View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3892_low_130 (Length: 237)

Name: NF3892_low_130
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3892_low_130
NF3892_low_130
[»] chr3 (82 HSPs)
chr3 (25-199)||(51315625-51315801)
chr3 (31-193)||(44585933-44586097)
chr3 (23-130)||(44436537-44436645)
chr3 (24-161)||(28712490-28712628)
chr3 (23-126)||(86644-86748)
chr3 (23-117)||(33329756-33329851)
chr3 (23-116)||(7218290-7218384)
chr3 (83-197)||(28712662-28712776)
chr3 (25-130)||(48348400-48348505)
chr3 (72-198)||(28204478-28204604)
chr3 (37-117)||(44624704-44624784)
chr3 (139-199)||(46226944-46227004)
chr3 (83-199)||(38958045-38958160)
chr3 (23-195)||(1814696-1814866)
chr3 (84-198)||(3192983-3193097)
chr3 (23-130)||(3916496-3916604)
chr3 (31-196)||(54719144-54719309)
chr3 (23-117)||(578552-578647)
chr3 (23-117)||(8024921-8025016)
chr3 (23-78)||(12759647-12759702)
chr3 (23-117)||(25843445-25843540)
chr3 (72-193)||(43747282-43747405)
chr3 (139-197)||(54718993-54719051)
chr3 (84-198)||(14349313-14349424)
chr3 (76-195)||(19404399-19404517)
chr3 (138-198)||(86820-86880)
chr3 (84-196)||(14856546-14856659)
chr3 (23-130)||(43747419-43747527)
chr3 (72-195)||(27178141-27178264)
chr3 (37-195)||(54464163-54464323)
chr3 (138-196)||(33329611-33329669)
chr3 (84-197)||(17773169-17773282)
chr3 (84-197)||(19074470-19074583)
chr3 (38-119)||(53184587-53184668)
chr3 (23-130)||(36677650-36677758)
chr3 (23-130)||(36687730-36687838)
chr3 (76-172)||(578438-578533)
chr3 (23-196)||(3192774-3192948)
chr3 (148-199)||(28944231-28944282)
chr3 (84-198)||(25154382-25154497)
chr3 (25-114)||(38177259-38177349)
chr3 (148-202)||(48348249-48348303)
chr3 (72-199)||(4474257-4474384)
chr3 (46-207)||(44433226-44433391)
chr3 (23-114)||(19404533-19404625)
chr3 (30-117)||(36567020-36567108)
chr3 (139-199)||(36677521-36677581)
chr3 (139-199)||(36687603-36687663)
chr3 (23-130)||(47189733-47189841)
chr3 (37-115)||(4474150-4474228)
chr3 (138-197)||(20432189-20432248)
chr3 (31-114)||(25154263-25154348)
chr3 (138-197)||(25902609-25902668)
chr3 (23-126)||(52008313-52008419)
chr3 (84-196)||(53184719-53184831)
chr3 (24-117)||(46226777-46226871)
chr3 (51-97)||(49002609-49002655)
chr3 (148-197)||(14340732-14340781)
chr3 (23-130)||(20432323-20432432)
chr3 (25-117)||(27178288-27178381)
chr3 (66-130)||(38957913-38957978)
chr3 (138-199)||(42686479-42686540)
chr3 (23-130)||(28204625-28204733)
chr3 (24-114)||(1938399-1938490)
chr3 (26-97)||(2205670-2205741)
chr3 (138-197)||(12759502-12759561)
chr3 (79-130)||(15978888-15978939)
chr3 (72-130)||(28944095-28944154)
chr3 (51-113)||(49787334-49787397)
chr3 (26-119)||(25782794-25782888)
chr3 (138-196)||(38177178-38177236)
chr3 (84-130)||(44436455-44436501)
chr3 (75-205)||(22494544-22494674)
chr3 (38-126)||(35359067-35359156)
chr3 (85-195)||(47189599-47189708)
chr3 (84-117)||(51315574-51315607)
chr3 (139-199)||(3354942-3355002)
chr3 (26-97)||(10864215-10864287)
chr3 (30-117)||(28097569-28097657)
chr3 (30-97)||(45743999-45744067)
chr3 (139-207)||(49002758-49002826)
chr3 (139-199)||(54476040-54476100)
[»] chr6 (47 HSPs)
chr6 (25-199)||(10727335-10727511)
chr6 (23-197)||(30349348-30349523)
chr6 (22-195)||(6036798-6036971)
chr6 (37-118)||(3812819-3812900)
chr6 (38-198)||(33399784-33399944)
chr6 (84-203)||(3579588-3579707)
chr6 (72-197)||(12766403-12766529)
chr6 (84-193)||(1377409-1377517)
chr6 (84-193)||(1385157-1385265)
chr6 (23-114)||(266251-266342)
chr6 (84-199)||(238927-239040)
chr6 (23-128)||(5003218-5003324)
chr6 (32-193)||(239093-239256)
chr6 (23-114)||(32143341-32143433)
chr6 (51-207)||(2853582-2853741)
chr6 (72-196)||(33401242-33401367)
chr6 (30-114)||(26311550-26311635)
chr6 (138-203)||(30349612-30349677)
chr6 (26-129)||(1377275-1377379)
chr6 (26-129)||(1385023-1385127)
chr6 (41-114)||(2840965-2841039)
chr6 (138-196)||(6036644-6036702)
chr6 (37-117)||(26601540-26601621)
chr6 (83-199)||(28011326-28011441)
chr6 (30-114)||(30965774-30965859)
chr6 (84-176)||(32143452-32143545)
chr6 (72-172)||(2853453-2853553)
chr6 (84-199)||(10727187-10727303)
chr6 (37-115)||(17248718-17248797)
chr6 (30-79)||(11351754-11351803)
chr6 (87-189)||(18030944-18031043)
chr6 (23-95)||(18031081-18031154)
chr6 (84-196)||(266122-266234)
chr6 (139-199)||(2203184-2203244)
chr6 (30-129)||(11277694-11277794)
chr6 (23-114)||(17532334-17532425)
chr6 (84-192)||(20474906-20475014)
chr6 (146-201)||(5003084-5003139)
chr6 (150-192)||(26601727-26601769)
chr6 (149-194)||(8223762-8223807)
chr6 (139-196)||(22517490-22517547)
chr6 (49-97)||(29874368-29874417)
chr6 (139-195)||(2164714-2164770)
chr6 (139-195)||(2176347-2176403)
chr6 (66-117)||(11623299-11623351)
chr6 (149-197)||(12798726-12798774)
chr6 (37-73)||(28563472-28563508)
[»] chr1 (87 HSPs)
chr1 (23-197)||(3377500-3377676)
chr1 (32-194)||(18632319-18632481)
chr1 (30-195)||(16874649-16874816)
chr1 (25-193)||(12960986-12961155)
chr1 (30-199)||(45738933-45739103)
chr1 (28-117)||(41997785-41997875)
chr1 (23-197)||(17760681-17760859)
chr1 (23-196)||(14978797-14978971)
chr1 (23-126)||(16298196-16298300)
chr1 (23-130)||(49426132-49426239)
chr1 (23-185)||(44672326-44672487)
chr1 (37-117)||(8301498-8301579)
chr1 (84-194)||(23891662-23891772)
chr1 (23-115)||(50226530-50226623)
chr1 (23-192)||(25486217-25486388)
chr1 (30-130)||(50401438-50401538)
chr1 (23-117)||(30849369-30849464)
chr1 (25-114)||(23220649-23220739)
chr1 (25-130)||(39642349-39642455)
chr1 (25-129)||(46505311-46505416)
chr1 (24-117)||(46572906-46572998)
chr1 (88-197)||(46573032-46573142)
chr1 (46-129)||(8009796-8009880)
chr1 (23-130)||(15659130-15659238)
chr1 (149-201)||(25486479-25486531)
chr1 (23-130)||(44436824-44436931)
chr1 (85-196)||(3377714-3377825)
chr1 (139-197)||(39642199-39642257)
chr1 (72-196)||(14978989-14979114)
chr1 (46-194)||(23891797-23891942)
chr1 (143-199)||(25085396-25085452)
chr1 (139-199)||(41915779-41915839)
chr1 (39-130)||(1853610-1853699)
chr1 (23-113)||(25085532-25085623)
chr1 (37-114)||(6569660-6569738)
chr1 (84-199)||(41997637-41997752)
chr1 (38-115)||(46880896-46880974)
chr1 (148-197)||(3612454-3612503)
chr1 (37-198)||(17692725-17692886)
chr1 (30-113)||(14190688-14190772)
chr1 (89-185)||(27864185-27864280)
chr1 (139-195)||(42924329-42924385)
chr1 (84-193)||(45739137-45739244)
chr1 (37-115)||(1096549-1096628)
chr1 (138-197)||(17760947-17761006)
chr1 (32-129)||(16545628-16545726)
chr1 (148-194)||(18632605-18632651)
chr1 (88-199)||(23220767-23220878)
chr1 (25-114)||(46912332-46912422)
chr1 (30-117)||(6320643-6320729)
chr1 (66-194)||(3612107-3612235)
chr1 (139-195)||(5287831-5287887)
chr1 (23-83)||(7061367-7061427)
chr1 (25-77)||(7579785-7579837)
chr1 (139-195)||(37008218-37008274)
chr1 (139-198)||(367176-367235)
chr1 (139-198)||(3814758-3814817)
chr1 (139-198)||(3815053-3815112)
chr1 (31-113)||(5287374-5287457)
chr1 (23-86)||(7060778-7060841)
chr1 (139-194)||(12074958-12075013)
chr1 (84-115)||(14190629-14190660)
chr1 (138-197)||(50226391-50226450)
chr1 (142-197)||(51250484-51250539)
chr1 (72-117)||(6320769-6320815)
chr1 (143-193)||(16874511-16874561)
chr1 (138-196)||(32295209-32295267)
chr1 (48-78)||(36820290-36820320)
chr1 (143-197)||(46895801-46895855)
chr1 (146-196)||(48319670-48319719)
chr1 (139-189)||(51251382-51251431)
chr1 (139-196)||(2350093-2350150)
chr1 (138-199)||(5287247-5287308)
chr1 (142-199)||(10532212-10532269)
chr1 (148-193)||(11050432-11050476)
chr1 (143-192)||(23953111-23953160)
chr1 (138-199)||(27864413-27864474)
chr1 (147-196)||(46895437-46895486)
chr1 (148-193)||(46912193-46912238)
chr1 (26-97)||(6183082-6183154)
chr1 (138-210)||(18216672-18216744)
chr1 (30-97)||(21727712-21727780)
chr1 (30-97)||(33811525-33811593)
chr1 (30-117)||(34988170-34988258)
chr1 (30-97)||(39427511-39427579)
chr1 (23-87)||(48319514-48319578)
chr1 (139-207)||(50503690-50503758)
[»] chr8 (75 HSPs)
chr8 (23-197)||(23702274-23702449)
chr8 (25-199)||(27545341-27545512)
chr8 (25-199)||(20853375-20853549)
chr8 (23-196)||(45177201-45177376)
chr8 (23-199)||(41487349-41487526)
chr8 (25-198)||(30539132-30539306)
chr8 (30-196)||(6807315-6807480)
chr8 (31-115)||(3676275-3676360)
chr8 (73-200)||(26824023-26824149)
chr8 (40-130)||(37813247-37813338)
chr8 (86-197)||(41487199-41487311)
chr8 (37-194)||(26823828-26823987)
chr8 (84-197)||(17070906-17071019)
chr8 (84-197)||(17577253-17577366)
chr8 (45-117)||(37939991-37940063)
chr8 (23-130)||(16982750-16982857)
chr8 (30-197)||(29044693-29044860)
chr8 (72-199)||(6807170-6807296)
chr8 (37-130)||(21486721-21486815)
chr8 (38-126)||(14880406-14880495)
chr8 (72-199)||(39889769-39889897)
chr8 (25-114)||(44101431-44101520)
chr8 (23-130)||(25144009-25144117)
chr8 (31-196)||(36688153-36688311)
chr8 (72-193)||(27545544-27545666)
chr8 (30-114)||(33298422-33298507)
chr8 (138-198)||(28349563-28349623)
chr8 (84-197)||(35213030-35213141)
chr8 (91-200)||(33298545-33298651)
chr8 (138-205)||(37263349-37263416)
chr8 (31-197)||(521591-521757)
chr8 (89-196)||(20228231-20228338)
chr8 (30-115)||(39889919-39890005)
chr8 (138-191)||(22192307-22192360)
chr8 (37-199)||(32071168-32071328)
chr8 (25-130)||(29657770-29657877)
chr8 (138-197)||(37813161-37813220)
chr8 (85-176)||(14880537-14880628)
chr8 (25-114)||(22846526-22846616)
chr8 (139-193)||(25896993-25897047)
chr8 (139-193)||(26889648-26889702)
chr8 (149-199)||(41602878-41602928)
chr8 (138-199)||(7010920-7010981)
chr8 (138-195)||(32768505-32768562)
chr8 (26-97)||(5734326-5734398)
chr8 (30-97)||(8834084-8834152)
chr8 (143-199)||(9498906-9498962)
chr8 (23-114)||(9762283-9762375)
chr8 (138-198)||(16982624-16982684)
chr8 (37-116)||(22192451-22192531)
chr8 (138-198)||(23702121-23702181)
chr8 (26-129)||(27339611-27339715)
chr8 (26-73)||(4132879-4132926)
chr8 (148-199)||(18092908-18092959)
chr8 (30-73)||(41693185-41693228)
chr8 (138-197)||(44269373-44269432)
chr8 (139-197)||(755902-755960)
chr8 (37-87)||(25897080-25897129)
chr8 (145-199)||(29657961-29658015)
chr8 (84-130)||(30539055-30539101)
chr8 (143-196)||(9762460-9762513)
chr8 (139-204)||(17512089-17512154)
chr8 (23-115)||(29790839-29790932)
chr8 (23-64)||(37263493-37263534)
chr8 (139-199)||(5180692-5180752)
chr8 (30-129)||(6745139-6745239)
chr8 (30-97)||(8287749-8287817)
chr8 (149-201)||(25144207-25144259)
chr8 (26-129)||(30845622-30845726)
chr8 (30-97)||(37205686-37205754)
chr8 (37-77)||(41567088-41567128)
chr8 (30-97)||(41574255-41574323)
chr8 (43-114)||(44269278-44269350)
chr8 (47-117)||(45457153-45457225)
chr8 (139-199)||(45515930-45515990)
[»] chr2 (77 HSPs)
chr2 (25-198)||(5470478-5470651)
chr2 (23-196)||(39918434-39918609)
chr2 (23-197)||(44617878-44618052)
chr2 (23-130)||(37431610-37431718)
chr2 (23-197)||(34679096-34679272)
chr2 (23-197)||(14489213-14489388)
chr2 (31-197)||(43028793-43028960)
chr2 (84-199)||(14489413-14489527)
chr2 (25-200)||(31827521-31827699)
chr2 (25-130)||(34760914-34761020)
chr2 (25-115)||(5008429-5008520)
chr2 (72-201)||(15023026-15023157)
chr2 (84-196)||(34679294-34679404)
chr2 (84-193)||(6510201-6510310)
chr2 (25-198)||(6592722-6592899)
chr2 (39-130)||(32969624-32969716)
chr2 (23-117)||(6510080-6510174)
chr2 (85-196)||(18709247-18709356)
chr2 (23-196)||(4576682-4576854)
chr2 (84-194)||(4925648-4925755)
chr2 (23-130)||(5362314-5362423)
chr2 (25-161)||(2609230-2609367)
chr2 (23-130)||(8553683-8553790)
chr2 (38-117)||(25411621-25411701)
chr2 (23-130)||(27489499-27489607)
chr2 (72-196)||(31827721-31827845)
chr2 (83-199)||(34761060-34761177)
chr2 (84-193)||(37431739-37431848)
chr2 (23-117)||(24472586-24472681)
chr2 (84-199)||(6592935-6593049)
chr2 (84-201)||(27489637-27489760)
chr2 (23-196)||(37803118-37803297)
chr2 (72-193)||(5470333-5470453)
chr2 (66-196)||(16043204-16043339)
chr2 (25-197)||(14943686-14943858)
chr2 (30-117)||(25333578-25333666)
chr2 (84-193)||(35718857-35718966)
chr2 (23-117)||(4925519-4925614)
chr2 (30-119)||(18709401-18709491)
chr2 (72-196)||(19895613-19895739)
chr2 (139-200)||(12948885-12948946)
chr2 (84-198)||(19206140-19206253)
chr2 (138-199)||(20650367-20650428)
chr2 (26-110)||(35718732-35718817)
chr2 (139-196)||(36176981-36177038)
chr2 (23-87)||(24306158-24306222)
chr2 (26-73)||(7464080-7464127)
chr2 (139-198)||(14816054-14816113)
chr2 (138-197)||(21358361-21358420)
chr2 (72-193)||(4576546-4576669)
chr2 (138-200)||(25375129-25375191)
chr2 (138-196)||(37803388-37803446)
chr2 (83-193)||(43028994-43029104)
chr2 (84-199)||(44297560-44297674)
chr2 (149-198)||(32969794-32969843)
chr2 (138-198)||(5362173-5362233)
chr2 (69-197)||(12949203-12949332)
chr2 (31-79)||(36195726-36195774)
chr2 (23-114)||(41196369-41196461)
chr2 (138-197)||(25379-25438)
chr2 (25-117)||(15022917-15023011)
chr2 (42-116)||(32013218-32013293)
chr2 (30-73)||(40711482-40711525)
chr2 (23-116)||(8857127-8857221)
chr2 (138-176)||(14943556-14943594)
chr2 (23-77)||(19399316-19399370)
chr2 (139-197)||(25333749-25333807)
chr2 (143-197)||(36177351-36177405)
chr2 (143-196)||(4856709-4856762)
chr2 (148-197)||(19399441-19399490)
chr2 (86-130)||(8857250-8857294)
chr2 (139-195)||(19399183-19399239)
chr2 (31-114)||(19895761-19895845)
chr2 (140-176)||(28851674-28851710)
chr2 (30-97)||(34123341-34123409)
chr2 (139-199)||(35500348-35500408)
chr2 (30-117)||(40493726-40493814)
[»] chr5 (74 HSPs)
chr5 (23-206)||(39574229-39574410)
chr5 (23-193)||(31080480-31080651)
chr5 (25-194)||(37897859-37898029)
chr5 (23-199)||(27904622-27904800)
chr5 (21-196)||(3333838-3334015)
chr5 (23-130)||(9852853-9852961)
chr5 (30-198)||(24405488-24405657)
chr5 (23-197)||(35166296-35166470)
chr5 (23-194)||(20629883-20630057)
chr5 (23-197)||(36798169-36798345)
chr5 (26-117)||(2974713-2974805)
chr5 (84-199)||(35166494-35166610)
chr5 (25-197)||(40276170-40276345)
chr5 (23-96)||(6130397-6130470)
chr5 (84-193)||(3999089-3999198)
chr5 (23-117)||(12406179-12406274)
chr5 (23-113)||(26702519-26702610)
chr5 (23-113)||(26972252-26972343)
chr5 (84-204)||(32391711-32391831)
chr5 (23-196)||(32391858-32392033)
chr5 (84-199)||(2974834-2974951)
chr5 (84-200)||(12406037-12406153)
chr5 (45-193)||(19131661-19131809)
chr5 (23-195)||(43098166-43098337)
chr5 (23-129)||(20512264-20512371)
chr5 (23-116)||(3999237-3999331)
chr5 (37-130)||(18403053-18403147)
chr5 (23-197)||(22300600-22300775)
chr5 (23-115)||(25910805-25910898)
chr5 (84-197)||(36798377-36798491)
chr5 (84-193)||(3333695-3333804)
chr5 (84-193)||(19340767-19340873)
chr5 (139-198)||(42585984-42586043)
chr5 (138-193)||(43098031-43098086)
chr5 (23-116)||(19340903-19340997)
chr5 (138-199)||(20629733-20629794)
chr5 (23-115)||(24779355-24779448)
chr5 (139-200)||(36361029-36361090)
chr5 (139-199)||(6464332-6464392)
chr5 (139-199)||(20364679-20364739)
chr5 (139-199)||(22408803-22408863)
chr5 (84-197)||(16132930-16133045)
chr5 (145-196)||(40132904-40132955)
chr5 (143-197)||(20512460-20512514)
chr5 (147-196)||(586677-586726)
chr5 (138-199)||(24779530-24779591)
chr5 (37-117)||(25363905-25363986)
chr5 (149-194)||(25910992-25911037)
chr5 (84-129)||(30603680-30603725)
chr5 (84-197)||(40276017-40276131)
chr5 (23-114)||(28446087-28446179)
chr5 (30-129)||(28736508-28736608)
chr5 (138-198)||(34319958-34320017)
chr5 (143-195)||(35877540-35877592)
chr5 (30-97)||(4096552-4096619)
chr5 (31-117)||(16132824-16132911)
chr5 (138-197)||(18403246-18403304)
chr5 (139-198)||(20126436-20126495)
chr5 (148-199)||(26562987-26563038)
chr5 (24-110)||(26563075-26563162)
chr5 (26-73)||(35678225-35678272)
chr5 (26-73)||(39528891-39528938)
chr5 (139-193)||(25364082-25364136)
chr5 (72-117)||(28446192-28446238)
chr5 (144-206)||(31156874-31156936)
chr5 (143-193)||(40133140-40133190)
chr5 (84-117)||(6130334-6130367)
chr5 (84-129)||(21066541-21066586)
chr5 (139-176)||(24242037-24242074)
chr5 (30-97)||(10029217-10029285)
chr5 (26-97)||(13960831-13960903)
chr5 (85-117)||(22300814-22300846)
chr5 (30-117)||(42739732-42739820)
chr5 (26-97)||(42947501-42947573)
[»] chr7 (76 HSPs)
chr7 (55-197)||(28350115-28350259)
chr7 (23-198)||(15107131-15107305)
chr7 (23-129)||(44312882-44312988)
chr7 (46-176)||(28350307-28350436)
chr7 (25-195)||(28472391-28472560)
chr7 (37-198)||(41243642-41243803)
chr7 (23-117)||(36903342-36903437)
chr7 (43-194)||(47909696-47909848)
chr7 (84-197)||(4049923-4050036)
chr7 (30-196)||(6726401-6726573)
chr7 (21-192)||(21505755-21505927)
chr7 (72-196)||(36580274-36580399)
chr7 (25-118)||(4049787-4049882)
chr7 (138-201)||(23826278-23826341)
chr7 (72-196)||(44312745-44312869)
chr7 (30-193)||(18186597-18186763)
chr7 (24-197)||(15347953-15348124)
chr7 (50-129)||(17876237-17876317)
chr7 (84-193)||(20185118-20185226)
chr7 (23-130)||(28785894-28786002)
chr7 (23-199)||(35250116-35250293)
chr7 (23-196)||(15029058-15029235)
chr7 (23-130)||(18504310-18504418)
chr7 (138-198)||(45697485-45697545)
chr7 (72-193)||(35250307-35250427)
chr7 (139-197)||(18504496-18504554)
chr7 (42-130)||(23826086-23826175)
chr7 (72-175)||(5172711-5172818)
chr7 (84-197)||(14247293-14247406)
chr7 (72-197)||(15348145-15348273)
chr7 (86-199)||(19645006-19645118)
chr7 (139-199)||(21939331-21939391)
chr7 (31-201)||(5172506-5172678)
chr7 (28-114)||(19644885-19644972)
chr7 (138-201)||(20505093-20505156)
chr7 (24-130)||(36580415-36580522)
chr7 (25-114)||(8073957-8074047)
chr7 (143-197)||(11373846-11373900)
chr7 (150-196)||(21748082-21748128)
chr7 (46-130)||(3381929-3382013)
chr7 (84-197)||(17876359-17876472)
chr7 (23-87)||(29834290-29834354)
chr7 (138-193)||(9500158-9500213)
chr7 (138-197)||(46266509-46266568)
chr7 (138-196)||(6726258-6726315)
chr7 (41-199)||(14247462-14247617)
chr7 (32-198)||(17931878-17932042)
chr7 (138-176)||(24432978-24433016)
chr7 (138-199)||(6792052-6792113)
chr7 (149-194)||(8074142-8074187)
chr7 (140-197)||(28785755-28785812)
chr7 (85-196)||(41243845-41243958)
chr7 (68-193)||(48058864-48058990)
chr7 (139-199)||(327435-327495)
chr7 (143-195)||(3247432-3247484)
chr7 (46-130)||(11374130-11374214)
chr7 (149-193)||(23746161-23746205)
chr7 (139-198)||(282858-282917)
chr7 (144-194)||(15029308-15029356)
chr7 (150-197)||(21505614-21505661)
chr7 (72-130)||(36903459-36903518)
chr7 (30-73)||(45231665-45231708)
chr7 (148-199)||(45718137-45718188)
chr7 (23-113)||(23745976-23746065)
chr7 (50-115)||(45717980-45718046)
chr7 (138-199)||(20184913-20184974)
chr7 (139-196)||(20505266-20505323)
chr7 (25-97)||(25987063-25987136)
chr7 (84-117)||(28472580-28472613)
chr7 (139-199)||(3318315-3318375)
chr7 (34-97)||(10312376-10312440)
chr7 (21-73)||(16879361-16879413)
chr7 (139-199)||(25780070-25780130)
chr7 (26-97)||(35437306-35437378)
chr7 (26-97)||(38053246-38053318)
chr7 (148-196)||(48059212-48059260)
[»] chr4 (102 HSPs)
chr4 (23-197)||(12719584-12719761)
chr4 (23-198)||(44356537-44356712)
chr4 (25-197)||(23759715-23759888)
chr4 (37-206)||(2016781-2016952)
chr4 (23-197)||(2654108-2654283)
chr4 (23-196)||(14449423-14449599)
chr4 (23-117)||(43074727-43074822)
chr4 (24-199)||(1420684-1420861)
chr4 (37-196)||(10059850-10060013)
chr4 (30-197)||(21451458-21451625)
chr4 (23-193)||(27978695-27978866)
chr4 (23-196)||(20112289-20112463)
chr4 (25-199)||(53312283-53312460)
chr4 (23-199)||(54855301-54855478)
chr4 (23-202)||(2836893-2837074)
chr4 (23-114)||(4796179-4796271)
chr4 (72-200)||(53924743-53924872)
chr4 (23-197)||(25909486-25909662)
chr4 (37-193)||(51362539-51362700)
chr4 (31-117)||(11824268-11824354)
chr4 (23-117)||(29697602-29697696)
chr4 (23-193)||(50769366-50769538)
chr4 (21-97)||(6614981-6615056)
chr4 (23-130)||(6637202-6637310)
chr4 (84-197)||(35383764-35383874)
chr4 (23-117)||(21597541-21597636)
chr4 (39-194)||(21871542-21871696)
chr4 (39-194)||(21927403-21927557)
chr4 (37-113)||(20118056-20118133)
chr4 (23-95)||(35393402-35393475)
chr4 (72-198)||(6614845-6614970)
chr4 (72-196)||(50769551-50769675)
chr4 (84-197)||(53312488-53312600)
chr4 (23-207)||(53924890-53925075)
chr4 (72-193)||(3658112-3658235)
chr4 (138-193)||(14449276-14449331)
chr4 (23-86)||(18937379-18937442)
chr4 (24-130)||(31553382-31553489)
chr4 (148-199)||(35393935-35393986)
chr4 (138-197)||(43074615-43074674)
chr4 (23-97)||(49185669-49185744)
chr4 (84-192)||(14060760-14060867)
chr4 (54-199)||(14060873-14061020)
chr4 (139-197)||(21957538-21957596)
chr4 (72-197)||(23759560-23759686)
chr4 (23-115)||(34567755-34567848)
chr4 (143-196)||(43074827-43074880)
chr4 (25-197)||(51371463-51371636)
chr4 (86-194)||(1420537-1420645)
chr4 (141-196)||(2653953-2654008)
chr4 (23-114)||(26089553-26089644)
chr4 (138-193)||(37831595-37831650)
chr4 (138-197)||(37832953-37833012)
chr4 (72-187)||(6637075-6637190)
chr4 (40-117)||(8965672-8965750)
chr4 (84-199)||(16292469-16292584)
chr4 (143-197)||(19909172-19909226)
chr4 (138-196)||(49185571-49185628)
chr4 (138-199)||(51362796-51362857)
chr4 (148-197)||(51371729-51371778)
chr4 (150-195)||(54983849-54983894)
chr4 (138-198)||(4796034-4796094)
chr4 (23-110)||(8070712-8070800)
chr4 (138-194)||(14016722-14016778)
chr4 (139-195)||(35615315-35615371)
chr4 (30-97)||(41707818-41707886)
chr4 (72-115)||(51362727-51362771)
chr4 (23-114)||(52462927-52463019)
chr4 (30-129)||(54606955-54607055)
chr4 (23-130)||(54983972-54984080)
chr4 (148-199)||(2017054-2017105)
chr4 (72-196)||(6207176-6207303)
chr4 (28-130)||(6207318-6207421)
chr4 (30-116)||(21322857-21322944)
chr4 (148-195)||(21957733-21957780)
chr4 (26-73)||(35083722-35083769)
chr4 (139-197)||(3369846-3369904)
chr4 (148-198)||(11824464-11824514)
chr4 (148-194)||(35615434-35615479)
chr4 (30-96)||(51233582-51233648)
chr4 (38-83)||(2181233-2181278)
chr4 (51-96)||(6033780-6033825)
chr4 (72-130)||(11824383-11824443)
chr4 (84-117)||(18937320-18937353)
chr4 (85-118)||(21871458-21871491)
chr4 (85-118)||(21927319-21927352)
chr4 (148-197)||(29697787-29697836)
chr4 (23-76)||(42526102-42526155)
chr4 (84-116)||(2654035-2654067)
chr4 (149-193)||(4411493-4411537)
chr4 (167-199)||(4796323-4796355)
chr4 (30-97)||(5344370-5344438)
chr4 (30-97)||(7666343-7666411)
chr4 (30-129)||(7705658-7705758)
chr4 (139-195)||(8144383-8144439)
chr4 (30-129)||(20472617-20472717)
chr4 (47-87)||(29775471-29775511)
chr4 (139-199)||(41148162-41148222)
chr4 (138-194)||(49185815-49185870)
chr4 (26-97)||(52045857-52045929)
chr4 (26-97)||(54216098-54216170)
chr4 (26-97)||(55586716-55586788)
[»] scaffold0809 (2 HSPs)
scaffold0809 (30-198)||(2907-3073)
scaffold0809 (72-130)||(2819-2879)
[»] scaffold0011 (2 HSPs)
scaffold0011 (23-185)||(145364-145528)
scaffold0011 (84-130)||(145556-145602)
[»] scaffold0015 (1 HSPs)
scaffold0015 (23-117)||(76942-77036)
[»] scaffold0062 (2 HSPs)
scaffold0062 (84-197)||(46075-46189)
scaffold0062 (23-129)||(46214-46321)
[»] scaffold0248 (2 HSPs)
scaffold0248 (37-193)||(405-564)
scaffold0248 (138-195)||(666-723)
[»] scaffold0372 (1 HSPs)
scaffold0372 (30-197)||(123-290)
[»] scaffold0328 (1 HSPs)
scaffold0328 (23-193)||(9415-9586)
[»] scaffold0578 (1 HSPs)
scaffold0578 (28-115)||(3157-3245)
[»] scaffold0150 (1 HSPs)
scaffold0150 (50-126)||(9703-9779)
[»] scaffold0194 (2 HSPs)
scaffold0194 (31-130)||(25047-25146)
scaffold0194 (148-189)||(24900-24941)
[»] scaffold0137 (1 HSPs)
scaffold0137 (37-115)||(19995-20074)
[»] scaffold1458 (1 HSPs)
scaffold1458 (138-198)||(1469-1529)
[»] scaffold0515 (1 HSPs)
scaffold0515 (138-198)||(3637-3697)
[»] scaffold0306 (1 HSPs)
scaffold0306 (138-198)||(3637-3697)
[»] scaffold0417 (2 HSPs)
scaffold0417 (84-198)||(9537-9653)
scaffold0417 (24-95)||(9439-9511)
[»] scaffold0166 (2 HSPs)
scaffold0166 (23-115)||(21738-21831)
scaffold0166 (138-199)||(21913-21974)
[»] scaffold0735 (1 HSPs)
scaffold0735 (139-195)||(6061-6117)
[»] scaffold0025 (2 HSPs)
scaffold0025 (141-193)||(19600-19652)
scaffold0025 (86-198)||(19038-19150)
[»] scaffold0725 (1 HSPs)
scaffold0725 (149-199)||(6698-6748)
[»] scaffold0092 (1 HSPs)
scaffold0092 (143-197)||(37783-37837)
[»] scaffold0001 (2 HSPs)
scaffold0001 (138-198)||(405450-405509)
scaffold0001 (146-197)||(405067-405118)
[»] scaffold0951 (1 HSPs)
scaffold0951 (30-129)||(3773-3873)
[»] scaffold0286 (1 HSPs)
scaffold0286 (139-195)||(17639-17695)
[»] scaffold0014 (1 HSPs)
scaffold0014 (30-97)||(79090-79158)


Alignment Details
Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 51315625 - 51315801
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| ||||||||||||| ||||||||| |||| |||||||||||||| ||| |||||||||||||| |||| |||||||||||||| ||  |    
T  51315625 aacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaggtgcaaaacttagggggcggt 51315724  T
Q  124 tttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||        ||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  51315725 tttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctaa 51315801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 44585933 - 44586097
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtc-ttggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    ||||| ||||||||||||| ||||||||| |||| |||||||||||||| | | |||||||||||||| ||||| ||||||||||||| ||  |||||||    
T  44585933 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcggttttgta 44586032  T
Q  130 g-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |        ||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||    
T  44586033 gttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 44436537 - 44436645
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||     
T  44436537 ataacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcg 44436636  T
Q  122 attttgtag 130  Q
     ||||||||    
T  44436637 gttttgtag 44436645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 28712628 - 28712490
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    ||||| |||||| ||||||||||||| ||||||||  |||| ||||||||| |||| |||||| || |||||||||||||||||||||||||||| || |    
T  28712628 taacacgtggcacctcacttagggtgccacgtcagtgtagaccgagtcaaagttggccttgggtgctaaaactgctacagatgcaaaacttagggggcga 28712529  T
Q  123 ttttgtagnnnnnnncttagggggtcaaaatcgcaactt 161  Q
    ||||||||       ||||||||| ||||||| ||||||    
T  28712528 ttttgtagtttttttcttagggggccaaaatcacaactt 28712490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 86748 - 86644
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||  || |||||| ||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||    
T  86748 ataacacgtggcacctcacttagggtcccatgtcagcgtagatcgagtcaaaattggtcttgggggccaaaactgctacaagtgcaaaacttagggcgca 86649  T
Q  122 atttt 126  Q
     ||||    
T  86648 gtttt 86644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 33329756 - 33329851
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| |||||||||||||||||| |||||||||||||| ||| |||||| ||||||||    
T  33329756 ataacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaatacttaggg 33329851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 7218290 - 7218384
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagg 116  Q
    |||||| |||||| |||||||| ||||||||||||||||||||| |||||||||||  ||| |||||||||||||| ||||||| ||||||||||    
T  7218290 ataacacgtggcacctcacttaaggtgtcacgtcagcatagatcaagtcaaaattgaccttgggggccaaaactgccacagatgtaaaacttagg 7218384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 28712662 - 28712776
Alignment:
Q  83 tggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||| |||||||||||||| |||||||||||||| || |||||||||       ||||||||| ||||||| ||||||| | ||||||||||| | |||    
T  28712662 tggggtcaaaactgctacagttgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaa 28712761  T
Q  183 actgctattaagcct 197  Q
    |||||||||||||||    
T  28712762 actgctattaagcct 28712776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 48348400 - 48348505
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaatt 124  Q
    |||| |||||| ||||||||| ||| ||||||||| |||| |||||||||||||| ||||||| ||||||||| ||| |||||||||||| || || |||    
T  48348400 aacacgtggcacctcacttagcgtgccacgtcagcgtagaccgagtcaaaattgggcttggggtcaaaactgccacatatgcaaaacttaaggggcgatt 48348499  T
Q  125 ttgtag 130  Q
    ||||||    
T  48348500 ttgtag 48348505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 28204604 - 28204478
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    |||||||| |||||||  ||||||||||||||| || |||| |||||| || |||||||||        |||||||||||||||||||||||||||||||    
T  28204604 aaaattggccttgggggaccaaaactgctacagttgtaaaatttagggggcgattttgtagtttttt--ttagggggtcaaaatcgcaacttcgtgaaag 28204507  T
Q  170 ttaggggactaaaactgctattaagccta 198  Q
    ||| ||| | |||||||||||||||||||    
T  28204506 ttaaggggcgaaaactgctattaagccta 28204478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 44624784 - 44624704
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||||| ||||||||| |||| |||||||||||||| |||||| |||||||||| ||||||||||||| |||||    
T  44624784 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggaccaaaactgccacagatgcaaaacataggg 44624704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 46226944 - 46227004
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  46226944 ttagggggtcaaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaatcctaa 46227004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 38958045 - 38958160
Alignment:
Q  83 tggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||| |||||||||||||| |||||||||||||| ||  ||||||||       |||||||| ||||||||| || ||||||||||||||||| | |||    
T  38958045 tggggtcaaaactgctacagttgcaaaacttagggggcggttttgtagtttttt-cttaggggctcaaaatcgtaatttcgtgaaagttagggggcgaaa 38958143  T
Q  183 actgctattaagcctaa 199  Q
    |||||||||||||||||    
T  38958144 actgctattaagcctaa 38958160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 1814696 - 1814866
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt--ggggccaaaactgctacagatgcaaaacttagggagc 120  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| ||||||||||||| ||||  ||||||||||||||     |||||||||||||||  |    
T  1814696 ataacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgatcttagggggccaaaactgc----catgcaaaacttaggggac 1814791  T
Q  121 aattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
      ||||||||       ||||||||  |||||||| ||||| |  ||||||||| | ||||||||||||||||||    
T  1814792 ggttttgtagtttttttcttaggggtccaaaatcgaaactttggaaaagttaggaggctaaaactgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 3192983 - 3193097
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||| ||||| ||||||||||||||  |  ||||| ||       ||||||||||||||||||||||||| |||||||||||||   ||||    
T  3192983 ggggccaaaactgttacagttgcaaaacttaggggtcggttttgaagtttttttcttagggggtcaaaatcgcaacttcttgaaagttagggggtgaaaa 3193082  T
Q  184 ctgctattaagccta 198  Q
    |||||||||||||||    
T  3193083 ctgctattaagccta 3193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 3916604 - 3916496
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| ||||| ||  |||| |||||||||||||   |||||| |||||||||| ||||||||||||||||| ||||     
T  3916604 ataacacgtggcacctcacttagggtgccacgttagtgtagaccgagtcaaaattgactttgggggccaaaactgccacagatgcaaaacttagtgagcg 3916505  T
Q  122 attttgtag 130  Q
    |||||||||    
T  3916504 attttgtag 3916496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 54719144 - 54719309
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    ||||| ||||||||||||| ||||||||| |||| ||||||||||||||  || ||||||||| ||| |||| ||||||||||||||| ||  |||||||    
T  54719144 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggccaaacctggtacatatgcaaaacttagggggcggttttgta 54719243  T
Q  130 gnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |       |||||| || |||||||||||||| |   ||||||||||  ||||||||| ||||||||    
T  54719244 g-ttttttcttaggaggccaaaatcgcaactttgaataagttagggggttaaaactgccattaagcc 54719309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 578552 - 578647
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||| | |||| || |||||||||||    
T  578552 ataacacgtggcacctcgcttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggccaaaactaccacaggtgaaaaacttaggg 578647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 8024921 - 8025016
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||| | |||| ||||| |||||||||||| |||| ||||| |||||||||||||| |||||||||| | ||| |||||||||||||||    
T  8024921 ataacatgtggtacctcatttaggatgtcacgtcagcgtagaccgagttaaaattggtcttggaggccaaaactaccacatatgcaaaacttaggg 8025016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 12759647 - 12759702
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattg 78  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  12759647 ataacatgtggcacctcacttagggtgtcacgtcagcctagatcgagtcaaaattg 12759702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 25843540 - 25843445
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| ||| ||||||||| ||||||||| ||||  | ||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  25843540 ataacacgtggcacctcgcttagggtgccacgtcagcgtagactgggtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaggg 25843445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 43747405 - 43747282
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    ||||||||||||||||  ||||||||||||||  |||||||||||  | || |||||||||       ||||||||| ||||||||||||||||| ||||    
T  43747405 aaaattggtcttggggggccaaaactgctacaattgcaaaacttattgggcgattttgtagtttttttcttagggggccaaaatcgcaacttcgtaaaag 43747306  T
Q  170 ttaggggactaaaactgctattaa 193  Q
    |||  |||| ||||||||||||||    
T  43747305 ttataggacgaaaactgctattaa 43747282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 54719051 - 54718993
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  54719051 ttaggggttcaaaatcgcaacttcgtgaaagttagtggacgaaaactgctattaagcct 54718993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 14349313 - 14349424
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||| ||||| ||||||||||| |  ||| ||||||||        ||||||||| |||||||||||||||| ||||||||||| | ||||    
T  14349313 ggggccaaaactgttacagttgcaaaacttaagaggcagttttgtagttttt---ttagggggttaaaatcgcaacttcgtaaaagttagggggcgaaaa 14349409  T
Q  184 ctgctattaagccta 198  Q
    |||||||||||||||    
T  14349410 ctgctattaagccta 14349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 195
Target Start/End: Complemental strand, 19404517 - 19404399
Alignment:
Q  76 ttggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggg 175  Q
    |||| |||||||| |||||||||| || ||||||| |||||| ||| ||||||||       ||||| |||  |||||||||||||||||||||||||||    
T  19404517 ttggccttggggctaaaactgctatagttgcaaaatttagggggcagttttgtagtttttt-cttagagggctaaaatcgcaacttcgtgaaagttaggg 19404419  T
Q  176 gactaaaactgctattaagc 195  Q
    ||| ||||||| ||||||||    
T  19404418 gacgaaaactgttattaagc 19404399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 86820 - 86880
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  86820 cttagggggccaaaatcgcaacttcatgaaagttaggggacgaaaactcctattaagccta 86880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 14856659 - 14856546
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    |||||||||||| ||| || ||||||||||| || || |||||||||        ||||||| ||||||||||||||||||||||||||||||  | |||    
T  14856659 ggggccaaaactactatagttgcaaaacttatggggcgattttgtagttttttttcttagggagtcaaaatcgcaacttcgtgaaagttagggtgcgaaa 14856560  T
Q  183 actgctattaagcc 196  Q
    ||||||||||||||    
T  14856559 actgctattaagcc 14856546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 43747419 - 43747527
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtc-ttggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||||||||| || ||||||||| |||| ||||||||||||| || | |||||||||||||| | | ||||||||||||||| ||     
T  43747419 ataacacgtggcacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgatcgtgggggccaaaactgccataaatgcaaaacttagggggcg 43747518  T
Q  122 attttgtag 130  Q
     ||||||||    
T  43747519 gttttgtag 43747527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 27178264 - 27178141
Alignment:
Q  72 aaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||||||||||| ||||| |  |||||||||||||| ||  ||||||||        ||||||||| |||| |||||||||||| |||||    
T  27178264 aaaattggccttggggccaaaattgctatatttgcaaaacttagggtgcggttttgtagttatttttcttagggggccaaa-tcgcaacttcgtaaaagt 27178166  T
Q  171 taggggactaaaactgctattaagc 195  Q
    |||||||| ||||||||||||||||    
T  27178165 taggggacgaaaactgctattaagc 27178141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 195
Target Start/End: Complemental strand, 54464323 - 54464163
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggc-caaaactgctacagatgcaaaacttagggagcaattttgtag-nnnn 134  Q
    |||||||| |||| ||||| ||| |||| |||||||||||||  |||||||  ||||||||| ||| |||||||||||||||  || ||||||||         
T  54464323 ctcacttaaggtgccacgtgagcgtagaccgagtcaaaattgaccttgggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttctt 54464224  T
Q  135 nnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
       |||| ||| ||||||||| |||||    ||||||||||||||||||||||||||||||    
T  54464223 tttcttaagggatcaaaatcgtaactttagaaaagttaggggactaaaactgctattaagc 54464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 33329669 - 33329611
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||||||||||||||||||||| |||||||| || | |||||||||||||||||    
T  33329669 cttagggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc 33329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 17773282 - 17773169
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnnc-ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    |||||||||||||| |||| |||||||||||||| ||  ||||||||       | |||||| | |||||||||||||| |||||||||||||| | |||    
T  17773282 ggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 17773184  T
Q  183 actgctattaagcct 197  Q
    |||||||||||||||    
T  17773183 actgctattaagcct 17773169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 19074583 - 19074470
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnnc-ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    |||||||||||||| |||| |||||||||||||| ||  ||||||||       | |||||| | |||||||||||||| |||||||||||||| | |||    
T  19074583 ggggccaaaactgccacagttgcaaaacttaggg-gcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaa 19074485  T
Q  183 actgctattaagcct 197  Q
    |||||||||||||||    
T  19074484 actgctattaagcct 19074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 53184668 - 53184587
Alignment:
Q  38 tcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggag 119  Q
    ||||||||||||||| |||||| |||| ||||||||||||||| |||| | ||||||||| ||| |||||||| || |||||    
T  53184668 tcacttagggtgtcaagtcagcgtagaccgagtcaaaattggttttggaggcaaaactgccacaaatgcaaaaatttgggag 53184587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 36677650 - 36677758
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||||||| |||| ||||||||| || | |||||||||||||  ||||| |||||||| ||| ||| ||||||| ||||||| | |    
T  36677650 ataacacgtggcacctcacttaaggtgccacgtcagcgtaaaccgagtcaaaattgaccttggaggccaaaattgccacaaatgcaaatcttagggtgaa 36677749  T
Q  122 attttgtag 130  Q
    |||||||||    
T  36677750 attttgtag 36677758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 36687730 - 36687838
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| ||||||||| || | |||||||||||||   |||| |||||||| ||| ||| ||||||| ||||||| | |    
T  36687730 ataacacgtggcacctcacttagggtgccacgtcagcgtaaaccgagtcaaaattgacattggaggccaaaattgccacaaatgcaaatcttagggtgaa 36687829  T
Q  122 attttgtag 130  Q
    |||||||||    
T  36687830 attttgtag 36687838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 578533 - 578438
Alignment:
Q  76 ttggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagtta 172  Q
    |||| ||||||||||||||  |||||| ||||||||||||||| | |||||||||       |||| |||||||||||| |||||||||||||||||    
T  578533 ttggccttggggccaaaaccactacagttgcaaaacttagggaacgattttgtagtttttttctta-ggggtcaaaatctcaacttcgtgaaagtta 578438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 3192948 - 3192774
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt--ggggccaaaactgctacagatgcaaaacttagggagc 120  Q
    ||||||||||||| ||||||||||||| || || ||  |||| |||||||||||||  |||  |||||| ||||| |||||| || |||||||||||  |    
T  3192948 ataacatgtggcacctcacttagggtgccatgttagtgtagaccgagtcaaaattgaccttgaggggcctaaactactacagttgaaaaacttaggggtc 3192849  T
Q  121 aattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
      ||||||||       |||||||| | |||| |||||||| |  ||||||||||| |||||||| ||||||||||    
T  3192848 ggttttgtagttttttccttaggggatgaaaagcgcaactttgaaaaagttagggg-ctaaaacttctattaagcc 3192774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 28944231 - 28944282
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  28944231 caaaatcgcaacttagtaaaagttaggggacaaaaactgctattaagcctaa 28944282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 25154382 - 25154497
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||||||||||||||||| ||||||||||| || ||  ||||||||        |||||| |||||||||| |||||| |  |||||||||||  ||||    
T  25154382 ggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttcttaggaggtcaaaatcacaactttggtaaagttagggggttaaa 25154481  T
Q  183 actgctattaagccta 198  Q
    ||||||||||||||||    
T  25154482 actgctattaagccta 25154497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 38177349 - 38177259
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    ||||||||||| ||||||||||||| |||||||||  | | |||||||||||||| ||| |||||||||| ||  ||| ||||||||||||    
T  38177349 aacatgtggcacctcacttagggtgccacgtcagcgcaaaccgagtcaaaattggccttgggggccaaaaatgtcacatatgcaaaactta 38177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 48348303 - 48348249
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaatta 202  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||| |||||||    
T  48348303 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagtctaatta 48348249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 199
Target Start/End: Original strand, 4474257 - 4474384
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||| | ||  |||||||         |||||||| ||||||||||||||||| ||||    
T  4474257 aaaattggtcttggggggccaaaactgctacagttgcaaaacttagagggcggttttgtaatttttt--ttagggggccaaaatcgcaacttcgtaaaag 4474354  T
Q  170 ttaggggactaaaactgctattaagcctaa 199  Q
    ||||| |   |||||||||||||| |||||    
T  4474355 ttaggaggagaaaactgctattaaacctaa 4474384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 207
Target Start/End: Original strand, 44433226 - 44433391
Alignment:
Q  46 ggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtag--nnnnnnncttag 142  Q
    |||| ||| ||||| |||| || ||||||||||| ||||||| |||||||||| ||| ||||||||||||||| ||  ||||||||         |||||    
T  44433226 ggtgccacatcagcgtagaccgggtcaaaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttttttcttag 44433325  T
Q  143 gg-ggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaat 207  Q
    || || | |||||||||||  |  ||||||||||| ||||||||||||||||||||| || |||||    
T  44433326 ggaggccgaaatcgcaactgtggaaaagttagggggctaaaactgctattaagcctatttcttaat 44433391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 19404533 - 19404625
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    |||||| |||||| ||||||||||||||||||| ||| ||||   |||||||||||| ||| |||||||||||||  |||  |||||||||||    
T  19404533 ataacacgtggcacctcacttagggtgtcacgttagcgtagactaagtcaaaattggccttgggggccaaaactgtcacatgtgcaaaactta 19404625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 36567020 - 36567108
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| ||||||||||||| ||||||||| | || ||||||||||| || ||| ||||||||||||  ||||| |||||||| |||||    
T  36567020 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaatcggccttgggggccaaaactagtacagttgcaaaacataggg 36567108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 36677581 - 36677521
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||| | |||||||||||||||||||||||||| || | ||||||| ||||||||||||    
T  36677581 ttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcctaa 36677521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 36687663 - 36687603
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||| | |||||||||||||||||||||||||| || | ||||||| ||||||||||||    
T  36687663 ttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcctaa 36687603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 47189733 - 47189841
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||| || |||||||| |||||||||||||  ||||   ||||||||||| ||||| ||| ||||||||| ||| |||||||||||| |||||     
T  47189733 ataacacgtgacacctcacttaaggtgtcacgtcagtgtagacgaagtcaaaattgatcttgagggtcaaaactgccacaaatgcaaaacttatggagcg 47189832  T
Q  122 attttgtag 130  Q
     ||||||||    
T  47189833 gttttgtag 47189841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 4474228 - 4474150
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttag 115  Q
    |||||||||| ||||| |||||| |||| ||| |||||||||||||| |||| ||||||||| ||| |||||||||||||    
T  4474228 ctcacttagg-tgtcatgtcagcgtagaccgaatcaaaattggtcttaggggtcaaaactgccacaaatgcaaaacttag 4474150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 20432248 - 20432189
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||  |||| |||||||||||| ||||||||||| | ||||||||||||||||||    
T  20432248 cttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcct 20432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 25154348 - 25154263
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg--tcttgggg-ccaaaactgctacagatgcaaaactta 114  Q
    ||||| |||||||| |||| ||||||||| |||||||||||||||||||   || |||| |||||||||| ||||||||||||||||    
T  25154348 tggcacctcacttaaggtgccacgtcagcgtagatcgagtcaaaattggcccctcggggcccaaaactgc-acagatgcaaaactta 25154263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 25902609 - 25902668
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||| | |||||||||||||| | |||||||||||| ||||||||| ||||||||||    
T  25902609 cttagggagccaaaatcgcaactttgagaaagttagggggctaaaactgatattaagcct 25902668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 52008419 - 52008313
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggcc--aaaactgctacagatgcaaaacttagggag 119  Q
    |||||| ||| || ||||||||||||||||||||||| |||| ||||||||||||  | || ||||||  |||||||| ||| |||||||| |||| | |    
T  52008419 ataacacgtgacacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattaattttaggggccaaaaaactgccacatatgcaaaaattagaggg 52008320  T
Q  120 caatttt 126  Q
    |||||||    
T  52008319 caatttt 52008313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 196
Target Start/End: Original strand, 53184719 - 53184831
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||| ||| ||||||  |||  | ||||||||||||       |||||| ||  |||||||||||||||| ||||||||||  | ||||    
T  53184719 ggggccaaaactgcttcagttgcaaattttaatgggcaattttgtagtttttttcttaggtggcaaaaatcgcaacttcgtaaaagttagggagcgaaaa 53184818  T
Q  184 ctgctattaagcc 196  Q
    |||||||||||||    
T  53184819 ctgctattaagcc 53184831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 46226871 - 46226777
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtct-tggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||| |||||| ||||||||||||| ||||||||| || | ||||| ||||||||  |  |||||||||||||| |||| |||||||| |||||    
T  46226871 taacacgtggcacctcacttagggtgccacgtcagcgtataccgagttaaaattggcatcgggggccaaaactgccacaggtgcaaaacataggg 46226777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 49002609 - 49002655
Alignment:
Q  51 cacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgc 97  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||||    
T  49002609 cacgtcagcattgaccgagtcaaaattggtctaggggccaaaactgc 49002655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 14340781 - 14340732
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||| |||||||||||||||||||| | |||||| |||||||||||    
T  14340781 caaaatcgtaacttcgtgaaagttagggggcgaaaactcctattaagcct 14340732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 20432323 - 20432432
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatg-caaaacttagggagc 120  Q
    |||||| |||||| |||||||||||||  |||||||| |||| | |||||||||||  ||| |||| ||||||||| |||||||  ||||||||||| |     
T  20432323 ataacacgtggcacctcacttagggtgctacgtcagcgtagaccaagtcaaaattgtccttgggggtcaaaactgccacagatgtaaaaacttagggggt 20432422  T
Q  121 aattttgtag 130  Q
     |||||||||    
T  20432423 gattttgtag 20432432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 27178288 - 27178381
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||||| || ||||| ||||||| ||| ||||| |||| | ||||||||||||  || |||| ||||||| | |||||||||||||||||||    
T  27178288 aacatgtgacacctcacgtagggtgacacatcagcgtagaccaagtcaaaattggcattgggggtcaaaactaccacagatgcaaaacttaggg 27178381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 38957978 - 38957913
Alignment:
Q  66 cgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||||||||||||| ||||||| |||||||||| ||| ||||||||||||||| ||  ||||||||    
T  38957978 cgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtag 38957913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 42686540 - 42686479
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||||||||||||||||||  ||||| ||||| |  ||||||||||||||| |||||    
T  42686540 cttagggggtcaaaatcgcaactttttgaaacttaggaggttaaaactgctattaaacctaa 42686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 28204625 - 28204733
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||| || |||| ||||| || ||||||||  |||| ||||||||||||||  |||| |||||||||| | ||| || ||||||||| || |||    
T  28204625 ataacacgtgacacctcaattaggatgccacgtcagtgtagaccgagtcaaaattggcattggaggccaaaactaccacaaatacaaaacttaaggggca 28204724  T
Q  122 attttgtag 130  Q
    |||||||||    
T  28204725 attttgtag 28204733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 1938490 - 1938399
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaactta 114  Q
    ||||| ||| || ||||||||||||| || |||||| |||| |||||||||||||   ||| ||||||||||| | |||| |||||||||||    
T  1938490 taacacgtgacacctcacttagggtgccatgtcagcgtagaccgagtcaaaattgactttgtgggccaaaactaccacaggtgcaaaactta 1938399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 2205670 - 2205741
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgc 97  Q
    |||||||||| ||||||||| ||||||||||||| | || |||||||| | ||| || ||| ||||||||||    
T  2205670 acatgtggcacctcacttagagtgtcacgtcagcgttgaccgagtcaacaatggactggggtccaaaactgc 2205741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 12759561 - 12759502
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||| |||| ||||||||||| ||| ||||||||||||| | ||||||| ||||||||||    
T  12759561 cttaaggggccaaaatcgcaatttcttgaaagttagggggcaaaaactgttattaagcct 12759502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 15978888 - 15978939
Alignment:
Q  79 gtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||||||||||||||||||| || |||||||||||||| ||  ||||||||    
T  15978888 gtcttggggccaaaactgctatagttgcaaaacttagggggcggttttgtag 15978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 28944154 - 28944095
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||||||| ||||||| ||||||||||||||  |||||||||||||| |||||| |||||    
T  28944154 aaaattggccttgggggccaaaactgctacatgtgcaaaacttagggggcaattatgtag 28944095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 49787397 - 49787334
Alignment:
Q  51 cacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaactt 113  Q
    ||||||||| |||| |||||||||||||   |||| |||||||||||| |||||||||||||||    
T  49787397 cacgtcagcgtagaccgagtcaaaattgactttggaggccaaaactgccacagatgcaaaactt 49787334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 25782794 - 25782888
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggag 119  Q
    |||||||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||  |||||||||||| |||  |||||| |||||||    
T  25782794 acatgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactggggatccaaaactgctaaagaatcaaaacatagggag 25782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 38177236 - 38177178
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||| |||||||||||||| | |||||||| ||| |||||| ||| ||||||||    
T  38177236 cttagggggccaaaatcgcaactttgggaaagttaaggggctaaaattgccattaagcc 38177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 44436501 - 44436455
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||||    
T  44436501 ggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 44436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 22494674 - 22494544
Alignment:
Q  75 attggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttagg 174  Q
    |||| ||| |||||||||| ||| ||| |||||||| |||| | ||  ||||||||       |||||||||||||||||| ||||| |  ||| |||||    
T  22494674 attgatctgggggccaaaattgccacaaatgcaaaatttagagggcggttttgtagtttttttcttagggggtcaaaatcgtaactttggaaaatttagg 22494575  T
Q  175 ggactaaaactgctattaagcctaattatta 205  Q
    ||  ||||| |||||||||| |||| |||||    
T  22494574 gggttaaaattgctattaagtctaaatatta 22494544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 35359156 - 35359067
Alignment:
Q  38 tcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaatttt 126  Q
    ||||||| |||| ||||||||| |||| |||||||||||||   || |||||||||||||| |||  ||||||| |||||| || |||||    
T  35359156 tcacttaaggtgccacgtcagcgtagaccgagtcaaaattgacattaggggccaaaactgccacatgtgcaaaaattagggggcgatttt 35359067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 47189708 - 47189599
Alignment:
Q  85 gggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaac 184  Q
    |||||||||||||||||| ||||||||||| || ||  |||| |||        |||||||| ||||||||||||||| | ||||||||||  | |||||    
T  47189708 gggccaaaactgctacagttgcaaaacttaaggggcggttttatagttttttt-ttagggggccaaaatcgcaacttcataaaagttagggagcgaaaac 47189610  T
Q  185 tgctattaagc 195  Q
    || ||||||||    
T  47189609 tgttattaagc 47189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 51315607 - 51315574
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||||||||||| ||||||||||||||    
T  51315607 ggggccaaaactgctacagttgcaaaacttaggg 51315574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 3354942 - 3355002
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||  ||||||||||||||| ||| | ||||||| | ||| ||||||||||||||||    
T  3354942 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 3355002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 10864287 - 10864215
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  10864287 acatgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 10864215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 28097569 - 28097657
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| |||||||||||| |||  |||||| |||||    
T  28097569 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgctaaagaatcaaaacataggg 28097657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 45744067 - 45743999
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| |||||||||||||||||||||||   ||||||||||| | ||| || |||| ||||||||||    
T  45744067 gtggcacctcacttagggtgtcacgtcagcgctgatcgagtcaacaatggactgggggtccaaaactgc 45743999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 49002758 - 49002826
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaat 207  Q
    |||||||  ||||||||||||||| ||||| |||| || | |||| ||| |||||||||||| ||||||    
T  49002758 ttaggggtccaaaatcgcaacttcttgaaaattagagggccaaaagtgcaattaagcctaataattaat 49002826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 54476100 - 54476040
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||||||||||||| | |||  |||||| | |||| ||| |||||||||||    
T  54476100 ttagggggtcaaaatcgcaacttcttaaaatatagggggccaaaagtgcaattaagcctaa 54476040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 10727335 - 10727511
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    ||||||||||||||||||||||||  ||||||||| |||||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||  |    
T  10727335 aacatgtggcatctcacttagggtcccacgtcagcgtagatcaagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggt 10727434  T
Q  124 tttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||        ||||||||| ||||||| |||||| |  ||||||||||| ||||||||||||||| ||||||    
T  10727435 tttgtagttttttttcttagggggccaaaatcacaactttggaaaagttagggggctaaaactgctattatgcctaa 10727511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 30349523 - 30349348
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggc-caaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||||||||| ||||||| | |||| ||||||| |||||| |||||||  ||||||| | |||||||||||||||| || ||     
T  30349523 ataacatgtggcacctcacttagggtgccacgtcaacgtagaccgagtcataattggccttgggggtcaaaactaccacagatgcaaaacttaaggggcg 30349424  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     ||||||||       |||||||| ||||||||||||||| | ||||||||| || ||||||||||||||||||||    
T  30349423 gttttgtagtttttttcttaggggctcaaaatcgcaactttgggaaagttagagggctaaaactgctattaagcct 30349348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 6036798 - 6036971
Alignment:
Q  22 tataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg-tcttggggccaaaactgctacagatgcaaaacttagggagc 120  Q
    |||||||||||||| |||||||||||||||||||||||||| | | |||||||||||| | | |||| ||||||||| ||| |||||||||||||||  |    
T  6036798 tataacatgtggcacctcacttagggtgtcacgtcagcataaaccaagtcaaaattggctttgggggtcaaaactgccacatatgcaaaacttaggggac 6036897  T
Q  121 aattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    | ||||||||       |||||| || ||||||||||||||    ||||||||||| ||||||||||||||||||    
T  6036898 agttttgtagttttcttcttaggaggccaaaatcgcaactttagaaaagttagggg-ctaaaactgctattaagc 6036971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 3812900 - 3812819
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttaggga 118  Q
    ||||||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  3812900 ctcacttagggtgccacgtcagcgtagaccgggtcaaaattggtcttggggccaaaactgccacatatgcaaaacttaggga 3812819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 33399944 - 33399784
Alignment:
Q  38 tcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnn 136  Q
    |||||||||||| ||||||||| |||| |||||||||||||  ||| |||||||||||||| ||| ||| |||||||||||  |  ||||||||          
T  33399944 tcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttaggggccaaaactgccacaaatgtaaaacttagggtccggttttgtagtttttt 33399845  T
Q  137 ncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
     ||||| ||| |||||||||||||| |  ||||||||||| |||||||||||||||||||||    
T  33399844 tcttagagggccaaaatcgcaactttggaaaagttagggg-ctaaaactgctattaagccta 33399784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 203
Target Start/End: Complemental strand, 3579707 - 3579588
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    |||||||||| |||||||| |||||||||||||| ||  ||||||||        ||| |||| ||||||||||||||||||||||||| ||||| ||||    
T  3579707 ggggccaaaagtgctacagttgcaaaacttagggggcggttttgtagttttttttttacggggccaaaatcgcaacttcgtgaaagttaagggacgaaaa 3579608  T
Q  184 ctgctattaagcctaattat 203  Q
    ||||||||||||||| ||||    
T  3579607 ctgctattaagcctagttat 3579588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 12766403 - 12766529
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||| || ||  ||||||||        |||||||| |||||||||||||||||||||||    
T  12766403 aaaattggccttgggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttttagggggccaaaatcgcaacttcgtgaaagt 12766502  T
Q  171 taggggactaaaactgctattaagcct 197  Q
    ||||||   ||||||||||||||||||    
T  12766503 tagggggtgaaaactgctattaagcct 12766529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 1377409 - 1377517
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||| ||||| ||||||||||||||| || ||||||||       ||||||||  ||||||||||||||||||||||||||||||| ||||    
T  1377409 ggggccaaaactgttacagttgcaaaacttagggaacagttttgtagtttttttcttaggggc-caaaatcgcaacttcgtgaaagttaggggacgaaaa 1377507  T
Q  184 ctgctattaa 193  Q
    ||| ||||||    
T  1377508 ctgatattaa 1377517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 1385157 - 1385265
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||| ||||| ||||||||||||||| || ||||||||       ||||||||  ||||||||||||||||||||||||||||||| ||||    
T  1385157 ggggccaaaactgttacagttgcaaaacttagggaacagttttgtagtttttttcttaggggc-caaaatcgcaacttcgtgaaagttaggggacgaaaa 1385255  T
Q  184 ctgctattaa 193  Q
    ||| ||||||    
T  1385256 ctgatattaa 1385265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 266251 - 266342
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaactta 114  Q
    |||||| ||| || |||||||||| |||||||||||| |||| ||| ||||||||||| |||||||||||||||| |||| |||||||||||    
T  266251 ataacacgtgacacctcacttaggatgtcacgtcagcgtagaccgaatcaaaattggttttggggccaaaactgccacaggtgcaaaactta 266342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 239040 - 238927
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||| | ||||||||||||||  | |||||||||        ||||| |||||||||||||||||||||||| ||||||| | ||||    
T  239040 ggggccaaaactgctacggttgcaaaacttaggggacgattttgtagtttttt--ttaggaggtcaaaatcgcaacttcgtgaaaattagggggcgaaaa 238943  T
Q  184 ctgctattaagcctaa 199  Q
    ||||||||||||||||    
T  238942 ctgctattaagcctaa 238927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 5003218 - 5003324
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||||||| || ||||||||||||||||||||||| |||| | ||| |||||||   ||||| ||||||||||| |||  |||||||||||||| |||    
T  5003218 ataacatgtgacacctcacttagggtgtcacgtcagcgtagaccaagttaaaattgacattgggagccaaaactgccacaattgcaaaacttagggggca 5003317  T
Q  122 attttgt 128  Q
    |||||||    
T  5003318 attttgt 5003324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 239093 - 239256
Alignment:
Q  32 ggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaactta--gggagcaattttgt 128  Q
    |||| ||||||||||||| ||||||||| |||| ||| |||||||||| |||||| ||||||||||| |||| ||| |||||||  |||  | |||||||    
T  239093 ggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggccttgggtgccaaaactgcaacaggtgctaaacttatgggggacgattttgt 239192  T
Q  129 agnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    ||       |||| |||| | |||||||||||| | ||||||||||||  |||||||||||||||    
T  239193 agtttttttctta-ggggaccaaatcgcaactttgagaaagttagggggttaaaactgctattaa 239256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 32143433 - 32143341
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    |||||||||| || ||||||||| ||| ||| ||| | |||| |||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  32143433 ataacatgtgccacctcacttagagtgccacatcaacgtagaccgagtcaaaattggtcttgggggccaaaactgccacaggtgcaaaactta 32143341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 2853582 - 2853741
Alignment:
Q  51 cacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtc 148  Q
    ||||||||| ||||  ||||||||||||| ||||||| |||||||||| ||| ||| ||||||||||| ||  ||||||||        ||||||||| |    
T  2853582 cacgtcagcgtagaatgagtcaaaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggttttgtagttttttttcttaggggggc 2853681  T
Q  149 -aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaat 207  Q
     ||||| ||||||| | |||||||||| |  ||||||||||||||||||||||| |||||    
T  2853682 caaaattgcaactttgagaaagttaggaggttaaaactgctattaagcctaatttttaat 2853741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 33401242 - 33401367
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||  || ||||||||        |||||| | |||||||| |||||||| ||||    
T  33401242 aaaattggtcttggggggccaaaactgctacagttgcaaaacttaggggacagttttgtagttttttt-ttagggagccaaaatcgtaacttcgtaaaag 33401340  T
Q  170 ttaggggactaaaactgctattaagcc 196  Q
    |||||||   |||||||||||||||||    
T  33401341 ttagggggtgaaaactgctattaagcc 33401367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 26311550 - 26311635
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    |||||| |||||||||| || ||||||||| |||| |||||||||||||  ||| |||||||||||||| ||| ||||||||||||    
T  26311550 gtggcacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaactta 26311635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 30349612 - 30349677
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattat 203  Q
    ||||||||| |||||||||||||| |  ||||||||||||| ||||||||||||||||||| ||||    
T  30349612 cttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagcctatttat 30349677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 1377379 - 1377275
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagcaatt 124  Q
    |||||||||| |||||||||||||  || |||||||||| |||||||||||  | |||| |||||||||| || ||| |||||||| |||||| || |||    
T  1377379 acatgtggcacctcacttagggtgcgacatcagcatagaccgagtcaaaataagccttgagggccaaaacagccacaaatgcaaaatttagggggcgatt 1377280  T
Q  125 ttgta 129  Q
    |||||    
T  1377279 ttgta 1377275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 1385127 - 1385023
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagcaatt 124  Q
    |||||||||| |||||||||||||  || |||||||||| |||||||||||  | |||| |||||||||| || ||| |||||||| |||||| || |||    
T  1385127 acatgtggcacctcacttagggtgcgacatcagcatagaccgagtcaaaataagccttgagggccaaaacagccacaaatgcaaaatttagggggcgatt 1385028  T
Q  125 ttgta 129  Q
    |||||    
T  1385027 ttgta 1385023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 2840965 - 2841039
Alignment:
Q  41 cttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaactta 114  Q
    ||||||||| ||||||| | |||| ||||||||||||||| ||| ||||||||||||| ||| ||||||||||||    
T  2840965 cttagggtgccacgtcaacgtagagcgagtcaaaattggttttgcgggccaaaactgccacaaatgcaaaactta 2841039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 6036702 - 6036644
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||||||||||||||||||||| ||||| | || | |||||||||||||||||    
T  6036702 cttagggggtcaaaatcgcaacttcgtggaagtttgcgggcgaaaactgctattaagcc 6036644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 26601621 - 26601540
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| ||||||  || ||||| |||| |||||||||||||||||||||| ||||| |||  |||||||||||||||||||    
T  26601621 ctcactaagggtgctacatcagcgtagaccgagtcaaaattggtcttggggaccaaagctgtcacagatgcaaaacttaggg 26601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 28011326 - 28011441
Alignment:
Q  83 tggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaa 181  Q
    |||||||||||||||||||| ||||||||||| || ||  ||||||||        |||||||   |||||||||||||||||||||||||||||   ||    
T  28011326 tggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttctcttaggga--caaaatcgcaacttcgtgaaagttagggggtgaa 28011423  T
Q  182 aactgctattaagcctaa 199  Q
    ||||||||||||| ||||    
T  28011424 aactgctattaaggctaa 28011441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 30965859 - 30965774
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaactta 114  Q
    |||||| ||||||||||||| ||||||||||| || |||||||||| ||| || |||| |||||||||||| |||  |||||||||    
T  30965859 gtggcacctcacttagggtgccacgtcagcattgaccgagtcaaaaatggactgggggtccaaaactgctaaagaatcaaaactta 30965774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 32143452 - 32143545
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttagggg 176  Q
    ||||||| ||||||||||| |||||||||||| | ||||||||||||        ||||| ||||||||||||||||||| | |||||||||||    
T  32143452 ggggccagaactgctacagttgcaaaacttagagggcaattttgtagttatttttcttagagggtcaaaatcgcaacttcataaaagttagggg 32143545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 2853553 - 2853453
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||||  |  ||||||||       |||||||||  ||||||||||||||||||||||    
T  2853553 aaaattggccttggggaccaaaactgctacagttgcaaaacttaggggacggttttgtag-ttttttcttagggggcgaaaatcgcaacttcgtgaaagt 2853455  T
Q  171 ta 172  Q
    ||    
T  2853454 ta 2853453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 10727303 - 10727187
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||||||||||||||||| |||||||||||| | ||| ||||||||        |||||| |  ||||||| ||||||||  ||||||||| | | |||    
T  10727303 ggggccaaaactgctacagttgcaaaacttagagggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaaagttaggaggcgaaa 10727204  T
Q  183 actgctattaagcctaa 199  Q
    |||||||||||||||||    
T  10727203 actgctattaagcctaa 10727187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 17248797 - 17248718
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttag 115  Q
    ||||||||||||| ||||||| | |||| ||| ||||||||||||||  ||||||||||||   ||||||||||||||||    
T  17248797 ctcacttagggtgccacgtcaacgtagaccgaatcaaaattggtcttaagggccaaaactgtcgcagatgcaaaacttag 17248718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 11351803 - 11351754
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg 79  Q
    |||||| ||||||||||||| ||||||||| |||| ||||||||||||||    
T  11351803 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgg 11351754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 18031043 - 18030944
Alignment:
Q  87 gccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactg 186  Q
    ||||||| |||||||| |||||||||||||| || |||||||||        ||||| || |||||||||||||||||||||||||||||   |||||||    
T  18031043 gccaaaattgctacagttgcaaaacttaggg-gcgattttgtagtttttt--ttaggaggccaaaatcgcaacttcgtgaaagttagggggagaaaactg 18030947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 18031081 - 18031154
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaact 95  Q
    |||||| ||| || ||||||||||||| ||||||||| |||| | ||||||||||| ||||| |||||||||||    
T  18031081 ataacaagtgacacctcacttagggtgccacgtcagcgtagaccaagtcaaaattgatcttgagggccaaaact 18031154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 266234 - 266122
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    |||| |||||||||||||| ||||||||||| || ||||||||||||        |||| |||| |||||| ||| ||| | ||||||| |||| |||||    
T  266234 ggggtcaaaactgctacagttgcaaaacttaaggggcaattttgtagttatttttctta-ggggccaaaattgcagctttgggaaagtttgggggctaaa 266136  T
Q  183 actgctattaagcc 196  Q
    ||||||||||||||    
T  266135 actgctattaagcc 266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 2203244 - 2203184
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||| || |||||||||||||| | |||||||||||  |||||| |||||||||||||||    
T  2203244 ttaggaggccaaaatcgcaactttgggaaagttagggagctaaaattgctattaagcctaa 2203184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 11277794 - 11277694
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||||||| | ||||||||||| | ||| || |||| |||||||||| | |||  |||||| ||||| || |||||||    
T  11277794 gtggcacctcacttagggtgccacgtcagcgttgatcgagtcaacaatggactgggggtccaaaactgccaaagaatcaaaacatagggggctattttgt 11277695  T
Q  129 a 129  Q
    |    
T  11277694 a 11277694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 17532425 - 17532334
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    ||||||||||||| ||||||| ||||| || |||| | |||| |||||||||| |||  || |||||||||||||| |||| |||||||||||    
T  17532425 ataacatgtggcacctcactt-gggtgccatgtcatcgtagaccgagtcaaaactggctttaggggccaaaactgccacaggtgcaaaactta 17532334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 20474906 - 20475014
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    |||||||||||||| ||||||||||||||||||| ||  ||||||||        |||| ||| ||||||||||||||| |  ||||||||||| |||||    
T  20474906 ggggccaaaactgccacagatgcaaaacttagggggc-gttttgtagttttttttcttaagggatcaaaatcgcaactttgaaaaagttagggggctaaa 20475004  T
Q  183 actgctatta 192  Q
    | ||||||||    
T  20475005 attgctatta 20475014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 5003139 - 5003084
Alignment:
Q  146 gtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaatt 201  Q
    ||||||||||||||||| | ||||||||||| | ||||||| ||||||||| ||||    
T  5003139 gtcaaaatcgcaacttcttaaaagttagggggcgaaaactgttattaagccaaatt 5003084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 26601727 - 26601769
Alignment:
Q  150 aaatcgcaacttcgtgaaagttaggggactaaaactgctatta 192  Q
    ||||||||||||||||||||||||| | | |||||||||||||    
T  26601727 aaatcgcaacttcgtgaaagttaggaggcaaaaactgctatta 26601769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 8223807 - 8223762
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    |||||||||||||||||||||||||| ||| |||| || |||||||    
T  8223807 aaaatcgcaacttcgtgaaagttaggagacaaaaattgttattaag 8223762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 22517490 - 22517547
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||||||||||| |||||| |||||  |||||||| |||| ||| ||||||||    
T  22517490 ttagggggtcaaaatcgtaacttcttgaaacataggggaccaaaagtgcaattaagcc 22517547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 29874368 - 29874417
Alignment:
Q  49 gtcacgtcagcatagatcgagtcaaaattggtct-tggggccaaaactgc 97  Q
    ||||||||||||| || |||||||||||||||||  ||||||||||||||    
T  29874368 gtcacgtcagcattgaccgagtcaaaattggtctagggggccaaaactgc 29874417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 2164714 - 2164770
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||| ||||||||||||||||| ||| | | ||||| | ||||||||||||||||    
T  2164714 ttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagc 2164770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 2176347 - 2176403
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||| ||||||||||||||||| ||| | | ||||| | ||||||||||||||||    
T  2176347 ttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagc 2176403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 11623351 - 11623299
Alignment:
Q  66 cgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||||||||| |||| |||||||||||| |||| ||| ||||||||    
T  11623351 cgagtcaaaattggtctaggggaccaaaactgctaaagatccaatacttaggg 11623299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 12798774 - 12798726
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||||||||| |||||  |||||| | ||||||||||||||||||    
T  12798774 aaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcct 12798726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 28563472 - 28563508
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    ||||||||||||||||||||||| | |||||||||||    
T  28563472 ctcacttagggtgtcacgtcagcgttgatcgagtcaa 28563508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 3377676 - 3377500
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||| || || ||||||||||| ||||||||||| |||| |||||||||||||| ||| |||||||||||||| ||| ||||||||||||||| ||     
T  3377676 ataacatatgacacctcacttagggcgtcacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcg 3377577  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     ||||||||        ||||||||| |||||||||||||| |  ||||||||||| ||||||||||||||||||||    
T  3377576 gttttgtagttttttttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 3377500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 18632481 - 18632319
Alignment:
Q  32 ggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggt-cttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||| |||| ||||||||| |||||||| |||||||||||||||||| | || |||||||||||||  ||| ||||||||||||| | ||||||||||||    
T  18632481 ggcacctcatttagggtgttacgtcagcgtagatcgagtcaaaattgatcctgggggccaaaactgtcacaaatgcaaaacttagagggcaattttgtag 18632382  T
Q  131 nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
           ||||||| |||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  18632381 -ttttttcttagggagtcaaaatcgcaactttgtgaaagttaagggactaaaactgcaattaag 18632319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 195
Target Start/End: Original strand, 16874649 - 16874816
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||||||| |||| |||||||||||||| |||||| ||||||||||| |||||||||||||||| || ||  ||||||    
T  16874649 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttatggggcggttttgt 16874748  T
Q  129 agnnnnnnncttagggggt-caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    ||       ||||| |||| |||||| ||||||| | ||||||||||||  |||||||||||||||||    
T  16874749 agtttttttcttagagggtccaaaattgcaactttgagaaagttagggggttaaaactgctattaagc 16874816  T

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Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 12960986 - 12961155
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtc-ttggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||| ||||||||||| |||| ||||||| ||||||  ||||    
T  12960986 aacatgtggcatctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggcctttggagccaaaactgccacagttgcaaaatttaggggacaat 12961085  T
Q  124 tttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||||||       ||||||    |||||||||||||| |  ||| ||||| | ||||||||||||||||    
T  12961086 tttgtagtttttttcttaggaaaccaaaatcgcaactttgaaaaaattaggaggctaaaactgctattaa 12961155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 45739103 - 45738933
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||| |||||||| |||||||||||||   |||||| |||||||||| | |||||||||||||| || ||  ||||||    
T  45739103 gtggcacctcacttagggtgccacgttagcatagaccgagtcaaaattgactttgggggccaaaactgccatagatgcaaaacttaaggggcggttttgt 45739004  T
Q  129 agnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||       ||||||||||||||||| |||||| | |||||||||||   ||||| |||||||||||||||    
T  45739003 agttttttccttagggggtcaaaatcacaactttgagaaagttagggagttaaaattgctattaagcctaa 45738933  T

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Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 41997785 - 41997875
Alignment:
Q  28 atgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  41997785 atgtggcacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggccttggaggccaaaactgccacagatgcaaagcttaggg 41997875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 17760859 - 17760681
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||| |||||||| ||||||||  |||| ||||||||||||| |||||| |||||||||||| ||| ||||||||||||||| |      
T  17760859 ataacacgtggcacctcatttagggtgccacgtcagtgtagaccgagtcaaaattgatcttggtggccaaaactgccacatatgcaaaacttagggggtg 17760760  T
Q  122 attttgtag---nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     ||||||||          ||||||||| |||||||||||||| | | |||||||||| ||||| ||||||||||||||    
T  17760759 gttttgtagttttttttttcttagggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaagcct 17760681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 14978971 - 14978797
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||||||||| ||| ||||| |||| | | |||||||||| ||| |||||||||||| | |||| |||||||||||||| |||    
T  14978971 ataacatgtggcacctcacttagggtgccacatcagcgtagaccaattcaaaattggcctttggggccaaaactaccacaggtgcaaaacttagggggca 14978872  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
     ||||||||        | | ||   |||||||||||||| |  ||||||||||| |||||||||||||||||||    
T  14978871 gttttgtagtttttttttgaaggacccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 16298196 - 16298300
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||| ||||||||||||| |||| | ||||||||||| | ||||| ||||||||||| ||||||||||||| ||||| |||    
T  16298196 ataacacgtggcacctcacttagagtgtcacgtcagcgtagaccaagtcaaaattgatattgggagccaaaactgccacagatgcaaaacatagggggca 16298295  T
Q  122 atttt 126  Q
    |||||    
T  16298296 atttt 16298300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 49426132 - 49426239
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    |||||| ||| || || |||||||||||||||||||| |||| | ||||||||||||  |||||||||||||||| ||| |||||||||||| ||| ||     
T  49426132 ataacacgtgacaccttacttagggtgtcacgtcagcgtagaccaagtcaaaattggcattggggccaaaactgccacaaatgcaaaacttaaggaacag 49426231  T
Q  123 ttttgtag 130  Q
    ||||||||    
T  49426232 ttttgtag 49426239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 44672487 - 44672326
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||||||  |||||||||||| ||||||||| |||| ||| ||||||||| ||||||| ||||||||||| ||| ||||||||||||||| ||     
T  44672487 ataacacgtggcacttcacttagggtgccacgtcagcgtagaccgaatcaaaattgatcttgggcgccaaaactgccacatatgcaaaacttagggggcg 44672388  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaact 185  Q
     |||||||         |||||||||||||||| |||||| | |||||||||| | ||||||||    
T  44672387 gttttgta--atttttgttagggggtcaaaatcacaactttgagaaagttaggaggctaaaact 44672326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 8301498 - 8301579
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  8301498 ctcaattagggtgtcacgtcagcgtagattgagtcaaaattggtcttgggggtcaaaactgccacagatgcaaaatttaggg 8301579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 23891772 - 23891662
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| ||||||||||| || ||  ||||||||       ||||||||| ||||||| ||||||||||||||||||||  | ||||    
T  23891772 ggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaagttagggagcgaaaa 23891673  T
Q  184 ctgctattaag 194  Q
    |||||||||||    
T  23891672 ctgctattaag 23891662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 50226530 - 50226623
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttag 115  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| |||||||| ||| | ||| ||||||||||||||||||| ||||||||||||    
T  50226530 ataacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaatattagccttcggggccaaaactgctacaggtgcaaaacttag 50226623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 25486388 - 25486217
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||| |||||||| ||||||||| |||| |||||||||||||  ||| ||||||||||| || ||||||||||||||||| | ||     
T  25486388 ataacacgtggcacctcatttagggtgccacgtcagcgtagaccgagtcaaaattgaacttaggggccaaaac-gccacagatgcaaaacttagagggcg 25486290  T
Q  122 attttgtag--nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctatta 192  Q
    ||||| |||         ||| |||| |||||||| |||||| | |||||||| |||||||||||||||||||    
T  25486289 attttatagtttttttttcttgggggatcaaaatcacaactttgagaaagttaagggactaaaactgctatta 25486217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 50401538 - 50401438
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||||| |||| ||| |||||||||||||  |||| |||||||||||||| ||||||||||||||||  ||| ||||||||||||||| ||  |||||||    
T  50401538 gtggcacctcatttaaggtgtcacgtcagagtagaccgagtcaaaattggccttggggccaaaactgtcacaaatgcaaaacttagggggcggttttgta 50401439  T
Q  130 g 130  Q
    |    
T  50401438 g 50401438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 30849369 - 30849464
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| |||||||||||||| ||||||||||||| | ||| |||||||| |||| |||||||||||   |||||||||||||||||||    
T  30849369 ataacacgtggcacctcacttagggtgttacgtcagcatagaccaagttaaaattggccttgtgggccaaaactatcacagatgcaaaacttaggg 30849464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 23220739 - 23220649
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    ||||||||||| ||||||||||||| ||||||||| |||| ||| |||||||||||||| ||||||||||| || |||  |||||||||||    
T  23220739 aacatgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggtcttgggggccaaaaccgccacatgtgcaaaactta 23220649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 39642349 - 39642455
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg-tcttggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| ||||||  |||||||||||| | |||||||||||| |||||||||||||| | | |||||||||||||| ||| ||||||||||||||| ||  |    
T  39642349 aacacgtggcacttcacttagggtgccgcgtcagcatagaccgagtcaaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggt 39642448  T
Q  124 tttgtag 130  Q
    |||||||    
T  39642449 tttgtag 39642455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 46505311 - 46505416
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    ||||||||||| ||||||||||||||||||||| | || | |||| ||||||||||||| ||||||| ||||||  || |||||||||||| ||| || |    
T  46505311 aacatgtggcacctcacttagggtgtcacgtcaacgtaaaccgagccaaaattggtcttgggggccagaactgccgcaaatgcaaaacttatggaacagt 46505410  T
Q  124 tttgta 129  Q
    ||||||    
T  46505411 tttgta 46505416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 46572998 - 46572906
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||| |||||| |||||||||||| |||| ||||| |||| | |||||||||||| ||||||||| ||||||| ||| |||||||||||||||    
T  46572998 taacacgtggcacctcacttagggtctcacatcagcgtagaccaagtcaaaattggccttggggcc-aaactgccacaaatgcaaaacttaggg 46572906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 46573032 - 46573142
Alignment:
Q  88 ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactg 186  Q
    ||||||||||||||| |||||||||||||| ||| | ||||||        ||||||||  ||||||||||||||||| |||||||| |||| |||||||    
T  46573032 ccaaaactgctacagttgcaaaacttagggggcagtgttgtagttttttttcttaggggaccaaaatcgcaacttcgtaaaagttagaggacaaaaactg 46573131  T
Q  187 ctattaagcct 197  Q
    |||||||||||    
T  46573132 ctattaagcct 46573142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 8009880 - 8009796
Alignment:
Q  46 ggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||||||||  ||||||||||||||| ||||||  |||||||    
T  8009880 ggtgtcacgtcagcgtagaacgagtcaaaattggtcttggtggtcaaaactgtcacagatgcaaaacttcgggagcggttttgta 8009796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 15659130 - 15659238
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||| | ||||||||||||||| ||| | | |||||||||||||||||||||||| |||||||||  || ||| ||||||||||| ||| ||     
T  15659130 ataacacgtggaacctcacttagggtgtctcgttaacgtagatcgagtcaaaattggtcttgagggccaaaatcgccacatatgcaaaactttgggggcg 15659229  T
Q  122 attttgtag 130  Q
    |||||||||    
T  15659230 attttgtag 15659238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 25486479 - 25486531
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaatt 201  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  25486479 aaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcctaatt 25486531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 44436931 - 44436824
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    |||||| |||||| |||||||||||||  |||| ||| ||||||||||||||||||  ||||||| ||||||||  |||  ||||||||||||||  ||     
T  44436931 ataacacgtggcacctcacttagggtgcgacgtaagcgtagatcgagtcaaaattgaccttgggggcaaaactgtcacaagtgcaaaacttaggggacag 44436832  T
Q  123 ttttgtag 130  Q
    ||||||||    
T  44436831 ttttgtag 44436824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 3377714 - 3377825
Alignment:
Q  85 gggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaac 184  Q
    ||||||||||||||| || ||||||||||||||  |  ||||||||       | ||||||| ||||||| |||||| | |||||||||||| |||||||    
T  3377714 gggccaaaactgctaaagttgcaaaacttaggggacggttttgtagtttttttcctagggggccaaaatcacaactttgggaaagttagggggctaaaac 3377813  T
Q  185 tgctattaagcc 196  Q
    ||||||||||||    
T  3377814 tgctattaagcc 3377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 39642257 - 39642199
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||| ||| ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  39642257 ttagagggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcct 39642199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 14978989 - 14979114
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||||| |||||||| |||||| ||||||| |||||| ||  ||||||||       |||||| || |||||| |||||||| |||||||    
T  14978989 aaaattggccttggggtccaaaactactacagttgcaaaatttagggggcggttttgtagtatttttcttaggaggccaaaattgcaacttcatgaaagt 14979088  T
Q  171 taggggactaaaactgctattaagcc 196  Q
    |||||| | |||||| ||||||||||    
T  14979089 tagggggcgaaaacttctattaagcc 14979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 23891797 - 23891942
Alignment:
Q  46 ggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttaggg 144  Q
    |||||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||| |||| ||| ||| ||| |  ||||||||        ||  ||    
T  23891797 ggtgtcacgtcagcgtagaccgagtcaaaattggtcttgggagccaaaactgccacatatgcgaaagttatgga-cggttttgtagttttt---tttagg 23891892  T
Q  145 ggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    ||||||||||| || || |  |||||||||||||||||||||||||||||    
T  23891893 ggtcaaaatcgtaattttgaaaaagttaggggactaaaactgctattaag 23891942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 25085452 - 25085396
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||||||||||||||    
T  25085452 ggggtcaaaatcgcaactttatgaaagttagggggcgaaaactgctattaagcctaa 25085396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 41915779 - 41915839
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||| |||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  41915779 ttaggggatcaaaatcgcaacttcttgaaatataggggaccaaaactgctattaagcctaa 41915839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 1853610 - 1853699
Alignment:
Q  39 cacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||||||||||||||||| | |||| | ||||||| |||||||||||||||||| ||  ||| ||||||||||||||| ||| ||||||||    
T  1853610 cacttagggtgtcacgtcaacgtagaccaagtcaaa-ttggtcttggggccaaaattgtcacaaatgcaaaacttaggg-gcagttttgtag 1853699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 25085532 - 25085623
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaactt 113  Q
    |||||| |||||| ||||||||||||| ||||||||  |||| || |||||||||| ||||| ||||||||||||| |||| | ||||||||    
T  25085532 ataacacgtggcacctcacttagggtgccacgtcagtgtagaccgggtcaaaattgatcttgagggccaaaactgccacaggtacaaaactt 25085623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 6569660 - 6569738
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaactta 114  Q
    ||||||||| ||| ||||||||| |||| ||| ||||||||||||||| ||||||||||||| ||| ||| ||||||||    
T  6569660 ctcacttagagtgccacgtcagcgtagaccgaatcaaaattggtcttgagggccaaaactgccacaaatgtaaaactta 6569738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 41997752 - 41997637
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| ||||||||||| |  ||  ||||||||       |||| |||| |||||||||||||| |||||| ||||||| | ||||    
T  41997752 ggggccaaaactgctacagttgcaaaacttatgaggcggttttgtagttgttttcttatggggccaaaatcgcaactttgtgaaaattagggggcaaaaa 41997653  T
Q  184 ctgctattaagcctaa 199  Q
     ||||||||| |||||    
T  41997652 ttgctattaaacctaa 41997637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 46880896 - 46880974
Alignment:
Q  38 tcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttag 115  Q
    |||||||||||| ||||||||| |||| |||||| |||||||||||   || |||||||||||||||||||||| ||||    
T  46880896 tcacttagggtgccacgtcagcgtagaccgagtcgaaattggtcttacaggtcaaaactgctacagatgcaaaatttag 46880974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 3612454 - 3612503
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  3612454 caaaatctcaacttcttgaaacttaggggactaaaactgctattaagcct 3612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 17692886 - 17692725
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnn 135  Q
    ||||||||||||||||||||||| ||||  ||||||||| ||| |||||||   ||||| || ||| |||||||||||| || || ||||||||          
T  17692886 ctcacttagggtgtcacgtcagcgtagactgagtcaaaa-tggccttggggatgaaaaccgccacaaatgcaaaacttaaggggcgattttgtatttttt 17692788  T
Q  136 nncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
      |||||||||  |||||| |||||| | ||||||||||||  ||||| ||||||||| ||||    
T  17692787 ttcttagggggctaaaatcacaactttgagaaagttagggggttaaaattgctattaaaccta 17692725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 14190688 - 14190772
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaactt 113  Q
    |||||| || |||||| ||| ||| ||||| |||| ||||||||||||||  |||| |||||||||||| |||||||||||||||    
T  14190688 gtggcaccttacttagagtgccacatcagcgtagaccgagtcaaaattggcattggaggccaaaactgccacagatgcaaaactt 14190772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 27864280 - 27864185
Alignment:
Q  89 caaaactgctacagatgcaaaacttag-ggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaact 185  Q
    |||||||||||||| |||||||||||| || ||| ||||||||        ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  27864280 caaaactgctacagttgcaaaacttagaggggcagttttgtagtttttt--ttaggggatcaaaatcgcaacttcgtgaaagttaggagacgaaaact 27864185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 42924385 - 42924329
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||||||||||| |||||||||||||||||| || | |||||| |||||||||    
T  42924385 ttagggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaagc 42924329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 45739137 - 45739244
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| ||||||||||| || ||| |||||||         ||||| || |||||||||||||||||||||||||  |||| ||||    
T  45739137 ggggccaaaactgctacagttgcaaaacttatggggcagttttgtaatttttt--ttaggaggccaaaatcgcaacttcgtgaaagttaaaggacgaaaa 45739234  T
Q  184 ctgctattaa 193  Q
    || |||||||    
T  45739235 ctactattaa 45739244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 1096628 - 1096549
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattg-gtcttggggccaaaactgctacagatgcaaaacttag 115  Q
    |||||||||| || ||||||||| |||| |||||||||||||   || |||||||||||||| |||||||| ||||||||    
T  1096628 ctcacttaggatgccacgtcagcgtagaccgagtcaaaattgaccctaggggccaaaactgccacagatgcgaaacttag 1096549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 17760947 - 17761006
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||| ||||||| |||||||||| ||||||| | ||| ||||||||||||||||||    
T  17760947 cttaggggatcaaaattgcaacttcgtaaaagttaagagacgaaaactgctattaagcct 17761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 16545726 - 16545628
Alignment:
Q  32 ggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||| |||||||||||||  ||||||||||||| ||||||||||||    || ||||| |||||||  | |||||||||||||| || |||||||||||    
T  16545726 ggcacctcacttagggtgctacgtcagcatagaccgagtcaaaattaccattgggggcaaaaactgtcatagatgcaaaacttaaggggcaattttgta 16545628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 18632605 - 18632651
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||    
T  18632605 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 18632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 23220767 - 23220878
Alignment:
Q  88 ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgc 187  Q
    ||||||||||||||| || ||||||||||| ||  ||||||||       |  |||||  |||||||| |||||||| ||||||||||| | ||||||||    
T  23220767 ccaaaactgctacagttgtaaaacttagggggcggttttgtagtttttttcagaggggaccaaaatcgtaacttcgtaaaagttagggggcgaaaactgc 23220866  T
Q  188 tattaagcctaa 199  Q
    ||| ||||||||    
T  23220867 tatcaagcctaa 23220878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 46912332 - 46912422
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    |||| |||||| |||| |||||||| ||||||||| || |  |||||||||||||  || |||||||||||||| | ||||||||||||||    
T  46912332 aacacgtggcacctcatttagggtgccacgtcagcgtaaacagagtcaaaattggcattaggggccaaaactgccatagatgcaaaactta 46912422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 6320729 - 6320643
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtct-tggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||||||  |||||||||||| |||| |||||| ||||||||||  |||| ||||||| | |||||||||||| ||||||    
T  6320729 gtggcacctcacttag--tgtcacgtcagcgtagaccgagtcgaaattggtctaaggggtcaaaactaccacagatgcaaaatttaggg 6320643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 3612235 - 3612107
Alignment:
Q  66 cgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgt 164  Q
    |||||||||||||| || |||||||||||||| ||| | |||||| ||||||  | |||||||||        |||||||| |||||||||||||||| |    
T  3612235 cgagtcaaaattggcctaggggccaaaactgccacataggcaaaatttaggggacgattttgtagttttttttcttaggggttcaaaatcgcaacttctt 3612136  T
Q  165 gaaagttaggggactaaaactgctattaag 194  Q
     ||| ||||||| |||||| || |||||||    
T  3612135 aaaacttagggg-ctaaaattgttattaag 3612107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 5287831 - 5287887
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||| |||||||||||||| | |||||||| |||  |||||||||||||||||    
T  5287831 ttagggggccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaagc 5287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 7061367 - 7061427
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt 83  Q
    |||||| |||||| | ||||||||||| ||||||||| || ||||| ||||||||||||||    
T  7061367 ataacacgtggcaccgcacttagggtgccacgtcagcgtaaatcgaatcaaaattggtctt 7061427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 7579837 - 7579785
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaatt 77  Q
    ||||||||||| ||||||||||||| || |||||| |||| ||||||||||||    
T  7579837 aacatgtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaatt 7579785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 37008274 - 37008218
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||| ||||||||||||||| |||||  |||||| | ||||||||||||||||    
T  37008274 ttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagc 37008218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 367176 - 367235
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||| |||||||||||| || |||||  |||||||  |||||||||||||||||||    
T  367176 ttagggggccaaaatcgcaacctcttgaaatataggggatcaaaactgctattaagccta 367235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 3814817 - 3814758
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||| ||||||| ||||||| |||||  |||||| ||||| |||||||||||||||    
T  3814817 ttagggggccaaaatcacaacttcttgaaacatagggggctaaatctgctattaagccta 3814758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 3815053 - 3815112
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||| ||||||||||||||| |||||  ||||||   |||||||||||||||||||    
T  3815053 ttagggggccaaaatcgcaacttcttgaaacataggggttcaaaactgctattaagccta 3815112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 5287374 - 5287457
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactt 113  Q
    ||||| ||||||||||||| ||||||||| | || |||||||||||||  ||| |||||||||||  | ||| |||||||||||    
T  5287374 tggcacctcacttagggtgccacgtcagcgtggaccgagtcaaaattgaccttcggggccaaaacatccacatatgcaaaactt 5287457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 7060778 - 7060841
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg 86  Q
    |||||| | |||| ||||||||||||| ||||||||  |||| ||||||||||||| |||||||    
T  7060778 ataacacgcggcacctcacttagggtgccacgtcagtgtagaccgagtcaaaattgatcttggg 7060841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 12075013 - 12074958
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    |||||||||||||||||||||||| |||||  |||||  | |||||||||||||||    
T  12075013 ttagggggtcaaaatcgcaacttcttgaaacatagggagccaaaactgctattaag 12074958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 115
Target Start/End: Complemental strand, 14190660 - 14190629
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttag 115  Q
    ||||||||||||||||||||||||||||||||    
T  14190660 ggggccaaaactgctacagatgcaaaacttag 14190629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 50226450 - 50226391
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||| |||||||||||||| |  ||||||||||| |||||||||  |||||||||    
T  50226450 cttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgtaattaagcct 50226391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 51250539 - 51250484
Alignment:
Q  142 gggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||| |||||||||||||| |  ||||||||||| ||||||||| ||||||||||    
T  51250539 gggggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcct 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 6320769 - 6320815
Alignment:
Q  72 aaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||||    
T  6320769 aaaattggtctttggggccgaaactgctacagttgcaaaacttaggg 6320815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 16874561 - 16874511
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    ||||||| |||||||||||||| ||||||||||| | |||| |||||||||    
T  16874561 ggggtcataatcgcaacttcgtaaaagttagggggcgaaaattgctattaa 16874511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 32295209 - 32295267
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||||||||||||||||| |  ||||||  ||| |||||||| ||||||||||    
T  32295209 cttagggggtcaaaatcgcaactttgaaaaagtttaggggctaaaactcctattaagcc 32295267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 78
Target Start/End: Original strand, 36820290 - 36820320
Alignment:
Q  48 tgtcacgtcagcatagatcgagtcaaaattg 78  Q
    |||||||||||||||||||||||||||||||    
T  36820290 tgtcacgtcagcatagatcgagtcaaaattg 36820320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 46895801 - 46895855
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||||||||||||||| |||||  |||||| | |||||||| |||||||||    
T  46895801 ggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgcaattaagcct 46895855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 48319670 - 48319719
Alignment:
Q  146 gtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  48319670 gtcaaaatagcaactttgtgaaagtta-gggacgaaaactgctattaagcc 48319719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 51251382 - 51251431
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgcta 189  Q
    ||||| |||||||||||||||||||| ||||||||||| | ||||||||||    
T  51251382 ttaggaggtcaaaatcgcaacttcgtaaaagttagggg-caaaaactgcta 51251431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 2350093 - 2350150
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||||||||||||||||| | |||  ||| |||| ||||||| |||||||||    
T  2350093 ttagggggtcaaaatcgcaacttcttaaaacatagaggaccaaaactgttattaagcc 2350150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 5287308 - 5287247
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||| |||| ||||||||||||||||||||||||| ||| | || ||||  |||||||||||    
T  5287308 cttaaggggccaaaatcgcaacttcgtgaaagttaagggccgaacactgtaattaagcctaa 5287247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 10532269 - 10532212
Alignment:
Q  142 gggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||||||||||||||| | | | |||||||   ||||||||||||||||||||    
T  10532269 gggggtcaaaatcgcaacttcctaatacttagggggtcaaaactgctattaagcctaa 10532212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 11050432 - 11050476
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||    
T  11050432 caaaattgcaacttcgtgaaagtta-gggacgaaaactgctattaa 11050476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 23953111 - 23953160
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctatta 192  Q
    |||||||||||||||||||| |||||  |||||| | |||||||||||||    
T  23953111 ggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctatta 23953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 27864413 - 27864474
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||| |||||| ||||||| |  ||||||||||  ||||||||||| ||||||||||    
T  27864413 cttagggggccaaaattgcaactttggaaaagttagggagctaaaactgctgttaagcctaa 27864474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 46895486 - 46895437
Alignment:
Q  147 tcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||||||||| |||||  |||||| | |||||||||||||||||    
T  46895486 tcaaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcc 46895437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 46912238 - 46912193
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    ||||||||||||||||||||||||| ||  | ||||||||||||||    
T  46912238 caaaatcgcaacttcgtgaaagttaaggagcgaaaactgctattaa 46912193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 6183154 - 6183082
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  6183154 acatgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 6183082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 18216744 - 18216672
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaatgtt 210  Q
    ||||||||| |||||| | |||||| | |||||||| || | ||||||| |||||||||||||| ||| ||||    
T  18216744 cttagggggccaaaattgtaacttcataaaagttagagggcgaaaactgttattaagcctaatttttattgtt 18216672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 21727780 - 21727712
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||| ||||||||| | ||||||||||| | ||| || |||| ||||||||||    
T  21727780 gtggcacctcacttagggtgccacgtcagcgttgatcgagtcaacaatggactgggggtccaaaactgc 21727712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 33811593 - 33811525
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  33811593 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 33811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 34988258 - 34988170
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtct-tggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| ||  ||| |||||||||| | |||  ||||||||||||    
T  34988258 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgagggtccaaaactgccaaagaatcaaaacttaggg 34988170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 39427579 - 39427511
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||| ||||||||| | ||||||||||| | ||| || |||| ||||||||||    
T  39427579 gtggcacctcacttagggtgccacgtcagcgttgatcgagtcaacaatggactgggggtccaaaactgc 39427511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 48319578 - 48319514
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg 87  Q
    |||||| |||||| |||||||||| || ||||||||| | ||| ||||||||||||  |||||||    
T  48319578 ataacacgtggcacctcacttaggatgccacgtcagcgttgatagagtcaaaattgaccttgggg 48319514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 50503758 - 50503690
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaat 207  Q
    |||||||| ||||||||||||||| | |||  |||||||| |||| ||  |||||||||||| ||||||    
T  50503758 ttagggggccaaaatcgcaacttcttaaaacataggggaccaaaagtgaaattaagcctaataattaat 50503690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 23702274 - 23702449
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||||||||||||||||| || |||||||||||  ||||||||||||  ||||| |||||||||||  ||| |||||||||||||||  ||    
T  23702274 ataacacgtggcatctcacttagggtgccatgtcagcatagactgagtcaaaattgaccttggaggccaaaactgtcacaaatgcaaaacttaggggaca 23702373  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||        |||||||||  |||||||||||||   |||||||||||| ||||||||||||||||||||    
T  23702374 attttgtaatttttttcttagggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaagcct 23702449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 27545512 - 27545341
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaatt 124  Q
    |||| |||||| ||||||||||||| ||||||||| |||||||||| ||||||||  |||||||||||||||| | |||||||||||||||||  | |||    
T  27545512 aacacgtggcacctcacttagggtgccacgtcagcgtagatcgagttaaaattggctttggggccaaaactgccatagatgcaaaacttaggg-tcgatt 27545414  T
Q  125 ttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||        |||||||||| |||||||||||| |  ||||||||  | ||||||||||||||||||||||    
T  27545413 ttgtagtttttt--ttagggggtcgaaatcgcaactttggaaaagttagacggctaaaactgctattaagcctaa 27545341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 20853549 - 20853375
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| |||| || ||||| ||||||| | |||||| | ||||||||| |||||||| |||||||||| ||| ||||||||||||||| |   |    
T  20853549 aacacgtggcacctcattttgggtgccacgtcaacgtagatctattcaaaattgatcttgggggccaaaactgccacatatgcaaaacttagggggtggt 20853450  T
Q  124 tttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||        ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  20853449 tttgtagttttttt-ttagggggtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaagcctaa 20853375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 45177376 - 45177201
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||||||| || ||||||||||||| ||||||||  |||| |||||||||||| | |||| ||||||||||||  |||||||||||||||||||  |     
T  45177376 ataacatgtgacacctcacttagggtgccacgtcagtgtagaccgagtcaaaattagccttgagggccaaaactgtcacagatgcaaaacttaggggacg 45177277  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||        |||||||| ||||||||||||||| | |||||||||| | ||||| |||||||||||||    
T  45177276 attttgtagttttttttcttaggggatcaaaatcgcaactttgagaaagttaggaggctaaatctgctattaagcc 45177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 41487349 - 41487526
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||| ||||| ||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||     
T  41487349 ataacatatggcacctcacttagcgtgtcacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaacagctacagttgcaaaacttagggggcg 41487448  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
     ||||||||        |||| ||| | ||||||||||||| |  |||||||| || |||||||||||||||| |||||    
T  41487449 gttttgtagttttttttcttaagggct-aaaatcgcaactttggaaaagttagagggctaaaactgctattaaacctaa 41487526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 30539132 - 30539306
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| ||||||||||||| |||||||||||||| ||| |||||||||   || |||||||||||||| |||||||||||||||||||  |  |    
T  30539132 aacacgtggcacctcacttagggtgccacgtcagcatagaccgaatcaaaattgacattgggggccaaaactgccacagatgcaaaacttaggggacggt 30539231  T
Q  124 tttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||        ||||||||  |||||||||||||| | |||||||| ||| |||||||||||||||||||||    
T  30539232 tttgtagttttttttcttaggggaccaaaatcgcaactttgggaaagttaaggg-ctaaaactgctattaagccta 30539306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 6807315 - 6807480
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||||||| ||||  ||||||||||||  |||| ||| ||||||||| ||| ||||||||||||||| |   ||||||    
T  6807315 gtggcacctcacttagggtgccacgtcagcgtagacagagtcaaaattgaccttgagggacaaaactgccacaaatgcaaaacttagggggtggttttgt 6807414  T
Q  129 agnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||        |||| |||||||||| ||||||| | ||||||||||||||||||| ||||||||||||    
T  6807415 agtttttt--ttagagggtcaaaattgcaactttgggaaagttaggggactaaaattgctattaagcc 6807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 3676275 - 3676360
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttag 115  Q
    ||||| ||||||||||||| ||||||||| |||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  3676275 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggttttggggaccaaaactgccacagatgcaaaacttag 3676360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 26824023 - 26824149
Alignment:
Q  73 aaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagtt 171  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||| || ||||||||        ||||| ||||||||||||||||||||||||||||    
T  26824023 aaattggccttggggccaaaactgctatagttgcaaaacttaggga-cagttttgtagttttttttcttagagggtcaaaatcgcaacttcgtgaaagtt 26824121  T
Q  172 aggggactaaaactgctattaagcctaat 200  Q
    |||||   ||||||||||||| |||||||    
T  26824122 agggg-tgaaaactgctattatgcctaat 26824149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 37813247 - 37813338
Alignment:
Q  40 acttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||||||||| ||||||||| |||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||  ||||||||    
T  37813247 acttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 37813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 41487311 - 41487199
Alignment:
Q  86 ggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaac 184  Q
    ||||||||||||||||| |||||||||||||| ||  ||||||||        ||||||||||||||||||||||||||||||| || |||| | |||||    
T  41487311 ggccaaaactgctacagttgcaaaacttagggggcggttttgtagttttgtttcttagggggtcaaaatcgcaacttcgtgaaaattcgggggcgaaaac 41487212  T
Q  185 tgctattaagcct 197  Q
    |||||||||||||    
T  41487211 tgctattaagcct 41487199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 26823987 - 26823828
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnn 134  Q
    ||||||||||||||||||||| | ||||| || ||||||||||  |||||| |||||||||| ||| ||||||||||||||| |  |||||||||         
T  26823987 ctcacttagggtgtcacgtcaacctagattgaatcaaaattggcattggggcccaaaactgccacaaatgcaaaacttagggggtgattttgtagttttt 26823888  T
Q  135 nnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
       |||| ||||||||||||| ||||| | ||||||||| ||  ||||||||||||||||    
T  26823887 tttcttaaggggtcaaaatcgtaactttgagaaagttagagggttaaaactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 17071019 - 17070906
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||||    |||||| |        |||||||| ||||||||||||||||||||||||| ||| | ||||    
T  17071019 ggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaa 17070920  T
Q  184 ctgctattaagcct 197  Q
    ||||||||||||||    
T  17070919 ctgctattaagcct 17070906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 17577253 - 17577366
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||||    |||||| |        |||||||| ||||||||||||||||||||||||| ||| | ||||    
T  17577253 ggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaa 17577352  T
Q  184 ctgctattaagcct 197  Q
    ||||||||||||||    
T  17577353 ctgctattaagcct 17577366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 37940063 - 37939991
Alignment:
Q  45 gggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||| ||||||||| |||| |||||||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  37940063 gggtgccacgtcagcgtagaccgagtcaaaattggtcttggtgccaaaactgccacatatgcaaaacttaggg 37939991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 16982750 - 16982857
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    |||||| |||||| ||||||| ||||| ||||||||| ||||   |||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||      
T  16982750 ataacacgtggcacctcacttggggtgccacgtcagcgtagactaagtcaaaattggccttgggggcaaaactggcacagatgcaaaacttagggggcgg 16982849  T
Q  123 ttttgtag 130  Q
    ||||||||    
T  16982850 ttttgtag 16982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 197
Target Start/End: Original strand, 29044693 - 29044860
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| |||| |||||||  ||||||||| |||| |||||||||||||| ||| |||||||||||||| ||| |||||||||||| ||  || ||||||    
T  29044693 gtggcacctcatttagggtaccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttatgggacagttttgt 29044792  T
Q  129 agnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||       |||| |||  |||||||| |||||   | |||||||||| ||||||||||||||||||||    
T  29044793 aggttttttctta-gggaccaaaatcgtaactttagggaagttagggggctaaaactgctattaagcct 29044860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 6807296 - 6807170
Alignment:
Q  72 aaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagtt 171  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||| |   ||| ||||       ||||||||| |||||||||||||||| |||||||    
T  6807296 aaaattgatcttggggtcaaaactgctacagttgcaaaacttagggggtggttt-gtagtttttttcttagggggccaaaatcgcaacttcgagaaagtt 6807198  T
Q  172 aggggactaaaactgctattaagcctaa 199  Q
    | ||| | |||||| |||||||||||||    
T  6807197 atggggcaaaaactactattaagcctaa 6807170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 21486815 - 21486721
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||||||||||||||||||||| |||| | ||||||||||| |||||| |||||||| ||| |||| |||||||||||||| ||  ||||||||    
T  21486815 ctcacttagggtgtcacgtcagcgtagaccaagtcaaaattgatcttggaggccaaaaatgccacaggtgcaaaacttagggggcggttttgtag 21486721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 14880495 - 14880406
Alignment:
Q  38 tcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaatttt 126  Q
    ||||||||| || |||||||||||||| ||||||||||| || ||| |||||||||||||| |||||||||||| ||||||  |||||||    
T  14880495 tcacttaggatgccacgtcagcatagaccgagtcaaaatcggccttgggggccaaaactgccacagatgcaaaatttaggggacaatttt 14880406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 39889897 - 39889769
Alignment:
Q  72 aaaattggtcttggg--gccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    ||||||| |||||||  |||||||||||||||| ||||||||||| ||||| ||||||||        |||| |||| |||||| |||||||||||||||    
T  39889897 aaaattgatcttgggaggccaaaactgctacagttgcaaaacttatggagcgattttgta-attttttcttaaggggccaaaattgcaacttcgtgaaag 39889799  T
Q  170 ttaggggactaaaactgctattaagcctaa 199  Q
    ||| | | | ||||||||||||||||||||    
T  39889798 ttaagaggcgaaaactgctattaagcctaa 39889769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 44101431 - 44101520
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaactta 114  Q
    |||| ||||||  ||| ||||| |||||||||||| |  | |||||||||||||||| | ||||||||||||||||||||||||||||||    
T  44101431 aacacgtggcacttcatttaggatgtcacgtcagcgttaaccgagtcaaaattggtcgttgggccaaaactgctacagatgcaaaactta 44101520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 25144117 - 25144009
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||||||||||  ||||||||||||  |||||||| || | ||||||||||||||  ||||  ||||||||||| ||||||||||||||||| |  ||    
T  25144117 ataacatgtggcacatcacttagggtgcaacgtcagcgtaaaccgagtcaaaattggctttggatgccaaaactgccacagatgcaaaacttagtggcca 25144018  T
Q  122 attttgtag 130  Q
    |||||||||    
T  25144017 attttgtag 25144009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 36688153 - 36688311
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    ||||||||||||||||||| ||||||||| |||| | | |||||||||||||| ||||||||| |||       |  ||||||||||| |||||||| ||    
T  36688153 tggcatctcacttagggtgccacgtcagcgtagaccaaatcaaaattggtcttgggggccaaagctg-------tcaaaaacttaggg-gcaattttata 36688244  T
Q  130 gnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |       ||||||||||||||||| |||||| |  |||||||||||  ||||||||||||||||||    
T  36688245 gtttttttcttagggggtcaaaatcacaactttgaaaaagttagggggttaaaactgctattaagcc 36688311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 27545544 - 27545666
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||||| ||||||||||||||  || |||||||||||   | ||||||||       ||||||||| ||||||||||||||||||| |||    
T  27545544 aaaattggccttgggggccaaaactgctacaattgtaaaacttaggggatagttttgtagtttttttcttagggggccaaaatcgcaacttcgtgatagt 27545643  T
Q  171 taggggactaaaactgctattaa 193  Q
    |||||| | ||||| ||||||||    
T  27545644 tagggggcaaaaaccgctattaa 27545666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 33298507 - 33298422
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaactta 114  Q
    |||||| ||||||||||||| ||||||||| |||| ||| |||||||| | |||||| ||||||||||| |||||||| |||||||    
T  33298507 gtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattagacttgggagccaaaactgccacagatgccaaactta 33298422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 28349563 - 28349623
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||| |||||||||||||| | |||||||||||| |||||||| ||||||||||||    
T  28349563 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagccta 28349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 35213141 - 35213030
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||| ||||| ||||||||||| || ||| ||||||||        ||||||||||||||||||||||| || |||||||| || | ||||    
T  35213141 ggggccaaaactgttacagttgcaaaacttaaggggcagttttgtagtttttt--ttagggggtcaaaatcgcaactttgtcaaagttagtgggcgaaaa 35213044  T
Q  184 ctgctattaagcct 197  Q
    | ||||||||||||    
T  35213043 ccgctattaagcct 35213030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 33298545 - 33298651
Alignment:
Q  91 aaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctat 190  Q
    |||||||||| | |||||||||||||| ||  ||||||||       ||||||||| ||||||||||||||||||||||||||| | | |||||||||||    
T  33298545 aaactgctactgttgcaaaacttagggggcggttttgtagtttt---cttagggggccaaaatcgcaacttcgtgaaagttaggaggcgaaaactgctat 33298641  T
Q  191 taagcctaat 200  Q
     |||| ||||    
T  33298642 caagcataat 33298651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 37263416 - 37263349
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattatta 205  Q
    ||||||| ||||||||||||||||||| ||||||| ||| | |||||||||||||| ||| |||||||    
T  37263416 cttagggagtcaaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaaaccttattatta 37263349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 521591 - 521757
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||||||||| |||| ||| ||||||||| |||  ||||||||||| || ||||| |||||||| |||||||  ||||||||||| || ||  |||||||    
T  521591 tggcatctcatttagcgtgccacgtcagcgtagtccgagtcaaaatcggccttggaggccaaaattgctacaagtgcaaaacttatgg-gcggttttgta 521689  T
Q  130 gnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
            || |||||   |||||||||||||||||||| |||||||   ||||||||||||||||||    
T  521690 atttttttctcaggggtctaaaatcgcaacttcgtgaaaattagggggtgaaaactgctattaagcct 521757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 20228338 - 20228231
Alignment:
Q  89 caaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgct 188  Q
    |||||||| ||||| ||||||||||||| |||  ||||||||        ||  |||||||||||||||||||||| ||||||||| ||| ||||||| |    
T  20228338 caaaactgttacagttgcaaaacttaggaagctgttttgtagcatttttttttaggggtcaaaatcgcaacttcgtaaaagttaggagacgaaaactgtt 20228239  T
Q  189 attaagcc 196  Q
    ||||||||    
T  20228238 attaagcc 20228231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 39889919 - 39890005
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttag 115  Q
    |||| ||||||||||| ||||||||||||| || | |||||||||||||   |||| |||||||| ||| |||||||||||||||||    
T  39889919 gtggtatctcacttagagtgtcacgtcagcgtaaaccgagtcaaaattgacattggaggccaaaattgccacagatgcaaaacttag 39890005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 22192360 - 22192307
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctatt 191  Q
    ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||    
T  22192360 cttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctatt 22192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 199
Target Start/End: Original strand, 32071168 - 32071328
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnn 135  Q
    |||||||| ||||  | |||||| |||| ||||||||||||| |||||| | |||||||||  | | ||||||||||||||| ||  ||||||||         
T  32071168 ctcacttaaggtgatatgtcagcgtagaccgagtcaaaattgttcttggagaccaaaactgtcatatatgcaaaacttagggggcggttttgtagttttt 32071267  T
Q  136 nncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
      |||||||| |||||||||||||||    ||||||||||| ||||||||||||||||||||||    
T  32071268 t-cttagggg-tcaaaatcgcaactttagaaaagttagggg-ctaaaactgctattaagcctaa 32071328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 29657877 - 29657770
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt--ggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    |||| |||||| ||||||||||||||||||||||  |||| ||| |||||||||   ||  |||||||||||||| ||| |||||||| |||||| ||      
T  29657877 aacacgtggcacctcacttagggtgtcacgtcagtgtagaccgaatcaaaattgactttggggggccaaaactgccacatatgcaaaatttagggggcgg 29657778  T
Q  123 ttttgtag 130  Q
    ||||||||    
T  29657777 ttttgtag 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 37813220 - 37813161
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||| |||||||| || || |||||||||||||| | ||||||||||||||||||    
T  37813220 cttagggggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaagcct 37813161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 14880537 - 14880628
Alignment:
Q  85 gggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttagggg 176  Q
    ||||||||||||| |||| |||||||||||||  ||  |||||| |       ||||||||| |||||| ||||||||||||||||||||||    
T  14880537 gggccaaaactgcgacagttgcaaaacttaggaggcggttttgtggtttttttcttagggggccaaaattgcaacttcgtgaaagttagggg 14880628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 22846616 - 22846526
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaactta 114  Q
    |||| |||||| ||||||||||||| || |||||| |||| | | |||||||||  |||| ||||||||||||| | ||||||||||||||    
T  22846616 aacacgtggcacctcacttagggtgccatgtcagcgtagaccaattcaaaattgcccttgagggccaaaactgccaaagatgcaaaactta 22846526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 25897047 - 25896993
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||||||| |||||||||||||| |  ||||||||||| ||||||||||||||||    
T  25897047 ttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 26889648 - 26889702
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||||||||||||||||||||||| | |||  |||| ||||||||||||||||||    
T  26889648 ttagggggtcaaaatcgcaacttcttaaaacataggagactaaaactgctattaa 26889702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 41602878 - 41602928
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  41602878 aaaatcgcaactttttgaaacttagggggctaaaactgctattaagcctaa 41602928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 7010981 - 7010920
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||| |||||||||||| ||||| |||| ||  ||||||||||||||| |||||    
T  7010981 cttagggggtcagaatcgcaacttcttgaaacttagagggttaaaactgctattaaacctaa 7010920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 32768505 - 32768562
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    ||||||| |||||||||||||||||||||||| ||| | |  ||||||||||||||||    
T  32768505 cttagggagtcaaaatcgcaacttcgtgaaagctagagaatgaaaactgctattaagc 32768562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 5734326 - 5734398
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  5734326 acatgtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 5734398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 8834084 - 8834152
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||| | ||| || |||| ||||||||||    
T  8834084 gtggcacctcacttagggtgccacgtcagcatcgatcgagtcaacaatggactgggggtccaaaactgc 8834152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 9498962 - 9498906
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||||||||| ||| | ||||||| | ||||||| ||||||||||||    
T  9498962 ggggtcaaaatcgcaacttcctgatacttagggggccaaaactgttattaagcctaa 9498906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 9762375 - 9762283
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaactta 114  Q
    ||||||||||||| |||| |||  ||| ||||||||| ||||  || ||||||||| | |||| |||||||||||| | ||||||||||||||    
T  9762375 ataacatgtggcacctcatttaatgtgccacgtcagcgtagacagaatcaaaattgatattggaggccaaaactgccaaagatgcaaaactta 9762283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 16982684 - 16982624
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||  |||||| ||||||||||||||||||||||   ||||||||||| |||||||    
T  16982684 cttaggggaccaaaattgcaacttcgtgaaagttagggggtgaaaactgctatcaagccta 16982624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 22192451 - 22192531
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagg 116  Q
    ||||||||||||| ||| | ||| |||| |||||||||||||  |||||  |||||||| ||||||| |||||||||||||    
T  22192451 ctcacttagggtgccacataagcgtagaccgagtcaaaattgaccttggcagccaaaacggctacagttgcaaaacttagg 22192531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 23702181 - 23702121
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||  |||||||| ||||| |||||||||| ||| | |||||||||||||||||||    
T  23702181 cttaggggaccaaaatcgtaactttgtgaaagttaaggggcgaaaactgctattaagccta 23702121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 27339715 - 27339611
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaatt 124  Q
    |||||||||| ||||||||| ||| ||||||||||| || |||||||| | ||| || |||| |||||||||| | |||  |||||| ||||| || |||    
T  27339715 acatgtggcacctcacttagagtgccacgtcagcattgaccgagtcaacaatggactgggggtccaaaactgccaaagaatcaaaacatagggggctatt 27339616  T
Q  125 ttgta 129  Q
    |||||    
T  27339615 ttgta 27339611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 4132926 - 4132879
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||||||||| ||||||||||||| ||||||||||| || ||||||||    
T  4132926 acatgtggcacctcacttagggtgccacgtcagcattgaccgagtcaa 4132879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 18092959 - 18092908
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||||||||| || || ||||||| ||||||||||||||||| ||||    
T  18092959 caaaatcgcaacttcttgtaacttagggggctaaaactgctattaagtctaa 18092908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 41693228 - 41693185
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||||||||||||||||||| ||||||||| | |||||||||||    
T  41693228 gtggcatctcacttagggtgccacgtcagcgttgatcgagtcaa 41693185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 44269373 - 44269432
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||||||||||||||||||| | |||| |||||||  ||||| | |||||||||||    
T  44269373 cttagggggtcaaaatcgcaactttgagaaaattagggggttaaaattactattaagcct 44269432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 755960 - 755902
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||| ||||||||||||||| |||||  ||| || | ||||||||||||||||||    
T  755960 ttagggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaagcct 755902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 25897129 - 25897080
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg 87  Q
    |||||||||| || ||||||||| |||| ||||||||||||||||||||||    
T  25897129 ctcacttaggatgccacgtcagcgtaga-cgagtcaaaattggtcttgggg 25897080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 29657961 - 29658015
Alignment:
Q  145 ggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||||||  ||||||||||||  | |||||||||||||| |||||    
T  29657961 ggtcaaaatcgcaacttgatgaaagttagggagcgaaaactgctattaaacctaa 29658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 30539101 - 30539055
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||||||||||||||||| || ||||||||||| ||| ||||||||    
T  30539101 ggggccaaaactgctacagttgtaaaacttagggggcagttttgtag 30539055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 9762460 - 9762513
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||| ||||||||||||||||| ||||||||| | | |||| ||||||||||||    
T  9762460 ggggccaaaatcgcaacttcgtaaaagttaggtggcgaaaattgctattaagcc 9762513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 17512154 - 17512089
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattatt 204  Q
    |||||||| ||||||||||||||| |||||  |||||| | |||||||| |||| |||||| ||||    
T  17512154 ttagggggccaaaatcgcaacttcttgaaatatagggggccaaaactgcaattatgcctaaatatt 17512089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 29790932 - 29790839
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttag 115  Q
    |||||||||| ||  |||| ||||||| ||||||||| |||| | |||||||||||  || |||| |||||||||| |||  ||||||||||||    
T  29790932 ataacatgtgacacttcacatagggtgccacgtcagcgtagaccaagtcaaaattgacctcggggaccaaaactgccacatgtgcaaaacttag 29790839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 37263493 - 37263534
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcataga 64  Q
    |||||| |||||| ||||||||||||| ||||||||||||||    
T  37263493 ataacacgtggcacctcacttagggtgccacgtcagcataga 37263534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 5180752 - 5180692
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||| |||||||||||||| ||| ||| |||||||||   |||||||| |||||||||||    
T  5180752 ttaggaggtcaaaatcgcaagttcatgatagttagggggtcaaaactgcaattaagcctaa 5180692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 6745139 - 6745239
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| |||||||||| | |||  |||||| ||||||||  ||||||    
T  6745139 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgccaaagaatcaaaacatagggagctgttttgt 6745238  T
Q  129 a 129  Q
    |    
T  6745239 a 6745239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 8287749 - 8287817
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  8287749 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 8287817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 25144207 - 25144259
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaatt 201  Q
    ||||||||||||||||||| |||||| | | |||| ||||||||| |||||||    
T  25144207 aaaatcgcaacttcgtgaatgttaggaggcgaaaattgctattaaacctaatt 25144259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 30845726 - 30845622
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaatt 124  Q
    |||||||||| ||||||||||||| ||||||||| | || || ||||| | ||| || |||| |||||||||| | |||  |||||| ||||||||  ||    
T  30845726 acatgtggcacctcacttagggtgccacgtcagcgttgaccgggtcaacaatggactgggggtccaaaactgccaaagaatcaaaacatagggagctgtt 30845627  T
Q  125 ttgta 129  Q
    |||||    
T  30845626 ttgta 30845622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 37205686 - 37205754
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  37205686 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 37205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 41567088 - 41567128
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaatt 77  Q
    |||| ||| ||||||||||||||||||| ||||||||||||    
T  41567088 ctcatttaaggtgtcacgtcagcatagaccgagtcaaaatt 41567128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 41574323 - 41574255
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| |||||||| |||||||||||||| | ||||||||||| | ||| || |||| ||||||||||    
T  41574323 gtggcacctcacttatggtgtcacgtcagcgttgatcgagtcaacaatggactgggggtccaaaactgc 41574255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 44269278 - 44269350
Alignment:
Q  43 tagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    ||||||| ||| ||||| ||| |||||||||||||||  || |||||||||||| | ||| ||||||||||||    
T  44269278 tagggtgccacatcagcgtaggtcgagtcaaaattggcattgggggccaaaactaccacaaatgcaaaactta 44269350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 45457153 - 45457225
Alignment:
Q  47 gtgtcacgtcagcatagatcgagtcaaaatt-ggtcttggg-gccaaaactgctacagatgcaaaacttaggg 117  Q
    |||| |||||||| |||||| |||||||||| || |||||| | ||||||||| |||||||||||| ||||||    
T  45457153 gtgttacgtcagcgtagatcaagtcaaaattgggccttgggagtcaaaactgccacagatgcaaaatttaggg 45457225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 45515990 - 45515930
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||| ||||||||||||||| |  ||| ||| ||| |||||||||| |||||||||||    
T  45515990 ttaggggttcaaaatcgcaactttgaaaaaattaaggggctaaaactgcaattaagcctaa 45515930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 5470478 - 5470651
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| ||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||| |||||||| || ||  |    
T  5470478 aacacgtggcacctcacttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggt 5470577  T
Q  124 tttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||        |||||||| ||||||||||||||   |||||||||||| ||||||||||||| |||||||    
T  5470578 tttgtagttttttt-ttagggggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagccta 5470651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 39918609 - 39918434
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| |||||||||  ||| |||||||||||||| ||| ||||||||||| || ||| ||||||||||||| | ||     
T  39918609 ataacacgtggcacctcacttagggtgccacgtcagcgaagaccgagtcaaaattggccttgggggccaaaacagccacatatgcaaaacttagcgggcg 39918510  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||| ||        ||||||||| |||||||||||||| | |||||||||||| |||||||| ||||||||||    
T  39918509 attttgcagttttttttcttagggggccaaaatcgcaactttgagaaagttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 44617878 - 44618052
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||| || |||| |||||||| ||||||||| |||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||     
T  44617878 ataacaggtgacacctcatttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcg 44617977  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     |||||||        |||| |||  ||||||||||||||| |||||||||| ||  |||||||||||||||||||    
T  44617978 gttttgta-attttttcttaagggaccaaaatcgcaacttcttgaaagttagagggttaaaactgctattaagcct 44618052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 37431718 - 37431610
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||||| ||| |||||||||||||| ||| ||||||||||||| | ||     
T  37431718 ataacatgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagtgggcg 37431619  T
Q  122 attttgtag 130  Q
    |||||||||    
T  37431618 attttgtag 37431610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 34679272 - 34679096
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaactta-gggagc 120  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| || ||||||||| ||||||| |||||||||||| |||  ||||||||||| ||| ||    
T  34679272 ataacacgtggcacctcacttagggtgccacgtcagcgtagaccgggtcaaaatttgtcttggaggccaaaactgccacatgtgcaaaacttaggggggc 34679173  T
Q  121 aattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
      |||||||        |||||| || |||||||||||||| |  ||||||||||| ||||||||||||||||||||    
T  34679172 ggttttgtaatttttttcttaggtggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 34679096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 14489388 - 14489213
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||| ||||||| ||| ||||| |||| |||||||||||||||||||| || ||||||||| |||| |||||||||||||| ||     
T  14489388 ataacacgtggcacctcacgtagggtgccacatcagcgtagaccgagtcaaaattggtcttggaggtcaaaactgccacaggtgcaaaacttagggggcg 14489289  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     |||||||        |||| |||| ||||||| ||||||   ||||||||| || ||||||||||||||||||||    
T  14489288 gttttgtaatttttttcttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaagcct 14489213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 43028960 - 43028793
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg-tcttggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    ||||| ||||||||||||| ||||||||| |||| ||||||||||||||  || | |||||||||||| ||||||||||||||||||| |   |||||||    
T  43028960 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccctagaggccaaaactgccacagatgcaaaacttaggg-ggggttttgta 43028862  T
Q  130 g-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |        ||||||||| |||||||||||||| |   |||||||||| ||||||||||||||||||||    
T  43028861 gttttttttcttagggggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagcct 43028793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 14489413 - 14489527
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    |||||||||||||| |||| |||||||||||||| |  |||||||||       ||||||||  ||||||||||||||||||||||||||||| | ||||    
T  14489413 ggggccaaaactgccacagttgcaaaacttagggggtgattttgtagtttttttcttaggggc-caaaatcgcaacttcgtgaaagttagggggcgaaaa 14489511  T
Q  184 ctgctattaagcctaa 199  Q
    ||||||||||||||||    
T  14489512 ctgctattaagcctaa 14489527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 31827699 - 31827521
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt--ggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    ||||||||||| ||||||||||||| ||||||||| |||| ||| ||||||||| | ||  |||||||||||||  ||||||||||| ||||||| |  |    
T  31827699 aacatgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattgattttggggggccaaaactggcacagatgcaaagcttagggggtga 31827600  T
Q  123 ttttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaat 200  Q
    ||||||||        ||||||||| ||||||| |||||| |  ||||||||||   ||||||||||||||||||||||    
T  31827599 ttttgtagtcttttttcttaggggggcaaaatcacaactttggaaaagttagggagttaaaactgctattaagcctaat 31827521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 34761020 - 34760914
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||||||| || ||||||||||||| |||||||||||||| |  ||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||  |    
T  34761020 aacatgtgacacctcacttagggtgccacgtcagcatagaccacgtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggt 34760921  T
Q  124 tttgtag 130  Q
    |||||||    
T  34760920 tttgtag 34760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 5008429 - 5008520
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttag 115  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||  |||| ||||||||| ||| ||| |||||||||||||    
T  5008429 aacatgtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttag 5008520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 15023026 - 15023157
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    ||||||||||||||||  |||||| |||||||| | ||||||||||||  |  ||||||||       ||||||||||||||||| ||||||| ||||||    
T  15023026 aaaattggtcttggggggccaaaattgctacagttacaaaacttaggggacggttttgtagtttttttcttagggggtcaaaatcacaacttcttgaaag 15023125  T
Q  170 ttaggggactaaaactgctattaagcctaatt 201  Q
    ||||||| | ||||||||||||||||| ||||    
T  15023126 ttagggggccaaaactgctattaagccaaatt 15023157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 196
Target Start/End: Original strand, 34679294 - 34679404
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||||        |||||||| ||||||| ||||||||||||||||||||| | ||||    
T  34679294 ggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttttt--ttagggggccaaaatcacaacttcgtgaaagttagggggcaaaaa 34679391  T
Q  184 ctgctattaagcc 196  Q
    |||||||||||||    
T  34679392 ctgctattaagcc 34679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 6510201 - 6510310
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||||       ||||||| | ||||||||||||||| |||||||||| || | ||||    
T  6510201 ggggccaaaactgctacagttgcaaaacttagggggcggttttgtagcttttttcttagggtgccaaaatcgcaacttcatgaaagttagagggcgaaaa 6510300  T
Q  184 ctgctattaa 193  Q
    ||||||||||    
T  6510301 ctgctattaa 6510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 6592899 - 6592722
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| |||||||||||||  | |||||| ||||  ||||||||||| |  ||| ||||||||||||| ||| ||||||||||||||| ||| |    
T  6592899 aacacgtggcacctcacttagggtgcaatgtcagcgtagactgagtcaaaattagcattgagggccaaaactgccacatatgcaaaacttaggg-gcagt 6592801  T
Q  124 tttgtagnnnnnnn----cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||            |||||||||||||||||||||||| |  ||||||||||| |||||||||||||||||||||    
T  6592800 tttgtaaaaaaaaatcttcttagggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaagccta 6592722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 32969716 - 32969624
Alignment:
Q  39 cacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||||||| ||||||||||| |||| |||||||||||||| |||||| ||||||||||| ||| ||| ||||||||||| || |||||||||    
T  32969716 cacttagggcgtcacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacaaatgaaaaacttagggggcgattttgtag 32969624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 6510174 - 6510080
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||  ||||| | | ||||||| ||| |||||||| ||||||    
T  6510174 ataacatgtggcacctcacttagggtgccacgtcaacatagatcgattcaaaattgaccttggaggccaaactgccacatatgcaaaaattaggg 6510080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 18709356 - 18709247
Alignment:
Q  85 gggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaac 184  Q
    ||||||||||||||| || |||||||||||||| |  |||||||||        ||||| || |||||||| |||||||||||||||||||||| |||||    
T  18709356 gggccaaaactgctatagttgcaaaacttagggggtgattttgtagtttttt--ttaggaggccaaaatcgaaacttcgtgaaagttaggggacgaaaac 18709259  T
Q  185 tgctattaagcc 196  Q
    ||||||||||||    
T  18709258 tgctattaagcc 18709247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 4576682 - 4576854
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| |||| |||| |||| ||||||||||||||   ||||| |||||||||  ||  | |||||||||| ||  ||    
T  4576682 ataacacgtggcacctcacttagggtgccacgccagcgtagaccgagtcaaaattggcagtgggggccaaaactgtcacgaacgcaaaacttaagggaca 4576781  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||        ||| |||| |||||||||||||| | |||||||||||| |||||||||||||||||||    
T  4576782 attttgtagtttttta-ttaaggggccaaaatcgcaactttg-gaaagttaggggtctaaaactgctattaagcc 4576854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 4925648 - 4925755
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||        ||||| || ||||||||||||||||||||||||||||||| ||||    
T  4925648 ggggccaaaactgctacagttgcaaaacttaggg-gcgattttgtagtttttt--ttaggaggccaaaatcgcaacttcgtgaaagttaggggacaaaaa 4925744  T
Q  184 ctgctattaag 194  Q
     | ||||||||    
T  4925745 ttactattaag 4925755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 5362314 - 5362423
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg-tcttgg-ggccaaaactgctacagatgcaaaacttagggagc 120  Q
    ||||||||||||| |||||||||| |||||||||||| ||||  ||||||||||||| | |||| |||||||||||| |||| || |||||||| ||  |    
T  5362314 ataacatgtggcacctcacttaggatgtcacgtcagcgtagactgagtcaaaattggcttttggaggccaaaactgccacagttgtaaaacttaagggac 5362413  T
Q  121 aattttgtag 130  Q
    ||||||||||    
T  5362414 aattttgtag 5362423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 2609230 - 2609367
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| ||||||||||||| ||| ||||| |||| ||||||||||||| |||| |||| ||||||||| ||| ||| |||||||| || || ||    
T  2609230 aacacgtggcaactcacttagggtgccacatcagcgtagaccgagtcaaaattgatcttgggggtcaaaactgccacatatgtaaaacttatggggcgat 2609329  T
Q  124 tttgtagnnnnnnncttagggggtcaaaatcgcaactt 161  Q
    |||||||       ||||||||  ||||||||||||||    
T  2609330 tttgtagtttttttcttaggggaccaaaatcgcaactt 2609367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 8553683 - 8553790
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||   ||||| | ||||||||| ||| |||||||||||| || ||     
T  8553683 ataacacgtggcacctcacttagggtgtcacgtcagcatagaccgagtcaaa-ttgactttgggagacaaaactgccacaaatgcaaaacttaaggtgcg 8553781  T
Q  122 attttgtag 130  Q
    |||||||||    
T  8553782 attttgtag 8553790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 25411701 - 25411621
Alignment:
Q  38 tcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||| |||| |||||||||||||| ||||||||||||||| || ||||  |||||||| |||||||||||||||||||    
T  25411701 tcacttatggtgccacgtcagcatagaccgagtcaaaattggtattgggggtgaaaactgccacagatgcaaaacttaggg 25411621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 27489607 - 27489499
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||| || |||||||||| || ||||||||| || | |||||||||||||  ||||| |||||||||||| |||||||||||| |||||| | |    
T  27489607 ataacacgtgtcacctcacttaggatgccacgtcagcgtaaaccgagtcaaaattgcccttggaggccaaaactgccacagatgcaaaagttagggggta 27489508  T
Q  122 attttgtag 130  Q
    |||||||||    
T  27489507 attttgtag 27489499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 31827721 - 31827845
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||||| |  ||||||||        |||||| ||||| |||||||||||||| |||||    
T  31827721 aaaattggccttgggggccaaaactgctacagttgcaaaacttagggggtgattttgta-tttttttcttaggaggtcataatcgcaacttcgtaaaagt 31827819  T
Q  171 taggggactaaaactgctattaagcc 196  Q
    |||||| | |||| ||||||||||||    
T  31827820 tagggggcgaaaattgctattaagcc 31827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 34761060 - 34761177
Alignment:
Q  83 tggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaa 181  Q
    |||||||||||||||||||  |||||||||||||  ||  ||||||||        |||| || || |||||||||||||||||||||||||||||| ||    
T  34761060 tggggccaaaactgctacaattgcaaaacttaggtggcggttttgtagttctttttcttaaggagttaaaatcgcaacttcgtgaaagttaggggacgaa 34761159  T
Q  182 aactgctattaagcctaa 199  Q
    |||||||||||| |||||    
T  34761160 aactgctattaaacctaa 34761177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 37431739 - 37431848
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    |||||||||| |||||||| ||||||||||| || ||  ||||||||       |||||| || |||||||||||||||||| |||||||||| | ||||    
T  37431739 ggggccaaaaatgctacagttgcaaaacttaaggggcggttttgtagtttttttcttaggaggccaaaatcgcaacttcgtggaagttagggggcgaaaa 37431838  T
Q  184 ctgctattaa 193  Q
    ||||||||||    
T  37431839 ctgctattaa 37431848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 24472586 - 24472681
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| ||||||||||||| ||||| ||  ||||  |||||||||||||  |||| |||||||||||| |||||||||||||||||||    
T  24472586 ataacacgtggcacctcacttagggtgccacgttagtgtagacggagtcaaaattggcattggcggccaaaactgccacagatgcaaaacttaggg 24472681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 6592935 - 6593049
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||||        | ||||||  |||||||||||||||||||||||||| | | ||||    
T  6592935 ggggccaaaactgctacagttgcaaaacttagggggcagttttgtagttttttt-taagggggctaaaatcgcaacttcgtgaaagttaggtggcgaaaa 6593033  T
Q  184 ctgctattaagcctaa 199  Q
    || || ||||||||||    
T  6593034 ctactgttaagcctaa 6593049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 27489637 - 27489760
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag--nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggac--- 178  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||         |||||| || |||||||||||||||||||||| |||| |||       
T  27489637 ggggtcaaaactgctacagttgcaaaacttagggagcagttttgtagtttttttttcttaggaggccaaaatcgcaacttcgtgaaagataggagacgaa 27489736  T
Q  179 -taaaactgctattaagcctaatt 201  Q
      ||||||||||||||||||||||    
T  27489737 agaaaactgctattaagcctaatt 27489760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 37803297 - 37803118
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    |||||| ||| || || |||||||||| ||||||||| |||| |||||||||||||   |||||| ||||||||| ||| ||||||||||||||  ||      
T  37803297 ataacacgtgacaccttacttagggtgccacgtcagcgtagaccgagtcaaaattgacattggggtcaaaactgccacaaatgcaaaacttaggaggcgg 37803198  T
Q  123 ttttgtag--nnnnnnncttaggggg----tcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||         |||| ||||    | ||||||||||||| | |||||||||| |||||||||||||||||||||    
T  37803197 ttttgtagtttttttttcttaaggggctaattaaaatcgcaactttgagaaagttaggagactaaaactgctattaagcc 37803118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 5470453 - 5470333
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||||| ||||||||||||||  |||||||||||||| ||| ||||||||        |||| || | |||||||||||||||||||| |    
T  5470453 aaaattggccttgggggccaaaactgctacaattgcaaaacttagggggcagttttgtagtttttt--ttagaggataaaaatcgcaacttcgtgaaaat 5470356  T
Q  171 taggggactaaaactgctattaa 193  Q
     ||||||| ||||||||||||||    
T  5470355 aaggggacgaaaactgctattaa 5470333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 16043204 - 16043339
Alignment:
Q  66 cgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn----cttagggggtcaaaatcgcaact 160  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||| ||||| ||  || |||||           ||||||||| |||||||| ||||    
T  16043204 cgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggttctgtagtttttcttcttcttagggggccaaaatcgtaact 16043303  T
Q  161 tcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||||||||| | ||||||||| |||||||    
T  16043304 tcgtgaaagttagggggcgaaaactgctgttaagcc 16043339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 14943686 - 14943858
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| ||||||||||||| ||| ||||| |||| |||||||||||| | ||| |||||||||| ||| |||| |||||||||||| | ||  |    
T  14943686 aacacgtggcacctcacttagggtgccacatcagcgtagaccgagtcaaaattagccttgggggccaaaaatgccacaggtgcaaaacttagagggcggt 14943785  T
Q  124 tttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||       |||| | |  ||||||| |||||| |  ||||||| ||| ||||||||||||||||||||    
T  14943786 tttgtagtttttttctta-gagaccaaaatcacaactttggaaaagttaaggggctaaaactgctattaagcct 14943858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 25333666 - 25333578
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| || |||||||||| ||||||||| |||| | |||||||||||| ||||| | |||||||||| |||| ||||||||||||||    
T  25333666 gtggcaccttacttagggtgccacgtcagcgtagaccaagtcaaaattggccttggagaccaaaactgccacaggtgcaaaacttaggg 25333578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 35718857 - 35718966
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| ||||||||||||||  |  ||||||||       |||||| | |||| ||||||||||||||||||||||| | |  |||    
T  35718857 ggggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttttcttaggagatcaagatcgcaacttcgtgaaagttaggaggcggaaa 35718956  T
Q  184 ctgctattaa 193  Q
    ||||||||||    
T  35718957 ctgctattaa 35718966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 4925614 - 4925519
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| || |||||||||| ||||||||| ||||  ||  ||||||||||||| |||| ||||||||| ||| |||||||||||||||    
T  4925614 ataacacgtggcaccttacttagggtgccacgtcagcgtagacagaaccaaaattggtcttaggggtcaaaactgccacatatgcaaaacttaggg 4925519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 18709401 - 18709491
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggag 119  Q
    |||||| |||||||| ||||||||||||||||||| ||||| |||||||   |||||  |||||| |||||||| ||||||||||| ||||    
T  18709401 gtggcacctcacttaaggtgtcacgtcagcatagaccgagttaaaattgacattgggaaccaaaattgctacagttgcaaaacttaaggag 18709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 19895739 - 19895613
Alignment:
Q  72 aaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn--cttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    |||||||| |||||| |||||||||||| || ||||||||||| || || ||||| |||         ||||||||  ||||||||||| ||||| ||||    
T  19895739 aaaattggccttgggaccaaaactgctatagttgcaaaacttatggtgcgattttatagtttttttttcttaggggaccaaaatcgcaatttcgtaaaag 19895640  T
Q  170 ttaggggactaaaactgctattaagcc 196  Q
    ||||||||| ||||||| |||||||||    
T  19895639 ttaggggacgaaaactgatattaagcc 19895613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 12948946 - 12948885
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaat 200  Q
    |||||| ||||||||||||||||| | ||| ||||||| |||||||||||||||| ||||||    
T  12948946 ttagggtgtcaaaatcgcaacttcttaaaatttagggggctaaaactgctattaaacctaat 12948885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 19206253 - 19206140
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| || ||||||||||| |   ||||||||        |||||||| |||||||||||||| |||||| ||||||| | ||||    
T  19206253 ggggccaaaactgctacagttgtaaaacttagggggtggttttgtagttttttt-ttagggggccaaaatcgcaactttgtgaaaattagggggcgaaaa 19206155  T
Q  184 ctgctattaagccta 198  Q
     ||||||||||||||    
T  19206154 ttgctattaagccta 19206140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 20650428 - 20650367
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||| ||||||| ||||||| ||||| ||||||| ||||||||||||| ||||||||    
T  20650428 cttagggggccaaaatctcaacttcttgaaacttagggggctaaaactgctatgaagcctaa 20650367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 35718817 - 35718732
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaa 110  Q
    ||||||||||  |||||||||||| ||| ||| | ||||  ||||||||||||| ||||| |||||||||||| ||||||||||||    
T  35718817 acatgtggcaaatcacttagggtgccacatcaccgtagactgagtcaaaattggccttggaggccaaaactgccacagatgcaaaa 35718732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 36177038 - 36176981
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||  |||||||||||||||||||| |||| || |||||||||||||||||||    
T  36177038 ttagggggctaaaatcgcaacttcgtgaaacttagagggctaaaactgctattaagcc 36176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 24306158 - 24306222
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg 87  Q
    |||||||||| || ||||||||||||||||| ||||| |||||| |||||||||||  |||||||    
T  24306158 ataacatgtgacacctcacttagggtgtcacatcagcgtagatcaagtcaaaattgaccttgggg 24306222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 7464080 - 7464127
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||||||||| ||||||||||||||||||||||||| || ||||||||    
T  7464080 acatgtggcacctcacttagggtgtcacgtcagcattgaccgagtcaa 7464127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 14816054 - 14816113
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||| ||||||||||||||| |||||  |||||| | |||||||||||||||||||    
T  14816054 ttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 14816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 21358361 - 21358420
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||| ||||||| |||||| | |||||||||||| | ||||||||||||||||||    
T  21358361 cttagggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcct 21358420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 193
Target Start/End: Complemental strand, 4576669 - 4576546
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| ||  | |||||||||        ||||||||| ||||||  |||||| |  ||||    
T  4576669 aaaattggtcttgggggccaaaactgctacagttgcaaaacttatgggacgattttgtagttttttttcttagggggccaaaatgacaactttgaaaaag 4576570  T
Q  170 ttaggggactaaaactgctattaa 193  Q
    ||||| | ||||||||||||||||    
T  4576569 ttaggaggctaaaactgctattaa 4576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 25375129 - 25375191
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaat 200  Q
    ||||||||| |||||||||||| | |  ||| ||||||| |||||||||||||||||||||||    
T  25375129 cttagggggccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcctaat 25375191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 37803388 - 37803446
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||| |||||||||||||||||||| ||||||||||| | |||| || |||||||||    
T  37803388 cttaggaggtcaaaatcgcaacttcgtaaaagttagggggcgaaaattgttattaagcc 37803446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 43028994 - 43029104
Alignment:
Q  83 tggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaa 181  Q
    |||||||||||||||||||  || ||||||||||| ||  ||||||||        ||||||||| |||||||||||||| |||||||||| ||| | ||    
T  43028994 tggggccaaaactgctacaattgtaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagttaaggg-caaa 43029092  T
Q  182 aactgctattaa 193  Q
    ||||||||||||    
T  43029093 aactgctattaa 43029104  T

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Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 44297674 - 44297560
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| | |||||||||||| ||| ||||||||        |||||||| ||||||||||||||    ||| ||||| | ||||||    
T  44297674 ggggccaaaactgctacagttacaaaacttagggggcagttttgtagttttttt-ttagggggccaaaatcgcaacttttgaaaaattaggaggctaaaa 44297576  T
Q  184 ctgctattaagcctaa 199  Q
     |||||||||||||||    
T  44297575 gtgctattaagcctaa 44297560  T

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Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 32969794 - 32969843
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||| |||| ||||||||||||||| | |||||||||||||||||||    
T  32969794 aaaatcgaaactccgtgaaagttagggggcgaaaactgctattaagccta 32969843  T

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Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 5362233 - 5362173
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||| |||| |||||||||||||| |||||||||||||| | |||| | ||||||||||||    
T  5362233 cttatggggccaaaatcgcaactttgtgaaagttagggggcgaaaattactattaagccta 5362173  T

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Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 12949203 - 12949332
Alignment:
Q  69 gtcaaaattggtct-tggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaa 167  Q
    ||||||||||| || || |||||||||||| | ||| |||||||||| || ||| ||||||||       ||||| ||| ||| || |||||||| | ||    
T  12949203 gtcaaaattggcctatgcggccaaaactgccatagaggcaaaacttatggggcagttttgtagtttttttcttagtgggccaacattgcaacttctttaa 12949302  T
Q  168 agttaggggactaaaactgctattaagcct 197  Q
    | ||| |||| |||||||||||||||||||    
T  12949303 acttaagggattaaaactgctattaagcct 12949332  T

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Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 36195726 - 36195774
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg 79  Q
    ||||| ||||||||||||| ||||||||| |||| ||||||||||||||    
T  36195726 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgg 36195774  T

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Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 41196369 - 41196461
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    ||||||||||||| ||||||||||||| ||||||||| |||| | |||| ||||||   || ||||| |||||| | ||| ||||||||||||    
T  41196369 ataacatgtggcacctcacttagggtgccacgtcagcgtagaccaagtctaaattgacattgggggcaaaaacttccacatatgcaaaactta 41196461  T

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Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 25438 - 25379
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||| |||||||| ||||| | |||||||||||| | ||||||| ||||||||||    
T  25438 cttagggggccaaaatcgtaactttgggaaagttagggggcaaaaactgttattaagcct 25379  T

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Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 15023011 - 15022917
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg--ccaaaactgctacagatgcaaaacttaggg 117  Q
    |||| |||||| |||| |||||||| || |||||| ||||  |||||||| |||| |||||||  |||||||||| ||| |||||||| ||||||    
T  15023011 aacacgtggcacctcaattagggtgccatgtcagcgtagactgagtcaaatttggccttggggggccaaaactgccacaaatgcaaaatttaggg 15022917  T

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Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 32013218 - 32013293
Alignment:
Q  42 ttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagg 116  Q
    |||||||| ||||| ||| | || |||||||||||||  |||| |||||||||||||||||  |||||||||||||    
T  32013218 ttagggtgacacgtaagccttgaccgagtcaaaattgaccttgagggccaaaactgctacatttgcaaaacttagg 32013293  T

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Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 40711482 - 40711525
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||||| ||||||||||||||||||||||| | |||||||||||    
T  40711482 gtggcacctcacttagggtgtcacgtcagcgttgatcgagtcaa 40711525  T

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Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 8857221 - 8857127
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagg 116  Q
    |||||| |||||| |||| ||| |||| ||| ||||| | || | ||||||||||||  |||||| |||||||||| ||| ||||||||||||||    
T  8857221 ataacacgtggcacctcatttaaggtgccacatcagcgttgaccaagtcaaaattggcattgggggccaaaactgccacaaatgcaaaacttagg 8857127  T

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Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 14943594 - 14943556
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttagggg 176  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  14943594 cttagggtgtcaaaatcacaacttcgtgaaagttagggg 14943556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 19399316 - 19399370
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaatt 77  Q
    |||||| |||| | ||||||||||||| ||||||||| |||| ||||||||||||    
T  19399316 ataacacgtggaacctcacttagggtgccacgtcagcgtagaccgagtcaaaatt 19399370  T

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Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 25333749 - 25333807
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||||||||||||||| ||||| |||||||| || | ||||||  ||||||||||    
T  25333749 ttagggggtcaaaatcgcaatttcgttaaagttagagggcgaaaactattattaagcct 25333807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 36177351 - 36177405
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||| ||||||||||||||| ||||| ||| ||| ||||||||| ||||||||||    
T  36177351 ggggccaaaatcgcaacttcttgaaacttaaggggctaaaactgttattaagcct 36177405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 4856762 - 4856709
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||||||||||||| |||||  || ||| | |||||||||||||||||    
T  4856762 ggggtcaaaatcgcaacttcttgaaacataaggggccaaaactgctattaagcc 4856709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 19399441 - 19399490
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||| |||||| |  ||||||||||| ||||||||||||||||||||    
T  19399441 caaaatcacaactttgaaaaagttagggggctaaaactgctattaagcct 19399490  T

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Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 8857250 - 8857294
Alignment:
Q  86 ggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||||||||||||| || ||||||||||| || ||||||||||||    
T  8857250 ggccaaaactgctatagttgcaaaacttatggggcaattttgtag 8857294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 19399239 - 19399183
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||  |||||||||||||| | |||||||||| | |||||| |||||||||||    
T  19399239 ttaggggaccaaaatcgcaactttgagaaagttaggaggctaaaattgctattaagc 19399183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 19895761 - 19895845
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    ||||| |||||||||||||  ||||||||||| | ||| ||||||||||  || ||||| |||||||| ||| ||| ||||||||    
T  19895761 tggcacctcacttagggtgctacgtcagcataaaccgaatcaaaattggcattgggggctaaaactgccacatatgtaaaactta 19895845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 28851674 - 28851710
Alignment:
Q  140 tagggggtcaaaatcgcaacttcgtgaaagttagggg 176  Q
    |||||||||||||||||||| | ||||||||||||||    
T  28851674 tagggggtcaaaatcgcaacattgtgaaagttagggg 28851710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 34123409 - 34123341
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||| ||||||||||| || |||||||| | ||| || |||| ||||||||||    
T  34123409 gtggcacctcacttagggtgccacgtcagcattgaccgagtcaacaatggactgggggtccaaaactgc 34123341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 35500348 - 35500408
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||| ||||||||||||||| |||||  |||||  | |||||| |||||||||||||    
T  35500348 ttagggggccaaaatcgcaacttcttgaaacatagggccccaaaactactattaagcctaa 35500408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 40493814 - 40493726
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| |||||||||| | |||| |||||| |||||    
T  40493814 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgccaaagattcaaaacataggg 40493726  T

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Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 39574410 - 39574229
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||||||||||  ||||||| |||||||||||||| |||| |||||| ||||||||||| ||||||||||||||  || ||||||||||||||| |      
T  39574410 ataacatgtggcacgtcacttatggtgtcacgtcagcgtagaccgagtc-aaattggtcttgggggccaaaactgc--cacatgcaaaacttagggggtg 39574314  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaa 206  Q
    ||||| |||       ||||||| | |||||||||||||||||||||||||| || | |||||||||||||||| || |||||||    
T  39574313 attttatagtttttttcttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaagcttatttattaa 39574229  T

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Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 31080651 - 31080480
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| |||||||||||||| ||||| |||||||| ||| |||||||||||||| ||||||||||||||||||| |      
T  31080651 ataacacgtggcacctcacttagggtgccacgtcagcatagaccgagttaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtg 31080552  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
     ||||||||        ||||| ||||||||||||||||| |  |||||||| || ||||||||| ||||||    
T  31080551 gttttgtagttttttttttaggaggtcaaaatcgcaactttggaaaagttagagggctaaaactgatattaa 31080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 37897859 - 37898029
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    ||||||||||  |||||||| ||||  ||||||||||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||||| ||  |    
T  37897859 aacatgtggcgcctcacttaaggtgctacgtcagcatagaccgagtcaaaattggtcttggaggccaaaactgccacatatgcaaaacttaggg-gcggt 37897957  T
Q  124 tttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    |||||||        ||||||||| |||||||||||||| |  ||||||||||| |||||||||||||||||    
T  37897958 tttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaag 37898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 27904622 - 27904800
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| |||||||||||||||||| |||| ||||||||| |||  |||||||||||||| ||     
T  27904622 ataacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggacaaaactgccacaagtgcaaaacttagggggcg 27904721  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
     ||||||||        |||| |||| |||||||||||||| |  |||||||| || ||||||||||||||||||||||    
T  27904722 gttttgtagttttttttcttacggggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaagcctaa 27904800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 3333838 - 3334015
Alignment:
Q  21 atataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggag 119  Q
    ||||||||  ||||| ||||||||||||| ||||||||| |||| |||||||||||||  ||| |||||||||||||| ||| |||||||||||| ||||    
T  3333838 atataacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttatggag 3333937  T
Q  120 caattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |  ||||||||        ||||||||| |||||||||||||| |  ||||||||||| |||||||| ||||||||||    
T  3333938 cggttttgtagtttttcttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 9852961 - 9852853
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| ||||||||| |||||| |||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||     
T  9852961 ataacacgtggcacctcacttagggtgccacgtcagcgtagatcaagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttagggggcg 9852862  T
Q  122 attttgtag 130  Q
    |||||||||    
T  9852861 attttgtag 9852853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 24405657 - 24405488
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||||| ||||||||||| | ||||| |||||||| |||||||||||||| | ||||||||||||||| | |||||||||||||||   ||  |||||||    
T  24405657 gtggcacctcacttagggagccacgttagcatagaccgagtcaaaattggccatggggccaaaactgccaaagatgcaaaacttagttggcggttttgta 24405558  T
Q  130 g-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |        || |||| |||||||||||||||| |  |||||||||||||||||||||||||||| ||||    
T  24405557 gttttttttctcagggagtcaaaatcgcaactttgaaaaagttaggggactaaaactgctattaaaccta 24405488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 35166470 - 35166296
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||   |||  ||||||||| || |||  |||||||||||||| ||     
T  35166470 ataacatgtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattgaaggccaaaaccgccacatgtgcaaaacttagggggcg 35166371  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||||       ||||||||||||||||||||| || |  |||||||  || ||||||||||||||||||||    
T  35166370 attttgtagtttttttcttagggggtcaaaatcgcaattttggaaaagttaaagg-ctaaaactgctattaagcct 35166296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 20629883 - 20630057
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||| | ||| ||||||||||||||| ||     
T  20629883 ataacacgtggcacctcacttagggtgccacgtcagcgtagatcgagtcaaaattggtcctggaggccaaaacttccacaaatgcaaaacttagggggcg 20629982  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggg-gactaaaactgctattaag 194  Q
     ||||||||        |||| |||| ||||||| |||||| |  |||||||||| | |||||||||||||||||    
T  20629983 gttttgtagttttttttcttaaggggccaaaatcacaactttggaaaagttagggaggctaaaactgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 36798345 - 36798169
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||||| ||| ||||||||  |||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |      
T  36798345 ataacatgtggcacctcacttagagtgccacgtcagtgtagaccgagtcaaa-ttggtcttgggggccaaaactgccacagatgcaaaacttagggggtg 36798247  T
Q  122 attttgtag--nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     ||||||||         ||||||||| |||||| ||||||| |  ||||||| ||| ||||||||||||||||||||    
T  36798246 gttttgtagtttttttttcttagggggccaaaattgcaactttggaaaagttaagggtctaaaactgctattaagcct 36798169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 2974805 - 2974713
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||  || |||||||||||||| |||||||||||||||||||    
T  2974805 acatgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggccaaaactgccacagatgcaaaacttaggg 2974713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 35166494 - 35166610
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagtta-ggggactaaa 182  Q
    ||||||||||||||||||| |||||||||||||| |  |||||||||       ||||||||  ||||||||||||||||||||||||| |||| | |||    
T  35166494 ggggccaaaactgctacagctgcaaaacttagggggtgattttgtagtttttttcttaggggaccaaaatcgcaacttcgtgaaagttaggggggcgaaa 35166593  T
Q  183 actgctattaagcctaa 199  Q
    |||||||||||||||||    
T  35166594 actgctattaagcctaa 35166610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 40276170 - 40276345
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    ||||||||||| ||||||||||||||||||||||| |||| || ||||||||| | ||| |||| ||||| ||| ||| |||||||||||||||  |  |    
T  40276170 aacatgtggcacctcacttagggtgtcacgtcagcgtagaccgggtcaaaattagccttgggggtcaaaattgccacatatgcaaaacttaggggacggt 40276269  T
Q  124 tttgtag--nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||         |||||||||| |||||||||| || | ||||||||||||  |||||||||||||||||||    
T  40276270 tttgtagtttttttttcttagggggttaaaatcgcaaatttgggaaagttagggggataaaactgctattaagcct 40276345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 6130397 - 6130470
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactg 96  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||    
T  6130397 ataacatgtggcacctcacttagggtgtcacgtcaacatagaccgagtcaaaattgaccttggggccaaaactg 6130470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 3999198 - 3999089
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||     | |||||||||       ||||||||||||||||||||||||||||||||||||||| | ||||    
T  3999198 ggggccaaaactgctacagttgcaaaacttataagtcgattttgtagtttttttcttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaa 3999099  T
Q  184 ctgctattaa 193  Q
    ||||||||||    
T  3999098 ctgctattaa 3999089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 12406179 - 12406274
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| ||||||||||||| ||||||||| ||||  ||||||||||||| ||| |||||||||||||| ||||||| |||||||||||    
T  12406179 ataacacgtggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttaggg 12406274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 26702610 - 26702519
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactt 113  Q
    |||||| |||||| ||||||||||||| |||||||| ||||| ||| |||||||||||||| |||||||||||||| ||| |||||||||||    
T  26702610 ataacacgtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt 26702519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 26972343 - 26972252
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactt 113  Q
    |||||| |||||| ||||||||||||| |||||||| ||||| ||| |||||||||||||| |||||||||||||| ||| |||||||||||    
T  26972343 ataacacgtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt 26972252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 32391831 - 32391711
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||| |  |||||||||       |||| |||| ||||||| ||||||||||||||||| ||| | ||||    
T  32391831 ggggccaaaactgctacagttgcaaaacttagggggtgattttgtagtttttttcttaaggggccaaaatcacaacttcgtgaaagttaaggggcgaaaa 32391732  T
Q  184 ctgctattaagcctaattatt 204  Q
    |||||||||||| || |||||    
T  32391731 ctgctattaagcttatttatt 32391711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 32391858 - 32392033
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||||  | ||||||||  ||| |||||||||||| || ||     
T  32391858 ataacatgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttggatgtcaaaactgtcacacatgcaaaacttaaggggcg 32391957  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
     ||||||||        |||||||||  ||||||||||||| |  ||||||||||   |||||| |||||||||||    
T  32391958 gttttgtagttttttttcttagggggctaaaatcgcaactttgaaaaagttagggagttaaaacagctattaagcc 32392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 2974834 - 2974951
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn--cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaa 181  Q
    ||||||||||||||||||| |||||||||||||| ||  || |||||         ||| ||||| ||||||||||||||||||||||||||||| | ||    
T  2974834 ggggccaaaactgctacaggtgcaaaacttagggggcggttctgtagttttttttccttggggggccaaaatcgcaacttcgtgaaagttagggggcaaa 2974933  T
Q  182 aactgctattaagcctaa 199  Q
    ||||||||||||||||||    
T  2974934 aactgctattaagcctaa 2974951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 12406153 - 12406037
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||||||||||| ||||| |||||||||||||| ||  ||||||||        ||||||||| |||||||||||||| | |||||||||||| |||||    
T  12406153 ggggccaaaactg-tacagttgcaaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaaagttagggggctaaa 12406055  T
Q  183 actgctattaagcctaat 200  Q
    ||||||||||||||||||    
T  12406054 actgctattaagcctaat 12406037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 193
Target Start/End: Original strand, 19131661 - 19131809
Alignment:
Q  45 gggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagg 143  Q
    ||||| ||||||||| |||| |||||||||||||| ||| |||||||||||||  ||||||||||||||||||| ||  ||||||||        |||||    
T  19131661 gggtgccacgtcagcgtagaccgagtcaaaattggccttcggggccaaaactgtcacagatgcaaaacttagggggcggttttgtagttttttt-ttagg 19131759  T
Q  144 gggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||  |||||||||||||    |||||||| |||||||||||||||||||    
T  19131760 gggcaaaaatcgcaactttagaaaagttagaggactaaaactgctattaa 19131809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 43098166 - 43098337
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| | |||| ||||||||||||| ||||||||| ||||  |||||||||||| | | |||| ||||||||||||||| ||||||||||| || ||     
T  43098166 ataacacgcggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattgatatcgggggccaaaactgctacaggtgcaaaactta-ggcgcg 43098264  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
     ||||||||        ||||||||  ||||||| ||||| |  ||||||||||||||||||||||||||||||    
T  43098265 gttttgtagttttttt-ttagggggcaaaaatcgtaactttgaaaaagttaggggactaaaactgctattaagc 43098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 20512371 - 20512264
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| || || ||| |||| |||||||||||||||||| |||| ||||||| | |||| |||||||||||||| |||    
T  20512371 ataacacgtggcacctcacttagggtgccatgttagcgtagaccgagtcaaaattggtcttgggggtcaaaactaccacaggtgcaaaacttagggggca 20512272  T
Q  122 attttgta 129  Q
     |||||||    
T  20512271 gttttgta 20512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 3999237 - 3999331
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagg 116  Q
    ||||||||||||| |||||||| |||| ||||||||| |||| | |||||||||||| ||| |||||||||||||| ||| ||| ||||||||||    
T  3999237 ataacatgtggcacctcacttaaggtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccacatatgtaaaacttagg 3999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 18403147 - 18403053
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||||||||||| ||||||| | ||||  ||||||||||||||||| |||| ||||||||| | |||||||||||||||||||  |||||||||    
T  18403147 ctcacttagggtgccacgtcaacgtagactgagtcaaaattggtcttgggggtcaaaactgccagagatgcaaaacttagggagtgattttgtag 18403053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 22300775 - 22300600
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||||||||| ||||||| | |||| ||||||||||||||||||||  | ||||||||| ||| || ||||||||| ||  |     
T  22300775 ataacatgtggcacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggtcttggaagtcaaaactgccacatatacaaaacttaagggacg 22300676  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     ||||||||        |||||| | ||||||||||||||    |||||||| || |||||||| |||||||||||    
T  22300675 gttttgtagttttttttttagggtgccaaaatcgcaactttagaaaagttagagggctaaaactactattaagcct 22300600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 25910898 - 25910805
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttag 115  Q
    |||||||||| || ||||||||||||| ||||||||| |||| |||||||||||||  ||| |||||||||||||| |||| ||||||| ||||    
T  25910898 ataacatgtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacaggtgcaaaatttag 25910805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 36798377 - 36798491
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||| ||        ||||||||  |||||||||||||| | |||||||||||| |||||    
T  36798377 ggggccaaaactgctacagttgcaaaacttagggggcggttttgcagttttttttcttaggggaccaaaatcgcaactttgagaaagttagggggctaaa 36798476  T
Q  183 actgctattaagcct 197  Q
    |||||||||||||||    
T  36798477 actgctattaagcct 36798491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 3333804 - 3333695
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||  |||||||||||| |  |  ||||||||       |||||||| |||||||||||||||| ||||||||||||| | ||||    
T  3333804 ggggccaaaactgctacatttgcaaaacttagaggacggttttgtagtttttttcttaggggatcaaaatcgcaacttcatgaaagttagggggcgaaaa 3333705  T
Q  184 ctgctattaa 193  Q
    ||||||||||    
T  3333704 ctgctattaa 3333695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 19340873 - 19340767
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||         |||||||||||||||||||| || |  ||||||||||| ||||||    
T  19340873 ggggccaaaactgctacagttgcaaaacttagggggcgattttgtaattttt---ttagggggtcaaaatcgcaattttggaaaagttagggggctaaaa 19340777  T
Q  184 ctgctattaa 193  Q
    ||||||||||    
T  19340776 ctgctattaa 19340767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 42586043 - 42585984
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||||||||||||||||||| |||||  |||||| | |||||||||||||||||||    
T  42586043 ttagggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 42585984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 43098086 - 43098031
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  43098086 cttacgggatcaaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaa 43098031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 19340903 - 19340997
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagg 116  Q
    |||||| |||||| |||| |||||||| ||||||| | | || ||||||||||||||  |||||| | |||||||| ||||||||||||||||||    
T  19340903 ataacacgtggcacctcatttagggtgccacgtcaacgttgaccgagtcaaaattggctttggggactaaaactgccacagatgcaaaacttagg 19340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 20629794 - 20629733
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||| ||||||||||||| |||||||||| ||| | |||||||||||||| |||||    
T  20629794 cttagggggttaaaatcgcaactttgtgaaagttaaggggcgaaaactgctattaaacctaa 20629733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 24779448 - 24779355
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttag 115  Q
    |||||| ||| || ||||||| ||||| ||||||||| |||| ||||||||||||||| |||||  |||||||||| | ||| |||||||||||    
T  24779448 ataacacgtgacaactcacttggggtgccacgtcagcgtagaccgagtcaaaattggttttgggaaccaaaactgccatagaggcaaaacttag 24779355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 36361090 - 36361029
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaat 200  Q
    ||||||| |||||||||||||||| |||||  |||||||| |||||||| ||||||||||||    
T  36361090 ttaggggatcaaaatcgcaacttcttgaaacataggggaccaaaactgcaattaagcctaat 36361029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 6464332 - 6464392
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||| ||||||||||||||| |||||  |||||| | ||||||||||||||||||||    
T  6464332 ttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcctaa 6464392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 20364739 - 20364679
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||||||||||||| ||| | |||||||   ||||||||||||||||||||    
T  20364739 ttagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctattaagcctaa 20364679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 22408803 - 22408863
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||||||||||||| ||| ||  ||||||| ||||||||| ||||||||||    
T  22408803 ttagggggtcaaaatcgcaacttcctgacaggcaggggaccaaaactgcttttaagcctaa 22408863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 16132930 - 16133045
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag--nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaa 181  Q
    |||||||||||||||||||  |||||| |||||| ||||||||||||         |||||||||  ||||||||||||||||||||||| || | | ||    
T  16132930 ggggccaaaactgctacagtggcaaaatttagggggcaattttgtagttcttttttcttagggggctaaaatcgcaacttcgtgaaagttgggaggcgaa 16133029  T
Q  182 aactgctattaagcct 197  Q
    |||  |||||||||||    
T  16133030 aaccactattaagcct 16133045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 40132955 - 40132904
Alignment:
Q  145 ggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||||||||||| |  |||||||| ||||||||||||||||||||||    
T  40132955 ggtcaaaatcgcaactttgaaaaagttagaggactaaaactgctattaagcc 40132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 20512460 - 20512514
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||| ||||||||||||||||||||||||| | | | ||||||||||||||||||    
T  20512460 ggggccaaaatcgcaacttcgtgaaagttaagaggcgaaaactgctattaagcct 20512514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 586677 - 586726
Alignment:
Q  147 tcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||||||||||| |||||||||| |||| |||| ||||||||||||    
T  586677 tcaaaatcgcaacttcatgaaagttagaggacgaaaattgctattaagcc 586726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 24779530 - 24779591
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||| |||| ||||||||||||  | | ||||||||||||| ||||||||||||||||||||    
T  24779530 cttaaggggccaaaatcgcaacagcataaaagttaggggacgaaaactgctattaagcctaa 24779591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 25363986 - 25363905
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattg-gtcttggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||| |||||||||||||||||| |||| ||| |||||||||  | |||||||||||||| | |||  ||||||||||||||    
T  25363986 ctcatttagggtgtcacgtcagcgtagaccgaatcaaaattgacttttggggccaaaactaccacaattgcaaaacttaggg 25363905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 25910992 - 25911037
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||    
T  25910992 aaaatctcaacttcgtgaaagttagggggcgaaaactgctattaag 25911037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 30603725 - 30603680
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||    
T  30603725 ggggccaaaactgctacagttgcaaaacttagggggcagttttgta 30603680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 40276131 - 40276017
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgt-agnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||||||||||||||||| ||||||||||||||  | ||||||| |        ||||| |||  ||||||||||||||  |||||||||||| | |||    
T  40276131 ggggccaaaactgctacagttgcaaaacttaggggacgattttgtaattttttttcttagagggctaaaatcgcaacttcacgaaagttaggggccgaaa 40276032  T
Q  183 actgctattaagcct 197  Q
    |||| ||||||||||    
T  40276031 actgatattaagcct 40276017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 28446179 - 28446087
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    |||||| ||| || ||||| |||||||||| |||||| || | |||||||||||||| ||| ||||||||| |||  ||| ||||||||||||    
T  28446179 ataacacgtgacacctcacgtagggtgtcaggtcagcgtataccgagtcaaaattggccttaggggccaaagctgtcacaaatgcaaaactta 28446087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 28736608 - 28736508
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||||||| | || |||||||| ||||| || |||| |||||||||| | |||  |||||| ||||| || |||||||    
T  28736608 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacattggactgggggtccaaaactgccaaagaatcaaaacatagggggctattttgt 28736509  T
Q  129 a 129  Q
    |    
T  28736508 a 28736508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 34320017 - 34319958
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||| |||||||||||||||  |||||||||||| | ||||||||||||| |||||    
T  34320017 cttagggggccaaaatcgcaacttcaagaaagttagggg-cgaaaactgctattatgccta 34319958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 35877540 - 35877592
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    ||||||||||| ||||| ||||||||||||||||   ||||||||||||||||    
T  35877540 ggggtcaaaattgcaacctcgtgaaagttagggggtgaaaactgctattaagc 35877592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 4096619 - 4096552
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgc 97  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| || ||| ||||||||||    
T  4096619 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactggggtccaaaactgc 4096552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 16132911 - 16132824
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||| |||||||||| || ||| ||||| ||||   |||||||||||| ||||||| |||||||||| | || ||||||||||||||    
T  16132911 tggcacctcacttaggatgccacatcagcgtagacaaagtcaaaattggccttggggaccaaaactgccataggtgcaaaacttaggg 16132824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 18403246 - 18403304
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||| ||||||||||||| | ||||||||||| | | ||||||||||||||||||    
T  18403246 cttagggggccaaaatcgcaact-catgaaagttaggtggcgaaaactgctattaagcct 18403304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 20126495 - 20126436
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||||||||||| ||||||| |||||  |||||| | |||||| ||||||||||||    
T  20126495 ttagggggtcaaaatcacaacttcttgaaacatagggggccaaaactcctattaagccta 20126436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 26563038 - 26562987
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||| |||||| |  |||||||| |||||||||||||||||||||||||    
T  26563038 caaaatcacaactttggaaaagttagcggactaaaactgctattaagcctaa 26562987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 26563162 - 26563075
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaa 110  Q
    ||||| |||||| ||||| ||||||| |||||||||  | | |||||||||||||  ||| |||||||||| ||| ||||||||||||    
T  26563162 taacacgtggcacctcacgtagggtgccacgtcagcggaaaccgagtcaaaattgaccttgggggccaaaattgccacagatgcaaaa 26563075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 35678225 - 35678272
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||||||||| ||||||||||||||||||||||| | || ||||||||    
T  35678225 acatgtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 35678272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 39528938 - 39528891
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||||||||| ||||||||||||||||||||||| | || ||||||||    
T  39528938 acatgtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 39528891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 25364082 - 25364136
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||||||| |||||| ||||||||||||||||||| ||   ||||||||||||||    
T  25364082 ttagggggccaaaattgcaacttcgtgaaagttagagggtgaaaactgctattaa 25364136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 28446192 - 28446238
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  28446192 aaaattgatcttgggggccaaaactgctacagttgcaaaacttaggg 28446238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 31156936 - 31156874
Alignment:
Q  144 gggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaa 206  Q
    ||||||||||||||||||||||||||||| |     ||||||| |||||||||||| ||||||    
T  31156936 gggtcaaaatcgcaacttcgtgaaagttaagatgaaaaaactgttattaagcctaactattaa 31156874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 40133140 - 40133190
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||| |||||||||||||| | |||||||||||| |||||| |||||||||    
T  40133140 ggggccaaaatcgcaactttgggaaagttagggggctaaaattgctattaa 40133190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 6130367 - 6130334
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||||||||||| ||||||||||||||    
T  6130367 ggggccaaaactgctacagttgcaaaacttaggg 6130334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 21066541 - 21066586
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    ||||||||||||||||||| ||||||||||| |||||  |||||||    
T  21066541 ggggccaaaactgctacagttgcaaaacttaaggagcggttttgta 21066586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 24242074 - 24242037
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttagggg 176  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  24242074 ttagggggtcaaaatcgcacctttgtgaaagttagggg 24242037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 10029217 - 10029285
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  10029217 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 10029285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 13960831 - 13960903
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||| ||| ||||| | ||||||||||| | ||| || |||| ||||||||||    
T  13960831 acatgtggcacctcacttagggtgccacatcagcgttgatcgagtcaacaatggactgggggtccaaaactgc 13960903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 22300814 - 22300846
Alignment:
Q  85 gggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||||||||||||||| ||||||||||||||    
T  22300814 gggccaaaactgctacagttgcaaaacttaggg 22300846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 42739732 - 42739820
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| |||||||||| | |||| |||||| |||||    
T  42739732 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgccaaagattcaaaacataggg 42739820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 42947573 - 42947501
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  42947573 acatgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 42947501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 28350259 - 28350115
Alignment:
Q  55 tcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaa 152  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||| ||  ||||||||        ||||||||| |||||    
T  28350259 tcagcgtagatcgagtcaaaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaa 28350160  T
Q  153 tcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||    
T  28350159 tcgtaacttcgtgaaagttagggggctaaaactgctattaagcct 28350115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 15107131 - 15107305
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||||||||| ||| ||||  |||| ||||||||||||||  |||| |||||||||||| ||| ||||||||||||||||||     
T  15107131 ataacatgtggcacctcacttagggtgccacatcagtgtagaccgagtcaaaattggcattggaggccaaaactgccacaaatgcaaaacttagggagcg 15107230  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
     ||||||||        |||||||| |||||||| ||||| |  ||| |||||||  ||||||||||||||||||||    
T  15107231 gttttgtagtttttt--ttagggggccaaaatcgtaactttggaaaaattaggggggtaaaactgctattaagccta 15107305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 44312882 - 44312988
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    ||||||||||||| ||||||||||||| || ||||||||||| |||||||||||||||||||  ||||||||||  ||| ||||||||||||||  |||     
T  44312882 ataacatgtggcacctcacttagggtgacatgtcagcatagaccgagtcaaaattggtcttgaagccaaaactgtcacaaatgcaaaacttaggaggcag 44312981  T
Q  123 ttttgta 129  Q
    |||||||    
T  44312982 ttttgta 44312988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 28350307 - 28350436
Alignment:
Q  46 ggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggg 145  Q
    |||||||||| ||| ||||  ||||||||||||| ||||||||||||||||| |||| |||||||||||||| ||  ||||||||       ||||||||    
T  28350307 ggtgtcacgttagcgtagacagagtcaaaattggccttggggccaaaactgccacaggtgcaaaacttaggg-gcggttttgtagtttttttcttagggg 28350405  T
Q  146 gtcaaaatcgcaacttcgtgaaagttagggg 176  Q
    | |||| ||||||||||||||||||||||||    
T  28350406 gccaaagtcgcaacttcgtgaaagttagggg 28350436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 195
Target Start/End: Complemental strand, 28472560 - 28472391
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    ||||||||||| |||| | |||||||||||||| | |||| ||| |||||||||||||| ||||| |||||||| ||| | ||||||||||  | || ||    
T  28472560 aacatgtggcacctcattcagggtgtcacgtcaacgtagaccgaatcaaaattggtcttgggggcgaaaactgccacataagcaaaacttatagggcgat 28472461  T
Q  124 tttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||       |||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||    
T  28472460 tttgtag-ttttttcttagggggtcaaaatcgcaactttggaaaagttagggg-ctaaaactgctattaagc 28472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 41243803 - 41243642
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnn 135  Q
    ||||||||||||| ||||||| | |||| |||||||||||||| ||||||| | |||||||| ||| ||||||||||||||| ||  ||||||||         
T  41243803 ctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttggggacaaaaactgccacaaatgcaaaacttaggg-gcggttttgtagttttt 41243705  T
Q  136 nncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
      |||||||||  ||||| ||||||| |  ||||||||||| |||||||||||||||||||||    
T  41243704 ttcttagggggctaaaattgcaactttggaaaagttagggggctaaaactgctattaagccta 41243642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 36903437 - 36903342
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||||| ||||||||||||| || |||||| |||| |||||||||||||| |||| ||||||||||||| ||||||| |||||||||||    
T  36903437 ataacatgtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaattggccttgagggccaaaactgccacagatggaaaacttaggg 36903342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 194
Target Start/End: Complemental strand, 47909848 - 47909696
Alignment:
Q  43 tagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnnctta 141  Q
    |||||| ||| |||||| |||| |||||||||||||  ||||   ||||||| ||| ||||||||||||||||||| || |||||||||       ||||    
T  47909848 tagggtatcatgtcagcgtagaccgagtcaaaattgaccttgaaagccaaaattgccacagatgcaaaacttagggggcgattttgtagtttttttctta 47909749  T
Q  142 gggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    |||||  ||||||||||||| | |||||||||||| |||||||||||||||||    
T  47909748 gggggctaaaatcgcaactttgggaaagttagggggctaaaactgctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 4049923 - 4050036
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||| ||||||| ||  ||||||||       ||||||||| ||||||| ||||||||||||||||| ||| | ||||    
T  4049923 ggggccaaaactgctacagttgcaaaccttagggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaagttaaggggcgaaaa 4050022  T
Q  184 ctgctattaagcct 197  Q
    ||||||||||||||    
T  4050023 ctgctattaagcct 4050036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 6726401 - 6726573
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||||| ||||||||||||| ||||||||| || |  ||||||||||||  ||||||| ||||||||| |||  |||||||||||||| |  ||||||||    
T  6726401 gtggcacctcacttagggtgccacgtcagcgtaaactgagtcaaaattgtccttgggggcaaaactgccacatgtgcaaaacttagggggtgattttgta 6726500  T
Q  130 gnnnnnnn------cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |             ||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  6726501 gtttttttttctttcttagggggcctaaatcgcaacttcgtgaaagttaggggacaaaaacagctattaagcc 6726573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 192
Target Start/End: Original strand, 21505755 - 21505927
Alignment:
Q  21 atataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggag 119  Q
    |||||||| ||| || ||||||||||||||||||||| | ||||  |||||||||| || |||||| ||||||||||| | | ||||||| | ||||| |    
T  21505755 atataacacgtgacacctcacttagggtgtcacgtcaacgtagactgagtcaaaat-ggccttgggagccaaaactgccatatatgcaaagcataggggg 21505853  T
Q  120 caattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctatta 192  Q
    || ||||||||        ||||||||| |||||||||||||| |  |||||||||||||||||||||||||||    
T  21505854 cagttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 36580399 - 36580274
Alignment:
Q  72 aaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||||||  |  ||||||||       ||||||||  ||||||| |||||||||||||||    
T  36580399 aaaattggccttggtggccaaaactgctacagttgcaaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcacaacttcgtgaaagt 36580300  T
Q  171 taggggactaaaactgctattaagcc 196  Q
    |||||| | |||||||||||||||||    
T  36580299 taggggccgaaaactgctattaagcc 36580274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 4049882 - 4049787
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaa-acttaggga 118  Q
    |||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| |||| ||| ||||||||| ||||||||||| |||||||||    
T  4049882 aacacgtggcacctcacttagggtgccacgtcagcgtagatcgagtcaaaattggccttgagggtcaaaactgccacagatgcaaagacttaggga 4049787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 23826278 - 23826341
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaatt 201  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23826278 cttaaggggccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaagcctaatt 23826341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 44312869 - 44312745
Alignment:
Q  72 aaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagtt 171  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||| |||  ||||||||        ||  |||||||||||||||||||||| ||||||    
T  44312869 aaaattggtcttggggtcaaaactgttacagttgcaaaacttaggaagctgttttgtagcatttttttttaggggtcaaaatcgcaacttcgtaaaagtt 44312770  T
Q  172 aggggactaaaactgctattaagcc 196  Q
    ||| ||| ||||||| |||||||||    
T  44312769 aggagacgaaaactgttattaagcc 44312745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 18186597 - 18186763
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||||| | ||||  ||||||||||||| ||||||| |||||||||| |||||||||||||||| ||  |  |||| |    
T  18186597 gtggcacctcacttagggtgccacgtcaacgtagactgagtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacggttttat 18186696  T
Q  129 ag--nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    ||         |||||||||||||||||| ||||| |  ||||||||||| ||||||||||||||||    
T  18186697 agtttttttttcttagggggtcaaaatcgtaactttggaaaagttagggggctaaaactgctattaa 18186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 197
Target Start/End: Complemental strand, 15348124 - 15347953
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    |||||||||| | ||||||||||||| ||| ||||| |||| |||||||||||||  ||| ||||||| |||| | ||||||||||||||||||| |       
T  15348124 taacatgtggaacctcacttagggtgccacatcagcgtagaccgagtcaaaattgaccttgggggccataacttccacagatgcaaaacttaggg-gtgg 15348026  T
Q  123 ttttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||       |||| |||||||||||||||||||   |||||||||||| ||||||| ||||||||||||    
T  15348025 ttttgtag-ttttttctta-ggggtcaaaatcgcaactttaggaaagttagggggctaaaacggctattaagcct 15347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 17876317 - 17876237
Alignment:
Q  50 tcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||| || |||||||||||| |||||| ||| |||||||    
T  17876317 tcacgtcagcatagatcgagtcaaaattggccttggaggccaaaaccgccacagatgcaaaatttagggggcagttttgta 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 20185118 - 20185226
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||||  ||  ||||||||        |||||||||||||||||||||||||||||||||||||| | ||||    
T  20185118 ggggccaaaactgctacagttgcaaaacttaggaggcggttttgtagttttttt-ttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaa 20185216  T
Q  184 ctgctattaa 193  Q
    || |||||||    
T  20185217 ctactattaa 20185226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 28785894 - 28786002
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||||||||||||| |||| |||||||||||| | ||| |||| ||||||||| | | |||||||||||| || |||    
T  28785894 ataacacgtggcacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattagccttgggggtcaaaactgccataaatgcaaaacttatggggca 28785993  T
Q  122 attttgtag 130  Q
     ||||||||    
T  28785994 gttttgtag 28786002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 199
Target Start/End: Complemental strand, 35250293 - 35250116
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||||||| |||| ||||||||  |||| |||||||||||||| ||||||| |||||||||  | ||||||||||||||| | ||     
T  35250293 ataacacgtggcacctcacttaaggtgccacgtcagtgtagaccgagtcaaaattggccttggggtccaaaactgtcaaagatgcaaaacttagagggcg 35250194  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
     |||| |||       |||| |||  |||||||||||||| |  |||||||| || |||||||| |||||||||||||    
T  35250193 gttttatagtttttttcttaagggaccaaaatcgcaactttggaaaagttagagggctaaaactactattaagcctaa 35250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 15029235 - 15029058
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||||||| ||||||| |||||||||||||||| || |||||||||||||  ||| |||||||||||||| |||  |||||||||||||| ||     
T  15029235 ataacacgtggcatttcacttaaggtgtcacgtcagcatgga-cgagtcaaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggggcg 15029137  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggg---gactaaaactgctattaagcc 196  Q
     ||||||||         ||||||||||||||||||||||| |  ||||||||||   |  ||||||||||||||||||    
T  15029136 gttttgtagttttttttattagggggtcaaaatcgcaactttggaaaagttaggggttggttaaaactgctattaagcc 15029058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 18504418 - 18504310
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||| | ||||||||||||| ||||||||| ||||  ||||||||||||| ||| | |||||||||||| ||| ||||||||||||||| ||     
T  18504418 ataacacgtggaacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttagaggccaaaactgccacatatgcaaaacttagggggcg 18504319  T
Q  122 attttgtag 130  Q
     ||||||||    
T  18504318 gttttgtag 18504310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 45697545 - 45697485
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  45697545 cttagggggccaaaatcgcaacttcgagaaagttaggggacgaaaactgttattaagccta 45697485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 35250307 - 35250427
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||| ||| ||||| ||        ||||||||||||||||||||||| || ||||    
T  35250307 aaaattggtcttggggggccaaaactgctacagttgcaaaacttagggggcagttttgcagtttttt--ttagggggtcaaaatcgcaactttgtcaaag 35250404  T
Q  170 ttaggggactaaaactgctattaa 193  Q
    ||||||| | ||||| ||||||||    
T  35250405 ttagggg-caaaaaccgctattaa 35250427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 18504496 - 18504554
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  18504496 ttaggggatcaaaatcgcaacttcatgaaagttaggggacgaaaactgttattaagcct 18504554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 23826175 - 23826086
Alignment:
Q  42 ttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||||| ||||||||||| |||| ||| ||||||||| |||||||| |||||||||| ||| |||||||| ||| ||||| |||||||||    
T  23826175 ttagggcgtcacgtcagcgtagaccgaatcaaaattgatcttgggggccaaaactgccacaaatgcaaaatttaaggagcgattttgtag 23826086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 5172711 - 5172818
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn--cttagggggtcaaaatcgcaacttcgtgaa 167  Q
    |||||||| |||||||  ||||||||||||||| |||||||||||||| ||  ||||||||         ||||||||||||||||||||||||||| ||    
T  5172711 aaaattggccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagttttttttccttagggggtcaaaatcgcaacttcgtaaa 5172810  T
Q  168 agttaggg 175  Q
    ||||||||    
T  5172811 agttaggg 5172818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 14247406 - 14247293
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    |||||||||||||| |||  ||||||||||| || ||  ||||||||       |||||| || ||||||| ||||||||||||||||||| | | ||||    
T  14247406 ggggccaaaactgccacaattgcaaaacttatggggcggttttgtagtttttttcttaggcggccaaaatcacaacttcgtgaaagttaggtggcgaaaa 14247307  T
Q  184 ctgctattaagcct 197  Q
    ||||||||||||||    
T  14247306 ctgctattaagcct 14247293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 15348145 - 15348273
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn--cttagggggtcaaaatcgcaacttcgtgaaa 168  Q
    |||||||| ||||||| ||||||||||||| | |||||||||||||| ||  ||||||||         ||||| || ||||||||||||||||||||||    
T  15348145 aaaattggccttgggggccaaaactgctacggttgcaaaacttagggggcggttttgtagtttttttttcttagaggatcaaaatcgcaacttcgtgaaa 15348244  T
Q  169 gttaggggactaaaactgctattaagcct 197  Q
    ||||||||   || |||||||||||||||    
T  15348245 gttagggggtgaatactgctattaagcct 15348273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 19645006 - 19645118
Alignment:
Q  86 ggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaact 185  Q
    ||||||||||||||||| |||||||||||| | ||||||| |||        ||||||||  ||||||||||||||||||||||||| ||| | |||| |    
T  19645006 ggccaaaactgctacagttgcaaaacttagagggcaatttggtaatttttttcttaggggc-caaaatcgcaacttcgtgaaagttaaggggcgaaaatt 19645104  T
Q  186 gctattaagcctaa 199  Q
    |||||||| |||||    
T  19645105 gctattaaacctaa 19645118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 21939331 - 21939391
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||| ||||||||||||||||||| | ||||||| | ||||||||||||||||||||    
T  21939331 ttagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagcctaa 21939391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 201
Target Start/End: Complemental strand, 5172678 - 5172506
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    ||||| |||||||||||||  | |||| | |||| ||||||| ||||||| ||||| || |||||||| ||||||||||||||||| | |||||||| ||    
T  5172678 tggcacctcacttagggtgcaatgtcaacgtagaccgagtcataattggttttgggagctaaaactgccacagatgcaaaacttagagggcaattttata 5172579  T
Q  130 g-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaatt 201  Q
    |        |||||| || ||||||| ||||||    |||||||| |||||||||||| ||||||| ||||||    
T  5172578 gttttttttcttaggaggccaaaatcacaactttaaaaaagttagaggactaaaactgttattaagtctaatt 5172506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 19644972 - 19644885
Alignment:
Q  28 atgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaactta 114  Q
    |||||||| |||||||| |||| ||||||||| ||||  | || |||||||||||||| ||||||||||||||||| || ||||||||    
T  19644972 atgtggcacctcacttacggtgccacgtcagcgtagactgggttaaaattggtcttggaggccaaaactgctacagttgtaaaactta 19644885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 20505156 - 20505093
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaatt 201  Q
    ||||||||| |||| ||||||||| | |||||||||||| |||||||||||||||| |||||||    
T  20505156 cttagggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaaacctaatt 20505093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 36580415 - 36580522
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattg-gtcttggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    ||||| ||| || |||| |||||||| ||||||||| |||| |||||||||||||  | | |||||||||||||| ||| ||||||||||||||| ||      
T  36580415 taacacgtgacacctcatttagggtgccacgtcagcgtagaccgagtcaaaattgactttgggggccaaaactgccacaaatgcaaaacttagggggcgg 36580514  T
Q  123 ttttgtag 130  Q
    ||||||||    
T  36580515 ttttgtag 36580522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 8074047 - 8073957
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaactta 114  Q
    |||| |||||| ||||||||| ||| |||||||||  ||| ||| |||||||||| ||||||| |||||||||| ||| ||||||||||||    
T  8074047 aacacgtggcacctcacttagagtgccacgtcagcgaagaccgaatcaaaattggccttgggggccaaaactgccacatatgcaaaactta 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 11373900 - 11373846
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||| ||||||||||||| ||||||||||| | ||||||||||||||||||    
T  11373900 ggggtcaagatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 11373846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 21748082 - 21748128
Alignment:
Q  150 aaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  21748082 aaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcc 21748128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 3382013 - 3381929
Alignment:
Q  46 ggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||||||| ||||| || | ||||||||||||   ||||||||||||||||| ||| ||||||||||||||| ||  ||||||||    
T  3382013 ggtgtcacatcagcgtacaccgagtcaaaattaaccttggggccaaaactgccacatatgcaaaacttagggggcggttttgtag 3381929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 17876359 - 17876472
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| |||||||||||  |  |  |||||||        |||| |||| |||||||| ||||||||||||||||||||   ||||    
T  17876359 ggggccaaaactgctacagttgcaaaacttaatggacggttttgtaatttttttcttaaggggccaaaatcgtaacttcgtgaaagttagggggtgaaaa 17876458  T
Q  184 ctgctattaagcct 197  Q
    ||||||||||||||    
T  17876459 ctgctattaagcct 17876472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 29834290 - 29834354
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg 87  Q
    ||||||||||||| ||||||||||||||||||||||| | || |||||| ||||||  |||||||    
T  29834290 ataacatgtggcacctcacttagggtgtcacgtcagcgtggaccgagtctaaattgaccttgggg 29834354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 9500158 - 9500213
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    ||||||||  ||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  9500158 cttaggggaccaaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 46266509 - 46266568
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||| |||||| |||||||| ||||| ||||||  ||||||||||||||||||||    
T  46266509 cttaggggggcaaaattgcaacttcttgaaacttagggagctaaaactgctattaagcct 46266568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 6726315 - 6726258
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||| |||||||||||||||||||||||||| |||||| | ||||||| |||||||||    
T  6726315 cttagagggtcaaaatcgcaacttcgtgaaaggtagggg-cgaaaactgttattaagcc 6726258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 14247462 - 14247617
Alignment:
Q  41 cttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnnct 139  Q
    ||||||||| ||| ||||| |||||||||| ||||||||  ||||  ||||||||||| |||  |||||||||||| |  |  ||||||||        |    
T  14247462 cttagggtgccacatcagcgtagatcgagttaaaattggctttggatgccaaaactgccacatgtgcaaaacttagcggacggttttgtagttttt---t 14247558  T
Q  140 tagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    || |||||| |||||||||||| |  |||||||||||| |||||||||||||||||||||    
T  14247559 taaggggtcgaaatcgcaactttggaaaagttagggga-taaaactgctattaagcctaa 14247617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 17931878 - 17932042
Alignment:
Q  32 ggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggt-cttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||| ||||||||||||| ||||||||| ||||   ||||||||||| |  ||||| |||||||||  |||||||||||| |||| | || ||||||||     
T  17931878 ggcacctcacttagggtgccacgtcagcgtagacaaagtcaaaattgatatttgggaccaaaactgacacagatgcaaaatttagagggcgattttgta- 17931976  T
Q  131 nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
            |||| ||| |||||||||||||| |  ||||| ||| | |||||||||||||||||||||    
T  17931977 --ttttttttagagggccaaaatcgcaactttggaaaagtgaggaggctaaaactgctattaagccta 17932042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 24433016 - 24432978
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttagggg 176  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  24433016 cttagggggccaaaatcgcaacttcgtgaaagttagggg 24432978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 6792052 - 6792113
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||  |||||||||||||| |  ||||||||||| |||||||||||||||| |||||    
T  6792052 cttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaacctaa 6792113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 8074142 - 8074187
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||    
T  8074142 aaaatcgtaacttcgtgaaagttagggggcgaaaactgctattaag 8074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 28785812 - 28785755
Alignment:
Q  140 tagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||| |||||||| |||||||||||||||||||| |  |||||||||||| ||||    
T  28785812 tagggggccaaaatcgtaacttcgtgaaagttagggggcggaaactgctattatgcct 28785755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 41243845 - 41243958
Alignment:
Q  85 gggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn--cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||||||||| |||||| |||||||||||| | || |||||||||         ||||||| | |||||||| ||||| |||||||||||||  | |||    
T  41243845 gggccaaaactactacagttgcaaaacttagtgggcgattttgtagtttttttttcttagggtgccaaaatcgtaactttgtgaaagttagggaccgaaa 41243944  T
Q  183 actgctattaagcc 196  Q
    ||||||||||||||    
T  41243945 actgctattaagcc 41243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 48058990 - 48058864
Alignment:
Q  68 agtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtga 166  Q
    |||||||||||  || |||||||||||||| ||||| |||||||||||||  | |||||||||        |||| |||| ||||||| ||||||  |||    
T  48058990 agtcaaaattgacctaggggccaaaactgccacagaggcaaaacttaggggacgattttgtagttttttttcttaaggggccaaaatctcaacttgttga 48058891  T
Q  167 aagttaggggactaaaactgctattaa 193  Q
    || |||||||  |||||||||||||||    
T  48058890 aacttagggggttaaaactgctattaa 48058864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 327435 - 327495
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||| ||||||||||||||| |||||  |||||| | | ||||||||||||||||||    
T  327435 ttagggggccaaaatcgcaacttcttgaaacatagggggccacaactgctattaagcctaa 327495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 3247432 - 3247484
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||| ||||||| ||||||||||||||||||||||| |||| || ||||||||    
T  3247432 ggggccaaaatcacaacttcgtgaaagttaggggacgaaaattgttattaagc 3247484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 11374130 - 11374214
Alignment:
Q  46 ggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||| ||||||||| |||| || ||||||||||| ||||| |||||||||   ||| ||||||||||||||| | | ||||||||    
T  11374130 ggtgccacgtcagcgtagaccgggtcaaaattggccttggcgccaaaactagcacaaatgcaaaacttagggggtagttttgtag 11374214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 23746161 - 23746205
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||    
T  23746161 aaaatcgcaacttcgtaaaagttaggggacgaaagctgctattaa 23746205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 282858 - 282917
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |||||||| ||||||||||||||| |||||  |||| | | |||||||||||||||||||    
T  282858 ttagggggccaaaatcgcaacttcttgaaacataggaggccaaaactgctattaagccta 282917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 15029308 - 15029356
Alignment:
Q  144 gggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    ||||||||||| ||||||||| |||||||||||||  ||||||||||||||    
T  15029308 gggtcaaaatcacaacttcgtaaaagttaggggac--aaactgctattaag 15029356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 21505661 - 21505614
Alignment:
Q  150 aaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||| |||||||||||||||||| ||||| ||| ||||||||||||||    
T  21505661 aaattgcaacttcgtgaaagttaagggacgaaagctgctattaagcct 21505614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 36903459 - 36903518
Alignment:
Q  72 aaaattggtcttggggcc-aaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||| ||| ||||||||    
T  36903459 aaaattggccttgggggctaaaactgctacagttgcaaaacttagggtgcagttttgtag 36903518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 45231665 - 45231708
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||    
T  45231665 gtggcacctcacttagggtgccacgtcagcattgatcgagtcaa 45231708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 45718137 - 45718188
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||| |||||||||||||||||||||| | | |||| |||||||||||||||    
T  45718137 caaattcgcaacttcgtgaaagttaggaggcaaaaattgctattaagcctaa 45718188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 23746065 - 23745976
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaactt 113  Q
    |||||||||| || |||||||| |||  ||||||||| |||| ||||||||| | || ||||||||||| ||||  ||| |||||||||||    
T  23746065 ataacatgtgacacctcacttacggtaccacgtcagcgtagaccgagtcaaagt-ggccttggggccaacactgtcacaaatgcaaaactt 23745976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 45718046 - 45717980
Alignment:
Q  50 tcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttag 115  Q
    |||||||| | |||| ||||||||||||| |||| |||| ||||||||  |||||||||||||||||    
T  45718046 tcacgtcaacgtagaccgagtcaaaattgatcttaggggtcaaaactgacacagatgcaaaacttag 45717980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 20184974 - 20184913
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||  ||||||||||||| |  ||||||||||  ||||||||| ||||||||||||    
T  20184974 cttagggggctaaaatcgcaactttggaaaagttagggagctaaaactgttattaagcctaa 20184913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 20505266 - 20505323
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||||| ||||||||||||||| | |||| ||||||   |||||||||||||||||    
T  20505266 ttagggggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaagcc 20505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 25987063 - 25987136
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||| |||||| ||||||||||||| ||||||||| | || |||||||| | ||| ||||||| ||||||||||    
T  25987063 aacacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggacttggggtccaaaactgc 25987136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 117
Target Start/End: Original strand, 28472580 - 28472613
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||||||||||| ||||||||||||||    
T  28472580 ggggccaaaactgctacagttgcaaaacttaggg 28472613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 3318375 - 3318315
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||  |||||||||||||| |  ||||||| ||| |||||||| |||||||||||||    
T  3318375 ttaggggaccaaaatcgcaactttggaaaagttaaggggctaaaactcctattaagcctaa 3318315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 10312376 - 10312440
Alignment:
Q  34 catctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  10312376 catctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 10312440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 16879413 - 16879361
Alignment:
Q  21 atataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||| ||| |||||| ||||||||||||||||||||||| | |||| ||||||    
T  16879413 atatgacacgtggcacctcacttagggtgtcacgtcagcgttgatcaagtcaa 16879361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 25780070 - 25780130
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||  ||||||||||| ||||| ||||||||  ||| || |||||||||||||||||    
T  25780070 ttaggggtccaaaatcgcaatttcgtaaaagttagaagaccaacactgctattaagcctaa 25780130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 35437378 - 35437306
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  35437378 acatgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 35437306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 38053318 - 38053246
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  38053318 acatgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 38053246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 48059212 - 48059260
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||| ||||||| | ||| ||||||| |||||||||||||||||||    
T  48059212 caaaatcacaacttcttaaaacttaggggcctaaaactgctattaagcc 48059260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 12719584 - 12719761
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||| ||||| ||| ||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||| |      
T  12719584 ataacatgtggcacctcacttggggtgccacatcagcgtagaccgagtcaaaattggtcttggaggccaaaactgccacagatgcaaaacttagggggtg 12719683  T
Q  122 attttgtag--nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     ||||||||         ||||||||| ||||||  |||||| | ||||||||||||  |||||||||||||||||||    
T  12719684 gttttgtagtttttttttcttagggggccaaaatatcaactttgggaaagttagggggttaaaactgctattaagcct 12719761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 44356537 - 44356712
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||| || ||||||||||||| ||||| | | |||| | |||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||     
T  44356537 ataacacgtgacacctcacttagggtgccacgttatcgtagaccaagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcg 44356636  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
     |||||||        |||||| || |||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  44356637 gttttgtaatttttttcttaggcggccaaaatcgcaactttgagaaagttagggg-ctaaaactgctattaagccta 44356712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 23759715 - 23759888
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgg-ggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||  |||||| ||||||||||||  |  |    
T  23759715 aacacgtggcacctcacttagggtgccacgtcagcttagatcgagtcaaaattggccttggaggccaaaactgtcacagatacaaaacttaggggacggt 23759814  T
Q  124 tttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||       ||||||||  ||||||||||||||  ||||||||| |||  ||||| || ||||||||||    
T  23759815 tttgtagtttttttcttaggggaccaaaatcgcaactttatgaaagttaaggggttaaaattgttattaagcct 23759888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 206
Target Start/End: Complemental strand, 2016952 - 2016781
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnn 134  Q
    ||||||||||||| ||||||||| |||| |||||||||||||| ||| |||||||||||||| |||  |||||||||||||| ||| ||||||||         
T  2016952 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagtcttt 2016853  T
Q  135 nnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaa 206  Q
       ||| | ||| |||||||||||||| |  ||||||||||| ||||||||||||| |||||| ||| ||||    
T  2016852 tttctttgagggccaaaatcgcaactttggaaaagttagggggctaaaactgctatcaagccttatttttaa 2016781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 2654108 - 2654283
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||  || |||||||||| ||||||||| |||| | |||||||||||| ||| |||| ||||||||| ||| ||||||||||||||| |||    
T  2654108 ataacatgtggctcctgacttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggtcaaaactgccacatatgcaaaacttagggggca 2654207  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     ||||||||        |||||||  ||||||  |||||| | |||||||||||| |||||||| |||||||||||    
T  2654208 gttttgtagtattttttttaggggaccaaaataacaactttgggaaagttaggggcctaaaactactattaagcct 2654283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 14449423 - 14449599
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||||||| |||| ||||||||| || | |||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||     
T  14449423 ataacacgtggcacctcacttatggtgccacgtcagcgtaaaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcg 14449522  T
Q  122 attttgtag--nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
     ||||||||         |||| | || |||||||||||||| |  ||||||||||| |||||||| ||||||||||    
T  14449523 gttttgtagttttttttccttaagaggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 43074727 - 43074822
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| ||||||||||||| ||||||||| ||||  ||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  43074727 ataacacgtggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttaggg 43074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 1420684 - 1420861
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    ||||| |||||| ||||||||||||| ||||||||| | || |||||||||||||| ||| |||| || |||||| ||| |||||||||||| || ||      
T  1420684 taacacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaattggccttgggggtcataactgccacaaatgcaaaacttatggggcgg 1420783  T
Q  123 ttttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||        ||||||||  |||||||| ||||| | |||||||| ||| ||||||||||||||||||||||    
T  1420784 ttttgtagttctttttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaagcctaa 1420861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 10059850 - 10060013
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagcaattttgtag---nn 132  Q
    ||||||||||||| ||||||| | |||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||||| ||  ||||||||         
T  10059850 ctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttt 10059949  T
Q  133 nnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
         |||| ||||  ||||||||||||| |  ||| ||||||| |||||||||||||||||||    
T  10059950 tttttcttaaggggcaaaaatcgcaactttgaaaaaattaggggtctaaaactgctattaagcc 10060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 197
Target Start/End: Complemental strand, 21451625 - 21451458
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||||| ||||||||||||||||||||||  |||| |||||||||||| | |||| |||||||||||| |||  ||||||| |||||   |  |||||||    
T  21451625 gtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaaattcgccttgtggccaaaactgccacaagtgcaaaatttaggagacgtttttgta 21451526  T
Q  130 gnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |       || |||| |  ||||||||||||| | |||||||||| | ||||||||||||||||||||    
T  21451525 gtttttatctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcct 21451458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 27978866 - 27978695
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||||||  |||| | ||||| ||||||||| |||| |||||||||||||| ||| |||| ||||||||| ||| ||||||||||||    |||    
T  27978866 ataacacgtggcacttcacgtggggtgccacgtcagcgtagaccgagtcaaaattggccttgggggtcaaaactgccacaaatgcaaaacttatatggca 27978767  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
     |||||||        |||||||||||||||||||||||| | ||||||||| || || |||||||||||||    
T  27978766 gttttgtaatttttttcttagggggtcaaaatcgcaactttgagaaagttagagggcttaaactgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 20112289 - 20112463
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg-tcttggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||| ||| ||||||||| | || |||||||||||||| | | |||||||||||||| ||| ||||||||||| ||| ||     
T  20112289 ataacacgtggcacctcacttagagtgccacgtcagcgttgaccgagtcaaaattggctttgggggccaaaactgccacatatgcaaaactttgggggcg 20112388  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
     ||||||||       ||| ||||| |||||||||||||| |  ||||||||  | ||||||||| |||||||||    
T  20112389 gttttgtagtatttttctttgggggccaaaatcgcaactttggaaaagttagaaggctaaaactgttattaagcc 20112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 53312460 - 53312283
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| ||||||||||||| ||||||||| ||||  ||||| ||||||| ||||||| |||||||||| |||  ||||||| |||||| |   |    
T  53312460 aacacgtggcacctcacttagggtgccacgtcagcgtagactgagtccaaattggccttgggggccaaaactgccacatgtgcaaaatttagggggtggt 53312361  T
Q  124 tttgtagnnnnnnn--cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||         ||||||||| |||||||||||||| |  ||||||||||| |||||| |||||||||||||||    
T  53312360 tttgtagtttgtttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaagcctaa 53312283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 199
Target Start/End: Complemental strand, 54855478 - 54855301
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| ||||||||||||||  |||||| |||||||| | | |||||||||||||| || |||    
T  54855478 ataacaagtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggctttggggaccaaaactacca-agatgcaaaacttaaggggca 54855380  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
     |||||| |        |||| | ||||||||||||| ||| | |||||||||| |  |||||||||||||||||||||    
T  54855379 gttttgtcgttttttttcttatgaggtcaaaatcgcagctttgagaaagttaggtggttaaaactgctattaagcctaa 54855301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 202
Target Start/End: Complemental strand, 2837074 - 2836893
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||| ||||||||  ||||  ||||||||||||| ||| ||||||||||||   ||| ||||||||||||||| ||     
T  2837074 ataacacgtggcacctcacttagggtgccacgtcagtgtagactgagtcaaaattggccttgggggccaaaactctcacacatgcaaaacttagggggcg 2836975  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaatta 202  Q
     ||||||||        ||| ||||| |||||||||| ||| |  |||||||||||  |||||||| |||||||||||||||    
T  2836974 gttttgtagttttttttctttgggggccaaaatcgcagctttggaaaagttagggggttaaaactgttattaagcctaatta 2836893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 4796179 - 4796271
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    |||||| |||||| ||||||||||||| ||||||||| |||| ||||||||||||| | || |||||||||||||| |||| |||||||||||    
T  4796179 ataacaagtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgattttgggggccaaaactgccacaggtgcaaaactta 4796271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 200
Target Start/End: Complemental strand, 53924872 - 53924743
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||  |  |||||||        |||| |||||||||||| |||||||||||||||    
T  53924872 aaaattgatcttgggggccaaaactgctacagttgcaaaacttaggggacggttttgtaatttttttcttaaggggtcaaaatcacaacttcgtgaaagt 53924773  T
Q  171 taggggactaaaactgctattaagcctaat 200  Q
    |||||| | | |||| ||||||||||||||    
T  53924772 tagggggcgagaactactattaagcctaat 53924743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 25909662 - 25909486
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||||||||| ||||| |||| ||||||||| |||| |||||||||||||| ||| |||||||||||  | |||  |||||||||||||| ||     
T  25909662 ataacacgtggcatcttacttaaggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaacctccacaagtgcaaaacttagggggcg 25909563  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
     |||| |||        ||||||||| ||||||| |||||| |  |||||||||||  |||||||||||||||||||    
T  25909562 gttttatagttttttttcttagggggccaaaatcacaactttggaaaagttagggggttaaaactgctattaagcct 25909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 193
Target Start/End: Complemental strand, 51362700 - 51362539
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag----n 131  Q
    ||||||||||||| ||||||||  ||||  ||||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||  ||||||||         
T  51362700 ctcacttagggtgccacgtcagtgtagactgagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagttttt 51362601  T
Q  132 nnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
          ||||||||| ||||||||||||||    ||||||||||| |||||||| |||||||    
T  51362600 tttcttcttagggggccaaaatcgcaactttagaaaagttagggggctaaaactactattaa 51362539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 11824354 - 11824268
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||| ||||||||||||| ||| ||||| ||||  ||||||||||||| |||||| |||||||||| ||| |||||||||||||||    
T  11824354 tggcacctcacttagggtgccacatcagcgtagactgagtcaaaattggccttgggaccaaaactgccacacatgcaaaacttaggg 11824268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 29697696 - 29697602
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| ||| || ||||||||||||| ||||||||| ||||  | ||||||||||| |||||  |||||||||| |||||||||||||||||||    
T  29697696 ataacacgtgacacctcacttagggtgccacgtcagcgtagactgggtcaaaattggccttggaaccaaaactgccacagatgcaaaacttaggg 29697602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 50769538 - 50769366
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||||| ||||||  |||||||| |||  |||||||||||||  ||| ||||| |||||||| | ||||||||||||||||| ||     
T  50769538 ataacacgtggcacctcactcagggtgctacgtcagcgtaggccgagtcaaaattgaccttaggggctaaaactgccatagatgcaaaacttaggg-gcg 50769440  T
Q  122 attttgtagnnnnnnn--cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
     ||||||||         ||||||||| |||||||||||||| | ||||||||||||  |||||||||||||||    
T  50769439 gttttgtagtttttttttcttaggggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 6614981 - 6615056
Alignment:
Q  21 atataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgc 97  Q
    ||||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||||  ||||| |||||||||    
T  6614981 atataacatgtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattggt-atggggtcaaaactgc 6615056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 6637202 - 6637310
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagca 121  Q
    ||||||||||||| ||||||||||||| || |||||  |||| ||||||||||||||  ||| ||||||||||||| | | |||||||||||| || ||     
T  6637202 ataacatgtggcacctcacttagggtgccatgtcagtgtagaccgagtcaaaattggcattgtgggccaaaactgccagaaatgcaaaacttaaggggcg 6637301  T
Q  122 attttgtag 130  Q
    |||||||||    
T  6637302 attttgtag 6637310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 35383874 - 35383764
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    |||||||||| ||||||||  ||||||||||||| || |||||||||        |||||||| ||||||| ||||||||||||||||||||| | ||||    
T  35383874 ggggccaaaagtgctacagtggcaaaacttaggg-gcgattttgtagtttttt--ttagggggccaaaatcacaacttcgtgaaagttagggggcgaaaa 35383778  T
Q  184 ctgctattaagcct 197  Q
    ||||||||||||||    
T  35383777 ctgctattaagcct 35383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 21597541 - 21597636
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| |||||| |||| |||||||| ||||||||| |||| |||||||||||| || || |||||||||||||| ||| |||||||| ||||||    
T  21597541 ataacacgtggcacctcatttagggtgccacgtcagcgtagaccgagtcaaaattagttttgggggccaaaactgccacatatgcaaaatttaggg 21597636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 21871542 - 21871696
Alignment:
Q  39 cacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn 137  Q
    ||||||| |||||| |||||| |||| ||||| ||||||| | |||||| |||||||| | | ||||||||||||||||  ||  ||||||||           
T  21871542 cacttagagtgtcatgtcagcgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt- 21871640  T
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
     ||||||||||||||||||||||| |  ||||||||||| |||||| ||||||||||    
T  21871641 -ttagggggtcaaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 21927403 - 21927557
Alignment:
Q  39 cacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn 137  Q
    ||||||| |||||| |||||| |||| ||||| ||||||| | |||||| |||||||| | | ||||||||||||||||  ||  ||||||||           
T  21927403 cacttagagtgtcatgtcagcgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt- 21927501  T
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
     ||||||||||||||||||||||| |  ||||||||||| |||||| ||||||||||    
T  21927502 -ttagggggtcaaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 20118056 - 20118133
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactt 113  Q
    ||||||||||||| |||||| || |||||||| |||||||||||||| |||||||||||||  ||| |||||||||||    
T  20118056 ctcacttagggtgccacgtccgcgtagatcgaatcaaaattggtcttgggggccaaaactggcacatatgcaaaactt 20118133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 35393475 - 35393402
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaact 95  Q
    ||||||||||||| ||||||||||||| ||| |||||||||| | |||||||||||| ||| ||||||||||||    
T  35393475 ataacatgtggcacctcacttagggtgccacatcagcatagaacaagtcaaaattgggcttgggggccaaaact 35393402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 198
Target Start/End: Complemental strand, 6614970 - 6614845
Alignment:
Q  72 aaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagtt 171  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||     ||||||||       |||| || | ||||||||||||||||||||||||    
T  6614970 aaaattgaccttggggccaaaactgctacagttgcaaaacttaggggatggttttgtagtttttt-cttaaggagccaaaatcgcaacttcgtgaaagtt 6614872  T
Q  172 aggggactaaaactgctattaagccta 198  Q
    | ||| | |||| ||||||||||||||    
T  6614871 aagggtcgaaaaatgctattaagccta 6614845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 50769551 - 50769675
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||   ||  |||| |||        |||||||| ||||||||||||||||| |||||    
T  50769551 aaaattggtcttgggggccaaaactgctacagttgcaaaacttagtaggcggttttatagttttttt-ttagggggccaaaatcgcaacttcgtaaaagt 50769649  T
Q  171 taggggactaaaactgctattaagcc 196  Q
    |||||| | ||||||||| |||||||    
T  50769650 tagggggcgaaaactgcttttaagcc 50769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 53312488 - 53312600
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    ||||||||||||||||||| | || | ||||| | ||| ||||||||       ||||| |||||||||||||||||||||||||||||||||   ||||    
T  53312488 ggggccaaaactgctacagttacagagcttagag-gcagttttgtagtttttttcttagtgggtcaaaatcgcaacttcgtgaaagttagggggtgaaaa 53312586  T
Q  184 ctgctattaagcct 197  Q
    ||| ||||||||||    
T  53312587 ctgttattaagcct 53312600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 53924890 - 53925075
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| ||| |||||||||||||||||||| ||| | |||| |||||||||||||  |||| ||| ||||||||  ||| ||||||||||||||| |      
T  53924890 ataacacgtgacatctcacttagggtgtcacatcaacgtagaccgagtcaaaattgaccttgagggtcaaaactgtcacaaatgcaaaacttagggggag 53924989  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaattattaat 207  Q
    ||||| |||       ||||||||  ||||||||||||||    ||||||||| | |||||| || |||||| || || |||||||    
T  53924990 attttatagtttttttcttaggggaccaaaatcgcaactttagaaaagttaggaggctaaaattgttattaaaccaaaatattaat 53925075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 3658112 - 3658235
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaag 169  Q
    |||||||| |||||||  ||||||||||||||| |||||||||||| |  || |||| |||       |||| ||| |||||||||||||||| | ||||    
T  3658112 aaaattggccttggggagccaaaactgctacagttgcaaaacttagaggacagttttttagtttttttcttaagggatcaaaatcgcaacttcataaaag 3658211  T
Q  170 ttaggggactaaaactgctattaa 193  Q
    |||| |||| ||||||||||||||    
T  3658212 ttagaggacgaaaactgctattaa 3658235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 14449331 - 14449276
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    ||||||||| ||||||| ||||||||||||||||||||| | ||||||||||||||    
T  14449331 cttagggggccaaaatctcaacttcgtgaaagttagggggcgaaaactgctattaa 14449276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 18937379 - 18937442
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg 86  Q
    |||||| |||| | ||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  18937379 ataacacgtggtacctcacttagggtggcacgtcagcatagaccgagtaaaaattggtcttggg 18937442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 31553382 - 31553489
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaa 122  Q
    ||||| || ||| ||||||||||||| | ||| ||| |||| |||||||||||||| ||| |||||||||||||| | ||||| |||| |||||| || |    
T  31553382 taacacgtagcacctcacttagggtgccgcgttagcgtagaccgagtcaaaattggccttgggggccaaaactgccatagatgtaaaatttagggggcga 31553481  T
Q  123 ttttgtag 130  Q
    ||||||||    
T  31553482 ttttgtag 31553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 35393935 - 35393986
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  35393935 caaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcctaa 35393986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 43074674 - 43074615
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||| |||| ||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  43074674 cttatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaagcct 43074615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 49185744 - 49185669
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgc 97  Q
    ||||||||||||| ||| ||||||||| ||||||||| |||| | |||||||||||| ||| ||||||||||||||    
T  49185744 ataacatgtggcacctcgcttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgc 49185669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 14060867 - 14060760
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    |||||||||||||||| || |||||| ||||||| ||  ||||||||       |||||||||||||||||||||||| |  |||||||||||  |||||    
T  14060867 ggggccaaaactgctatagttgcaaagcttagggggcggttttgtagtttttt-cttagggggtcaaaatcgcaactttgaaaaagttagggggttaaaa 14060769  T
Q  184 ctgctatta 192  Q
    |||||||||    
T  14060768 ctgctatta 14060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 14060873 - 14061020
Alignment:
Q  54 gtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaa 151  Q
    ||||||||||| |||||||||||| | ||||||| |||||||||| ||||||| |||||||||||  || ||||||||        ||||||| | ||||    
T  14060873 gtcagcatagaccgagtcaaaattagccttgggggccaaaactgccacagatgtaaaacttaggggacagttttgtagttttttttcttagggagccaaa 14060972  T
Q  152 atcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||| |  ||| ||||||   |||| ||||||||||||||||    
T  14060973 atcgcaactttgaaaaaattagggagttaaagctgctattaagcctaa 14061020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 21957596 - 21957538
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||||||||||||||||| | |||||||||||  ||||||||| ||||||||||    
T  21957596 ttagggggtcaaaatcgcaactttgagaaagttagggagctaaaactgatattaagcct 21957538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 23759686 - 23759560
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagt 170  Q
    |||||||| ||||||| |||||||| |||||| ||||||| ||||||  |  ||||||||       |||| |||| ||||||||||||||  |||||||    
T  23759686 aaaattggccttgggggccaaaactactacagttgcaaaatttaggggacggttttgtagtttttttcttaaggggccaaaatcgcaactttatgaaagt 23759587  T
Q  171 taggggactaaaactgctattaagcct 197  Q
    |||||| | |||||| |||||||||||    
T  23759586 tagggggcgaaaactactattaagcct 23759560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 34567755 - 34567848
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttag 115  Q
    |||||| ||||||  |||||| ||||||||||||||||| || |||||| ||||||   || |||||||||||||| ||| |||||||||||||    
T  34567755 ataacacgtggcacttcactttgggtgtcacgtcagcattgaccgagtcgaaattgacattgggggccaaaactgccacatatgcaaaacttag 34567848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 43074827 - 43074880
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||||||||||||| | |||||||||||| |||||| ||||||||||||    
T  43074827 ggggtcaaaatcgcaactttgggaaagttagggggctaaaattgctattaagcc 43074880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 51371636 - 51371463
Alignment:
Q  25 aacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaat 123  Q
    |||| |||||| |||| |||||||| ||||||||  |||| |||||||||||||   || |||| ||||||||| | | |||||||||||| || |||||    
T  51371636 aacacgtggcacctcatttagggtgccacgtcagtgtagaccgagtcaaaattgacattgggggtcaaaactgccatatatgcaaaacttaaggggcaat 51371537  T
Q  124 tttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||        ||||  ||||||||||| |||||||  |||||||| |||  |||||||||||||||||||    
T  51371536 tttgtagttttttttctta-agggtcaaaatcacaacttcaagaaagttaaggggttaaaactgctattaagcct 51371463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 1420645 - 1420537
Alignment:
Q  86 ggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaact 185  Q
    ||||||||||| || || |||||||||||||| ||  ||||||||        ||||| || |||||||||||||| |  ||||||||||| ||||||||    
T  1420645 ggccaaaactgatatagttgcaaaacttagggggcggttttgtagttttttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaact 1420546  T
Q  186 gctattaag 194  Q
    |||||||||    
T  1420545 gctattaag 1420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 2654008 - 2653953
Alignment:
Q  141 agggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    |||||| ||||||||||||||||| ||||||||| | | |||||||||||||||||    
T  2654008 agggggccaaaatcgcaacttcgtaaaagttaggaggcaaaaactgctattaagcc 2653953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 26089644 - 26089553
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaactta 114  Q
    |||||| ||||||  |||||||||||| ||||||||| |||   ||||||||||||| ||| || |||||||||  ||||||| ||||||||    
T  26089644 ataacacgtggcacttcacttagggtgccacgtcagcgtagtctgagtcaaaattggcctttggaccaaaactgtcacagatgtaaaactta 26089553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 37831650 - 37831595
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    ||||||||| ||||||||||||||| | ||| ||||||| ||||||||||||||||    
T  37831650 cttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaa 37831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 37832953 - 37833012
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||| |||||||||||||||   |||||||||| | ||||||||||||||||||||    
T  37832953 cttaggggttcaaaatcgcaactttaggaaagttaggaggctaaaactgctattaagcct 37833012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 6637190 - 6637075
Alignment:
Q  72 aaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagtt 171  Q
    |||||||||||||||| |||||| ||||||| ||||||||||| ||  |  |||||||        ||||||||  |||||||||||| |||||||||||    
T  6637190 aaaattggtcttggggtcaaaaccgctacagttgcaaaacttaagggacggttttgtaatttttttcttaggggaccaaaatcgcaacatcgtgaaagtt 6637091  T
Q  172 aggggactaaaactgc 187  Q
    | ||| | ||||||||    
T  6637090 aaggggcaaaaactgc 6637075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 8965672 - 8965750
Alignment:
Q  40 acttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||||||| ||| ||| | |||| |||||||||||||   |||||| |||||||||| |||||||||||||||||||    
T  8965672 acttagggtgccacatcaacgtagaccgagtcaaaattgacattggggaccaaaactgccacagatgcaaaacttaggg 8965750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 16292469 - 16292584
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaa 183  Q
    |||||||||||| |||||| ||||||||||||||  | |||||||||        |  | |||| |||||||||||||||||||||||||||| | ||||    
T  16292469 ggggccaaaactactacagttgcaaaacttaggggacgattttgtagtttttttttctgagggtaaaaatcgcaacttcgtgaaagttagggggcgaaaa 16292568  T
Q  184 ctgctattaagcctaa 199  Q
     || |||||| |||||    
T  16292569 ttgttattaaacctaa 16292584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 19909226 - 19909172
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||| |||||||||||||| | ||||||||||||  |||||||||||||||||||    
T  19909226 ggggccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagcct 19909172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 49185628 - 49185571
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcc 196  Q
    ||||||||| |||||||||||||| | ||||||||||||  ||||||||||||||||||    
T  49185628 cttagggggccaaaatcgcaacttgg-gaaagttagggggttaaaactgctattaagcc 49185571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 51362796 - 51362857
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||| ||| |||||||| |||||| || ||||||||||||| |||||||||||||| |||||    
T  51362796 cttaagggatcaaaatcacaactttgtaaaagttaggggacgaaaactgctattaaacctaa 51362857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 51371729 - 51371778
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||||||||||| |||||||||||| | |||||| |||||||||||    
T  51371729 caaaatcgcaacttcgagaaagttagggggcgaaaactactattaagcct 51371778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 54983894 - 54983849
Alignment:
Q  150 aaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||    
T  54983894 aaatcgcatcttcgtaaaagttaggggacgaaaactgctattaagc 54983849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 4796094 - 4796034
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||| ||| ||||||||||| || |  |||||||||||||||||| ||||||||||||||    
T  4796094 cttagagggccaaaatcgcaattttgaaaaagttaggggactaaaaatgctattaagccta 4796034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 8070800 - 8070712
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaa 110  Q
    |||||| |||||| ||||||| ||||| ||||||||| |||| | ||| ||||||| ||| |||| |||||||||| |||||| |||||    
T  8070800 ataacacgtggcacctcacttggggtgccacgtcagcgtagaccaagttaaaattgatctagggggccaaaactgccacagatacaaaa 8070712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 14016778 - 14016722
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    |||||| || |||||||||||||| | |||||||||||| ||||||| |||||||||    
T  14016778 cttaggaggccaaaatcgcaactttgggaaagttagggggctaaaaccgctattaag 14016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 35615371 - 35615315
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||| ||||||||||||||    ||||||||||| ||||||||||||||||||    
T  35615371 ttagggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 41707886 - 41707818
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  41707886 gtggcatctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 41707818  T

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Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 51362727 - 51362771
Alignment:
Q  72 aaaattggtcttgggg-ccaaaactgctacagatgcaaaacttag 115  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  51362727 aaaattggtcttggggaccaaaactgctacagttgcaaaacttag 51362771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 52462927 - 52463019
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaactta 114  Q
    |||||| ||| || ||||||| ||||||||||||||  |||| || || ||||||||| || |||||||||||||  | ||||||||||||||    
T  52462927 ataacacgtgacacctcactttgggtgtcacgtcagtgtagaccgggttaaaattggttttgggggccaaaactgtcatagatgcaaaactta 52463019  T

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Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 54607055 - 54606955
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| || |||| |||||||||| | |||  |||||| ||||| || |||||||    
T  54607055 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgccaaagaatcaaaacatagggggctattttgt 54606956  T
Q  129 a 129  Q
    |    
T  54606955 a 54606955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 54983972 - 54984080
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||||| |||| ||||||||||||| ||||||||| |||| | || ||||||||   ||||| ||||||||||  |||  ||||||| |||||| ||     
T  54983972 ataacatggggcacctcacttagggtgccacgtcagcgtagaccaagccaaaattgacattgggtgccaaaactgacacatgtgcaaaatttagggggcg 54984071  T
Q  122 attttgtag 130  Q
    |||||||||    
T  54984072 attttgtag 54984080  T

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Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 2017054 - 2017105
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||||||||   |||||||| ||| ||||||||||||||||||||||    
T  2017054 caaaatcgcaactttaggaaagttatggggctaaaactgctattaagcctaa 2017105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 6207303 - 6207176
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaa 168  Q
    ||||||||||||||||  ||||||||||||||| || |||||||| || ||| ||||||||        |||||| |  ||||||| ||||||||  |||    
T  6207303 aaaattggtcttggggagccaaaactgctacagttgtaaaacttatggggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaaa 6207204  T
Q  169 gttaggggactaaaactgctattaagcc 196  Q
    |||||||  | |||||||||||||||||    
T  6207203 gttagggagcgaaaactgctattaagcc 6207176  T

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Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 6207318 - 6207421
Alignment:
Q  28 atgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaatttt 126  Q
    ||||| |||||||||||| ||| ||| | ||| |||| | |||||||||||  ||||||| |||||| ||| ||| ||||||||||||||| ||  ||||    
T  6207318 atgtgacatctcacttagagtgccacattagcgtagaccaagtcaaaattgaccttgggggccaaaattgccacaaatgcaaaacttagggggcggtttt 6207417  T
Q  127 gtag 130  Q
    ||||    
T  6207418 gtag 6207421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 21322857 - 21322944
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagg 116  Q
    ||||||||||| |||| ||||| ||| ||| |||| ||||||||||||||  || |||| ||||||||  ||| ||||||||||||||    
T  21322857 gtggcatctcatttagagtgtcgcgttagcgtagaccgagtcaaaattggcattgggggtcaaaactgtcacatatgcaaaacttagg 21322944  T

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Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 21957733 - 21957780
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||||||||| |  ||||||||||| ||||||||||||||||||    
T  21957733 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 35083722 - 35083769
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaa 73  Q
    |||||||||| ||||||||||||||||||||||| | || ||||||||    
T  35083722 acatgtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 35083769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 3369904 - 3369846
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||| ||||||||||||||| ||| | ||||||| | ||||||| ||||||||||    
T  3369904 ttagggggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagcct 3369846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 11824464 - 11824514
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||||||||||| ||||||||||| |  |||||| |||||||||||    
T  11824464 caaaatcgcaacttcgtaaaagttagggggcggaaactgttattaagccta 11824514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 35615434 - 35615479
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    |||||||||||||||||||||||||||||   |||||||||||||||    
T  35615434 caaaatcgcaacttcgtgaaagttagggg-tgaaaactgctattaag 35615479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 51233648 - 51233582
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactg 96  Q
    |||||| ||||||||||||| ||||||||| |||| | |||| |||||||  | |||||||||||||    
T  51233648 gtggcacctcacttagggtgccacgtcagcgtagaccaagtccaaattggcttgggggccaaaactg 51233582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 2181278 - 2181233
Alignment:
Q  38 tcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt 83  Q
    |||||||||||| |||||||||||||| | | ||||||||||||||    
T  2181278 tcacttagggtgacacgtcagcatagaccaaatcaaaattggtctt 2181233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 6033780 - 6033825
Alignment:
Q  51 cacgtcagcatagatcgagtcaaaattggtcttggggccaaaactg 96  Q
    ||||||||| | || ||||||||||||||||| |||||||||||||    
T  6033780 cacgtcagcgttgaccgagtcaaaattggtctaggggccaaaactg 6033825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 11824383 - 11824443
Alignment:
Q  72 aaaattggtcttg--gggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||||| || | |||||||    
T  11824383 aaaattggtcttgcagggccaaaactactacagttgcaaaacttagggggcgaatttgtag 11824443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 18937353 - 18937320
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttaggg 117  Q
    ||||||||||||||||||| ||||||||||||||    
T  18937353 ggggccaaaactgctacagttgcaaaacttaggg 18937320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 21871491 - 21871458
Alignment:
Q  85 gggccaaaactgctacagatgcaaaacttaggga 118  Q
    |||||||||||||||||| |||||||||||||||    
T  21871491 gggccaaaactgctacagttgcaaaacttaggga 21871458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 118
Target Start/End: Complemental strand, 21927352 - 21927319
Alignment:
Q  85 gggccaaaactgctacagatgcaaaacttaggga 118  Q
    |||||||||||||||||| |||||||||||||||    
T  21927352 gggccaaaactgctacagttgcaaaacttaggga 21927319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 29697787 - 29697836
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    ||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  29697787 caaaatcgcaacttcatgaaagttaggaggtgaaaactgctattaagcct 29697836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 42526102 - 42526155
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaat 76  Q
    |||||| |||||| ||||||||||||||||||||||  ||||  ||||||||||    
T  42526102 ataacacgtggcacctcacttagggtgtcacgtcagtgtagactgagtcaaaat 42526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 2654067 - 2654035
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagg 116  Q
    ||||||||||||||||||| |||||||||||||    
T  2654067 ggggccaaaactgctacagttgcaaaacttagg 2654035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 4411493 - 4411537
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||||||||||||||||||| ||||||| | ||||||| ||||||    
T  4411493 aaaatcgcaacttcgtgaaaattagggggcgaaaactgttattaa 4411537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 4796323 - 4796355
Alignment:
Q  167 aagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||| ||||||||||||||||||||||    
T  4796323 aagttagggggctaaaactgctattaagcctaa 4796355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 5344438 - 5344370
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  5344438 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 5344370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 7666343 - 7666411
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||| ||||||||| | || |||||||| | |||||| |||| ||||||||||    
T  7666343 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggtctgggggtccaaaactgc 7666411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 7705758 - 7705658
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| || |||||| | ||||||||||| | ||| || |||| |||||||||| | |||  |||||| ||||| || |||||||    
T  7705758 gtggcacctcacttagggtgccatgtcagcgttgatcgagtcaacaatggactgggggtccaaaactgccaaagaatcaaaacatagggggctattttgt 7705659  T
Q  129 a 129  Q
    |    
T  7705658 a 7705658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 8144383 - 8144439
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    ||||||||||||||||  |||||| |||||  ||||||||||||| ||| |||||||    
T  8144383 ttagggggtcaaaatcataacttcttgaaacataggggactaaaattgcaattaagc 8144439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 20472717 - 20472617
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||||||||| || |||||||| | ||| || |||| |||||| ||| | |||  |||||| ||||| || |||||||    
T  20472717 gtggcacctcacttagggtgccacgtcagcattgaccgagtcaacaatggactgggggtccaaaaatgccaaagaatcaaaacatagggggctattttgt 20472618  T
Q  129 a 129  Q
    |    
T  20472617 a 20472617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 29775511 - 29775471
Alignment:
Q  47 gtgtcacgtcagcatagatcgagtcaaaattggtcttgggg 87  Q
    ||||||||||||||| || ||||||||||||||||| ||||    
T  29775511 gtgtcacgtcagcattgaccgagtcaaaattggtctagggg 29775471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 41148222 - 41148162
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    ||||||||  ||||||| |||||| |||||  |||||| | ||||||||||||||||||||    
T  41148222 ttagggggctaaaatcggaacttcttgaaacatagggggccaaaactgctattaagcctaa 41148162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 49185815 - 49185870
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaag 194  Q
    ||||||||| |||||||||||||| ||||||||| ||||   |||||||||||||||    
T  49185815 cttagggggccaaaatcgcaactttgtgaaagtt-gggggtgaaaactgctattaag 49185870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 52045857 - 52045929
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||||||||||||||||| ||||| ||| | || |||||||| | ||| || |||| ||||||||||    
T  52045857 acatgtggcatctcacttagggtgccacgttagcgttgaccgagtcaacaatggactgggggtccaaaactgc 52045929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 54216098 - 54216170
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  54216098 acatgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 54216170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 55586788 - 55586716
Alignment:
Q  26 acatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||||||| ||||||||||||| ||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  55586788 acatgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 55586716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 198
Target Start/End: Original strand, 2907 - 3073
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    ||||||||||| ||||||||||||||||   ||||  |||||||||||||  |||||||||||||||  ||| ||||||||||||  | ||| |||| ||    
T  2907 gtggcatctcatttagggtgtcacgtcaaagtagactgagtcaaaattggctttggggccaaaactgtcacatatgcaaaacttaaagggcagtttttta 3006  T
Q  130 gnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    |       ||||  |||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||    
T  3007 gtttttttctta--gggtcaaaatcgcaactttgagaaagttagggaactaaaactgctattaatccta 3073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 2879 - 2819
Alignment:
Q  72 aaaattggtcttgggg--ccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||||||||||||||  ||||||||||||||| || |||| |||||| ||| ||||||||    
T  2879 aaaattggtcttggggagccaaaactgctacagttgtaaaatttagggggcagttttgtag 2819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 145528 - 145364
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| ||||||||||||  || |||||| |||| |||||||||||||| ||| |||||||||||||| |||||||||||| ||| || ||     
T  145528 ataacacgtggcacctcacttagggttccatgtcagcctagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaatttaaggggcg 145429  T
Q  122 attttgtag-nnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaact 185  Q
      |||||||        ||||||||| |||||||||||||| | |||||||||||||||||||||    
T  145428 gctttgtagttttttttcttaggggggcaaaatcgcaactttgagaaagttaggggactaaaact 145364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 145556 - 145602
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    |||| |||||||||||||  |||||||||||||||||| ||||||||    
T  145556 ggggacaaaactgctacaattgcaaaacttagggagcagttttgtag 145602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 77036 - 76942
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttaggg 117  Q
    |||||| ||| || ||||||||||||| ||||||||| |||| |||||||||||||| ||||||| ||||||||| ||| |||||||||||||||    
T  77036 ataacacgtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggcaaaactgccacaaatgcaaaacttaggg 76942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 46189 - 46075
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn-cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaa 182  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||||        |||||||||| |||||||||||||||||||||||||||| | |||    
T  46189 ggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtttcttttcttagggggttaaaatcgcaacttcgtgaaagttagggggcgaaa 46090  T
Q  183 actgctattaagcct 197  Q
    |||||||| ||||||    
T  46089 actgctataaagcct 46075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 46214 - 46321
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| || || |||||||||||||| ||||||||| ||||  ||||||||||||  ||| |||||||||||||  ||||||||||||||||| | |||    
T  46214 ataacacgtagcgtctcacttagggtgccacgtcagcgtagactgagtcaaaattgaccttgggggccaaaactgtcacagatgcaaaacttagagggca 46313  T
Q  122 attttgta 129  Q
     |||||||    
T  46314 gttttgta 46321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 193
Target Start/End: Complemental strand, 564 - 405
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagcaattttgtag--nnn 133  Q
    |||| |||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||| ||| ||| ||||||||||| |   ||||||||         
T  564 ctcatttagggtgccacgtcagtatagaccgagtcaaaattggtcttgggggccaaaactgccacatatgtaaaacttagggggtggttttgtagttttt 465  T
Q  134 nnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
        ||||||||| |||||||||||||| | | |||||||||| ||||| ||||||||||    
T  464 ttttcttagggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaa 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 666 - 723
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    ||||||||| ||||||||||||||||| ||||||||| ||| ||||||||||| ||||    
T  666 cttagggggccaaaatcgcaacttcgtaaaagttaggagacgaaaactgctatgaagc 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 197
Target Start/End: Complemental strand, 290 - 123
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgta 129  Q
    |||||| ||||||||||||||||||||||  |||| |||||||||||| | |||| |||||||||||| |||  ||||||| |||||   |  |||||||    
T  290 gtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaaattcgccttgtggccaaaactgccacaagtgcaaaatttaggagacgtttttgta 191  T
Q  130 gnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |       || |||| |  ||||||||||||| | |||||||||| | ||||||||||||||||||||    
T  190 gtttttatctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcct 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 9586 - 9415
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaactgctacagatgcaaaacttagggagca 121  Q
    |||||| |||||| |||| ||| | |||||||||||| |||| |||||||||||||| ||| ||||| |||||||| ||| |||||||||||||||  |     
T  9586 ataacacgtggcacctcatttaagatgtcacgtcagcctagaccgagtcaaaattggccttgggggctaaaactgccacatatgcaaaacttaggggacg 9487  T
Q  122 attttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
     ||||||||       ||||| |||  |||||| |||||| | |||| ||||||| ||||||||||||||||    
T  9486 gttttgtagtttttttcttagagggcaaaaatcacaactttgggaaaattagggggctaaaactgctattaa 9415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 3245 - 3157
Alignment:
Q  28 atgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttg-gggccaaaactgctacagatgcaaaacttag 115  Q
    |||||||||||||||||||||| ||||||||| |||| |||||||||||||  |||| ||||||||| ||| ||| |||||||||||||    
T  3245 atgtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttag 3157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 9703 - 9779
Alignment:
Q  50 tcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaatttt 126  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||| || ||||||||| |||||| || |||||    
T  9703 tcacgtcagcgtagaacgagtcaaaattggtcttggggccaaaactgccaccgatgcaaaatttagggggcgatttt 9779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 25047 - 25146
Alignment:
Q  31 tggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggggccaaaactgctacagatgcaaaacttagggagcaattttgtag 130  Q
    ||||| ||||||||| ||| |||||||||  ||||||||||||||||||| |||||||||||||| |  || ||||||||||||||| ||  ||||||||    
T  25047 tggcacctcacttagagtgccacgtcagcgaagatcgagtcaaaattggttttggggccaaaactaccgcatatgcaaaacttagggggcggttttgtag 25146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 24941 - 24900
Alignment:
Q  148 caaaatcgcaacttcgtgaaagttaggggactaaaactgcta 189  Q
    |||||||| |||||||| ||||||||||||| ||||||||||    
T  24941 caaaatcgtaacttcgtaaaagttaggggacgaaaactgcta 24900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 20074 - 19995
Alignment:
Q  37 ctcacttagggtgtcacgtcagcatagatcgagtcaaaattgg-tcttggggccaaaactgctacagatgcaaaacttag 115  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||| | | |||||||||||||| |||||||||||||||||    
T  20074 ctcacttagggtgccacgttagcgtagatcgagtcaaaattggctttgggggccaaaactgccacagatgcaaaacttag 19995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 1529 - 1469
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  1529 cttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagccta 1469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 3697 - 3637
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 3697 - 3637
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 9537 - 9653
Alignment:
Q  84 ggggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnn--cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaa 181  Q
    ||||| ||||||||||||| |||||||||||||| || |||| ||||         |||||||| |||||||||||||||||||||||||||| |   ||    
T  9537 ggggctaaaactgctacagttgcaaaacttagggggcgatttggtagtttttttttcttaggggatcaaaatcgcaacttcgtgaaagttaggaggtgaa 9636  T
Q  182 aactgctattaagccta 198  Q
    |||||||||||| ||||    
T  9637 aactgctattaaaccta 9653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 9511 - 9439
Alignment:
Q  24 taacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtctt-ggggccaaaact 95  Q
    ||||| ||| || |||||||||| || ||||||||| |||| ||||||||||||| |||| ||||||||||||    
T  9511 taacacgtgacacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgatcttgggggccaaaact 9439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 21831 - 21738
Alignment:
Q  23 ataacatgtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttggg-gccaaaactgctacagatgcaaaacttag 115  Q
    |||||| ||| || ||||||| ||||| ||||||||| |||| ||||||||||||||| |||||  |||||||||| | ||| |||||||||||    
T  21831 ataacacgtgacaactcacttggggtgccacgtcagcgtagaccgagtcaaaattggttttgggaaccaaaactgccatagaggcaaaacttag 21738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 21913 - 21974
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||| |||| ||||||||||||  | | ||||||||||||| ||||||||||||||||||||    
T  21913 cttaaggggccaaaatcgcaacagcataaaagttaggggacgaaaactgctattaagcctaa 21974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 6117 - 6061
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||||||||||||| |||||||||||||||||| || | |||||| |||||||||    
T  6117 ttagggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaagc 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 19600 - 19652
Alignment:
Q  141 agggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaa 193  Q
    |||||| |||||||||||||| |  ||||||||||||||||||||||||||||    
T  19600 agggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 19150 - 19038
Alignment:
Q  86 ggccaaaactgctacagatgcaaaacttagggagcaattttgtagnnnnnnncttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaact 185  Q
    ||||||| ||||||| | ||||||||||||||  |  ||||||||       ||||||| | | ||||| ||||||||||||||||| ||| | ||||||    
T  19150 ggccaaatctgctacggttgcaaaacttaggggacggttttgtagtttttttcttagggagccgaaatcacaacttcgtgaaagttaaggggcgaaaact 19051  T
Q  186 gctattaagccta 198  Q
     ||||||||||||    
T  19050 actattaagccta 19038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 6698 - 6748
Alignment:
Q  149 aaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcctaa 199  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  6698 aaaatcgcaacttgttgaaacttagggggctaaaactgctattaagcctaa 6748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 37837 - 37783
Alignment:
Q  143 ggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||||||||||||||| ||| | ||||||| ||||||||||| ||||||||    
T  37837 ggggtcaaaatcgcaacttcctgatacttagggggctaaaactgctgttaagcct 37783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 405450 - 405509
Alignment:
Q  138 cttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagccta 198  Q
    ||||||||||||||||||||||||| ||||| || |||   ||||||||||||||||||||    
T  405450 cttagggggtcaaaatcgcaacttcttgaaactt-gggagttaaaactgctattaagccta 405509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 405118 - 405067
Alignment:
Q  146 gtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagcct 197  Q
    |||||||||  |||||| | ||| ||||||||||||||||||||||||||||    
T  405118 gtcaaaatcataacttcttaaaacttaggggactaaaactgctattaagcct 405067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 3873 - 3773
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgctacagatgcaaaacttagggagcaattttgt 128  Q
    |||||| ||||||||||||| ||||||||||| || |||||||| | ||| || |||| |||||| ||| | |||  |||||| ||||| || |||||||    
T  3873 gtggcacctcacttagggtgccacgtcagcattgaccgagtcaacaatggactgggggtccaaaaatgccaaagaatcaaaacatagggggctattttgt 3774  T
Q  129 a 129  Q
    |    
T  3773 a 3773  T

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Target: scaffold0286 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 17695 - 17639
Alignment:
Q  139 ttagggggtcaaaatcgcaacttcgtgaaagttaggggactaaaactgctattaagc 195  Q
    |||||| ||||||||||||||||| ||| | | ||||| | ||||||||||||||||    
T  17695 ttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagc 17639  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 79158 - 79090
Alignment:
Q  30 gtggcatctcacttagggtgtcacgtcagcatagatcgagtcaaaattggtcttgggg-ccaaaactgc 97  Q
    |||||| ||||||||||||||||||||||| | || |||||||| | ||| || |||| ||||||||||    
T  79158 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaacaatggactgggggtccaaaactgc 79090  T

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