complemental strand, 2168925 - 2168679
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | |||||| | || | ||| |||||||| ||||| ||||| |  ||||||||||||| ||| |||||||||||| ||||    
T  2168925 gagtgaatcatcaacttcgtccttgaatttttactggtcgtccaaattcatcccttaattaagaaaaatatcaatttagtccttgaatttgttaaatgtc 2168826  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  | ||||||||||||||||| | |||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  2168825 aatcaagttagtccttctgttcaaacggagcattaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagtgactaatttggc 2168726  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||  | |||||||  |||||||||||||||||||||||||||    
T  2168725 cgataataactaacatttcaaaggactaaattgattgatttgcagaa 2168679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 197 - 403
Target Start/End: Original strand, 33037730 - 33037937
Alignment:
Q  197 tcggccaaattcgtccctcaattatgcgaaatatcaattt-aatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaa 295  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| ||||||||| || ||||||||  |||||     
T  33037730 tcggccaaattcatccctcaattatgtgaaatatcaattttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcgttag 33037829  T
Q  296 cggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgatt 395  Q
    | |||||||||||   |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||   |||||||||  |||||||||| |||||    
T  33037830 cagggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagagactaatttggccgataaaaacaaacatttcaaaggactaaactgatt 33037929  T
Q  396 gatttgca 403  Q
    ||||||||    
T  33037930 gatttgca 33037937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 158 - 321
Target Start/End: Original strand, 4321036 - 4321199
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||||||||||||| || |||||||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  4321036 ttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatg 4321135  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctct 321  Q
    |||||||| |||||||||  | ||||| ||  |||| | |||||||||||| | ||||||||||    
T  4321136 tcaatcaagttagtccttcagttcaaatggagcgttgatggggctgacgtggccgttaacctct 4321199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 8423405 - 8423316
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| |||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaattt 8423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 35344414 - 35344325
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| || ||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35344414 gagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 35344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 47341812 - 47341719
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||||| |||||| || || | |||||| |||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  47341812 ttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 47341719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 406
Target Start/End: Complemental strand, 34785140 - 34784957
Alignment:
Q  223 cgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctctt 322  Q
    |||||||||||  || ||||||||||||| || |||||||||||||||||| |  |  |||  ||   |||||||| |||||||||   ||||||||||     
T  34785140 cgaaatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccctccgtccaattggagtgttaacggtgctgacgtggtcgttaacctctc 34785041  T
Q  323 acatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||| | ||||| || ||| ||||||||||||| |||| |  | || ||||| |||||| ||||||||||||||||||||    
T  34785040 acatgtcagatgccacataagcaaggactaatttggctgatagtgaccaaaattttcaaggacaaaattgattgatttgcagaa 34784957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 280 - 366
Target Start/End: Original strand, 4321204 - 4321290
Alignment:
Q  280 tcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataat 366  Q
    ||||||||  |||| ||||| |||||||| | |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  4321204 tcaaacggagcgttgacgggactgacgtggccgttaacctctcacatatcagacgccacgtaggcagggactaatttggccgataat 4321290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 38613610 - 38613514
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||| ||||||| |||||| || || | | |||| |||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  38613610 aaatcgagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 38613514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 46996827 - 46996735
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| |||||| || || |||||||| |||||  |||||||| |||||||||||||||||||||||||||| ||| || ||||||||||    
T  46996827 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgt 46996735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 406
Target Start/End: Original strand, 34784170 - 34784285
Alignment:
Q  291 gttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaat 390  Q
    |||||||| ||||||||| | |||||||||| |||||||||| ||||| || ||||||||||||||| | |||| |  | || ||||  |||||| ||||    
T  34784170 gttaacggtgctgacgtggccgttaacctctcacatgtcatatgccacataagcagggactaatttgactgatagtgaccaaaatttccaaggacgaaat 34784269  T
Q  391 tgattgatttgcagaa 406  Q
    ||||||||||||||||    
T  34784270 tgattgatttgcagaa 34784285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 23955097 - 23955055
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23955097 tcttccccaattgtataaaattggaaccctaattacacaatct 23955055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 33038922 - 33038832
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||| || || | |||||| | | || |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  33038922 tgagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaattt 33038832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 45463664 - 45463762
Alignment:
Q  154 taaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    ||||||||||||| |||||| || || |||||||| ||| || |||||||||||||||||| ||||   |||||||||||  || ||||||||||||||    
T  45463664 taaattgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtt 45463762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 2167502 - 2167570
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||  |||| |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  2167502 tgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 2167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 46812706 - 46812615
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| ||||||||| || | |||||| | |||  |||||||||||| ||||||||||| | |||||||||||||| ||||| |||||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgt 46812615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 2168648 - 2168606
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  2168648 tcttccccaattgtataaaattgtaaccctaattacacaatct 2168606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 27955370 - 27955461
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||||||||| || || | |||||| | ||||||| || |||||| |||||||||| | ||||||||||| |||||  ||||||||||    
T  27955370 gagtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgt 27955461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 38615035 - 38614944
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || | | |||| |||||| |||  ||||||| ||||||||||||||||||||| || ||| |||||||||||||    
T  38615035 gagtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgt 38614944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 13169736 - 13169683
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  13169736 atcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 20479772 - 20479695
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  20479772 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 20479695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 27666153 - 27666100
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  27666153 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 27666100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 34784300 - 34784361
Alignment:
Q  443 cccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaatctataatc 504  Q
    |||||||||| | |||||||||| | |||||||||||||||||||||  ||||||| |||||    
T  34784300 cccaacgactctttcttccccaaatatataaaattggaaccctaattttacaatctttaatc 34784361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 35403672 - 35403619
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  35403672 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 23953848 - 23953896
Alignment:
Q  203 aaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||||| |||||||||||||||||||| ||| ||| |||||||||    
T  23953848 aaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgt 23953896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 11682823 - 11682894
Alignment:
Q  202 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    |||| ||||||||||||||||| ||||||||| ||| ||| |||||| ||||   ||| |||||||||||||    
T  11682823 caaaatcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtcc 11682894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 24228494 - 24228444
Alignment:
Q  199 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||||||| |||| ||||||||||| ||||| || ||||||||    
T  24228494 ggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 24228444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 38614623 - 38614581
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||  ||||||||||||||| ||||||||||||||||    
T  38614623 tcttccccagctgtataaaattggaatcctaattacacaatct 38614581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 56366 - 56419
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| || ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  56366 atcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 56419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 29996602 - 29996549
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||| || |||||| |||| ||||||||||||| |||||||||||||||    
T  29996602 atcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattt 29996549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 30108847 - 30108892
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  30108847 ccaacgactatttcttccccaaatatataaaattggaaccctaatt 30108892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 30940513 - 30940460
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||||||| || |||| | ||||||||| ||||| |||||||||||    
T  30940513 atcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattt 30940460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 34692839 - 34692726
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||||||  |  |||||||  ||| |||||| |||||| || ||||||||   |||||||| ||  || ||||||||||||| || ||||    
T  34692839 gagtgaatcatcaacttgatctctgaatttgcactgatcggtcaaatttgtacctcaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtc 34692740  T
Q  260 aatcaatttagtcc 273  Q
     |||||||| ||||    
T  34692739 catcaattttgtcc 34692726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 35402005 - 35402058
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| || ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  35402005 atcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 38474231 - 38474178
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| ||| |||||||    
T  38474231 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 38474178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 39857681 - 39857734
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||| ||||||    
T  39857681 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 39859317 - 39859264
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| ||| |||||||    
T  39859317 atcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattt 39859264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 1547465 - 1547417
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaatctataatc 504  Q
    |||||||||| |||||||||||| ||||||||||  ||||||| |||||    
T  1547465 tcttccccaaatgtataaaattgaaaccctaattttacaatctttaatc 1547417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 4322688 - 4322604
Alignment:
Q  168 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    |||||| || || |||||||  ||| |||||||||||| ||||||| |||||   |||||||||||  || ||||||||||||||    
T  4322688 catcaatttcgtccctgaatattcagggatcggccaaactcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtt 4322604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 13039689 - 13039613
Alignment:
Q  202 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatg 278  Q
    ||||||||||||| |||| ||||||||| | ||||| |||||||||||   || |||||||||| | ||||| ||||    
T  13039689 caaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatcagtccatatg 13039613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 19712083 - 19712035
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaatctataatc 504  Q
    |||||||||| | |||||||||||||||||||||  ||||||| |||||    
T  19712083 tcttccccaaatatataaaattggaaccctaattttacaatctgtaatc 19712035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 34784067 - 34784119
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtcc 212  Q
    ||||||||||||||||| || | ||||||  |||| |||||||||||||||||    
T  34784067 gagtgaatcatcaacttcgtccttgaatttgcacgaatcggccaaattcgtcc 34784119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 288; Significance: 1e-161; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 157 - 519
Target Start/End: Original strand, 44792931 - 44793294
Alignment:
Q  157 attgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaatt 256  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44792931 attgagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaatt 44793030  T
Q  257 gtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaattt 356  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  44793031 gtcaatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaattt 44793130  T
Q  357 ggccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgt 456  Q
    |||  ||||||||||||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||| ||||||||||||||    
T  44793131 ggctaataattccaaacattttgaaggactaaattgattgatatgcagaaatttttttgatttcttcccaaacaactcttttcttccccaacgactttgt 44793230  T
Q  457 cttccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcac 519  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44793231 cttccccatttgtataaaattggaaccctaattacacaatctataatctacattctaatatcac 44793294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 160 - 522
Target Start/End: Complemental strand, 47942837 - 47942474
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47942837 gagtgaatcatcaacttagttcatgaattatcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaattgtc 47942738  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||||||| || || || ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||    
T  47942737 aatcaatttaatcattctgatcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggtagggactaatttggc 47942638  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||        | |||||||||||||| |||||||||| |||||||||||||||||    
T  47942637 cgataattccaaacattttgaaggactaaattgattaatttgcagaaatttttttggtttcttcccaaacagctcttttcttccccaacgactttgtctt 47942538  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47942537 ccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcaccta 47942474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 160 - 522
Target Start/End: Original strand, 10371057 - 10371419
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||| |||||||||||| |||||||| |||||  ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10371057 gagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgttaattgtc 10371156  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10371157 aatcaatttagtccttctggtcaaacggcccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 10371256  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
     ||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||    
T  10371257 tgataattccaaacattttgaaggactaaattgattgatttgcagaatttttttt-atttcttcccaaacaactcttttcttccccaacgactttgtctt 10371355  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10371356 ccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcaccta 10371419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 160 - 522
Target Start/End: Complemental strand, 10768041 - 10767677
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||| |||||| |||||||||||||| |||||  ||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  10768041 gagtgaaccatcaagttagttcctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgttaattgtc 10767942  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10767941 aatcaatttagtccttctggtcaaacgggccattaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 10767842  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttctt-cccaaacaactcttttcttgcccaacgactttgtct 458  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||         |||| || ||||||||||||||||||| ||||||||||||||||    
T  10767841 tgataattccaaacattttgaaggactaaattgattaatttgcagaatttttttttattttttccccaaacaactcttttcttccccaacgactttgtct 10767742  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10767741 tccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcaccta 10767677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 160 - 522
Target Start/End: Complemental strand, 35997858 - 35997495
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35997858 gagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgttaattgtc 35997759  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||||||||||||| || ||||||||  | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35997758 aatcaatttagtccttctgttcaaacggagcattaacggggctgacgtggtcgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 35997659  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
    |||||||  |||||||||  ||||||||| |||||||||||||| ||        | ||||||| |||| | || ||||||| ||||||| || ||||||    
T  35997658 cgataataacaaacatttcaaaggactaacttgattgatttgcaaaaaaaaatttggtttcttctcaaagagctattttcttccccaacggctctgtctt 35997559  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| |||||    
T  35997558 ccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaatataaccta 35997495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 155 - 498
Target Start/End: Complemental strand, 2828507 - 2828163
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 254  Q
    |||| ||||||||||||||||| || |||||||| | | || |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  2828507 aaatagagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaa 2828408  T
Q  255 ttgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaat 354  Q
     |||||||||| ||||||||| || |||||| |   ||||||| ||||||||||   |||||||||| |||||||| |||||||||||||||||||||||    
T  2828407 atgtcaatcaagttagtccttctgttcaaactgagtgttaacgaggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaat 2828308  T
Q  355 ttggccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactt 453  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| ||        | ||||||||||||    | ||||||| |||||  |||     
T  2828307 ttggccgataataacaaacattttgaaggactaaattgattgatttgcagaaaatgttttggctttcttcccaaatggttattttcttccccaataactc 2828208  T
Q  454 tgtcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    | ||||||| ||||||||||||||||||||||||||||| |||||    
T  2828207 tttcttccctaattgtataaaattggaaccctaattacataatct 2828163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 221 - 522
Target Start/End: Original strand, 2348817 - 2349116
Alignment:
Q  221 tgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctc 320  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| || ||| || | ||||||| ||||||||||||||||||| | |||||||||    
T  2348817 tgcgaaatatcaagttaatcc-tgaatttgttaattgtcaatcaatttggttcttctgcttaaacggggcgttaacggggctgacgtggccgttaacctc 2348915  T
Q  321 ttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttc 420  Q
      |||||||||| |||||||||||||||||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||        | ||||    
T  2348916 --acatgtcatatgccacgtaggcagggactaatttgaccgataataacaaatattttgaaggactaaattgattgatttgcagaattttttttggtttc 2349013  T
Q  421 ttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcac 519  Q
    |||||||||| |||||||||| ||||||| || ||||||||||||||||||||  |||||||||||||||||||||||  |||| | |||||||||||||    
T  2349014 ttcccaaacagctcttttcttccccaacggctctgtcttccccaattgtataatgttggaaccctaattacacaatctgcaatctaaattctaatatcac 2349113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 201 - 504
Target Start/End: Complemental strand, 27626778 - 27626476
Alignment:
Q  201 ccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacgggg 300  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| || ||||||||  |||||||||||    
T  27626778 ccaaattagtccatgaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtacttctgttcaaacggagcgttaacgggg 27626679  T
Q  301 ctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgattt 400  Q
    |||||||||| |||| ||||| |||||| | ||| |||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  27626678 ctgacgtgaccgttagcctctcacatgttagacgtcacgtaggcaaggactaatttggccgataataacaaacatttcgaaggactaaattgattgattt 27626579  T
Q  401 gcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaatctat 500  Q
    ||| ||        | |||||||||||||  |||| ||||| ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||     
T  27626578 gcataatttttttgg-tttcttcccaaactgctctcttcttccccaacggctctttcttccccaattgtataaaattggaaccctaattacacaatctac 27626480  T
Q  501 aatc 504  Q
    ||||    
T  27626479 aatc 27626476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 183 - 498
Target Start/End: Original strand, 51040758 - 51041074
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtca 282  Q
    |||||| |||||| |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||| || |||    
T  51040758 tgaattttcacgggtcggccaaattcatccttcaattatgcgaaatatcaattcaatccctgaatttgttaaatgtcaatcaagtcagtccttttgttca 51040857  T
Q  283 aacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaag 382  Q
    |||||  | |||||||||||||||||||  ||||||||| |||||||| | ||||| |||||| ||||||||||| |||||||   |||||||||  |||    
T  51040858 aacggagcattaacggggctgacgtgaccattaacctctcacatgtcagatgccacataggcaaggactaatttgtccgataaaaacaaacatttcaaag 51040957  T
Q  383 gactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgtataaaattggaa 481  Q
    ||||||| |||||||||||||| ||        | |||||| |||||||||| ||||||| |||||||||| | ||||||||||||||||||||||| ||    
T  51040958 gactaaactgattgatttgcagaaaatgttttggctttctttccaaacaacttttttcttccccaacgactctttcttccccaattgtataaaattgtaa 51041057  T
Q  482 ccctaattacacaatct 498  Q
    |||||||||||||||||    
T  51041058 ccctaattacacaatct 51041074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 151 - 397
Target Start/End: Complemental strand, 39085252 - 39085006
Alignment:
Q  151 ttataaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttg 250  Q
    ||||||| |||||||||||||||||| || |||||||| | |||| |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  39085252 ttataaaatgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttg 39085153  T
Q  251 ttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggac 350  Q
    |||| |||||||||| |||||||||  | ||||||||  ||||||||||||||||||| | |||||||||| |||||||| |||||||||||||||||||    
T  39085152 ttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggac 39085053  T
Q  351 taatttggccgataattccaaacattttgaaggactaaattgattga 397  Q
    ||||||||||||||||  |  | ||||| ||||||||| ||||||||    
T  39085052 taatttggccgataatgacctaaattttcaaggactaagttgattga 39085006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 158 - 397
Target Start/End: Original strand, 44992806 - 44993045
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||||||||||||| || |||||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  44992806 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgttaaatg 44992905  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||| |||||||||  | ||||||||  ||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||| ||||||||||    
T  44992906 tcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagagactaatttg 44993005  T
Q  358 gccgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||||  |  | ||||| ||||||||| ||||||||    
T  44993006 gccgataatgacctaaattttcaaggactaagttgattga 44993045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 195 - 439
Target Start/End: Original strand, 34460260 - 34460504
Alignment:
Q  195 gatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgtta 294  Q
    |||||| |||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||| || |  |||||| || |||||    
T  34460260 gatcggtcaaattcgtctcttaattatgcaaaatatcaatttaatccctaaatttgttaattgtcgatcaatttagtcattctattcaaacagggcgtta 34460359  T
Q  295 acggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgat 394  Q
    | |||| ||||||| | |||||||||| |||||||||||||||| |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  34460360 aaggggatgacgtggccgttaacctctcacatgtcatacgccacataggcagggactaatttggccgataataacaaacatttcgaaggactaaattgat 34460459  T
Q  395 tgatttgcagaannnnnnnngatttcttcccaaacaactcttttc 439  Q
    ||||||||||||        | |||||||||||||| ||||||||    
T  34460460 tgatttgcagaattttttttggtttcttcccaaacagctcttttc 34460504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 160 - 397
Target Start/End: Original strand, 43778389 - 43778626
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | |||||| | |||| |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  43778389 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatgtc 43778488  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | ||||||||  ||||||||||||||||||| | |||||||||| |||||||| | |||||||||| |||||||||||||||    
T  43778489 aatcaagttagtccttcagttcaaacggaacgttaacggggctgacgtggccgttaacctctcacatgtcagatgccacgtaggtagggactaatttggc 43778588  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  43778589 cgataatgacctaaattttcaaggactaagttgattga 43778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 164 - 522
Target Start/End: Original strand, 44556624 - 44556971
Alignment:
Q  164 gaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatc 263  Q
    |||| |||||||| || |||||||| | |||| |||| |||||| |||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||    
T  44556624 gaattatcaactttgtccctgaatttttacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaatttgttaaatgtcaatc 44556723  T
Q  264 aatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgat 363  Q
    || ||||||||| || | |||||           ||||||||||  |||||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  44556724 aagttagtccttctgtttaaacg-----------gggctgacgttgctgttaacctctcacatgtcagacgccacgtaggcggggactaatttggccgat 44556812  T
Q  364 aattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttcccc 463  Q
    |||  ||||||||||||| ||||||||||||| ||||||||||        | |||||||||||||  |||| ||||| |||||| ||| | | || |||    
T  44556813 aataacaaacattttgaa-gactaaattgattaatttgcagaaatttttttggtttcttcccaaactgctctcttcttccccaacaactctttttttccc 44556911  T
Q  464 aattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||||||||||||  |||||||||||||||  |||| ||| ||||| ||||||||    
T  44556912 aattgtataaaattggaattctaattacacaatctgcaatctacactctaaaatcaccta 44556971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 160 - 397
Target Start/End: Complemental strand, 39923098 - 39922861
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||| |||||| || || |||||||| | || | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 39922999  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | ||||||||   |||||||||||||||||| | |||||||||| || ||||| ||||||||||||||| ||||||||| ||    
T  39922998 aatcaagttagtccttcggttcaaacggagtgttaacggggctgacgtggccgttaacctctcacctgtcagacgccacgtaggcagagactaatttagc 39922899  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  39922898 cgataatgacctaaattttcaaggactaagttgattga 39922861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 206 - 397
Target Start/End: Complemental strand, 39190864 - 39190673
Alignment:
Q  206 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgac 305  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||  | ||||||||  ||||||||||| ||||    
T  39190864 ttcgtccctcaattatgcgaaatatcaatttaatccgtgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggttgac 39190765  T
Q  306 gtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattga 397  Q
    ||| | |||||||||| |||||||| |||||||||||||||||||||||||||||||||||  |  | ||||| ||||||||| ||||||||    
T  39190764 gtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 39190673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 159 - 397
Target Start/End: Original strand, 42879274 - 42879521
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||||||||||| || |||||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  42879274 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgt 42879373  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggct---------gacgtgactgttaacctcttacatgtcatacgccacgtaggcaggga 349  Q
    ||||||| | |||||||  | ||||||||  |||||||||||||         |||||| | |||||||||| |||||||| ||||||||||||||||||    
T  42879374 caatcaagtcagtccttcagttcaaacggagcgttaacggggctgacgtggccgacgtggccgttaacctctcacatgtcagacgccacgtaggcaggga 42879473  T
Q  350 ctaatttggccgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||||||||||||  |  | ||||| ||||||||| ||||||||    
T  42879474 ctaatttggccgataatgacctaaattttcaaggactaagttgattga 42879521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 160 - 397
Target Start/End: Complemental strand, 5486143 - 5485906
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||| |||||| || || |||||||| | | || |||||||||||| ||||| ||||   |||||||||||  || |||||||||||||||| ||||    
T  5486143 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgttaaatgtc 5486044  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | ||||||||  ||||||||||||||||||||| |||||||||| |||||||| | | ||||||||||||||||||||||||    
T  5486043 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtgaccgttaacctctcacatgtcagatgtcacgtaggcagggactaatttggc 5485944  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  5485943 cgataatgacctaaattttcaaggactaagttgattga 5485906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 160 - 406
Target Start/End: Complemental strand, 4520542 - 4520296
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | |||||| | | |  |||||||||||| ||| |||||||||||||||||||| ||| | | |||||||||||| ||||    
T  4520542 gagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaacttagttcttgaatttgttaaatgtc 4520443  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  ||||||||| ||| | ||| |  ||||| ||| |||||||| |||||||||| |||| ||||||||||||    
T  4520442 aatcaagttagtccttctgttcaaacggagcgttaacggagctaatgtggcctttaacatctcacatgtcagacgccacgtaagcagagactaatttggc 4520343  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
     ||||||  ||||| |||  ||||||||||| |||||||||||||||    
T  4520342 tgataataacaaacttttcaaaggactaaatcgattgatttgcagaa 4520296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 2350631 - 2350542
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaattt 2350542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 44794884 - 44794795
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| |||||||| ||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 44794795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 47941811 - 47941900
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| |||||||| | |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaattt 47941900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 10372831 - 10372739
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| |||||| || || |||||||| |||||  ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  10372831 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgt 10372739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 44558618 - 44558526
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| ||||||||| || | |||||| |||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  44558618 tgagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 44558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 10762580 - 10762672
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| |||||| || || |||||||| |||||  ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  10762580 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 10762672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 165 - 397
Target Start/End: Complemental strand, 32653717 - 32653485
Alignment:
Q  165 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatca 264  Q
    |||||||||||| |||||||||||  ||| |||||| ||||||||||| ||||||   |||||||||||  || | ||||||||||| || |||   |||    
T  32653717 aatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccttcaatttaacgaaatatcaaaatagtgcctgaatttgtaaaatgttcgtca 32653618  T
Q  265 atttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgata 364  Q
    |||| |||| |  |  |||| ||   |||||||| |||||||||   |||||||||| |||||||| | |||||||| ||| ||||||| ||||||||||    
T  32653617 attttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctcacatgtcagatgccacgtaagcaaggactaagttggccgata 32653518  T
Q  365 attccaaacattttgaaggactaaattgattga 397  Q
    ||  |  | ||||| ||||||||| ||||||||    
T  32653517 atgacctaaattttcaaggactaagttgattga 32653485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 327
Target Start/End: Original strand, 230470 - 230603
Alignment:
Q  194 ggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgtt 293  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| || |||||||||  |  |||| ||||||||||||| | || ||||   ||  |||    
T  230470 ggatcggccaaaatcgtccctcaattatgcgaaatatcaaattagtctctgaatttggcatatgtcgatcaatttagtccctctgttcaatttgggtgtt 230569  T
Q  294 aacggggctgacgtgactgttaacctcttacatg 327  Q
    ||||| ||||||||| | |||||||||| |||||    
T  230570 aacggtgctgacgtggccgttaacctctcacatg 230603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 330
Target Start/End: Complemental strand, 43823604 - 43823491
Alignment:
Q  216 aattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgtta 315  Q
    |||| ||||||||| ||||||||||  | ||||||| || |||||||||| |||||| || || |||| ||||| |||||||| ||||||||||| ||||    
T  43823604 aattgtgcgaaataacaatttaatctttaaatttgtcaaatgtcaatcaagttagtcattctgttcaatcgggc-gttaacggtgctgacgtgaccgtta 43823506  T
Q  316 acctcttacatgtca 330  Q
    |||||| ||||||||    
T  43823505 acctctcacatgtca 43823491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 35996058 - 35996152
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||| ||||||| |||||| |||||  ||| ||| | | || |||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  35996058 aaatagagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaattt 35996152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 39083638 - 39083731
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    |||||||| |||||| || || |||||||| ||| || |||||||||||||||||| ||||   |||||||||||  || ||||||||||||||    
T  39083638 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtt 39083731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 6999390 - 6999278
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 260  Q
    ||||||||||||| || || | ||||||  |||| ||||||||||||||||| ||||||    ||||||||||  || || |||||||||| || | |||    
T  6999390 agtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtccttcaatttaatgaaatatcaaaatagtctctgaatttgtaaaatatca 6999291  T
Q  261 atcaatttagtcc 273  Q
    |||||||||||||    
T  6999290 atcaatttagtcc 6999278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 406
Target Start/End: Complemental strand, 13450248 - 13450154
Alignment:
Q  312 gttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||||| |||||| | | | |||||| ||| ||||||||||||||||||||  | || ||||  ||||||  |||||||||||||||||||    
T  13450248 gttaacctctcacatgttagatgtcacgtaagcacggactaatttggccgataatgaccaaaatttccaaggacggaattgattgatttgcagaa 13450154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 833259 - 833336
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||    
T  833259 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 833336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 4173793 - 4173740
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  4173793 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 5439700 - 5439623
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||    
T  5439700 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 5439623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 25995203 - 25995094
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | | ||||  |||| ||||||||||||  |||| |||||   |||||||||||  || | ||||||||||| || ||||    
T  25995203 gagtgaatcatcaacttcgtccataaatttgcacgaatcggccaaatttatcccccaatttaacgaaatatcaaaatagttcctgaatttgtaaaatgtc 25995104  T
Q  260 aatcaattta 269  Q
    ||||||||||    
T  25995103 aatcaattta 25995094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 35404533 - 35404480
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| |||||||||| |||||| ||||||||||  |||||||||||||||||    
T  35404533 atcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattt 35404480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 39345600 - 39345653
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||| | ||||| |||||||||||    
T  39345600 atcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 39921493 - 39921586
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    |||||||| |||||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  39921493 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 39921586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 41761834 - 41761781
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||  |||| ||||||||||| ||||| |||||||||||    
T  41761834 atcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattt 41761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 43507203 - 43507256
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  43507203 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 43508706 - 43508653
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  43508706 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 43519460 - 43519513
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  43519460 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43519513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 42880879 - 42880787
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    ||||||| |||||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  42880879 gagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 42880787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 39189383 - 39189474
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    |||||| |||||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 39189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 406
Target Start/End: Complemental strand, 25995051 - 25994957
Alignment:
Q  312 gttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||||| |||||||||| |  || || | | ||||||||||||||||||||  | || ||||| |||||| ||||||| ||||||| ||||    
T  25995051 gttaacctctcacatgtcatatgtgacataagtaaggactaatttggccgataatgaccaaaattttcaaggacgaaattgactgatttgtagaa 25994957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 489
Target Start/End: Original strand, 42879561 - 42879611
Alignment:
Q  439 cttgcccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    |||| ||||||||| | |||||||||| | |||||||||||||||||||||    
T  42879561 cttgtccaacgactatttcttccccaaatatataaaattggaaccctaatt 42879611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 51042017 - 51041963
Alignment:
Q  197 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||| ||||||| ||||||||||||| |||||||||| ||| ||| |||||||||    
T  51042017 tcggtcaaattcatccctcaattatgtgaaatatcaacttagtccatgaatttgt 51041963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 232
Target Start/End: Original strand, 4519415 - 4519448
Alignment:
Q  199 ggccaaattcgtccctcaattatgcgaaatatca 232  Q
    |||||||||| |||||||||||||||||||||||    
T  4519415 ggccaaattcatccctcaattatgcgaaatatca 4519448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 5437847 - 5437924
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    |||||| || ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||    
T  5437847 atcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 5437924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 5485861 - 5485816
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  5485861 ccaacgactatttcttccccaaatatataaaattggaaccctaatt 5485816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 27624860 - 27624897
Alignment:
Q  214 tcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  27624860 tcaattatgcgaaatatcaacttagtccctgaatttgt 27624897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 35401785 - 35401838
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| || |||||||| ||||| ||| |||||||    
T  35401785 atcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 39190628 - 39190583
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  39190628 ccaacgactatttcttccccaaatatataaaattggaaccctaatt 39190583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 39922816 - 39922771
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  39922816 ccaacgactatttcttccccaaatatataaaattggaaccctaatt 39922771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 49523160 - 49523213
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| |||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  49523160 atcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattt 49523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 492
Target Start/End: Complemental strand, 4520264 - 4520228
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattaca 492  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  4520264 tcttcgccaattatataaaattggaaccctaattaca 4520228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 43779991 - 43779899
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    ||||||| | |||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 43779899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 285; Significance: 1e-159; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 159 - 522
Target Start/End: Original strand, 31199484 - 31199848
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  31199484 tgagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgttaattgt 31199583  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||    
T  31199584 caatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggacgttaacatcttacatgtcatacgccacgtaggcagggactaatttgg 31199683  T
Q  359 ccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||| ||||||||||||||||    
T  31199684 ccgataattccaaacattttgaaggactgaattgattgatttgcagaaatttttttggtttcttcccaaacaactcttttcttccccaacgactttgtct 31199783  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31199784 tccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcaccta 31199848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 158 - 498
Target Start/End: Complemental strand, 32824364 - 32824024
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  32824364 ttgagtgaatcatcaactttgtttctgaattttcacgggtcggccaaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgttaaatg 32824265  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||| |||| |||| || ||||||||  ||||||||||| ||||||||| | |||||||| |||||||| |||||||||||| |||||||||||||    
T  32824264 tcaatcaagttagcccttctgttcaaacggagcgttaacggggttgacgtgaccgctaacctctcacatgtcagacgccacgtaggtagggactaatttg 32824165  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtc 457  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||        | |||||||||||||  |||| ||||| ||||||| || | ||    
T  32824164 gccgataataacaaacatttcgaaggactaaattgattgatttgcagaaatttttttggtttcttcccaaactgctctcttcttccccaacggctctttc 32824065  T
Q  458 ttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  32824064 ttccccaattgtttaaaattggaaccctaattacacaatct 32824024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 158 - 498
Target Start/End: Complemental strand, 31823569 - 31823228
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||| ||||||||||| || |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  31823569 ttgagtggatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatg 31823470  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||| |||||||||||| ||||||||  ||||||||||||||||||| | |||||||||| |||||||| |||||||||||| |||||||||||||    
T  31823469 tcaatcaagttagtccttatgttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggtagggactaatttg 31823370  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgt 456  Q
    |  ||||||  ||||||||| |||||||||||||||||||||||||| ||        | ||||||||||||  ||| ||||||| ||||||  || | |    
T  31823369 gttgataataacaaacatttcgaaggactaaattgattgatttgcagaaaatgttttggctttcttcccaaatgactattttcttccccaacagctcttt 31823270  T
Q  457 cttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31823269 cttccccaattgtataaaattggaaccctaattacacaatct 31823228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 206 - 522
Target Start/End: Complemental strand, 1322359 - 1322042
Alignment:
Q  206 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgac 305  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||| || || ||||||||  ||||||||||||||||    
T  1322359 ttcgtccctcaattatgcaaaatatcaatttaatccctgaatttgttaaatatcaatcaagttagtcattctgttcaaacggagcgttaacggggctgac 1322260  T
Q  306 gtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcaga 405  Q
    |||   |||||||||| ||||||||  |||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  1322259 gtggtcgttaacctctcacatgtcaggcgccacataggcaaggactaatttggccgataataacaaacattttgaaggactaaattgattgatttgcata 1322160  T
Q  406 annnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaatctataatc- 504  Q
    |          |||||||| ||||  |||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||  ||||     
T  1322159 atttttttttgtttcttccgaaacggctcttttcttccccaatggctctgtcttccccaattgtataaaattggaaccctaattacacaatctgcaatct 1322060  T
Q  505 acattctaatatcaccta 522  Q
    ||||||||| ||||||||    
T  1322059 acattctaaaatcaccta 1322042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 160 - 498
Target Start/End: Complemental strand, 9876653 - 9876314
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| ||| ||||||| |||| ||||||  || ||| ||||| |||||||| ||||||||||||||| |||||||||||||| ||||    
T  9876653 gagtgaatcatcaactttgtttctgaattttcactgatcggttaacttcatcccttaattatgcaaaatatcaatttaatacctgaatttgttaaatgtc 9876554  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||| ||||| || |||||| |  | ||||||||||||||||| | ||||||| || |||||||| ||||||||||| || |||||||||||||    
T  9876553 aatcaagttaatccttctgttcaaacagagctttaacggggctgacgtggccgttaaccactcacatgtcagacgccacgtagacatggactaatttggc 9876454  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||        || |||||||||||| | |||||||||| |||||| ||| | |||    
T  9876453 cgataataacaaacattttgaaggactaaattgattgatttgtagaaaatgttttgactttcttcccaaatagctcttttcttccccaacaactctttct 9876354  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  9876353 tccccaattgtataaaattgaaaccctaattatacaatct 9876314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 165 - 498
Target Start/End: Original strand, 461181 - 461515
Alignment:
Q  165 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatca 264  Q
    |||||||||||| || | |||||| |||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||| |||||||||    
T  461181 aatcatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaatttgttaaatgtcaatca 461280  T
Q  265 atttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgata 364  Q
    | ||||||||| || ||||||||   ||||||||||||||| | || |||||||||| |||||||||||||||| |||||| |||||||||||||| |||    
T  461281 agttagtccttttgttcaaacggagtgttaacggggctgacatcaccgttaacctctcacatgtcatacgccacataggcaaggactaatttggccaata 461380  T
Q  365 attccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttcccc 463  Q
    |   |||||||||  |||||||||| |||||||||||||| ||        | |||||||||||||| |||||||||| ||||||  || | |||||| |    
T  461381 aaaacaaacatttcaaaggactaaactgattgatttgcagaaaatgtcttggctttcttcccaaacagctcttttcttccccaacagctctttcttcctc 461480  T
Q  464 aattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||||||| |||||||||||||||||||    
T  461481 aattgtataaaattgtaaccctaattacacaatct 461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 158 - 522
Target Start/End: Original strand, 24526894 - 24527257
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    |||||| ||||||| |||| || ||||||||  ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  24526894 ttgagtaaatcatccacttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaatttgttaaatg 24526993  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||| ||||||||| || ||||||||  |||||||||||||  |||||| |||||||||| ||||||||  |||||||||| ||  || |||||||    
T  24526994 tcaatcaagttagtccttctgttcaaacggagcgttaacggggctatcgtgaccgttaacctctcacatgtcaggcgccacgtagacatagagtaatttg 24527093  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtc 457  Q
    |||| | ||  ||||||||| ||||||||||||||||||||||||||||        | |||||||| ||||  |||||||||| | ||| | || | ||    
T  24527094 gccg-ttataacaaacatttcgaaggactaaattgattgatttgcagaatttttttgg-tttcttccgaaacggctcttttcttcctcaatggctctatc 24527191  T
Q  458 ttccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  24527192 ttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcaccta 24527257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 160 - 403
Target Start/End: Original strand, 33748332 - 33748575
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaattcctgaatttgttaaatgtc 33748431  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||||| || |||||  |||||||||||||||||||   |||||||| | |||||||| ||||||||||||||| ||||||||||||    
T  33748432 aatcaagttagtccttatgttcgaacggagcgttaacggggctgacgtggtcgttaacctttcacatgtcagacgccacgtaggcagagactaatttggc 33748531  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgca 403  Q
    |||||||  ||||||||| |||||||||||||||||||||||||    
T  33748532 cgataataacaaacatttcgaaggactaaattgattgatttgca 33748575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 164 - 498
Target Start/End: Original strand, 42894780 - 42895109
Alignment:
Q  164 gaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatc 263  Q
    ||||||||||||| ||   |||||| |||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42894780 gaatcatcaactttgtctttgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatc 42894879  T
Q  264 aatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgat 363  Q
    || ||||||||| || | ||| ||  |||||||| | || ||||| | |||||||||| ||||||      ||| | ||||||| |||||||||||||||    
T  42894880 aagttagtccttctgtttaaatggagcgttaacgagactaacgtggccgttaacctctcacatgt------ccatgcaggcaggaactaatttggccgat 42894973  T
Q  364 aattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtcttccc 462  Q
    |||  ||||||||| ||||||||||||||||||||||||||||        || |||||||||||||| || ||||||| || |||| || | |||||||    
T  42894974 aataacaaacatttcgaaggactaaattgattgatttgcagaaaatattttgactttcttcccaaacagctattttcttccctaacggctctttcttccc 42895073  T
Q  463 caattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42895074 caattgtataacattggaaccctaattacacaatct 42895109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 192 - 466
Target Start/End: Complemental strand, 8656044 - 8655772
Alignment:
Q  192 acggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccg 291  Q
    |||| |||| ||||||||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||| ||| ||    
T  8656044 acgggtcggtcaaattcgtc--tcaactatgcgaaatatcaatttaatcccagaatttgttaattgtcaatcaatttaatccttctgttcaaatggggcg 8655947  T
Q  292 ttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaatt 391  Q
    ||||||||||||| |||    ||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||  |||| |||| |||||||||||||    
T  8655946 ttaacggggctgatgtggtcattaacctctcacatgtcatacaccacgtaggtagggactaatttggtcgataataacaaaaatttcgaaggactaaatt 8655847  T
Q  392 gattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaat 466  Q
    |||||||||||||||        | |||||||||||||| |||||||||| ||||||| || |||||||||||||    
T  8655846 gattgatttgcagaattttttttggtttcttcccaaacagctcttttcttccccaacggctctgtcttccccaat 8655772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 160 - 498
Target Start/End: Original strand, 37524858 - 37525197
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||| ||| ||| || | |||||| | |||| |||| ||||||| ||||| ||||||| ||||||||||| ||||| ||||||||||||| ||||    
T  37524858 gagtgaatcctcaccttcgtccttgaatttttacgggtcggtcaaattcatcccttaattatgtgaaatatcaatctaatctctgaatttgttaaatgtc 37524957  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  | |||| ||| |||||||||| |||||||||| |||||||| ||| ||||| ||||||||||||||||||    
T  37524958 aatcaagttagtccttctgttcaaacggagcattaatgggactgacgtgaccgttaacctctcacatgtcagacgtcacgttggcagggactaatttggc 37525057  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    ||||||   |||||||||  |||||||||| |||||||||||||| ||        | |||||| ||||||  |||||||||| ||||||| || | | |    
T  37525058 cgataaaaacaaacatttcaaaggactaaactgattgatttgcagaaaatgttttggctttctttccaaacggctcttttcttccccaacggctctttat 37525157  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  37525158 tccccaattgtataaaattgtaaccctaattgcacaatct 37525197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 159 - 366
Target Start/End: Original strand, 40019155 - 40019362
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||||||||||| ||   |||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40019155 tgagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 40019254  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||| |||||||||  | ||||||||  |||||||||||||| |||| | |||||||||| |||||||| |||||||||||||||||||||||||||    
T  40019255 caatcaagttagtccttcagttcaaacggagcgttaacggggctgtcgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttgg 40019354  T
Q  359 ccgataat 366  Q
    ||||||||    
T  40019355 ccgataat 40019362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 214 - 498
Target Start/End: Original strand, 33158710 - 33158995
Alignment:
Q  214 tcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgt 313  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || ||||| |   ||||||||||||||||||| | ||    
T  33158710 tcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtcaattaagttagtccttctgttcaaaggaagcgttaacggggctgacgtggccgt 33158809  T
Q  314 taacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnn 412  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||||||||   |||||||||  |||||||||| |||||||||||||| ||          
T  33158810 taacctctcacatgtcagacaccacgtaggcagagactaatttggccgataagaacaaacatttcaaaggactaaagtgattgatttgcagaaaatgttt 33158909  T
Q  413 nngatttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
      | ||||||||||||   ||||||||||  |||||| || | ||||||||||||||||||||||| |||||||||||||||||||    
T  33158910 tggctttcttcccaaatggctcttttcttctccaacggctatttcttccccaattgtataaaattgtaaccctaattacacaatct 33158995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 160 - 498
Target Start/End: Original strand, 33368759 - 33369098
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||| || ||   |||||| | ||| ||||| | ||||| || ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  33368759 gagtgaatcatcaaattcgtctttgaatttttacgaatcggtcgaattcatctctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtc 33368858  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || |||| | |  | |||| || ||||||||| | |||||||||| |||||||| ||||||||||| ||  ||||||||||||    
T  33368859 aatcaagttagtccttctgttcaaccagagcattaatggtgctgacgtggccgttaacctctcacatgtcagacgccacgtagacaatgactaatttggc 33368958  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  ||||||||||  ||||| |||||||||||||||||| ||        | ||||||||| ||||  ||||| ||| ||||||| || | |||    
T  33368959 cgataataacaaacattttagaggaccaaattgattgatttgcagaaaatattttggctttcttccccaacagatctttacttccccaacggctctttct 33369058  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||| | |||||||||||||||||||||||| |||||    
T  33369059 tccccaaatatataaaattggaaccctaattacataatct 33369098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 155 - 406
Target Start/End: Complemental strand, 25373718 - 25373467
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 254  Q
    |||| |||||||||||||| ||  | | |||||| ||||| ||||||||||||| | |||||||||||||||||||||| ||||| ||||||||||| |     
T  25373718 aaatcgagtgaatcatcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaacttaattcctgaatttgtcag 25373619  T
Q  255 ttgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaat 354  Q
      ||||||||| ||||||||| || | || | || ||||||||  | ||||||| | |||||||| | |||||||| ||||||| |||| || |||||||    
T  25373618 acgtcaatcaagttagtccttctgttaaaccagggcgttaacgatgttgacgtggccgttaacctttcacatgtcagacgccacataggtagagactaat 25373519  T
Q  355 ttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    ||| ||||||||  |||||||||  || ||| |||||||||||| |||||||    
T  25373518 ttgtccgataatatcaaacatttcaaatgaccaaattgattgatatgcagaa 25373467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 155 - 406
Target Start/End: Complemental strand, 25707397 - 25707146
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 254  Q
    |||| |||||||||||||| ||  | | | |||| | ||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |     
T  25707397 aaatcgagtgaatcatcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaacttaatccctgaatttgtgag 25707298  T
Q  255 ttgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaat 354  Q
      ||||||||| ||| ||||| || | ||   || ||||||||  ||||||||||| |||||||| | |||||||| | | ||| |||| || |||||||    
T  25707297 acgtcaatcaagttaatccttctgttaaactagggcgttaacgatgctgacgtgaccgttaacctttcacatgtcagatgtcacataggtagagactaat 25707198  T
Q  355 ttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    ||||||||||||  |||||||||  |||||| | ||||||||||||||||||    
T  25707197 ttggccgataataacaaacatttcaaaggaccatattgattgatttgcagaa 25707146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 183 - 400
Target Start/End: Original strand, 25705322 - 25705539
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtca 282  Q
    |||||| ||||| ||||| ||||  |||| |||||||||| |||||| ||||||||| | ||||||| | || |||||||||| ||||||||| |  |||    
T  25705322 tgaattttcacgtatcggtcaaaaacgtctctcaattatgggaaataacaatttaattcttgaatttatcaaatgtcaatcaagttagtccttctattca 25705421  T
Q  283 aacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaag 382  Q
    | |||   ||||| || | |||||||  ||||||||| | |||||||| ||||||| |||||| ||||||||||||| ||||||  |||||||||  |||    
T  25705422 accggagtgttaatggtgttgacgtggttgttaacctttcacatgtcagacgccacataggcatggactaatttggctgataataacaaacatttcaaag 25705521  T
Q  383 gactaaattgattgattt 400  Q
    ||||||||||||||||||    
T  25705522 gactaaattgattgattt 25705539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 213 - 406
Target Start/End: Original strand, 25370579 - 25370772
Alignment:
Q  213 ctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactg 312  Q
    |||||||||| ||||||  |||||||||||||||||||| || |||||||||| ||||||||| |  |||| | |   ||||| || | |||||||   |    
T  25370579 ctcaattatgggaaataaaaatttaatccctgaatttgtcaaatgtcaatcaagttagtccttctattcaaccagagtgttaatggtgttgacgtggtcg 25370678  T
Q  313 ttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    ||||||| | ||||||||  |||||| |||||||||||||||||| ||||||||  |||||||||  |||||| |||||||||||||| |||||    
T  25370679 ttaacctttcacatgtcaagcgccacataggcagggactaatttgaccgataataacaaacatttcaaaggaccaaattgattgatttacagaa 25370772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 31201267 - 31201178
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaattt 31201178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 256 - 496
Target Start/End: Original strand, 38881496 - 38881736
Alignment:
Q  256 tgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatt 355  Q
    |||||||||| |||| |||| || |||| ||   ||||||||| ||||||||| | |||||| ||| ||||| || ||||||||||||||  ||||||||    
T  38881496 tgtcaatcaagttagcccttctgttcaaccgtagcgttaacggtgctgacgtggccgttaacttctcacatg-cagacgccacgtaggcaatgactaatt 38881594  T
Q  356 tggccgataattccaaacattttgaaggactaaattgattgatttgcaga-annnnnnnngatttcttcccaaacaactcttttcttgcccaacgacttt 454  Q
    ||| |||||||  |||||||||  || ||  ||||||||||||||||||| |        | ||||||||| ||| ||||||||||| ||  |||||| |    
T  38881595 tggtcgataataacaaacatttcaaatgatcaaattgattgatttgcagagaatgttttggctttcttccccaacgactcttttcttcccagacgactct 38881694  T
Q  455 gtcttccccaattgtataaaattggaaccctaattacacaat 496  Q
     |||||||||| | ||||||||||||||| ||||||||||||    
T  38881695 ttcttccccaaatatataaaattggaaccttaattacacaat 38881736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 406
Target Start/End: Original strand, 25356348 - 25356595
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    ||||||||| ||||| || || | |||||| ||||| ||||| ||||  ||||  | ||||||| |||||| ||||||||||| || |||||| || |||    
T  25356348 tgagtgaattatcaaattcgtccttgaattttcacgcatcggtcaaaaacgtcttttaattatgggaaataacaatttaatccttgtatttgtcaaatgt 25356447  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    || |||| |||||| || |  |||| |||   ||||| || ||| |||||    ||||||| | |||||||| ||||||| ||||||||||||||||| |    
T  25356448 cactcaagttagtcattctattcaaccggagtgttaatggtgctaacgtggtcattaacctttcacatgtcagacgccacataggcagggactaattttg 25356547  T
Q  359 ccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    ||| ||||  |||||||||  |||||| | |||||||||||| |||||    
T  25356548 ccgttaataacaaacatttcaaaggaccatattgattgatttacagaa 25356595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 38882922 - 38882830
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| |||||| || || | |||||| ||||||||||| ||||||| ||| |||| ||||||| |||||||||||||||||||||||||    
T  38882922 tgagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgt 38882830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 33750472 - 33750417
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 33750417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 44620760 - 44620645
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || ||||||||  || | ||||| |||| |||||||  |||| ||| ||||||||||||  ||||||||||||| || || |    
T  44620760 gagtgaatcatcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatgac 44620661  T
Q  260 aatcaatttagtcctt 275  Q
    ||||||||| ||||||    
T  44620660 aatcaatttcgtcctt 44620645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 9186737 - 9186623
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||||||||||  || | ||||||  || ||||| |||||| |||||||  |||||||||||||||||| ||| ||||| ||||||  |  |||    
T  9186737 tgagtgaatcatcaactccgtccttgaatttacaaggatcagccaaaatcgtccccaaattatgcgaaatatcaaattagtccctaaatttggcatatgt 9186638  T
Q  259 caatcaatttagtcc 273  Q
    |||||||||||||||    
T  9186637 caatcaatttagtcc 9186623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 23811657 - 23811543
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    ||||| ||| |||||||| || ||||||||  ||||||||||||||||||||||| ||||| | | |||||||||  || ||| ||||||||| || |||    
T  23811657 tgagtaaattatcaacttcgtccctgaattcgcacggatcggccaaattcgtcccccaattttacaaaatatcaaaatagtccttgaatttgtaaaatgt 23811558  T
Q  259 caatcaatttagtcc 273  Q
    || ||||||| ||||    
T  23811557 cagtcaatttcgtcc 23811543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 403
Target Start/End: Original strand, 12515166 - 12515327
Alignment:
Q  242 ctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgta 341  Q
    |||||||||| || |||||||||||||||||| |  | ||||  ||   |||||||| ||||||||| | ||||| |||| |||||||| | | | | ||    
T  12515166 ctgaatttgtaaaatgtcaatcaatttagtccctccgttcaattggagtgttaacggtgctgacgtggccgttaagctctcacatgtcagatgtcgcata 12515265  T
Q  342 ggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgca 403  Q
     ||| |||||||||||||||||| |  | || ||||| |||||| |||||||||||||||||    
T  12515266 agcatggactaatttggccgatattgaccaaaattttcaaggacgaaattgattgatttgca 12515327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 42897900 - 42897807
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||||| |||||| |  || | |||||| | |||| |||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||    
T  42897900 ttgagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgt 42897807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 9184382 - 9184474
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||||||||||| || || | ||||||  |||| |||||||||||||||| | ||| || |||||||||||| ||| |||||||||||||    
T  9184382 tgagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgt 9184474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 28433832 - 28433748
Alignment:
Q  168 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    |||||| || || |||||||| ||| ||||||||||||||||||||||||||   |||||||||||  || ||||||||||||||    
T  28433832 catcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtt 28433748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 32822360 - 32822452
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| ||||||||| || | |||||| | | ||||||||||||||| ||||||||||||   ||||||||| ||| |||||||||||||    
T  32822360 tgagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgt 32822452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 1320617 - 1320708
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || | | |||| |||||| ||||| |||||| |||||||||||||| ||||||||| ||| |||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgt 1320708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 462500 - 462403
Alignment:
Q  154 taaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||| ||||||| |||||| || ||   |||||| | || |||||||||||||| ||| |||||||||||||||||||| ||| ||| |||||||||    
T  462500 taaatagagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgt 462403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 8609895 - 8609842
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  8609895 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 8609842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 13282514 - 13282567
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  13282514 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 13282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 38548884 - 38548831
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||    
T  38548884 atcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 38881429 - 38881502
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaat 234  Q
    ||||||||||||| || || | |||||| ||||| ||| ||||||||| ||||||||||||||||||| |||||    
T  38881429 agtgaatcatcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaat 38881502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 42943479 - 42943426
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  42943479 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 33160249 - 33160181
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||| |||| | |||||||||||| ||||||||||||| |||||||||| ||| || ||||||||||    
T  33160249 tgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgt 33160181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 15308314 - 15308240
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttag 270  Q
    ||||||||| ||||||||| |||||| ||||||||||| ||| |||||||||||   || |||||||||| ||||    
T  15308314 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattag 15308240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 15488683 - 15488609
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttag 270  Q
    ||||||||| ||||||||| |||||| ||||||||||| ||| |||||||||||   || |||||||||| ||||    
T  15488683 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattag 15488609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 31821417 - 31821507
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||  ||||| || || |||||||| ||||   |||| ||| |||||||||||||||||||||||||||| ||| |||| ||||||    
T  31821417 tgagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaattt 31821507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 37526148 - 37526058
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||| |||||| || || | |||||| |||||  |||| ||||||| | | |||||||||||||||||||| ||| |||||||||||    
T  37526148 tgagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaattt 37526058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 601757 - 601680
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  601757 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 601680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 8654500 - 8654588
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| |||||  ||||||| | |||  |||| ||||||||| |||||||||||||||||||| ||||||| | |||||||    
T  8654500 gagtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgttcctcaattatgcgaaatatc-atttaattcttgaattt 8654588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 13106840 - 13106917
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||| ||||||||||| | || | |||||||| |||||||    
T  13106840 atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttataaaatttcaatcaaattagtcc 13106917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 27404246 - 27404323
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||||| |||||||||||  || ||||| ||||| | || |||||||||| |||||||    
T  27404246 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaatttataaaatgtcaatcaaattagtcc 27404323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 27691190 - 27691243
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  27691190 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 27691243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 498
Target Start/End: Original strand, 33748637 - 33748673
Alignment:
Q  462 ccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||||||||||||||| ||||||||||||||    
T  33748637 ccaattgtataaaattggaaccttaattacacaatct 33748673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 11031463 - 11031542
Alignment:
Q  194 ggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    |||| ||||||| |||| |  ||||||||||||||||||| ||| | ||||| ||||| |  ||||||||||||||||||    
T  11031463 ggatgggccaaaatcgttctccaattatgcgaaatatcaaattagttcctgagtttgtcatatgtcaatcaatttagtcc 11031542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 366
Target Start/End: Original strand, 28432352 - 28432427
Alignment:
Q  291 gttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataat 366  Q
    |||||||| |||||||||   |||||||||| |||||||| | | |||||| ||||||||||| ||||| ||||||    
T  28432352 gttaacggtgctgacgtggtcgttaacctctcacatgtcagatgtcacgtaagcagggactaagttggctgataat 28432427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 9673266 - 9673220
Alignment:
Q  203 aaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||| |||| || |||||||| |||||||||||||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattt 9673220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 5075368 - 5075457
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||| || | ||||||  || | ||| |||||| |||||||  |||| ||||||||||||||||  ||| |||||||    
T  5075368 gagtgaatcatcaacttcgtccttgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaattttgtccttgaattt 5075457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 504
Target Start/End: Original strand, 11031695 - 11031748
Alignment:
Q  451 ctttgtcttccccaattgtataaaattggaaccctaattacacaatctataatc 504  Q
    |||| |||||||||| | ||||||||||||| |||||||  |||||||||||||    
T  11031695 ctttttcttccccaaatatataaaattggaagcctaattttacaatctataatc 11031748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 13108444 - 13108391
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| |||| ||||||| |||| ||||||||||||| ||| |||||||||||    
T  13108444 atcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 13108391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 26242418 - 26242369
Alignment:
Q  200 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||| |||| ||||||||||| ||||| || ||||||||    
T  26242418 gccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattt 26242369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 27692890 - 27692837
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||| ||||||||| ||| |||||||||||    
T  27692890 atcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 29237187 - 29237264
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||| ||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  29237187 atcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 29237264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 29239240 - 29239187
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  29239240 atcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 33707242 - 33707311
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaa 265  Q
    ||||| ||| ||||||||| |||| | ||||||||||| ||| ||||||||||| | || ||||||||||    
T  33707242 atcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtcaatcaa 33707311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 33761109 - 33761158
Alignment:
Q  200 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  33761109 gccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 33762766 - 33762713
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  33762766 atcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 34681119 - 34681078
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaattta 237  Q
    ||||||||||||||||||| |||| ||||||||||| |||||    
T  34681119 atcggccaaattcgtccctgaattttgcgaaatatctattta 34681078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 35509250 - 35509303
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  35509250 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 38547264 - 38547317
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||| ||||| | |||| ||||||||||||| ||| |||||||||||    
T  38547264 atcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattt 38547317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 40019438 - 40019483
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  40019438 ccaacgactatttcttccccaaatatataaaattggaaccctaatt 40019483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 10267861 - 10267921
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccct 243  Q
    |||||| | ||| ||||| |||| |||||| | ||||||||||||||| ||||||||||||    
T  10267861 tgaatttttacgaatcggtcaaaatcgtcctttaattatgcgaaatattaatttaatccct 10267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 504
Target Start/End: Original strand, 10268075 - 10268143
Alignment:
Q  436 tttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaatctataatc 504  Q
    |||||| | |||||||| | |||||||||| | |||| ||||||||||||||||   ||||||||||||    
T  10268075 tttcttcctcaacgactatttcttccccaaatatatagaattggaaccctaatttttcaatctataatc 10268143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 28432241 - 28432293
Alignment:
Q  165 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaa 217  Q
    |||||||||||| || ||||||||  ||| ||||||||||| |||||||||||    
T  28432241 aatcatcaacttggtccctgaatttgcactgatcggccaaaatcgtccctcaa 28432293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 44620470 - 44620422
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaatctataatc 504  Q
    |||||||||| |||||||||||| ||||||||||  ||||||| |||||    
T  44620470 tcttccccaaatgtataaaattgaaaccctaattttacaatctttaatc 44620422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 160 - 519
Target Start/End: Complemental strand, 27952591 - 27952231
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27952591 gagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 27952492  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  27952491 aatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcttacgccacgtatgcatggactaatttggc 27952392  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
      ||||||||||||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||| |||||||||||||||||    
T  27952391 ttataattccaaacattttgaaggactaaattgattgatatgcagaaatttttttgatttcttcccaaacaactcttttcttccccaacgactttgtctt 27952292  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcac 519  Q
    ||||| || |||||||||| ||||||||||||||||| | ||||| |||||||||||||||    
T  27952291 ccccatttttataaaattgtaaccctaattacacaatttttaatctacattctaatatcac 27952231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 159 - 522
Target Start/End: Original strand, 47264123 - 47264488
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||| |||||| ||||| |||||||| |||||  |||||||| || |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  47264123 tgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaatttcatccctgaatttgttaattgt 47264222  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  47264223 caatcaatttagtccttctggtcaaacgggctgttaacggtgctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 47264322  T
Q  359 ccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttctt-cccaaacaactcttttcttgcccaacgactttgtc 457  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||         |||| || ||||||||||||||||||| |||||||||||||||    
T  47264323 ctgataattccaaacattttgaaggactaaattgattgatttgcagaatttttttttattttttccccaaacaactcttttcttccccaacgactttgtc 47264422  T
Q  458 ttccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47264423 ttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcaccta 47264488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 152 - 498
Target Start/End: Complemental strand, 31803799 - 31803452
Alignment:
Q  152 tataaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||| |||||||||||||||||| || |||||||| |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31803799 tataaaatgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 31803700  T
Q  252 taattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggact 351  Q
    ||| |||||||||| ||||||||| || ||||||||  ||||||||||||||||||| | |||||||| | |||||||| ||||||||||||| ||||||    
T  31803699 taaatgtcaatcaagttagtccttctgttcaaacggagcgttaacggggctgacgtggccgttaacctttcacatgtcagacgccacgtaggcggggact 31803600  T
Q  352 aatttggccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacga 450  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||||||||| ||        | ||||||||||||   |||||||||| |||||       
T  31803599 aatttggccgataataacaaacatttcgaaggactaaattgattgatttgcagaaaatgttttggctttcttcccaaatggctcttttcttccccaatag 31803500  T
Q  451 ctttgtcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    || | |||||||||||||||||||||||||||  ||||||||||||||    
T  31803499 ctctttcttccccaattgtataaaattggaacgttaattacacaatct 31803452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 160 - 522
Target Start/End: Original strand, 45379085 - 45379447
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  45379085 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaatttgttaaatgtc 45379184  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  | ||||||||| ||||||| | |||||||||| |||| |||  |||||||||||||||||||||||||||    
T  45379185 aatcaagttagtccttctgttcaaacggagcattaacggggttgacgtggccgttaacctctcacatatcaggcgccacgtaggcagggactaatttggc 45379284  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
    |||||||  ||||||||| |||| ||||||||||||||| |||||||          |||||||| ||||  |||||||||| ||||| | || ||||||    
T  45379285 cgataataacaaacatttcgaagtactaaattgattgatctgcagaattatttttagtttcttccgaaacggctcttttctt-cccaatggctctgtctt 45379383  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||| |||||||||||||||||| |  |||| ||||||||| ||||||||    
T  45379384 ccccaattgtataaaattagaaccctaattacacaatttgcaatctacattctaaaatcaccta 45379447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 160 - 498
Target Start/End: Original strand, 33679259 - 33679597
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||| || || | |||||| | |||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtc 33679358  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| |  ||||||||  |||||||  || ||||||| | |||||||||| |||||||| |||||||||||||||||||||||||| |    
T  33679359 aatcaagttagtccttctattcaaacggagcgttaacaaggttgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttgac 33679458  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||        | |||||||||||||  |||| ||||| ||||||| || | ||||    
T  33679459 cgataataacaaacatttcgaaggactaaattgattgatttgcagaaatgtttttggtttcttcccaaactgctctcttcttccccaacggctctttctt 33679558  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatct 498  Q
    || |||||||| |||||||||||||||||||||||||||    
T  33679559 cctcaattgtacaaaattggaaccctaattacacaatct 33679597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 160 - 522
Target Start/End: Complemental strand, 44159385 - 44159021
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||| |||||| ||| ||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||    
T  44159385 gagtgaatcatcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaatttgttaaatgtc 44159286  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||| || || |||||||   ||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||  ||||||||||||    
T  44159285 aatcaagttagtcattctgttcaaacgaagcgttaacggggctgacgtgaccgttaacctctcacatgtcaggcgccacgtaggcaatgactaatttggc 44159186  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaa-nnnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||         | |||||||| ||||| || ||||||| ||||| | ||  ||||    
T  44159185 cgataataacaaacatttcgaaggactaaattgattgatttgcagaatttttttttggtttcttccgaaacagctattttcttccccaatggctcggtct 44159086  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||| |||||| ||||||||||||  |||| ||||||||| ||||||||    
T  44159085 tccccaattgtataaaattgaaaccctgattacacaatctgcaatctacattctaaaatcaccta 44159021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 161 - 498
Target Start/End: Original strand, 46636766 - 46637103
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 260  Q
    |||||||||||||||| ||  ||||||| |||||| ||||| || ||||||| ||||||||||||||||||||||||||  ||||||||||||| |||||    
T  46636766 agtgaatcatcaacttcgtctctgaattttcacgggtcggctaacttcgtccttcaattatgcgaaatatcaatttaatttctgaatttgttaaatgtca 46636865  T
Q  261 atcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggcc 360  Q
    ||||| ||||||||| || ||||||||  ||||||||||||||||||| | |||||||| | |||||||| |||||||||||||||||||||||||||||    
T  46636866 atcaagttagtccttctgttcaaacggagcgttaacggggctgacgtggccgttaacctttcacatgtcagacgccacgtaggcagggactaatttggcc 46636965  T
Q  361 gataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
    ||||||  |||||||||||||||||||||||||||||||||||| ||        | ||||||||||||   |||||||||| |||||   || | ||||    
T  46636966 gataataacaaacattttgaaggactaaattgattgatttgcagaaaatgttttggctttcttcccaaatggctcttttcttccccaatagctctttctt 46637065  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  46637066 ccccaatt-tataaaattggaaccttaattacacaatct 46637103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 160 - 522
Target Start/End: Complemental strand, 42136335 - 42135972
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| |||||| |||| | | ||||||| ||| ||||||| | ||||||||||||||||||||||||||||||||||||||| ||||    
T  42136335 gagtgaatcatcaacttcgttcctaaatttttatggatcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 42136236  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  ||||||| |||||||||||   |||| ||||| ||||| || ||||||||||||||| |||||||||| |    
T  42136235 aatcaagttagtccttctgttcaaacggagcgttaacagggctgacgtggtcgttatcctctcacatggcagacgccacgtaggcagagactaatttgac 42136136  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
     ||||||  ||||||||| ||||||||||||||||||||||||||||        | |||||||| ||||  ||||||||||  |||| | || | ||||    
T  42136135 tgataataacaaacatttcgaaggactaaattgattgatttgcagaaatttttttggtttcttccgaaacggctcttttcttctccaatggctctatctt 42136036  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||| ||||||||||||||||  |||| ||||||||| ||||||||    
T  42136035 ccccaattgtataaaattggaatcctaattacacaatctgcaatctacattctaaaatcaccta 42135972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 160 - 500
Target Start/End: Original strand, 35478087 - 35478428
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||||||  | |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaatttattaaatgtc 35478186  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||| |||| || |||||| |  ||||||||||||| ||||||| |||||||||| |||||||| || ||||||| | |||||||||||||||    
T  35478187 aatcaagttagcccttctgttcaaacagagcgttaacggggctaacgtgaccgttaacctctcacatgtcagacaccacgtacgtagggactaatttggc 35478286  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttctt-gcccaacgactttgtct 458  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||        | |||||||||||||   ||| |||||  ||||||| || | |||    
T  35478287 cgataataacaaacatttcgaaggactaaattgattgatttgcagaattttttttggtttcttcccaaactgttctcttcttcccccaacggctctttct 35478386  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatctat 500  Q
    ||| ||||||| |||||||| |||||||||||||||||||||    
T  35478387 tcctcaattgtttaaaattgaaaccctaattacacaatctat 35478428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 161 - 522
Target Start/End: Complemental strand, 6577195 - 6576833
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 260  Q
    |||||||||||||||| || |||||  | | | || ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||  ||| |||||    
T  6577195 agtgaatcatcaacttcgtccctgacattttatgggtcggctaaattagtccttcaattatgcgaaatatcaatttaatccctgaatttactaaatgtca 6577096  T
Q  261 atcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggcc 360  Q
    ||||| |||| |||| || ||||||||  |||||| |||||||||||| | ||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  6577095 atcaagttagcccttctgttcaaacggagcgttaatggggctgacgtggccgttaatctctcacatgtcagacgccacgtaggcagggactaatttggcc 6576996  T
Q  361 gataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttc 460  Q
    ||||||   ||||||||  |||||||||||| ||||||||||||||        | |||||||||||||  |||| ||||| ||||||  || | |||||    
T  6576995 gataataataaacatttcaaaggactaaattaattgatttgcagaattttttttggtttcttcccaaactgctctcttcttccccaacagctctttcttc 6576896  T
Q  461 cccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||||||||||| |||||||  |||| ||| ||||| ||||||||    
T  6576895 cccaattgtataaaattggaaccctaattaaacaatctgcaatctacactctaaaatcaccta 6576833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 160 - 397
Target Start/End: Complemental strand, 5784958 - 5784721
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 5784859  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | ||||||||  ||||||||||||||||||||| ||||| |||| |||||||| |||| |||||||||||||||||||||||    
T  5784858 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtgaccgttaaactctcacatgtcagacgcaacgtaggcagggactaatttggc 5784759  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  5784758 cgataatgacctaaattttcaaggactaagttgattga 5784721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 159 - 397
Target Start/End: Original strand, 11152544 - 11152782
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||||||||||| || |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  11152544 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgt 11152643  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    ||||||| |||||||||  | ||||||||    |||||| |||| ||||| | |||||||||| |||||||| ||||||||||||||| |||||||||||    
T  11152644 caatcaagttagtccttcagttcaaacggagtattaacgaggctaacgtggccgttaacctctcacatgtcagacgccacgtaggcagagactaatttgg 11152743  T
Q  359 ccgataattccaaacattttgaaggactaaattgattga 397  Q
    ||||||||  |  | ||||| ||||||||| ||||||||    
T  11152744 ccgataatgacctaaattttcaaggactaagttgattga 11152782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 159 - 403
Target Start/End: Original strand, 18180499 - 18180722
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    |||||||||| ||||||| || |||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||    
T  18180499 tgagtgaatcctcaactttgtccctgaattttcacgactcggccaaattcatccctcaattatgcgaaatatcaatttaattcctgaatttgttaaatgt 18180598  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    |||||||  |||||||| || ||||||||  ||||                     ||||||| |||||||| ||||||||||| |||||||||||||||    
T  18180599 caatcaaggtagtccttctgttcaaacggagcgtt---------------------aacctctcacatgtcagacgccacgtagacagggactaatttgg 18180677  T
Q  359 ccgataattccaaacattttgaaggactaaattgattgatttgca 403  Q
    ||||||||  |||||||||  |||||||||| ||||| |||||||    
T  18180678 ccgataataacaaacatttcaaaggactaaactgattaatttgca 18180722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 27940608 - 27940697
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| |||||||| |||| | | || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  27940608 gagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaattt 27940697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 46638936 - 46638840
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||||||| |||||| || ||||||||||| |||||  |||||||| ||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  46638936 aaattgagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgt 46638840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 35480099 - 35480008
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| ||||||||| || | |||||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||||  |||||||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgt 35480008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 47269582 - 47269489
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||||| |||||| || || |||||||| |||||  ||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||    
T  47269582 ttgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgt 47269489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 33685372 - 33685281
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || |||||||| | |||| |||| ||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttaatcattgaatttgt 33685281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 36895635 - 36895543
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| |||||| || || |||||||| |||||  |||| ||| ||||||| |||||||||||||||||||| ||| |||||||||||||    
T  36895635 tgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgt 36895543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 44157458 - 44157526
Alignment:
Q  185 aattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 253  Q
    |||| |||||| |||||||||||| |||||||||||||| ||||||||| ||| |||||||||||||||    
T  44157458 aattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtta 44157526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 42134482 - 42134573
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || | |||||| | |||| ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 42134573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 18184044 - 18183976
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||| | |||| ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||    
T  18184044 tgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 18183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 406
Target Start/End: Complemental strand, 25172995 - 25172880
Alignment:
Q  291 gttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaat 390  Q
    |||||||| ||||||||||| |||||||||| |||||||| | | ||| || |||| |||||||||| |||||| |  | || ||||  |||||| || |    
T  25172995 gttaacggtgctgacgtgaccgttaacctctcacatgtcagatgtcacataagcagagactaatttgaccgatagtgaccaaaatttccaaggacgaatt 25172896  T
Q  391 tgattgatttgcagaa 406  Q
    ||||||||||||||||    
T  25172895 tgattgatttgcagaa 25172880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 4856054 - 4856001
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||| ||||||| |||| ||||||||||||| ||| |||||||||||    
T  4856054 atcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 4856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 26223623 - 26223700
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  26223623 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 26223700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 31238583 - 31238530
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  31238583 atcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 31238530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 34778226 - 34778173
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||| ||||||| |||| ||||||||||||| ||| |||||||||||    
T  34778226 atcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 34778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 46582046 - 46582099
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  46582046 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 36894826 - 36894890
Alignment:
Q  164 gaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaat 228  Q
    ||||||||||||| || |||||||| | |||| |||||||| ||||||  |||||||||||||||    
T  36894826 gaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtcattcaattatgcgaaat 36894890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 51123590 - 51123531
Alignment:
Q  216 aattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcctt 275  Q
    |||| ||||||||||||||||  ||||||||||| | || ||||||||||||| ||||||    
T  51123590 aattttgcgaaatatcaatttcgtccctgaatttataaaatgtcaatcaatttcgtcctt 51123531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 15104476 - 15104530
Alignment:
Q  195 gatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||| ||||||||||| ||| |||| ||||||||||| ||||| |||||||||||    
T  15104476 gatcagccaaattcgttcctgaattttgcgaaatatctatttagtccctgaattt 15104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 31801670 - 31801724
Alignment:
Q  197 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||| ||| |||||||||||||||||||||||||||| ||| ||| | |||||||    
T  31801670 tcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgt 31801724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 9120075 - 9120152
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||| ||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  9120075 atcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 9120152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 9121756 - 9121703
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  9121756 atcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 9121703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 11152827 - 11152872
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    |||||| || | |||||||||| |||||||||||||||||||||||    
T  11152827 ccaacggctatttcttccccaaatgtataaaattggaaccctaatt 11152872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Original strand, 18180776 - 18180813
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacac 493  Q
    ||| ||||||||||||||||||||||| ||||||||||    
T  18180776 tctcccccaattgtataaaattggaacactaattacac 18180813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 25279037 - 25278988
Alignment:
Q  200 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||| ||| |||| ||||||||||| ||||| |||||||||||    
T  25279037 gccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattt 25278988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 27087319 - 27087372
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| |||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  27087319 atcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 27087372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 33599254 - 33599307
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||| | |||| ||||||||||||| |||||| ||||||||    
T  33599254 atcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 34776605 - 34776658
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  34776605 atcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 45381066 - 45381017
Alignment:
Q  202 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||||||||||||||||||||| ||| | | |||||||||    
T  45381066 caaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgt 45381017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 273
Target Start/End: Complemental strand, 34041878 - 34041806
Alignment:
Q  201 ccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    |||||||||||||||||||   ||||  |||||  || ||||||||||||| || ||||||| ||||||||||    
T  34041878 ccaaattcgtccctcaatttaacgaataatcaaaatagtccctgaatttgtaaaatgtcaataaatttagtcc 34041806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 248; Significance: 1e-137; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 160 - 518
Target Start/End: Complemental strand, 4646307 - 4645948
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||| |||||||||| | |||||||| | |||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  4646307 gagtgaaccatcaacttaatccctgaatttttacggatcggttaaattcgtccatcaattatgcgaaatatcaatttaatccctaaatttgttaattgtc 4646208  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  |    
T  4646207 aatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttaac 4646108  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
     ||||||||||||||||||||||||||||||||||||||||||||||        | |||||||||||||| |||||||||| |||||||||||||||||    
T  4646107 agataattccaaacattttgaaggactaaattgattgatttgcagaattttttttggtttcttcccaaacagctcttttcttccccaacgactttgtctt 4646008  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatca 518  Q
    || |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  4646007 ccacaattgtataaaattggaaccctaattacacaatctataatctacattataatatca 4645948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 158 - 522
Target Start/End: Complemental strand, 29114869 - 29114501
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||| |||||| ||||| |||||||| |||||  ||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  29114869 ttgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaatttcatccctgaatttgttaattg 29114770  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  29114769 tcaatcaatttagtccttctggtcaaacgggccattaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 29114670  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcagaa--nnnnnnnngatttctt-cccaaacaactcttttcttgcccaacgacttt 454  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||           |||| || ||||||||||||||||||| ||||||||||||    
T  29114669 gctgataattccaaacattttgaaggactaaattgattgatttgcagaatttttttttttattttttccccaaacaactcttttcttccccaacgacttt 29114570  T
Q  455 gtcttccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  29114569 gtcttccccaattgtataaaattgaaaccctaattacacaatctataatctacattctaatatcaccta 29114501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 160 - 522
Target Start/End: Original strand, 30639611 - 30639974
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||| ||||    
T  30639611 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatctatgaatttgttaaatgtc 30639710  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||| ||||||| ||||||||  | ||||||||||||||||| | |||||||||| |||||||| |||||||||||||||||| |||||||||    
T  30639711 aatcaacttagcccttatgttcaaacggagcattaacggggctgacgtggccgttaacctctcacatgtcaaacgccacgtaggcagggagtaatttggc 30639810  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
    |||||||  ||||||||| ||| ||||||||||||||||||||||||        | |||||||||||||  |||| ||||| |||||||  | | ||||    
T  30639811 cgataataacaaacatttcgaatgactaaattgattgatttgcagaaattttgttggtttcttcccaaactgctctcttcttccccaacggttctttctt 30639910  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||  |||||||||||||||||||| ||||||||||||||  |||| ||| ||||| ||||||||    
T  30639911 ccttaattgtataaaattggaaccataattacacaatctgcaatctacactctaaaatcaccta 30639974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 160 - 397
Target Start/End: Original strand, 17950561 - 17950798
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||| |||||| ||  | |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 17950660  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| | |||||||  | ||||||||  ||||||||||||||||||| | |||||||||| |||||||| | ||||||||||||||||||||||||||    
T  17950661 aatcaagtcagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagatgccacgtaggcagggactaatttggc 17950760  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  17950761 cgataatgacctaaattttcaaggactaagttgattga 17950798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 158 - 397
Target Start/End: Original strand, 35174389 - 35174619
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||||||||||||| || |||||||| | |||| |||||||| |||||  ||||||||| |||||||||||||||||  ||||||||||||| ||    
T  35174389 ttgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtttctcaattatacgaaatatcaatttaatttctgaatttgttaaatg 35174488  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||| |||||||||  | ||||||||  |||||||||||         | |||||||||| |||||||| ||||||||||||||||||||||||||    
T  35174489 tcaatcaagttagtccttcagttcaaacggagcgttaacgggg---------ccgttaacctctcacatgtcagacgccacgtaggcagggactaatttg 35174579  T
Q  358 gccgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||||  |  | ||||| ||||||||| ||||||||    
T  35174580 gccgataatgacctaaattttcaaggactaagttgattga 35174619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 4641355 - 4641444
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 4641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 2968139 - 2968228
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| ||| |||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2968139 gagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 2968228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 29112300 - 29112391
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| ||||| |||||||| |||||  ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 29112391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 161 - 406
Target Start/End: Complemental strand, 31210530 - 31210275
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 260  Q
    |||||||||||| ||| |||| ||||||   | ||||||| |||| |||||||| ||||||||||||||| || | |||||||||||||||||  ||| |    
T  31210530 agtgaatcatcagcttcgttcttgaatttgtaaggatcggtcaaaatcgtcccttaattatgcgaaatattaaataaatccctgaatttgttatatgtaa 31210431  T
Q  261 atcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctct----------tacatgtcatacgccacgtaggcagggac 350  Q
    ||||||||||||| |  |  |||   ||  |||||||| | ||||||| | ||||||||||          | ||||||||| |||||  | ||||| ||    
T  31210430 atcaatttagtccctccgtccaatttgggtgttaacggtgttgacgtggccgttaacctctcacatgggtcttcatgtcatatgccacacaagcaggaac 31210331  T
Q  351 taatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    ||||||||||||||||  | || ||||| |||||||||||||||||||||| ||||    
T  31210330 taatttggccgataataaccaaaattttcaaggactaaattgattgatttgtagaa 31210275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 29077328 - 29077419
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || |||||||| |||||  ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 29077419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 3018545 - 3018465
Alignment:
Q  171 caacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||| || |||||||| |||||  |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  3018545 caacttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 3018465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 397
Target Start/End: Complemental strand, 34345416 - 34345178
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgt 258  Q
    ||||| |||||||||||| || ||||||||  ||| ||||| |||||| ||||||||||||    ||||||||||  || ||||||||||||| || ||     
T  34345416 tgagtaaatcatcaacttggtccctgaatttgcactgatcgaccaaatccgtccctcaatttaatgaaatatcaaaatagtccctgaatttgtaaaatgc 34345317  T
Q  259 caatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttgg 358  Q
    |  ||||||| |||| |  |  |||| ||   |||||||| | || ||||   |||||||||| |||||||| | |||||||| | ||||||||| ||||    
T  34345316 ctgtcaattttgtccctccgtccaaatggagggttaacggtgttggcgtggtcgttaacctctcacatgtcaaatgccacgtaagtagggactaagttgg 34345217  T
Q  359 ccgataattccaaacattttgaaggactaaattgattga 397  Q
    ||||||||  |  | ||||| ||||||||| ||||||||    
T  34345216 ccgataatgacctaaattttcaaggactaagttgattga 34345178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 4289423 - 4289477
Alignment:
Q  165 aatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaatt 219  Q
    |||||||||||| |||||||||||  ||| |||||| ||||||||||||||||||    
T  4289423 aatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccctcaatt 4289477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 13613670 - 13613617
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||| |||||||||||    
T  13613670 atcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattt 13613617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 17952167 - 17952074
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    |||||||| |||||| || || |||||||| ||| || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  17952167 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 17952074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 32439179 - 32439126
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  32439179 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 32439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 3456784 - 3456837
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  3456784 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 3456837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 3480710 - 3480633
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||| | |||||||||||  || |||||||||||   || |||||||||| |||||||    
T  3480710 atcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtcc 3480633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 17950843 - 17950888
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  17950843 ccaacgactatttcttccccaaatatataaaattggaaccctaatt 17950888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 20523402 - 20523455
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  20523402 atcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 20523455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 32454284 - 32454361
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||| | |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  32454284 atcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 32454361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 32518550 - 32518497
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||| |||||||||||    
T  32518550 atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 35174664 - 35174709
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    ||||||||| | |||||||||| | |||||||||||||||||||||    
T  35174664 ccaacgactatttcttccccaaatatataaaattggaaccctaatt 35174709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 35175987 - 35175895
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 252  Q
    ||||||| |||||| || || | |||||| ||| |||||||||||||||||| |  ||||   |||||||||||  || ||||||||||||||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtt 35175895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 238; Significance: 1e-131; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 160 - 522
Target Start/End: Original strand, 40998515 - 40998880
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||| |||||| ||||| |||||||| |||||  |||| |||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgttaattgtc 40998614  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40998615 aatcaatttagtccttctggtcaaacgggccattaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 40998714  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaa-nnnnnnnngatttctt-cccaaacaactcttttcttgcccaacgactttgtc 457  Q
     ||||||||||||||||||||||||||||||||||||||||||||||          |||| || ||||||||||||||||||| |||||||||||||||    
T  40998715 tgataattccaaacattttgaaggactaaattgattgatttgcagaattttttttttattttttccccaaacaactcttttcttccccaacgactttgtc 40998814  T
Q  458 ttccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  40998815 ttccccaattgtataaaattgaaaccctaattacacaatctataatctacattctaatatcaccta 40998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 160 - 499
Target Start/End: Complemental strand, 48635464 - 48635124
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||| || || |||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 48635365  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    ||| || |||||| || || ||||||||  ||||||||||||||||||| | |||||||||| |||||||| |||||| |||||||||||||||||||||    
T  48635364 aattaagttagtctttctgttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccatgtaggcagggactaatttggc 48635265  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||        || ||||||||||| |  |||||||||| || |||  || | |||    
T  48635264 cgataataacaaacatttcgaaggactaaattgattgatttgcagaaaatgttttgactttcttcccaagcggctcttttcttccctaacagctctttct 48635165  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatcta 499  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  48635164 tccccaattgtataacattggaaccctaattacacaatcta 48635124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 160 - 496
Target Start/End: Original strand, 45897050 - 45897387
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | |||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45897050 gagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 45897149  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||| ||| || ||||||||  |||||||  |||||||||| | |||||||||| |||||||| |||| |||||||||||||||||||||||    
T  45897150 aatcaagttagttcttctgttcaaacggagcgttaacaaggctgacgtggccgttaacctctcacatgtcagacgcaacgtaggcagggactaatttggc 45897249  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  ||||||||| |||||||||||||||||||||||||| ||        | ||||||||||||  ||| ||||||| |||||| ||| | |||    
T  45897250 cgataataacaaacatttcgaaggactaaattgattgatttgcagaaaatgttttggctttcttcccaaatgactattttcttccccaacaactctttct 45897349  T
Q  459 tccccaattgtataaaattggaaccctaattacacaat 496  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  45897350 tccccaattgtataaaattagaaccctaattacacaat 45897387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 160 - 522
Target Start/End: Original strand, 33850982 - 33851344
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||| || ||||||||||| |||||| |||| ||| |||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  33850982 gagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaatttaatctctgaatttgttaaatgtc 33851081  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||| || || ||||||||  ||||||||||||||||||||| |||||||||| ||||||||  ||| ||||| ||||||||||||||||     
T  33851082 aatcaagttagtcattctgttcaaacggagcgttaacggggctgacgtgaccgttaacctctcacatgtcaggcgcaacgtaagcagggactaatttggt 33851181  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtctt 459  Q
    |||||||  ||||||||| ||||||||||||||||||||||||| ||        | |||||||| ||||  |||||||||| ||||| | || ||||||    
T  33851182 cgataataacaaacatttcgaaggactaaattgattgatttgcataattttttttggtttcttccgaaacggctcttttcttccccaatggctctgtctt 33851281  T
Q  460 ccccaattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    | |||||||||||||||||||| ||||||||||||||||  |||| ||||||||| ||||||||    
T  33851282 ctccaattgtataaaattggaa-cctaattacacaatctgcaatctacattctaaaatcaccta 33851344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 158 - 495
Target Start/End: Original strand, 33111839 - 33112176
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||||||||||||| || |||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33111839 ttgagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatg 33111938  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||| ||||||||| |  ||||||||  |||||| || ||||||||||| |||||||||| |||||||| ||||||||||| || |||||||||||    
T  33111939 tcaatcaagttagtccttctattcaaacggagcgttaatggagctgacgtgaccgttaacctctcacatgtcagacgccacgtagacacggactaatttg 33112038  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgt 456  Q
    |||||||||  |||||||||  |||||||||| |||||||||||||| ||        | ||||||||||||| ||| ||||||| |||||||||| | |    
T  33112039 gccgataataacaaacatttcaaaggactaaactgattgatttgcagaaaatgtttcggctttcttcccaaacgact-ttttcttccccaacgactcttt 33112137  T
Q  457 cttccccaattgtataaaattggaaccctaattacacaa 495  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  33112138 cttccccaattgtataaaattggaaccctgattgcacaa 33112176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 163 - 522
Target Start/End: Original strand, 45255486 - 45255846
Alignment:
Q  163 tgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaat 262  Q
    |||||||||||||| || |||||||| | ||||||||| ||| ||| || ||||||||||| |||||| | ||||||||||||||||||||| |||||||    
T  45255486 tgaatcatcaacttcgtccctgaatttttacggatcggtcaacttcatcactcaattatgcaaaatattactttaatccctgaatttgttaaatgtcaat 45255585  T
Q  263 caatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccga 362  Q
    ||| ||||||||| || |||||||   ||||||||||||| ||||  | |||||||||| ||||||||  ||||||||||| ||||||||||||| ||||    
T  45255586 caagttagtccttctgttcaaacgaagcgttaacggggctaacgtagccgttaacctctcacatgtcaggcgccacgtaggtagggactaatttgaccga 45255685  T
Q  363 taattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttccc 462  Q
    ||||  |||||||||||||||||||||||||||||||||||||           |||||||| ||||  |||||||||| ||||||| || |||||||||    
T  45255686 taataacaaacattttgaaggactaaattgattgatttgcagattttttttttgtttcttccgaaacggctcttttcttccccaacggctctgtcttccc 45255785  T
Q  463 caattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    ||||||||||||||| ||||||||||||||||||||  |||| ||||||||| ||||||||    
T  45255786 caattgtataaaatttgaaccctaattacacaatctgcaatctacattctaaaatcaccta 45255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 160 - 498
Target Start/End: Original strand, 23887198 - 23887536
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || | |||||| | | || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  23887198 gagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttcaatgtc 23887297  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  ||||||||||||||||||| | |||||||| | |||||||| |||||||||||||||||||||||||| |    
T  23887298 aatcaagttagtccttctgttcaaacggagcgttaacggggctgacgtggccgttaacctttcacatgtcagacgccacgtaggcagggactaatttgac 23887397  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||   || ||||| |||||||||||||||||||||||||| ||        | ||||||||||||  ||||||||||| ||||||  || | |||    
T  23887398 cgataataaaaatcatttcgaaggactaaattgattgatttgcagaaaatattttggctttcttcccaaatgactcttttcttccccaacagctctttct 23887497  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    | |||||||||||||||||| || ||||||||||||||||    
T  23887498 t-cccaattgtataaaattgaaatcctaattacacaatct 23887536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 160 - 406
Target Start/End: Original strand, 40508493 - 40508739
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgttaaatgtc 40508592  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| |  |||||| |  ||||||||||||||||||| | |||||||||| |||||||| |||||||| ||||||||||||||||||     
T  40508593 aatcaagttagtccttctattcaaacagagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgcaggcagggactaatttggt 40508692  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||  ||||||||| ||||||||||||||||||||||| ||||    
T  40508693 cgataataacaaacatttcgaaggactaaattgattgatttgtagaa 40508739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 227 - 498
Target Start/End: Complemental strand, 23775677 - 23775405
Alignment:
Q  227 atatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacat 326  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||| || |||||| |  |||||| ||||||||| |||| |||||||||| | ||    
T  23775677 atatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacagagcgttaatggggctgacttgaccgttaacctctcatat 23775578  T
Q  327 gtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttccc 425  Q
    |||| |||||||||||||||||||||||||||  ||||||  ||||||||| ||||||||||||| ||||||||||||||        || |||||||||    
T  23775577 gtcagacgccacgtaggcagggactaatttggttgataataacaaacatttcgaaggactaaattcattgatttgcagaaaatgttttgattttcttccc 23775478  T
Q  426 aaacaactcttttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||| ||||||||||| |  ||||||| | ||||||| |||||||||| ||| ||||||||||||||||||||    
T  23775477 aaacgactcttttcttccttaacgactctttcttccctaattgtataacatttgaaccctaattacacaatct 23775405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 157 - 406
Target Start/End: Complemental strand, 1847739 - 1847490
Alignment:
Q  157 attgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaatt 256  Q
    ||||||||||||||||| || || | |||||| |||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |    
T  1847739 attgagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaatttgttaaat 1847640  T
Q  257 gtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaattt 356  Q
    ||||||||| ||||||||| || ||||||||  ||||||||||| ||| ||| | |||||| ||| |||||||| ||| || | ||||| ||||||||||    
T  1847639 gtcaatcaagttagtccttctgttcaaacggagcgttaacggggatgatgtggccgttaacttctcacatgtcagacgtcatgcaggcatggactaattt 1847540  T
Q  357 ggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    || |||||||  |||||||||  |||||| || |||||||||||||||||    
T  1847539 ggtcgataataacaaacatttcaaaggaccaatttgattgatttgcagaa 1847490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 206 - 397
Target Start/End: Original strand, 37865430 - 37865621
Alignment:
Q  206 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||  | ||||||||  ||||||||||||||||    
T  37865430 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtctttcagttcaaacggagcgttaacggggctgac 37865529  T
Q  306 gtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattga 397  Q
    ||| | |||||||||| |||||||| |||||||||||||||||||||||||||||||||||  |  | ||||| ||||||||| ||||||||    
T  37865530 gtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 37865621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 164 - 522
Target Start/End: Original strand, 18428753 - 18429103
Alignment:
Q  164 gaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatc 263  Q
    ||||||||||||| || |||||||| | |||| |||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  18428753 gaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatctc-gaatttgttaaatgtcaatc 18428851  T
Q  264 aatttagtccttatggtc-aaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccga 362  Q
    || |||||| |  || || ||||||  ||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||| |||||||||| ||  |    
T  18428852 aagttagtcat--tgttcaaaacggagcgttaacggggctgacgtgaccgttaacctctcacatgtcaggcgccacgtaggca-ggactaatttagctaa 18428948  T
Q  363 taattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttccc 462  Q
     |     |||||||| ||| ||||||||||||||||||||||||          |||||||  ||||  |||||||||| ||||| | || |||||||||    
T  18428949 aa-----aaacatttcgaatgactaaattgattgatttgcagaaataattttagtttcttctaaaacggctcttttctt-cccaatggctctgtcttccc 18429042  T
Q  463 caattgtataaaattggaaccctaattacacaatctataatc-acattctaatatcaccta 522  Q
    |||||||||||||||| |||||||||||||||||||  |||| | ||||||| ||||||||    
T  18429043 caattgtataaaattgaaaccctaattacacaatctgcaatctatattctaaaatcaccta 18429103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 192 - 498
Target Start/End: Original strand, 31885550 - 31885856
Alignment:
Q  192 acggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccg 291  Q
    |||| |||| ||||||| ||||| |||||||||||||||||||||| | | |||||||| ||| |||||||||| ||||||||| || |||||| |  ||    
T  31885550 acgggtcggtcaaattcatcccttaattatgcgaaatatcaatttagtacttgaatttgctaaatgtcaatcaagttagtcctt-tgttcaaacagagcg 31885648  T
Q  292 ttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaatt 391  Q
    |||||||||| |||||| |  ||||||||| || ||||| ||||||||||||||  ||||||||| || ||||||  |||| ||||  ||| ||||||||    
T  31885649 ttaacggggccgacgtggccattaacctctcacgtgtcagacgccacgtaggcaatgactaattttgctgataataacaaatatttcaaagaactaaatt 31885748  T
Q  392 gattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaatta 490  Q
    ||||| |||||||||        || ||||||||||||| ||||||||||| ||||| |||| | ||||||  | ||||||||||||||||| |||||||    
T  31885749 gattgctttgcagaacatgttttgactttcttcccaaacgactcttttcttccccaatgactctttcttccatagttgtataaaattggaactctaatta 31885848  T
Q  491 cacaatct 498  Q
    ||||||||    
T  31885849 cacaatct 31885856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 160 - 406
Target Start/End: Original strand, 2975460 - 2975706
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||| ||| || || | |||||| | ||||||| || |||||| ||||||||| ||||||||||||||||||||||||||||||||||| | ||    
T  2975460 gagtgaatcaccaaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaatttaatccctgaatttgttaaatttc 2975559  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || || | ||   ||||||||| | ||||||| | |||||||||| |||||||| ||  |||||||||||||| ||||||||     
T  2975560 aatcaagttagtccttctgttcgaccgaaacgttaacggtgttgacgtggccgttaacctctcacatgtcagacatcacgtaggcagggattaatttggt 2975659  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||||||  |||||||||  |||||| |||||||||||||| |||||    
T  2975660 cgataatgacaaacatttcaaaggaccaaattgattgatttccagaa 2975706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 183 - 395
Target Start/End: Original strand, 24381767 - 24381980
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaat-ttgttaattgtcaatcaatttagtccttatggtc 281  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||| || |||| | |||| ||| ||||||||| || ||    
T  24381767 tgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaatttaatctttgaatatttttaaatttcaa-caagttagtccttctgttc 24381865  T
Q  282 aaacgggccgttaacgg-ggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttga 380  Q
    ||||||  |||||||||  |||||||||   |||| ||||| |||||||| ||||||||||| ||| |||| |||||||||||||   |||||||||  |    
T  24381866 aaacggagcgttaacggacgctgacgtggtcgttagcctctcacatgtcagacgccacgtagacagtgactgatttggccgataaaaacaaacatttcaa 24381965  T
Q  381 aggactaaattgatt 395  Q
    ||||||||| |||||    
T  24381966 aggactaaactgatt 24381980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 23774149 - 23774243
Alignment:
Q  157 attgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||||| |||||| || || | |||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23774149 attgagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgt 23774243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 40509037 - 40508944
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||||| |||||| || || | |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  40509037 ttgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgt 40508944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 366
Target Start/End: Complemental strand, 41946192 - 41945984
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    |||||| ||||||||| || |||||||||||  ||| |||||| |||||| |||||||||||   |||||||||||  || ||| ||||||||| || ||    
T  41946192 ttgagtaaatcatcaatttggttcctgaatttgcactgatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgtaaaatg 41946093  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    ||  ||||||| |||| |  |  |||| ||   |||||||| |||||||||   |||||||||| |||||||||| |||||||| |||| |||||| |||    
T  41946092 tccgtcaattttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctcacatgtcatatgccacgtaagcagagactaagttg 41945993  T
Q  358 gccgataat 366  Q
    |||||||||    
T  41945992 gccgataat 41945984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 41021132 - 41021036
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||| ||||||| |||||| || || |||||||| |||||  ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  41021132 aaatagagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 41021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 48633872 - 48633968
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||||||| |||||| || || | |||||| |||||| |||| ||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  48633872 aaattgagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgt 48633968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 33113308 - 33113213
Alignment:
Q  156 aattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||||||| |||||| ||||| | |||||| | |||| ||||||||| || |||||||||||||||||||||||| ||| ||||| |||||||    
T  33113308 aattgagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgt 33113213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 2977455 - 2977362
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||||||||||| || || | |||||| | ||| ||||||||||||| ||||| |||||||||||||||||||| | ||||| |||||||    
T  2977455 ttgagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgt 2977362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 33051556 - 33051444
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || ||| ||||  || | |||  ||||| |||||||| |||| ||| ||||||||||||  ||||||||||||| || ||||    
T  33051556 gagtgaatcatcaacttcgtccctaaatttgcaagcatcaaccaaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatgtc 33051457  T
Q  260 aatcaatttagtc 272  Q
    |||||||||||||    
T  33051456 aatcaatttagtc 33051444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 23888896 - 23888805
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || |||||||| ||||   |||||||| |||||||||||||||||||||||||||  ||| |||||||||||||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgt 23888805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 431 - 498
Target Start/End: Original strand, 24381985 - 24382052
Alignment:
Q  431 actcttttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||| ||||||| || | ||||||||||||||||||| ||| |||||||||||||||||||    
T  24381985 actcttttcttccccaacggctctttcttccccaattgtataaagttgtaaccctaattacacaatct 24382052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 31887576 - 31887485
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || | |||||| ||||||||||| |||||||  || |||||||||||||||||||| ||| |||||||||||||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgt 31887485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 45257344 - 45257253
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || |||| |||||| |||||| |||||||||||| |||||||||||||  ||||||||| ||| | |||||||||||    
T  45257344 gagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgt 45257253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 51454374 - 51454283
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || | |||||| ||||||||||||||||||| | |||||||||||||||||||||| ||| ||  |||||||||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgt 51454283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 49494477 - 49494591
Alignment:
Q  161 agtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtca 260  Q
    |||||||||||||||| || ||||||||  || | |||   |||| |||||||  |||| | |||||||||||||| |||||||||||||| || |||||    
T  49494477 agtgaatcatcaacttcgtccctgaatttgcaagcatcaatcaaaatcgtccccaaattttacgaaatatcaatttcatccctgaatttgtaaaatgtca 49494576  T
Q  261 atcaatttagtcctt 275  Q
    |||||||| ||||||    
T  49494577 atcaattttgtcctt 49494591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 40963489 - 40963376
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || ||||||||  || | ||||| ||||||||| || |||||   |||||||| ||  || ||||||||||||| || ||||    
T  40963489 gagtgaatcatcaacttcgtccctgaatttgcatgaatcggtcaaattcgttccccaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtc 40963390  T
Q  260 aatcaatttagtcc 273  Q
    ||||||||||||||    
T  40963389 aatcaatttagtcc 40963376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 198 - 406
Target Start/End: Original strand, 30501155 - 30501363
Alignment:
Q  198 cggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacg 297  Q
    |||||||||||||||| |||||   |||||||||||  || |  |||||||||| || |||||||||||||||||| |  |  |||  ||   |||||||    
T  30501155 cggccaaattcgtcccccaatttaacgaaatatcaaaatagtttctgaatttgtaaaatgtcaatcaatttagtccctccgtccaattggagtgttaacg 30501254  T
Q  298 gggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattga 397  Q
    | ||||||||||| || || |||| |||||||| | |||||  | |||  |||||||||||| |||| |  | || ||||  |||||| |||||||||||    
T  30501255 gtgctgacgtgaccgtcaatctctcacatgtcagatgccacacaagcaaagactaatttggctgatagtgaccaaaatttccaaggacgaaattgattga 30501354  T
Q  398 tttgcagaa 406  Q
    |||||||||    
T  30501355 tttgcagaa 30501363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 18430395 - 18430308
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaat 247  Q
    ||||||| |||||| || || | |||||| | |||| || ||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  18430395 gagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaat 18430308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 53092662 - 53092728
Alignment:
Q  199 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaa 265  Q
    |||||| ||||||||| |||| ||||||||||||| ||||||||||||||| | || ||||||||||    
T  53092662 ggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtcaatcaa 53092728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 2226260 - 2226207
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  2226260 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 2226207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 53190867 - 53190814
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  53190867 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 53190814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 1847458 - 1847418
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaat 496  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  1847458 tcttccccaaatgtataaaattggaaccctaattacacaat 1847418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 51453878 - 51453958
Alignment:
Q  235 ttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgtta 315  Q
    ||||||| | |||||||||| | |||||||| ||||||||| || ||||||||  ||||||||| ||||||||||| ||||    
T  51453878 ttaatccttaaatttgttaaatctcaatcaagttagtccttctgttcaaacggagcgttaacggtgctgacgtgaccgtta 51453958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 45898475 - 45898381
Alignment:
Q  157 attgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||||| |||||| || || |||||||| ||||   ||| |||| || |||||| |||||||||||||||||| ||| ||| |||||||||    
T  45898475 attgagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgt 45898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 21348759 - 21348812
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  21348759 atcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 21348812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 23291606 - 23291659
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| || ||||||||    
T  23291606 atcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 27899189 - 27899136
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  27899189 atcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 27899136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 30600026 - 30599973
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  30600026 atcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 30599973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 35905820 - 35905767
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  35905820 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 35905767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 38193563 - 38193510
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  38193563 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 41944584 - 41944665
Alignment:
Q  168 catcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| || || |||||||| ||| |||||||||||||||||||| |||||   |||||||||||  || |||||||||||    
T  41944584 catcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaattt 41944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 41979405 - 41979352
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  41979405 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 46308843 - 46308896
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  46308843 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 53094326 - 53094273
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  53094326 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 54898473 - 54898526
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  54898473 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 54898526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 24383018 - 24382926
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||||||| |||||| || || | |||||| | |||| |||||||||||| ||| ||||||||| |||||||||| ||| ||| || ||||||    
T  24383018 tgagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgt 24382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 33852744 - 33852705
Alignment:
Q  210 tccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  33852744 tccctcaattatgcgaaatatcaatttaatttctgaattt 33852705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 46611346 - 46611287
Alignment:
Q  206 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaa 265  Q
    ||||||||| |||| ||||||||||||| ||| ||||||||||| | || ||||||||||    
T  46611346 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaa 46611287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 38191934 - 38191984
Alignment:
Q  199 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  38191934 ggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 3150288 - 3150341
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  3150288 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 3152326 - 3152273
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||| |||||||||||    
T  3152326 atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 3152273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 28626447 - 28626524
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||| ||| ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||    
T  28626447 atcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 28626524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 41977786 - 41977839
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||| ||||||| ||||  |||||||||||| ||| |||||||||||    
T  41977786 atcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattt 41977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 44794243 - 44794296
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||| ||||| |||| ||||||||||||| ||| |||||||||||    
T  44794243 atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 44794296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 46310489 - 46310436
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  46310489 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 46609185 - 46609238
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| || |||||||||| ||| |||||||||||    
T  46609185 atcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 53187778 - 53187831
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  53187778 atcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 54900127 - 54900074
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||  |||||||||||    
T  54900127 atcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 504
Target Start/End: Complemental strand, 40963182 - 40963134
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaattacacaatctataatc 504  Q
    |||||||||| | |||||||||||||||||||||  ||||||| |||||    
T  40963182 tcttccccaaatatataaaattggaaccctaattttacaatctttaatc 40963134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 155 - 498
Target Start/End: Complemental strand, 32090021 - 32089677
Alignment:
Q  155 aaattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 254  Q
    |||||||||||||||||||||| || |||||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32090021 aaattgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaa 32089922  T
Q  255 ttgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaat 354  Q
     |||||||||| |||||||||||| ||||||||  ||||||||||||||||| | | |||||||||| |||||||| |||||||||||||||||||||||    
T  32089921 atgtcaatcaagttagtccttatgttcaaacggagcgttaacggggctgacgcggccgttaacctctcacatgtcagacgccacgtaggcagggactaat 32089822  T
Q  355 ttggccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactt 453  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| || ||        | ||||||||||||   |||||||||| ||||||  ||     
T  32089821 ttggccgataataacaaacattttgaaggactaaattgattgatttgtagaaaatgttttggctttcttcccaaatggctcttttcttccccaacagctc 32089722  T
Q  454 tgtcttccccaattgtataaaattggaaccctaattacacaatct 498  Q
    | |||||||||||||||||||||||||||||||||||||||||||    
T  32089721 tttcttccccaattgtataaaattggaaccctaattacacaatct 32089677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 160 - 498
Target Start/End: Original strand, 32835876 - 32836215
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttattaaatgtc 32835975  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | |||||| |  ||||||||||||||||||| | |||||||||| |||||||| |||||||||||||| |||||||||||||    
T  32835976 aatcaagttagtccttcggttcaaacagaacgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcatggactaatttggc 32836075  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  |||||| || ||||||||||||||||||||||||||||         | |||||||||||||  |||||||||| || |||| ||||  ||    
T  32836076 cgataataacaaacacttcgaaggactaaattgattgatttgcagaaaatgttttaactttcttcccaaacggctcttttcttccctaacggcttttgct 32836175  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32836176 tccccaattgtataacattggaaccctaattacacaatct 32836215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 171 - 497
Target Start/End: Original strand, 38176643 - 38176970
Alignment:
Q  171 caacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttag 270  Q
    |||||| || |||||||| ||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |||     
T  38176643 caacttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatatcaatcaagttac 38176742  T
Q  271 tccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattcca 370  Q
    ||||| || ||||||||   |||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||    
T  38176743 tccttctgttcaaacggagtgttaacggggctgacgtgaccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataataaca 38176842  T
Q  371 aacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgt 469  Q
    ||||||| ||||||||||||||||||||||||||||        || |||||||||||||  |||||||||| || |||| || | ||||||||||||||    
T  38176843 aacatttcgaaggactaaattgattgatttgcagaaaatgttttgactttcttcccaaacggctcttttcttccctaacggctctttcttccccaattgt 38176942  T
Q  470 ataaaattggaaccctaattacacaatc 497  Q
    |||| |||||||||||||||||||||||    
T  38176943 ataacattggaaccctaattacacaatc 38176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 171 - 497
Target Start/End: Original strand, 38203867 - 38204194
Alignment:
Q  171 caacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttag 270  Q
    |||||| || |||||||| ||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |||     
T  38203867 caacttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatatcaatcaagttac 38203966  T
Q  271 tccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattcca 370  Q
    ||||| || ||||||||   |||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||    
T  38203967 tccttctgttcaaacggagtgttaacggggctgacgtgaccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataataaca 38204066  T
Q  371 aacattttgaaggactaaattgattgatttgcagaannnnnnnnga-tttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgt 469  Q
    ||||||| ||||||||||||||||||||||||||||        || |||||||||||||  |||||||||| || |||| || | ||||||||||||||    
T  38204067 aacatttcgaaggactaaattgattgatttgcagaaaatgttttgactttcttcccaaacggctcttttcttccctaacggctctttcttccccaattgt 38204166  T
Q  470 ataaaattggaaccctaattacacaatc 497  Q
    |||| |||||||||||||||||||||||    
T  38204167 ataacattggaaccctaattacacaatc 38204194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 158 - 496
Target Start/End: Complemental strand, 40330608 - 40330269
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||||||||||||| || |||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40330608 ttgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatg 40330509  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    | |||||| ||||||||| || ||||||||  ||||||||| ||||||||| | || ||||||| |||||||| ||||||||||||||| ||||||||||    
T  40330508 tgaatcaagttagtccttctgttcaaacggagcgttaacggtgctgacgtggccgtcaacctctcacatgtcagacgccacgtaggcagagactaatttg 40330409  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgt 456  Q
    |||||||||   ||||||||  ||||||||||||||||||||||||| ||        | ||||||||||||||  |||||| || ||| |||||| | |    
T  40330408 gccgataataaaaaacatttcaaaggactaaattgattgatttgcagaaaatgctttggctttcttcccaaacagatcttttattcccctacgactcttt 40330309  T
Q  457 cttccccaattgtataaaattggaaccctaattacacaat 496  Q
    |||| || ||||||||||||||||||||||||||||||||    
T  40330308 cttctcctattgtataaaattggaaccctaattacacaat 40330269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 158 - 495
Target Start/End: Original strand, 35291046 - 35291384
Alignment:
Q  158 ttgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattg 257  Q
    ||||||||||||||||  | || |||||||| |||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  35291046 ttgagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaatttgttaaatg 35291145  T
Q  258 tcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttg 357  Q
    |||||||| ||||||||| || ||||| ||  ||||||||| ||||||||| | |||||||||| |||||||| ||| ||| ||| ||||||||||||||    
T  35291146 tcaatcaagttagtccttctgttcaaatggagcgttaacggagctgacgtggccgttaacctctcacatgtcagacgacacatagacagggactaatttg 35291245  T
Q  358 gccgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgt 456  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||| ||        | |||||||||||||  |||||||||| |||||| ||| | |    
T  35291246 gccgataataacaaacattttgaaggactaaactgattgatttgcagaaaatgtttcggctttcttcccaaacggctcttttcttccccaacaactattt 35291345  T
Q  457 cttccccaattgtataaaattggaaccctaattacacaa 495  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  35291346 cttccccaattgtataaaattgaaaccctgattacacaa 35291384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 156 - 504
Target Start/End: Original strand, 18726561 - 18726907
Alignment:
Q  156 aattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaat 255  Q
    ||||||||||||||||||||| || |||||||| | |||| |   |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||     
T  18726561 aattgagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgttaaa 18726660  T
Q  256 tgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatt 355  Q
    |||||||||| ||||||||   | ||||||||  ||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||||    
T  18726661 tgtcaatcaagttagtcct---gttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatt 18726757  T
Q  356 tggccgataattccaaacattttgaaggactaaattgattgatttgca-gaannnnnnnngatttcttcccaaacaactcttttcttgcccaacgacttt 454  Q
    |  ||||||||  |||||||||||||||||||||||||||||||||||  ||        | |||||| |||||   |||||||||| |||||   || |    
T  18726758 taaccgataataacaaacattttgaaggactaaattgattgatttgcataaaatgttttggctttctttccaaatggctcttttcttccccaatagctct 18726857  T
Q  455 gtcttccccaattgtataaaattggaaccctaattacacaatctataatc 504  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18726858 ttcttccccaattgtataaaattggaaccctaattacacaatctgtaatc 18726907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 160 - 498
Target Start/End: Complemental strand, 33257851 - 33257512
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||| ||||||||||| || |||||||| | |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  33257851 gagtggatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 33257752  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| ||||||||| || ||||||||  |||||||  |||||||||| | ||||||||||  ||||||| |||| |||||||||||||||||||||||    
T  33257751 aatcaagttagtccttctgttcaaacggagcgttaacaaggctgacgtggccgttaacctctcgcatgtcagacgctacgtaggcagggactaatttggc 33257652  T
Q  360 cgataattccaaacattttgaaggactaaattgattgatttgcag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtct 458  Q
    |||||||  |||||||||  ||||||||||||||||||||||||| ||        | ||||||||||||   || |||||||  ||||| ||| | |||    
T  33257651 cgataataacaaacatttctaaggactaaattgattgatttgcagaaaatgttttggctttcttcccaaatggctattttcttcaccaacaactctttct 33257552  T
Q  459 tccccaattgtataaaattggaaccctaattacacaatct 498  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  33257551 tccccaattgtataaaattgtaaccctgattacacaatct 33257512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 202 - 495
Target Start/End: Original strand, 43316822 - 43317116
Alignment:
Q  202 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggc 301  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||  ||||||||| ||    
T  43316822 caaattcatccttcaactatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcgttaacggagc 43316921  T
Q  302 tgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttg 401  Q
    ||||||||| |||||||||| |||||||| ||||||| ||  |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  43316922 tgacgtgaccgttaacctctcacatgtcagacgccacataaacagggactaatttggccgataataacaaacattttgaaggactaaactgattgatttg 43317021  T
Q  402 cag-aannnnnnnngatttcttcccaaacaactcttttcttgcccaacgactttgtcttccccaattgtataaaattggaaccctaattacacaa 495  Q
    ||| ||        | |||||||||||||  |||||||||| |||||||||| | ||||||||||||||||||||||| |||||| |||||||||    
T  43317022 cagaaaatatttcggctttcttcccaaacggctcttttcttccccaacgactatttcttccccaattgtataaaattgaaaccctgattacacaa 43317116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 160 - 397
Target Start/End: Original strand, 42619289 - 42619526
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||||||||| || |||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgtc 42619388  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 359  Q
    |||||| |||||||||  | ||||||||    ||||||||||| ||||| | |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  42619389 aatcaagttagtccttcagttcaaacggagtattaacggggctaacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 42619488  T
Q  360 cgataattccaaacattttgaaggactaaattgattga 397  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  42619489 cgataatgacctaaattttcaaggactaagttgattga 42619526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 12458250 - 12458364
Alignment:
Q  22 agagaatatcattcgcccataacgccttcaccaaggcgttgtcaaacactaagacttgatttccctttttgatcgttaggaagagagttgaaggctcact 121  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12458250 agagactatcattcgcccataacgccttcaccaaggcgttgtcaaacactaagacttgatttccctttttgatcgttaggaagagagttgaaggctcact 12458349  T
Q  122 tagctagcttatagt 136  Q
    |||||||||||||||    
T  12458350 tagctagcttatagt 12458364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 194 - 387
Target Start/End: Original strand, 24232186 - 24232379
Alignment:
Q  194 ggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgtt 293  Q
    |||||||| |||||| | ||||||||||| ||||||||||| ||||  ||||||||||||| |||||||||| ||||| ||| || ||||||    | ||    
T  24232186 ggatcggcaaaattcattcctcaattatgtgaaatatcaatctaatttctgaatttgttaaatgtcaatcaagttagtacttctgttcaaacaaagcatt 24232285  T
Q  294 aacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggacta 387  Q
    ||||||| ||||||| | |||||||||| |||||||| |||||||||| ||| |||||||||||||||||||   |||||||||  ||||||||    
T  24232286 aacggggttgacgtggccgttaacctctcacatgtcagacgccacgtaagcatggactaatttggccgataaaaacaaacatttcaaaggacta 24232379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 38596867 - 38596961
Alignment:
Q  159 tgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 253  Q
    |||||||| |||||| || || | |||||| | | || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  38596867 tgagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtta 38596961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 24498158 - 24498045
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    ||||||||||| ||||| || | ||||||  || ||||||| |||| || |||||||||||||||| | ||||| ||| ||||||||||||| |  ||||    
T  24498158 gagtgaatcattaacttcgtccgtgaatttgcaaggatcggtcaaaatcatccctcaattatgcgataaatcaaattagtccctgaatttgtcatatgtc 24498059  T
Q  260 aatcaatttagtcc 273  Q
    ||||||||||||||    
T  24498058 aatcaatttagtcc 24498045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 253
Target Start/End: Original strand, 35395333 - 35395426
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 253  Q
    ||||||| |||||| ||  | |||||||| ||||   |||||||| |||||||||||||||||||||||||||||||| | |||||||||||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgtta 35395426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 18728726 - 18728635
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || |||||||| ||||   |||||||| ||||||||| |||||||||||||||||| ||| |||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgt 18728635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 354
Target Start/End: Complemental strand, 1344905 - 1344711
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 259  Q
    |||||||||||||| || || ||||||||  || | ||||| |||||| ||||| ||||| | |||||||||||  || ||| ||||||||| || ||||    
T  1344905 gagtgaatcatcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgtaaaatgtc 1344806  T
Q  260 aatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaat 354  Q
    |||||||||||||| |  |  |||| ||   |||||| |  || ||||| | |||||||||| |||||||| | ||||| || ||||||||||||    
T  1344805 aatcaatttagtccctccgtccaaatggaatgttaaccgtacttacgtggccgttaacctctcacatgtcagatgccacataagcagggactaat 1344711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 24496779 - 24496834
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  24496779 atcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgt 24496834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 43318184 - 43318093
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || | |||||| | | || ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 43318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 38178192 - 38178126
Alignment:
Q  185 aattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||| |||||| |||| ||||||| |||||||||||||||||||||||||||| |  ||||||||||    
T  38178192 aattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgt 38178126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 38205416 - 38205350
Alignment:
Q  185 aattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    |||| |||||| |||| ||||||| |||||||||||||||||||||||||||| |  ||||||||||    
T  38205416 aattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgt 38205350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 17574354 - 17574407
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  17574354 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 17574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 32087510 - 32087603
Alignment:
Q  156 aattgagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||| |||||| || || |||||||| |||||  |||  ||| ||||||||| |||||||||||||||||| ||| ||||| |||||    
T  32087510 aattgagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaattt 32087603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 2179823 - 2179876
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| || |||||||| |||||||||||||||||    
T  2179823 atcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattt 2179876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 8541324 - 8541271
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| ||| |||||||    
T  8541324 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 12738789 - 12738736
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||| ||| |||| ||||||||||| ||||| |||||||||||    
T  12738789 atcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 12801612 - 12801559
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||| ||| |||| ||||||||||| ||||| |||||||||||    
T  12801612 atcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 24541300 - 24541247
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  24541300 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 24541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 30463936 - 30463989
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  30463936 atcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 36057701 - 36057648
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||||||||| |||| ||||||||||| |||||  ||||||||||    
T  36057701 atcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattt 36057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 40782264 - 40782187
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  40782264 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 40782187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 35292467 - 35292415
Alignment:
Q  199 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| || ||| |||||||||||||||||||| ||| |||||||||||||    
T  35292467 ggccaaaatcatccttcaattatgcgaaatatcaacttagtccctgaatttgt 35292415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 496
Target Start/End: Complemental strand, 35400494 - 35400462
Alignment:
Q  464 aattgtataaaattggaaccctaattacacaat 496  Q
    |||||||||||||||||||||||||||||||||    
T  35400494 aattgtataaaattggaaccctaattacacaat 35400462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 33256400 - 33256491
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 251  Q
    ||||||| |||||| || || |||||||| | ||   |||||||| ||| ||| |||||||||||||||||||| ||||||  |||||||||    
T  33256400 gagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgt 33256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 18625109 - 18625043
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| |||| |||| || |||||||||||| |||| || |||||||| ||||| |||||||||||    
T  18625109 tgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 18625043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 28813815 - 28813765
Alignment:
Q  199 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  28813815 ggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 34327674 - 34327724
Alignment:
Q  199 ggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||||||| || |||| ||||||||||| ||||| |||||||||||    
T  34327674 ggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattt 34327724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 7267879 - 7267932
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||| ||||||||||| || |||| ||||||||||| ||||| |||||||||||    
T  7267879 atcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattt 7267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 7269499 - 7269446
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| || ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  7269499 atcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

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Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 29620174 - 29620251
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| || ||||||||   || |||||||||| |||||||    
T  29620174 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtcc 29620251  T

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Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 29621869 - 29621816
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||| | ||||||||||| ||| |||||||||||    
T  29621869 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29621816  T

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Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 42473695 - 42473642
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| ||||||||| |||||| |||||||||||  || |||||||||||    
T  42473695 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 42473642  T

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Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 42619571 - 42619616
Alignment:
Q  444 ccaacgactttgtcttccccaattgtataaaattggaaccctaatt 489  Q
    |||||| || | |||||||||| |||||||||||||||||||||||    
T  42619571 ccaacggctatttcttccccaaatgtataaaattggaaccctaatt 42619616  T

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Target: scaffold0477 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 6758 - 6669
Alignment:
Q  160 gagtgaatcatcaacttagttcctgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 6669  T

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Target: scaffold1041 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 216 - 406
Target Start/End: Complemental strand, 2926 - 2736
Alignment:
Q  216 aattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgtta 315  Q
    ||||||| |||||| ||||||||||| ||||||||| || ||||| |||| ||||||||| |  |||| |||   ||||| || ||| |||||   ||||    
T  2926 aattatgagaaataacaatttaatccttgaatttgtcaaatgtcattcaagttagtccttctattcaaccggagtgttaatggtgctaacgtggtcgtta 2827  T
Q  316 acctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    |||| | |||||||| ||||||| ||||||| |||||||||||||||||||   ||||||||  |||||| | |||||||||||| |||||    
T  2826 acctttcacatgtcagacgccacataggcagtgactaatttggccgataataataaacatttcaaaggaccatattgattgatttacagaa 2736  T

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Target: scaffold1041; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 378
Target Start/End: Original strand, 2121 - 2308
Alignment:
Q  183 tgaattatcacggatcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtccttatggtca 282  Q
    |||||| | ||| |||| |||||||| |||||||||||||||||||||||| ||||||||| ||||||| |   ||||||||| |||||| || || |      
T  2121 tgaatttttacgcatcgaccaaattcatccctcaattatgcgaaatatcaacttaatccctaaatttgtcagacgtcaatcaagttagtctttttgtt-- 2218  T
Q  283 aacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaatttggccgataattccaaacatttt 378  Q
      |||| ||||||||| |||||||||   |||||||    |||||| | ||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  2219 --cggggcgttaacggtgctgacgtggtcgttaacc----acatgttagacgccacataggcagagactaatttggccgataataacaaacatttt 2308  T

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Target: scaffold0070 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 406
Target Start/End: Original strand, 57498 - 57643
Alignment:
Q  257 gtcaatcaatttagtccttatggtcaaacgggccgttaacggggctgacgtgactgttaacctcttacatgtcatacgccacgtaggcagggactaattt 356  Q
    ||||||||| |||||| || || |||| |||| ||||||||| |||||||||   |||||||    |||||| | ||||||| ||||||| |||||||||    
T  57498 gtcaatcaagttagtctttctgttcaatcggggcgttaacggtgctgacgtggtcgttaacc----acatgttagacgccacataggcagagactaattt 57593  T
Q  357 ggccgataattccaaacattttgaaggactaaattgattgatttgcagaa 406  Q
    ||||||||||  |||||||||  ||  || ||||||||||||||| ||||    
T  57594 ggccgataataacaaacatttcaaataaccaaattgattgatttgtagaa 57643  T

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Target: scaffold1712 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 1018 - 1095
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    |||||| || ||||||||| |||||| |||||||||||  || |||||||||||   || |||||||||| |||||||    
T  1018 atcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 1095  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 54311 - 54234
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatttagtcc 273  Q
    ||||| ||| ||||||||| |||| | ||||||||||| ||| |||||||||||   || |||||||||| |||||||    
T  54311 atcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 54234  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 3330 - 3383
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| || |||||| |||| ||||||||||||| ||| |||||||||||    
T  3330 atcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 3383  T

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Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 4502 - 4555
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    ||||||||| || |||||| |||| ||||||||||||| ||| |||||||||||    
T  4502 atcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 4555  T

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Target: scaffold0058; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 14396 - 14343
Alignment:
Q  196 atcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 249  Q
    |||||| || ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  14396 atcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 489
Target Start/End: Complemental strand, 38082 - 38049
Alignment:
Q  456 tcttccccaattgtataaaattggaaccctaatt 489  Q
    |||||||||| |||||||||||||||||||||||    
T  38082 tcttccccaaatgtataaaattggaaccctaatt 38049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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